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Conserved domains on  [gi|1237408504|ref|YP_009414960|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Cheirogaleus trichotis]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009567)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 6.65e-60

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 179.37  E-value: 6.65e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1237408504   1 MNLPLTLMIDIILALVLVMAAFWLPQLNTYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00106    1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1237408504  81 SMDLKFTVMMALLLIIILALGLIYEWTQKGLEWEE 115
Cdd:MTH00106   81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
 
Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 6.65e-60

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 179.37  E-value: 6.65e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1237408504   1 MNLPLTLMIDIILALVLVMAAFWLPQLNTYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00106    1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1237408504  81 SMDLKFTVMMALLLIIILALGLIYEWTQKGLEWEE 115
Cdd:MTH00106   81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-78 4.01e-23

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 85.55  E-value: 4.01e-23
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1237408504  18 VMAAFWLPQLNTYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWA 78
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWA 59
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 3-113 1.24e-18

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 74.77  E-value: 1.24e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1237408504   3 LPLTLMIDIILALVLVM--AAFWLPQLNTYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQ 80
Cdd:COG0838     6 LPILIFLLVALGLALAMllLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVV 83

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1237408504  81 SMDLKFTVMMALLL-IIILALGLIYEWTQKGLEW 113
Cdd:COG0838    84 FRELGWFGLIEMLVfIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 6.65e-60

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 179.37  E-value: 6.65e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1237408504   1 MNLPLTLMIDIILALVLVMAAFWLPQLNTYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00106    1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1237408504  81 SMDLKFTVMMALLLIIILALGLIYEWTQKGLEWEE 115
Cdd:MTH00106   81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-115 1.06e-45

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 143.52  E-value: 1.06e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1237408504   1 MNLPLT-LMIDIILALVLVMAAFWLPQLNTYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79
Cdd:MTH00136    1 MNLITTiLTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1237408504  80 QSMDLKFTVMMALLLIIILALGLIYEWTQKGLEWEE 115
Cdd:MTH00136   81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 3-115 1.56e-42

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 135.51  E-value: 1.56e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1237408504   3 LPLTLMIDIILALVLVMAAFWLPQLNTYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSM 82
Cdd:MTH00069    2 IMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLN 81

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1237408504  83 DLKFTVMMALLLIIILALGLIYEWTQKGLEWEE 115
Cdd:MTH00069   82 TPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 1-113 2.43e-38

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 124.61  E-value: 2.43e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1237408504   1 MNLPLTLMIDIILALVLVMAAFWLPQLNTYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00113    1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1237408504  81 SMDLKFTVMMALLLIIILALGLIYEWTQKGLEW 113
Cdd:MTH00113   81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEW 113
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-115 3.75e-35

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 116.62  E-value: 3.75e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1237408504   1 MNLPLTLMIDIILALVLVMAAFWLPQLNTYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00042    2 TNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATL 81

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1237408504  81 SMDLKFTVMMALLLIIILALGLIYEWTQKGLEWEE 115
Cdd:MTH00042   82 ITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 5-113 5.29e-29

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 101.13  E-value: 5.29e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1237408504   5 LTLMIDIILALVLVMAAFWLPQLNTYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSMDl 84
Cdd:MTH00203    6 LFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLSS- 84

                          90       100
                  ....*....|....*....|....*....
gi 1237408504  85 kFTVMMALLLIIILALGLIYEWTQKGLEW 113
Cdd:MTH00203   85 -LSLLLAFLFLILLTLGLIYEWLQGGLEW 112
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-78 4.01e-23

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 85.55  E-value: 4.01e-23
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1237408504  18 VMAAFWLPQLNTYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWA 78
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWA 59
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 5-115 1.01e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 85.29  E-value: 1.01e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1237408504   5 LTLMIDIILALVLVMAAFWLPQLNTYA-EKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLpwaSQSMD 83
Cdd:MTH00148    6 LSLLFALILSPVLLLLGLVLSKRSYSDrEKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPV---LQSLG 82

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1237408504  84 LKFTVMMALLLIIILALGLI---YEWTQKGLEWEE 115
Cdd:MTH00148   83 SSFSVWSLTSLFIFLLILILglfHEWNEGSLDWVS 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-113 9.17e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 82.73  E-value: 9.17e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1237408504   1 MNLPLTLMIDIILALVLVMAAFWLPQLNTYA--EKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWA 78
Cdd:MTH00202    1 MLLILFMSILSILISSLLFLVSWMLSFRSLMdrEKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1237408504  79 SQSMDLKFTVMMALLLIIILALGLIYEWTQKGLEW 113
Cdd:MTH00202   81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDW 115
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 1-113 1.18e-21

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 82.13  E-value: 1.18e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1237408504   1 MNLPLTLMIDIILALVLVMAAFWLPQLNTYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1237408504  81 SMDLKFTVMMALLLIIILALGLIYEWTQKGLEW 113
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 5-113 4.43e-20

