|
Name |
Accession |
Description |
Interval |
E-value |
| ND3 |
MTH00106 |
NADH dehydrogenase subunit 3; Provisional |
1-115 |
1.55e-60 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177168 [Multi-domain] Cd Length: 115 Bit Score: 180.91 E-value: 1.55e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236517326 1 MNLPLTLMIDIILVMVLVTIAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQ 80
Cdd:MTH00106 1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
|
90 100 110
....*....|....*....|....*....|....*
gi 1236517326 81 SNNLKITVAMALMLIIILALGLIYEWLQKGLEWEE 115
Cdd:MTH00106 81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
|
|
| ND3 |
MTH00136 |
NADH dehydrogenase subunit 3; Provisional |
1-115 |
1.28e-45 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177194 [Multi-domain] Cd Length: 116 Bit Score: 143.14 E-value: 1.28e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236517326 1 MNLPLT-LMIDIILVMVLVTIAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAT 79
Cdd:MTH00136 1 MNLITTiLTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80
|
90 100 110
....*....|....*....|....*....|....*.
gi 1236517326 80 QSNNLKITVAMALMLIIILALGLIYEWLQKGLEWEE 115
Cdd:MTH00136 81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
|
|
| ND3 |
MTH00069 |
NADH dehydrogenase subunit 3; Provisional |
3-115 |
6.41e-43 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177141 [Multi-domain] Cd Length: 114 Bit Score: 136.28 E-value: 6.41e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236517326 3 LPLTLMIDIILVMVLVTIAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQSN 82
Cdd:MTH00069 2 IMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLN 81
|
90 100 110
....*....|....*....|....*....|...
gi 1236517326 83 NLKITVAMALMLIIILALGLIYEWLQKGLEWEE 115
Cdd:MTH00069 82 TPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
|
|
| ND3 |
MTH00113 |
NADH dehydrogenase subunit 3; Provisional |
1-113 |
4.56e-39 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177175 [Multi-domain] Cd Length: 114 Bit Score: 126.53 E-value: 4.56e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236517326 1 MNLPLTLMIDIILVMVLVTIAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQ 80
Cdd:MTH00113 1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80
|
90 100 110
....*....|....*....|....*....|...
gi 1236517326 81 SNNLKITVAMALMLIIILALGLIYEWLQKGLEW 113
Cdd:MTH00113 81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEW 113
|
|
| ND3 |
MTH00042 |
NADH dehydrogenase subunit 3; Validated |
1-115 |
3.45e-34 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 177117 [Multi-domain] Cd Length: 116 Bit Score: 114.31 E-value: 3.45e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236517326 1 MNLPLTLMIDIILVMVLVTIAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQ 80
Cdd:MTH00042 2 TNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATL 81
|
90 100 110
....*....|....*....|....*....|....*
gi 1236517326 81 SNNLKITVAMALMLIIILALGLIYEWLQKGLEWEE 115
Cdd:MTH00042 82 ITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
|
|
| ND3 |
MTH00203 |
NADH dehydrogenase subunit 3; Provisional |
5-113 |
4.02e-30 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214456 [Multi-domain] Cd Length: 112 Bit Score: 103.82 E-value: 4.02e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236517326 5 LTLMIDIILVMVLVTIAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQSNNl 84
Cdd:MTH00203 6 LFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLSS- 84
|
90 100
....*....|....*....|....*....
