|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-444 |
2.39e-174 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 495.44 E-value: 2.39e-174
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 1 MLKYLFMIIFLIPLCLLNNSWWLVHSMMFLFSFLFMICFYSYSDFNMISYYFGVDYFSFSLILLSFWVCSLMITASGSVY 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 81 LSLYHSNFFLFMVLFLMIMLYCSFASLNLLSFYIFFESSLVPTLLLILGWGYQPERLQSGVYLIFYTLFASLPLLLVLFY 160
Cdd:MTH00163 81 KKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 161 VYYYINTLYFPLLIDFGSYYFMFYVFMILAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISF 240
Cdd:MTH00163 161 LYNNSGSLSFFLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 241 LGLKFNYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCIGSLTLMIGHGLCSSGLFCLSNI 320
Cdd:MTH00163 241 LGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 321 IYERLGSRSLLINKGMINLMPSMTLWWFLLSSSNMAAPPSLNLIGELSLLNSLVSWSSFTFLALIFLSFFSAVYTLYMYS 400
Cdd:MTH00163 321 IYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYS 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 1331215856 401 YSQHGSFYAGVYTCSLGYFREYHLLFLHWLPLNILCLKGEYFFI 444
Cdd:MTH00163 401 YSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFML 444
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
33-443 |
1.44e-123 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 365.32 E-value: 1.44e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 33 FLFMICFYSYSDFNMISYYFGVDYFSFSLILLSFWVCSLMITASGSVYLSLYHSNFFLFMVLFLMIMLYCSFASLNLLSF 112
Cdd:MTH00150 1 LSLLLLYSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 113 YIFFESSLVPTLLLILGWGYQPERLQSGVYLIFYTLFASLPLLLVLFYVYYYINTLYFPLLIDFGSYYFM---FYVFMIL 189
Cdd:MTH00150 81 YFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSmglWGLLVFL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 190 AFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGLKFNYFWLSLGLSGGVIVSFICFRQVD 269
Cdd:MTH00150 161 AFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSD 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 270 LKSLIAYSSVAHMSMVIGGLMTMNWWGCIGSLTLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMTLWWFL 349
Cdd:MTH00150 241 VKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 350 LSSSNMAAPPSLNLIGELSLLNSLVSWSSFTFLALIFLSFFSAVYTLYMYSYSQHGSFYAGVYTCSLGYFREYHLLFLHW 429
Cdd:MTH00150 321 FCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHW 400
|
410
....*....|....
gi 1331215856 430 LPLNILCLKGEYFF 443
Cdd:MTH00150 401 VPLLLLILKSDLLF 414
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-440 |
8.31e-123 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 364.83 E-value: 8.31e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 1 MLKYLFMIIFLIPLCLLNNSWWLVHS---MMFLFSFLFMICFYSYSDFNMISYYFGVDYFSFSLILLSFWVCSLMITASG 77
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPWSWALTfstLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 78 SVYLSLYHSNFFLFMVLFLMIMLYCSFASLNLLSFYIFFESSLVPTLLLILGWGYQPERLQSGVYLIFYTLFASLPLLLV 157
Cdd:MTH00014 81 KIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 158 LFYVYYYINTLYFPLL-IDFGSYYF--MFYVFMILAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRV 234
Cdd:MTH00014 161 ILLIFYTNNSLSMLMSsMEPPSIYLmnLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 235 MKIISFLGLKFNYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCIGSLTLMIGHGLCSSGL 314
Cdd:MTH00014 241 SSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSAL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 315 FCLSNIIYERLGSRSLLINKGMINLMPSMTLWWFLLSSSNMAAPPSLNLIGELSLLNSLVSWSSFTFLALIFLSFFSAVY 394
Cdd:MTH00014 321 FALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAY 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 1331215856 395 TLYMYSYSQHGSFYAGVYTCSLGYFREYHLLFLHWLPLNILCLKGE 440
Cdd:MTH00014 401 SLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPD 446
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-440 |
5.61e-120 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 357.58 E-value: 5.61e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 1 MLKYLFMIIFLIPLCLL---NNSWWLVHSMMFLFSFLFMICFY-SYSDFNMISYYFGVDYFSFSLILLSFWVCSLMITAS 76
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLskpKFLWTNTTTYSLLIALLSLQWLKpPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 77 GS--VYLSLYHSNFFLFMVLFLMIMLYCSFASLNLLSFYIFFESSLVPTLLLILGWGYQPERLQSGVYLIFYTLFASLPL 154
Cdd:MTH00124 81 QNhlQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 155 LLVLFYVYYYINTLYFPLLIDFGSY------YFMFYVFMILAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGG 228
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTltnswtNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 229 YGIFRVMKIISFLGLKFNYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCIGSLTLMIGHG 308
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 309 LCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMTLWWFLLSSSNMAAPPSLNLIGELSLLNSLVSWSSFTFLALIFLS 388
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 1331215856 389 FFSAVYTLYMYSYSQHGSFYAGVYTCSLGYFREYHLLFLHWLPLNILCLKGE 440
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPE 452
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
2-444 |
1.81e-115 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 345.81 E-value: 1.81e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 2 LKYLFMIIFLIPLCLLNNSWW--LVHSMMFLFSFLFMICFYSYSDFNMISYYFGVDYFSFSLILLSFWVCSLMITASGSV 79
Cdd:MTH00205 1 MSIFGVFSLLIILFVLKFKDWsfFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 80 YLSLYHSNFFLFMVLFLMIMLYCSFASLNLLSFYIFFESSLVPTLLLILGWGYQPERLQSGVYLIFYTLFASLPLLLVLF 159