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 78.36  E-value: 4.43e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1237408504   5 LTLMIDIILALVLVMAAFWLPQLNTY-AEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSMD 83
Cdd:MTH00012    6 IPMMISLILPPLVLGAAWVLAARSTAdREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILMTST 85

                          90       100       110
                  ....*....|....*....|....*....|
gi 1237408504  84 LKFTVMMALLLIIILALGLIYEWTQKGLEW 113
Cdd:MTH00012   86 SKTVVYTSILFLLILVIGLIHEWREGSLDW 115
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 5-114 1.78e-19

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 77.06  E-value: 1.78e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1237408504   5 LTLMIDIILALVLVMAAFWLPQLNTYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSMDL 84
Cdd:MTH00055   10 ILLLFSIGLSTVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGL 89

                          90       100       110
                  ....*....|....*....|....*....|
gi 1237408504  85 kFTVMMALLLIIILALGLIYEWTQKGLEWE 114
Cdd:MTH00055   90 -FGFWVMYLFLIILTIGLIYEWVKGGLEWE 118
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 3-113 1.24e-18

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 74.77  E-value: 1.24e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1237408504   3 LPLTLMIDIILALVLVM--AAFWLPQLNTYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQ 80
Cdd:COG0838     6 LPILIFLLVALGLALAMllLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVV 83

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1237408504  81 SMDLKFTVMMALLL-IIILALGLIYEWTQKGLEW 113
Cdd:COG0838    84 FRELGWFGLIEMLVfIAILLVGLIYAWKKGALEW 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 7-114 1.64e-17

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 71.82  E-value: 1.64e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1237408504   7 LMIDIILALVLVMAAFWLPQLNTYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWA---SQSMD 83
Cdd:PRK06602   15 LIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAvsfREIGW 92

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1237408504  84 LKFTVMMalLLIIILALGLIYEWTQKGLEWE 114
Cdd:PRK06602   93 LGFVEAM--IFILVLLVGLVYLWRKGALDWE 121
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 1-114 2.94e-17

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 71.25  E-value: 2.94e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1237408504   1 MNLPLTLMIDIILALVLVMAAFWLPQLNTYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00018    1 YGLFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYN 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1237408504  81 SMDLkFTVMMALLLIIILALGLIYEWTQKGLEWE 114
Cdd:MTH00018   81 QIAP-FGFWTMVGFLFILTLGLIYEWIKGGLEWE 113
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 31-114 3.54e-14

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 63.41  E-value: 3.54e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1237408504  31 AEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSMDLkFTVMMALLLIIILALGLIYEWTQKG 110
Cdd:MTH00030   41 SEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQLNL-FSFWIVYTFLIVLAIGLAYEWIKGG 119


                  ....
gi 1237408504 111 LEWE 114
Cdd:MTH00030  120 LEWD 123
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 33-114 2.55e-07

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 45.43  E-value: 2.55e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1237408504  33 KNNPYECGFDPMGSARLP--FSMKFFLVAITFLLFDLEIALLLPlpWASQSMDLK-FTVMMALLLIIILALGLIYEWTQK 109
Cdd:PRK07928   37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFDALGvFGLVEMALFMLTVFVAYAYVWRRG 114


                  ....*
gi 1237408504 110 GLEWE 114
Cdd:PRK07928  115 GLEWD 119
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
7-113 3.54e-07

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 45.12  E-value: 3.54e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1237408504   7 LMIDIILALVLVMAAFWLPQLNTYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSMDLkF 86
Cdd:PRK07756   16 LLLGILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYDKLGL-F 94

                          90       100
                  ....*....|....*....|....*..
gi 1237408504  87 TVMMALLLIIILALGLIYEWTQKGLEW 113
Cdd:PRK07756   95 ALIEMLIFVVMLLVGLAYAWKKKVLQW 121
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-73 2.06e-06

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 42.96  E-value: 2.06e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1237408504   1 MNLPLTLMIDIILALVLVMAAFWLPQLNTYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLL 73
Cdd:MTH00092    2 LVLIFVFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFL 74
ndhC CHL00022
NADH dehydrogenase subunit 3
 11-78 1.23e-05

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 41.13  E-value: 1.23e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1237408504  11 IILALVLVMAAFWLPQL----NTYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWA 78
Cdd:CHL00022   14 LIISSLIPILAFLISGLlapiSKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWA 83
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 36-76 3.70e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 37.18  E-value: 3.70e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 1237408504  36 PYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLP 76
Cdd:MTH00060   40 SFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
24-78 1.02e-03

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 36.18  E-value: 1.02e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1237408504  24 LPQLNTYAEKNNPYECGFDPMGSARlPFSMKFFLVAITFLLFDLEIALLlpLPWA 78
Cdd:PRK08489   38 LAQKNTEKLKLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWA 89
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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