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Conserved domains on  [gi|1199862428|ref|YP_009373402|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Periplaneta australasiae]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
8-310 2.19e-153

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 431.50  E-value: 2.19e-153
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428   8 LFIIYILLVIFVMVGVAFLTLLERKVLGYIHIRKGPNKVGFVGILQPFSDAIKLFTKEQTFPFLSNYLCYYFAPIFSLFL 87
Cdd:MTH00193    4 MLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFL 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428  88 ALLVWFVMPYFTGLISFELGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALILLSFVFLIGSYN 167
Cdd:MTH00193   84 SLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFN 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428 168 LTKFYDFQVYIWMIFFTFPLAMVWFTSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFCII 247
Cdd:MTH00193  164 LLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLM 243
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1199862428 248 FLGSDINSLLFYFKLTFISFMFIWVRGTMPRFRYDKLMYLAWKNFLPLSLNYLLFFMGISIYL 310
Cdd:MTH00193  244 FLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
8-310 2.19e-153

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 431.50  E-value: 2.19e-153
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428   8 LFIIYILLVIFVMVGVAFLTLLERKVLGYIHIRKGPNKVGFVGILQPFSDAIKLFTKEQTFPFLSNYLCYYFAPIFSLFL 87
Cdd:MTH00193    4 MLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFL 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428  88 ALLVWFVMPYFTGLISFELGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALILLSFVFLIGSYN 167
Cdd:MTH00193   84 SLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFN 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428 168 LTKFYDFQVYIWMIFFTFPLAMVWFTSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFCII 247
Cdd:MTH00193  164 LLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLM 243
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1199862428 248 FLGSDINSLLFYFKLTFISFMFIWVRGTMPRFRYDKLMYLAWKNFLPLSLNYLLFFMGISIYL 310
Cdd:MTH00193  244 FLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
13-302 2.82e-103

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 304.40  E-value: 2.82e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428  13 ILLVIFVMVGVAFLTLLERKVLGYIHIRKGPNKVGFVGILQPFSDAIKLFTKEQTFPFLSNYLCYYFAPIFSLFLALLVW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428  93 FVMPYFTGLI--SFELGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALILLSFVFLIGSYNLTK 170
Cdd:pfam00146  83 AVIPFGPGLVlaDLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428 171 FYDFQVYIWMIFFTFPLAMVWFTSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFCIIFLG 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1199862428 251 ------SDINSLLFYFKLTFISFMFIWVRGTMPRFRYDKLMYLAWKNFLPLSLNYLLF 302
Cdd:pfam00146 243 gwlgpfPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
4-311 9.67e-96

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 286.26  E-value: 9.67e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428   4 EIFGLFIIYILLVIFVMVGVAFLTLLERKVLGYIHIRKGPNKVGFVGILQPFSDAIKLFTKEQTFPFLSNYLCYYFAPIF 83
Cdd:COG1005     7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428  84 SLFLALLVWFVMPYFTGLI--SFELGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALILLSFVF 161
Cdd:COG1005    87 AFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428 162 LIGSYNLTKFYDFQV-YIWMIFFTFPLAMVWFTSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFM 240
Cdd:COG1005   167 LAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428 241 SMLFCIIFLG--------SDINSLL----FYFKLTFISFMFIWVRGTMPRFRYDKLMYLAWKNFLPLSLnYLLFFMGISI 308
Cdd:COG1005   247 SALATTLFLGgwlgpfpiLPLGGLPgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL-VNLVLTAAVV 325

                  ...
gi 1199862428 309 YLF 311
Cdd:COG1005   326 LLF 328
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
8-310 2.19e-153