gi 1236517326 85 kITVAMALMLIIILALGLIYEWLQKGLEW 113
Cdd:MTH00203 85 -LSLLLAFLFLILLTLGLIYEWLQGGLEW 112
|
|
| Oxidored_q4 |
pfam00507 |
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; |
18-84 |
9.60e-24 |
|
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
Pssm-ID: 459838 [Multi-domain] Cd Length: 94 Bit Score: 87.09 E-value: 9.60e-24
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1236517326 18 VTIAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWATQSNNL 84
Cdd:pfam00507 1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFREL 65
|
|
| ND3 |
MTH00161 |
NADH dehydrogenase subunit 3; Provisional |
5-113 |
4.03e-23 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177217 [Multi-domain] Cd Length: 113 Bit Score: 85.98 E-value: 4.03e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236517326 5 LTLMIDIILVMVLVTIAFWL-PQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQSNN 83
Cdd:MTH00161 4 IILLIILLISIILMILASLLsKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSN 83
|
90 100 110
....*....|....*....|....*....|
gi 1236517326 84 LKITVAMALMLIIILALGLIYEWLQKGLEW 113
Cdd:MTH00161 84 MMSWLITSSFFILILLLGLYYEWNQGALEW 113
|
|
| ND3 |
MTH00148 |
NADH dehydrogenase subunit 3; Provisional |
5-75 |
5.52e-23 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214433 [Multi-domain] Cd Length: 117 Bit Score: 85.68 E-value: 5.52e-23
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1236517326 5 LTLMIDIILVMVLVTIAFWLPQLNMYA-EKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPL 75
Cdd:MTH00148 6 LSLLFALILSPVLLLLGLVLSKRSYSDrEKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPV 77
|
|
| ND3 |
MTH00202 |
NADH dehydrogenase subunit 3; Provisional |
1-113 |
6.52e-23 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214455 [Multi-domain] Cd Length: 117 Bit Score: 85.81 E-value: 6.52e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236517326 1 MNLPLTLMIDIILVMVLVTIAFWL--PQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWA 78
Cdd:MTH00202 1 MLLILFMSILSILISSLLFLVSWMlsFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80
|
90 100 110
....*....|....*....|....*....|....*
gi 1236517326 79 TQSNNLKITVAMALMLIIILALGLIYEWLQKGLEW 113
Cdd:MTH00202 81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDW 115
|
|
| ND3 |
MTH00012 |
NADH dehydrogenase subunit 3; Validated |
1-113 |
1.51e-18 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 164588 [Multi-domain] Cd Length: 117 Bit Score: 74.51 E-value: 1.51e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236517326 1 MNLPLTLMIDIILVMVLVTIAFWLPQLNMYA--EKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWA 78
Cdd:MTH00012 1 MSLMMIPMMISLILPPLVLGAAWVLAARSTAdrEKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80
|
90 100 110
....*....|....*....|....*....|....*
gi 1236517326 79 TQSNNLKITVAMALMLIIILALGLIYEWLQKGLEW 113
Cdd:MTH00012 81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDW 115
|
|
| NuoA |
COG0838 |
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ... |
11-113 |
1.86e-18 |
|
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440600 [Multi-domain] Cd Length: 117 Bit Score: 74.39 E-value: 1.86e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236517326 11 IILVMVLVTIAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWATQSNNLKIT-VA 89
Cdd:COG0838 16 LGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFRELGWFgLI 93
|
90 100
....*....|....*....|....
gi 1236517326 90 MALMLIIILALGLIYEWLQKGLEW 113
Cdd:COG0838 94 EMLVFIAILLVGLIYAWKKGALEW 117
|
|
| ND3 |
MTH00055 |
NADH dehydrogenase subunit 3; Provisional |
5-114 |
1.68e-17 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177128 [Multi-domain] Cd Length: 118 Bit Score: 72.05 E-value: 1.68e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236517326 5 LTLMIDIILVMVLVTIAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWATQSNNL 84
Cdd:MTH00055 10 ILLLFSIGLSTVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFL--FPWCVVYNQI 87
|
90 100 110
....*....|....*....|....*....|.
gi 1236517326 85 KI-TVAMALMLIIILALGLIYEWLQKGLEWE 114
Cdd:MTH00055 88 GLfGFWVMYLFLIILTIGLIYEWVKGGLEWE 118
|
|
| PRK06602 |
PRK06602 |
NADH:ubiquinone oxidoreductase subunit A; Validated |
7-79 |
8.76e-16 |
|
NADH:ubiquinone oxidoreductase subunit A; Validated
Pssm-ID: 180638 [Multi-domain] Cd Length: 121 Bit Score: 67.58 E-value: 8.76e-16
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1236517326 7 LMIDIILVMVLVTIAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAT 79
Cdd:PRK06602 15 LIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAV 85
|
|
| ND3 |
MTH00018 |
NADH dehydrogenase subunit 3; Validated |
1-114 |
1.92e-15 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 164592 [Multi-domain] Cd Length: 113 Bit Score: 66.62 E-value: 1.92e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236517326 1 MNLPLTLMIDIILVMVLVTIAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWATQ 80
Cdd:MTH00018 1 YGLFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFL--FPWCVL 78
|
90 100 110
....*....|....*....|....*....|....*
gi 1236517326 81 SNNLK-ITVAMALMLIIILALGLIYEWLQKGLEWE 114
Cdd:MTH00018 79 YNQIApFGFWTMVGFLFILTLGLIYEWIKGGLEWE 113
|
|
| ND3 |
MTH00030 |
NADH dehydrogenase subunit 3; Provisional |
8-114 |
1.43e-14 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 164603 [Multi-domain] Cd Length: 123 Bit Score: 64.57 E-value: 1.43e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236517326 8 MIDIILVMVLVTIAFWLPQLNMY-----AEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWATQSN 82
Cdd:MTH00030 13 LLGVGIILLLVSISFTLGNSRIGltkpdSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSIVFN 90
|
90 100 110
....*....|....*....|....*....|...