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 431.50  E-value: 2.19e-153
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428   8 LFIIYILLVIFVMVGVAFLTLLERKVLGYIHIRKGPNKVGFVGILQPFSDAIKLFTKEQTFPFLSNYLCYYFAPIFSLFL 87
Cdd:MTH00193    4 MLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFL 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428  88 ALLVWFVMPYFTGLISFELGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALILLSFVFLIGSYN 167
Cdd:MTH00193   84 SLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFN 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428 168 LTKFYDFQVYIWMIFFTFPLAMVWFTSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFCII 247
Cdd:MTH00193  164 LLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLM 243
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1199862428 248 FLGSDINSLLFYFKLTFISFMFIWVRGTMPRFRYDKLMYLAWKNFLPLSLNYLLFFMGISIYL 310
Cdd:MTH00193  244 FLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
8-308 1.12e-131

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 376.68  E-value: 1.12e-131
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428   8 LFIIYILLVIFVMVGVAFLTLLERKVLGYIHIRKGPNKVGFVGILQPFSDAIKLFTKEQTFPFLSNYLCYYFAPIFSLFL 87
Cdd:MTH00225    3 FLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLIL 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428  88 ALLVWFVMPYFTGLISFELGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALILLSFVFLIGSYN 167
Cdd:MTH00225   83 SLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTYN 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428 168 LTKFYDFQVYIWMIFFTFPLAMVWFTSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFCII 247
Cdd:MTH00225  163 LFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSIL 242
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1199862428 248 FLGS--DINSLLFYFKLTFISFMFIWVRGTMPRFRYDKLMYLAWKNFLPLSLNYLLFFMGISI 308
Cdd:MTH00225  243 FFGGffVTIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
6-307 1.65e-125

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 361.11  E-value: 1.65e-125
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428   6 FGLFIIYILLVIFVMVGVAFLTLLERKVLGYIHIRKGPNKVGFVGILQPFSDAIKLFTKEQTFPFLSNYLCYYFAPIFSL 85
Cdd:MTH00143    1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428  86 FLALLVWFVMPYFTGLISFELGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALILLSFVFLIGS 165
Cdd:MTH00143   81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428 166 YNLTKFYDFQVYIWMIFFTFPLAMVWFTSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFC 245
Cdd:MTH00143  161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1199862428 246 IIFLG-----SDINSLLFYFKLTFISFMFIWVRGTMPRFRYDKLMYLAWKNFLPLSLNYLLFFMGIS 307
Cdd:MTH00143  241 VLFFGgssvlFLLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVLV 307
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
13-311 5.94e-121

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 349.96  E-value: 5.94e-121
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428  13 ILLVIFVMVGVAFLTLLERKVLGYIHIRKGPNKVGFVGILQPFSDAIKLFTKEQTFPFLSNYLCYYFAPIFSLFLALLVW 92
Cdd:MTH00111   12 LLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLALTIW 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428  93 FVMPYFTGLISFELGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALILLSFVFLIGSYNLTKFY 172
Cdd:MTH00111   92 TPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTLQTLA 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428 173 DFQVYIWMIFFTFPLAMVWFTSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFCIIFLGSD 252
Cdd:MTH00111  172 TTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILFLNPS 251
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1199862428 253 INSL---LFYF----KLTFISFMFIWVRGTMPRFRYDKLMYLAWKNFLPLSLNYLLFFMGISIYLF 311
Cdd:MTH00111  252 TLNLppeLFTInlmtKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLA 317
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
8-310 1.88e-118

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 343.53  E-value: 1.88e-118
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428   8 LFIIYILLVIF-VMVGVAFLTLLERKVLGYIHIRKGPNKVGFVGILQPFSDAIKLFTKEQTFPFLSNYLCYYFAPIFSLF 86
Cdd:MTH00104    1 MFMINILLLIIpILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428  87 LALLVWFVMPYFTGLISFELGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALILLSFVFLIGSY 166
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428 167 NLTKFYDFQVYIWMIFFTFPLAMVWFTSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFCI 246
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1199862428 247 IFLGS-------DINSLLFYFKLTFISFMFIWVRGTMPRFRYDKLMYLAWKNFLPLSLNYLLFFMGISIYL 310
Cdd:MTH00104  241 LFLGAfhnpympELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMT 311
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
5-313 4.68e-117

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 340.06  E-value: 4.68e-117
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428   5 IFGLFIIYILLVIFVMVGVAFLTLLERKVLGYIHIRKGPNKVGFVGILQPFSDAIKLFTKEQTFPFLSNYLCYYFAPIFS 84
Cdd:MTH00071    4 LISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMA 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428  85 LFLALLVWFVMPYFTGLISFELGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALILLSFVFLIG 164
Cdd:MTH00071   84 LTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTG 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428 165 SYNLTKFYDFQVYIWMIFFTFPLAMVWFTSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLF 244
Cdd:MTH00071  164 GFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLS 243
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1199862428 245 CIIFLGSDIN-------SLLFYFKLTFISFMFIWVRGTMPRFRYDKLMYLAWKNFLPLSLNYLLFFMGISIYLFFL 313
Cdd:MTH00071  244 TILFLGSTYNhlqpelsTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGI 319
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
8-310 7.48e-116

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 336.50  E-value: 7.48e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428   8 LFIIYILLVIFVMVGVAFLTLLERKVLGYIHIRKGPNKVGFVGILQPFSDAIKLFTKEQTFPFLSNYLCYYFAPIFSLFL 87
Cdd:MTH00218    4 SLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTL 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428  88 ALLVWFVMPYFTGLISFELGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALILLSFVFLIGSYN 167
Cdd:MTH00218   84 ALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFS 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428 168 LTKFYDFQVYIWMIFFTFPLAMVWFTSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFCII 247
Cdd:MTH00218  164 LEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVIL 243
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1199862428 248 FLGSDINSLLFYFKLTFISFMFIWVRGTMPRFRYDKLMYLAWKNFLPLSLNYLLFFMGISIYL 310
Cdd:MTH00218  244 FLGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSF 306
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
1-310 3.60e-114

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 332.73  E-value: 3.60e-114
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428   1 MFKEIFGLFIIYILLVIFVMVGVAFLTLLERKVLGYIHIRKGPNKVGFVGILQPFSDAIKLFTKEQTFPFLSNYLCYYFA 80
Cdd:MTH00134    1 MLSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428  81 PIFSLFLALLVWFVMPYFTGLISFELGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALILLSFV 160
Cdd:MTH00134   81 PMLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVI 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428 161 FLIGSYNLTKFYDFQVYIWMIFFTFPLAMVWFTSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFM 240
Cdd:MTH00134  161 IFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLM 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1199862428 241 SMLFCIIFLGS-------DINSLLFYFKLTFISFMFIWVRGTMPRFRYDKLMYLAWKNFLPLSLNYLLFFMGISIYL 310
Cdd:MTH00134  241 NTLSAILFLGAshiptlpELTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAF 317
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
8-312 1.24e-107

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 315.53  E-value: 1.24e-107
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428   8 LFIIYILLVIF-VMVGVAFLTLLERKVLGYIHIRKGPNKVGFVGILQPFSDAIKLFTKEQTFPFLSNYLCYYFAPIFSLF 86
Cdd:MTH00195    3 ISVIHFLIQIVpVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALA 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428  87 LALLVWFVMPYFTGLISFELGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALILLSFVFLIGSY 166
Cdd:MTH00195   83 LALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSF 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428 167 NLTKFYDFQVYIWMIFFTFPLAMVWFTSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFCI 246
Cdd:MTH00195  163 DFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTI 242
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1199862428 247 IFLGSDiNSLLFYFKLTFISFMFIWVRGTMPRFRYDKLMYLAWKNFLPLSLNYLLFFMGISIYLFF 312
Cdd:MTH00195  243 LFLGGG-GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFALNS 307
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
8-314 2.15e-106