gi 1236517326 83 NLKI-TVAMALMLIIILALGLIYEWLQKGLEWE 114
Cdd:MTH00030 91 QLNLfSFWIVYTFLIVLAIGLAYEWIKGGLEWD 123
|
|
| PRK07928 |
PRK07928 |
NADH dehydrogenase subunit A; Validated |
33-114 |
1.47e-07 |
|
NADH dehydrogenase subunit A; Validated
Pssm-ID: 181171 [Multi-domain] Cd Length: 119 Bit Score: 46.20 E-value: 1.47e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236517326 33 KNNPYECGFDPMGSARLP--FSMKFFLVAITFLLFDLEIALLLPlpWATQSNNLKI-TVAMALMLIIILALGLIYEWLQK 109
Cdd:PRK07928 37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFDALGVfGLVEMALFMLTVFVAYAYVWRRG 114
|
....*
gi 1236517326 110 GLEWE 114
Cdd:PRK07928 115 GLEWD 119
|
|
| PRK07756 |
PRK07756 |
NADH-quinone oxidoreductase subunit A; |
7-113 |
2.21e-07 |
|
NADH-quinone oxidoreductase subunit A;
Pssm-ID: 169084 [Multi-domain] Cd Length: 122 Bit Score: 45.89 E-value: 2.21e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236517326 7 LMIDIILVMVLVTIAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPlpWATQSNNLKI 86
Cdd:PRK07756 16 LLLGILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAVAYDKLGL 93
|
90 100
....*....|....*....|....*...
gi 1236517326 87 TVAMALMLIIILALG-LIYEWLQKGLEW 113
Cdd:PRK07756 94 FALIEMLIFVVMLLVgLAYAWKKKVLQW 121
|
|
| ndhC |
CHL00022 |
NADH dehydrogenase subunit 3 |
7-113 |
2.72e-07 |
|
NADH dehydrogenase subunit 3
Pssm-ID: 176964 [Multi-domain] Cd Length: 120 Bit Score: 45.36 E-value: 2.72e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236517326 7 LMIDIILVMVLVTIAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWATQSNNLKI 86
Cdd:CHL00022 14 LIISSLIPILAFLISGLLAPISKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGV 91
|
90 100
....*....|....*....|....*...
gi 1236517326 87 TVAMALMLIIILALG-LIYEWLQKGLEW 113
Cdd:CHL00022 92 SAFIEALIFVLILIVgLVYAWRKGALEW 119
|
|
| ND3 |
MTH00092 |
NADH dehydrogenase subunit 3; Provisional |
1-73 |
5.68e-07 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177155 Cd Length: 111 Bit Score: 44.50 E-value: 5.68e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1236517326 1 MNLPLTLMIDIILVMVLVTIAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLL 73
Cdd:MTH00092 2 LVLIFVFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFL 74
|
|
| ND3 |
MTH00060 |
NADH dehydrogenase subunit 3; Provisional |
36-76 |
4.10e-04 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177132 Cd Length: 116 Bit Score: 37.18 E-value: 4.10e-04
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 1236517326 36 PYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLP 76
Cdd:MTH00060 40 SFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
|
|
| PRK08489 |
PRK08489 |
NAD(P)H-quinone oxidoreductase subunit 3; |
33-78 |
3.97e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 3;
Pssm-ID: 181448 [Multi-domain] Cd Length: 129 Bit Score: 34.64 E-value: 3.97e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 1236517326 33 KNNPYECGFDPMGSARlPFSMKFFLVAITFLLFDLEIALLlpLPWA 78
Cdd:PRK08489 47 KLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWA 89
|
|
|