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 313.07  E-value: 2.15e-106
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428   8 LFIIYILLVIFVMVGVAFLTLLERKVLGYIHIRKGPNKVGFVGILQPFSDAIKLFTKEQTFPFLSNYLCYYFAPIFSLFL 87
Cdd:MTH00040    6 FLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFL 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428  88 ALLVWFVMPYFTGLISFELGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALILLSFVFLIGSYN 167
Cdd:MTH00040   86 ALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFS 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428 168 LTKFYDFQVYIWMIFFTFPLAMVWFTSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFCII 247
Cdd:MTH00040  166 LSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVIL 245
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1199862428 248 FLGSD--------INSLLFYFKLTFISFMFIWVRGTMPRFRYDKLMYLAWKNFLPLSLNYLLFFMGISIYLFFLL 314
Cdd:MTH00040  246 FLGGGspfneifpINIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNILP 320
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
9-306 5.73e-104

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 306.71  E-value: 5.73e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428   9 FIIYILLVIFVMVGVAFLTLLERKVLGYIHIRKGPNKVGFVGILQPFSDAIKLFTKEQTFPFLSNYLCYYFAPIFSLFLA 88
Cdd:MTH00010    6 FISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILA 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428  89 LLVWFVMPYFTGLISFELGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALILLSFVFLIGSYNL 168
Cdd:MTH00010   86 LLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSF 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428 169 TKFYDFQvYIWMIFFTFPLAMVWFTSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFCIIF 248
Cdd:MTH00010  166 SKIIMSQ-YSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFF 244
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1199862428 249 LGSD----INSLLFYFKLTFISFMFIWVRGTMPRFRYDKLMYLAWKNFLPLSLNYLLFFMGI 306
Cdd:MTH00010  245 TSFIpsifISDLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPI 306
NADHdh pfam00146
NADH dehydrogenase;
13-302 2.82e-103

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 304.40  E-value: 2.82e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428  13 ILLVIFVMVGVAFLTLLERKVLGYIHIRKGPNKVGFVGILQPFSDAIKLFTKEQTFPFLSNYLCYYFAPIFSLFLALLVW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428  93 FVMPYFTGLI--SFELGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALILLSFVFLIGSYNLTK 170
Cdd:pfam00146  83 AVIPFGPGLVlaDLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428 171 FYDFQVYIWMIFFTFPLAMVWFTSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFCIIFLG 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1199862428 251 ------SDINSLLFYFKLTFISFMFIWVRGTMPRFRYDKLMYLAWKNFLPLSLNYLLF 302
Cdd:pfam00146 243 gwlgpfPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
4-311 9.67e-96

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 286.26  E-value: 9.67e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428   4 EIFGLFIIYILLVIFVMVGVAFLTLLERKVLGYIHIRKGPNKVGFVGILQPFSDAIKLFTKEQTFPFLSNYLCYYFAPIF 83
Cdd:COG1005     7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428  84 SLFLALLVWFVMPYFTGLI--SFELGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALILLSFVF 161
Cdd:COG1005    87 AFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428 162 LIGSYNLTKFYDFQV-YIWMIFFTFPLAMVWFTSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFM 240
Cdd:COG1005   167 LAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428 241 SMLFCIIFLG--------SDINSLL----FYFKLTFISFMFIWVRGTMPRFRYDKLMYLAWKNFLPLSLnYLLFFMGISI 308
Cdd:COG1005   247 SALATTLFLGgwlgpfpiLPLGGLPgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL-VNLVLTAAVV 325

                  ...
gi 1199862428 309 YLF 311
Cdd:COG1005   326 LLF 328
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
7-308 1.06e-94

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 283.54  E-value: 1.06e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428   7 GLFIIYILLVIF-VMVGVAFLTLLERKVLGYIHIRKGPNKVGFVGILQPFSDAIKLFTKEQTFPFLSNYLCYYFAPIFSL 85
Cdd:MTH00054    2 GIIIIKILAILVpLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSL 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428  86 FLALLVWFVMPYFTG--LISFELGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALILLSFVFLI 163
Cdd:MTH00054   82 TLAFIAWGVIPYGEGvvLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCV 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428 164 GSYNLTKFYDFQVYIWMIFFTFPLAMVWFTSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSML 243
Cdd:MTH00054  162 GSLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTF 241
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1199862428 244 FCIIFLG----------SDINSLLFYFKLTFISFMFIWVRGTMPRFRYDKLMYLAWKNFLPLSLNYLLFFMGISI 308
Cdd:MTH00054  242 GVILFLGgwlvisgptsYFSNFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILI 316
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
1-306 1.03e-92

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 278.54  E-value: 1.03e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428   1 MFKEIFGLFIIYILLVIFVMVGVAFLTLLERKVLGYIHIRKGPNKVGFVGILQPFSDAIKLFTKEQTFPFLSNYLCYYFA 80
Cdd:MTH00216    1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428  81 PIFSLFLALLVWFVMPYFTG-LIS-FELGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALILLS 158
Cdd:MTH00216   81 PVLSFTLALIVWGVIPYERGvLISdFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428 159 FVFLIGSYNLTKFYDFQV-YIWMIFFTFPLAMVWFTSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASI 237
Cdd:MTH00216  161 VLLCVGSLSITEIVLAQNnGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1199862428 238 LFMSMLFCIIFLGS--------DINSLLFYFKLTFISFMFIWVRGTMPRFRYDKLMYLAWKNFLPLSLNYLLFFMGI 306
Cdd:MTH00216  241 ILMSCLTTILFLGGwlspikyfKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASV 317
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
5-297 1.38e-89

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 270.14  E-value: 1.38e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428   5 IFGLFIIYILLVIFVMVGVAFLTLLERKVLGYIHIRKGPNKVGFVGILQPFSDAIKLFTKEQTFPFLSNYLCYYFAPIFS 84
Cdd:PRK06076    9 LLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIA 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428  85 LFLALLVWFVMPYFTGLI--SFELGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALILLSFVFL 162
Cdd:PRK06076   89 FIPAFLAWAVIPFGPELViaDLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLL 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428 163 IGSYNLTKFYDFQVYIWMIFFTFPLAMVWFTSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSM 242
Cdd:PRK06076  169 AGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSA 248
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1199862428 243 LFCIIFLG----------SDINSLLFYFKLTFISFMFIWVRGTMPRFRYDKLMYLAWKNFLPLSL 297
Cdd:PRK06076  249 LITTLFLGgwlppfplggGIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
14-308 3.87e-74

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 231.44  E-value: 3.87e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428  14 LLVIFV--MVGVAFLTLLERKVLGYIHIRKGPNKVGFVGILQPFSDAIKLFTKEQTFPFLSNYLCYYFAPIFSLFLALLV 91
Cdd:MTH00029   13 LLIIFVplLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILA 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428  92 WFVMPYFTG--LISFELGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALILLSFVFLIGSYNLT 169
Cdd:MTH00029   93 WAIVTMDQGvfLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNIS 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428 170 KFYDFQVYIWMIFFTFPLAMVWFTSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFCIIFL 249
Cdd:MTH00029  173 EIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIFFL 252
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428 250 G-----------------------SDINSLLFYFKLTFISFMFIWVRGTMPRFRYDKLMYLAWKNFLPLSLNYLLFFMGI 306
Cdd:MTH00029  253 GgwlspldgiptppeafsifeqiaSSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTAGI 332

                  ..
gi 1199862428 307 SI 308
Cdd:MTH00029  333 LI 334
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
13-308 5.34e-66

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 208.60  E-value: 5.34e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428  13 ILLVIFVMVGVAFLTLLERKVLGYIHIRKGPNKVGFVGILQPFSDAIKLFTKEQTFPFLSNYLCYYFAPIFSLFLALLVW 92
Cdd:MTH00090    3 LLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEW 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428  93 FVMPYFTGLISFELGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALILLSFVFLIGSYNLTKFY 172
Cdd:MTH00090   83 FVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVSSF 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428 173 DFqvyiWMIFFTFPlamvWFTSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFCIIFLGsd 252
Cdd:MTH00090  163 SL----SLFVIYLP----FLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK-- 232
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1199862428 253 inslLFYFKLTFISFMFIWVRGTMPRFRYDKLMYLAWKNFLPLSLNYLLFFMGISI 308
Cdd:MTH00090  233 ----FSFLMLFLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
9-303 3.36e-50

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 168.18  E-value: 3.36e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428   9 FIIYILLVIFVMVGVAFLTLLERKVLGYIHIRKGPNKVGFVGILQPFSDAIKLFTKEQTFPFLSNYLCYYFAPIFSLFLA 88
Cdd:MTH00058    4 LVSGLEGLLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLV 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428  89 LLVWFVMPYFTGLISFELGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALILLSFVFLIGSYNL 168
Cdd:MTH00058   84 VFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSL 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428 169 tkfYDFQVYIWMIFFTFPLA-MVWFTSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFCII 247
Cdd:MTH00058  164 ---VDFYYSGWLSVLLFPLIyILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVL 240
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1199862428 248 FLGSDINSLLFYFKLtfisFMFIWVRGTMPRFRYDKLMYLAWKNFLPLSLNYLLFF 303
Cdd:MTH00058  241 FFGGGFVSIMLLFHL----LFFMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVI 292
ndhA CHL00032
NADH dehydrogenase subunit 1
2-301 2.77e-38

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 138.93  E-value: 2.77e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428   2 FKEIFGLFIIYI---LLVIFVMVGVAFLTLLERKVLGYIHIRKGPNKVGFVGILQPFSDAIKLFTKEQTFPFLSNYLCYY 78
Cdd:CHL00032   20 LKEVYGLIWILVpilTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFS 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428  79 FAPIFSLFLALLVWFVMPYFTGLI--SFELGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALIL 156
Cdd:CHL00032  100 IGPSIAVISILLSYLVIPFGYHLVlaDLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCV 179
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428 157 LSFVFLIGSYNLTKFYDFQ----VYIWMIFFTFPLAMVWFTSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLA 232
Cdd:CHL00032  180 LSISLLSNSLSTVDIVEAQskygFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVA 259
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428 233 EYASILFMSMLFCIIFLGSDINSLLFYFKLTFIS-----------------------FMFIWV--RGTMPRFRYDKLMYL 287
Cdd:CHL00032  260 SYLNLLVSSLFVTVLYLGGWNLSIPYIFIPELFEinktggvfgttigifitlaktylFLFISIttRWTLPRLRMDQLLNL 339
                         330
                  ....*....|....
gi 1199862428 288 AWKNFLPLSLNYLL 301
Cdd:CHL00032  340 GWKFLLPISLGNLL 353
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
6-304 2.46e-29

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 113.74  E-value: 2.46e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428   6 FGLFIIYILLVIFVMVGVAFLTLLERKVLGYIHIRKGPnkvgfvGILQPFSDAIKLFTKEQTFPFLSNYLcYYFAPIFSL 85
Cdd:COG0650     1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASWL-FRAAPYVAL 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428  86 FLALLVWFVMPYFT--GLISFELGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALILLSFVFLI 163
Cdd:COG0650    74 AAMLLAALLVPVLTtgPPLSFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLA 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428 164 GSYNLTKFYDFQVY--IWMIFFTFPLAMV-WFTSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFM 240
Cdd:COG0650   154 GSTSLSDIVAYQAAhgPLLLSPSLLLAAIaFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVL 233
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862428 241 SMLFCIIFLG------SDINSLLFYFKLTFISFMFIWVRGTMPRFRYDKLMYLAWKNFLPLSLNYLLFFM 304
Cdd:COG0650   234 LSLFVNLFLPwgialtLLLALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAVL 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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