Cdd:MTH00205 81 FKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 160 YVYYYINTLYFPLLIDFGSYYFMFYVFMI---LAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRVMK 236
Cdd:MTH00205 161 FLNSLNFSLSMFFNFPLNFSDFYLFLYWIflmLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 237 IISFLGLKFNYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCIGSLTLMIGHGLCSSGLFC 316
Cdd:MTH00205 241 MLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 317 LSNIIYERLGSRSLLINKGMINLMPSMTLWWFLLSSSNMAAPPSLNLIGELSLLNSLVSWSSFTFLALIFLSFFSAVYTL 396
Cdd:MTH00205 321 LANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSL 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 1331215856 397 YMYSYSQHGSFYAGVYTCSLGYFREYHLLFLHWLPLNILCLKGEYFFI 444
Cdd:MTH00205 401 YLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIFIC 448
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-443 |
5.81e-113 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 339.58 E-value: 5.81e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 1 MLKYLFMIIFLIPLCLLNNSWWLVHSMM---FLFSFLFMICFYSYS-DFNMISYYFGVDYFSFSLILLSFWVCSLMITAS 76
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTtnsLIIAFLSLMWFNLPSeTMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 77 GSvYLS---LYHSNFFLFMVLFLMIMLYCSFASLNLLSFYIFFESSLVPTLLLILGWGYQPERLQSGVYLIFYTLFASLP 153
Cdd:MTH00068 81 QN-HLKnepINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 154 LLLVLFYVYYYINTLYFPLLIDFGSYYFM------FYVFMILAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLG 227
Cdd:MTH00068 160 LLIALLILQNSLGSLSLILLELMSPMQLMtytnkiWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 228 GYGIFRVMKIISFLGLKFNYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCIGSLTLMIGH 307
Cdd:MTH00068 240 GYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 308 GLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMTLWWFLLSSSNMAAPPSLNLIGELSLLNSLVSWSSFTFLALIFL 387
Cdd:MTH00068 320 GLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLG 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 1331215856 388 SFFSAVYTLYMYSYSQHGSFYAGVYTCSLGYFREYHLLFLHWLPLNILCLKGEYFF 443
Cdd:MTH00068 400 TLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELIS 455
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-444 |
1.03e-108 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 328.86 E-value: 1.03e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 1 MLKYLFMIIFLIPLCLLNNSWWLVHSMMFLFSFLFMICFY-----SYSDFNMISYYFGVDYFSFSLILLSFWVCSLMITA 75
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFllnnhWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 76 SGSV--YLSLYHSNFFLFMVLFLMIMLYCSFASLNLLSFYIFFESSLVPTLLLILGWGYQPERLQSGVYLIFYTLFASLP 153
Cdd:MTH00044 81 SINHlsNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 154 LLLVLFYVYYYINTLYFPL------LIDFGSYYFMFYVFMILAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLG 227
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLselnwlTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 228 GYGIFRVMKIISFLGLKF-NYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCIGSLTLMIG 306
Cdd:MTH00044 241 GYGLIRLINLFSLPSANNiSFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 307 HGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMTLWWFLLSSSNMAAPPSLNLIGELSLLNSLVSWSSFTFLALIF 386
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 1331215856 387 LSFFSAVYTLYMYSYSQHGSFYAGVYTCSLGYFREYHLLFLHWLPLNILCLKGEYFFI 444
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIILI 458
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-437 |
3.37e-105 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 319.92 E-value: 3.37e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 1 MLKYLFMIIFLIPLCLL-NNSWWLVHSMM--FLFSFLFMICFYSYSDFNM-ISYYFGVDYFSFSLILLSFWVCSLMITAS 76
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLsKNNMIWINTTTysLLISLISLLLLNQPNDNSLnFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 77 GSVYL--SLYHSNFFLFMVLFLMIMLYCSFASLNLLSFYIFFESSLVPTLLLILGWGYQPERLQSGVYLIFYTLFASLPL 154
Cdd:MTH00110 81 QHHLSkePLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 155 LLVLFYVYYYINTLYFPL-------LIDFGSYYFMFYVFMiLAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLG 227
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLlqlwaqpLPNSWSNNLLWLACM-MAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 228 GYGIFRVMKIISFLGLKFNYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCIGSLTLMIGH 307
Cdd:MTH00110 240 GYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 308 GLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMTLWWFLLSSSNMAAPPSLNLIGELSLLNSLVSWSSFTFLALIFL 387
Cdd:MTH00110 320 GLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLN 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 1331215856 388 SFFSAVYTLYMYSYSQHGSFYAGVYTCSLGYFREYHLLFLHWLPLNILCL 437
Cdd:MTH00110 400 MLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSL 449
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
5-432 |
1.69e-99 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 304.94 E-value: 1.69e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 5 LFMIIFLIPLCLLNNSWWLVHSMMFLFSFLFMICFYSYSDFNMIS--YYFGVDYFSFSLILLSFWVCSLMITASGS--VY 80
Cdd:MTH00206 6 LIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFsnLYLSYDPLSSPLVILSCWLLPLMFLASQNhmKN 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 81 LSLYHSNFFLFMVLFLMIMLYCSFASLNLLSFYIFFESSLVPTLLLILGWGYQPERLQSGVYLIFYTLFASLPLLLVLFY 160
Cdd:MTH00206 86 EPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLF 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 161 VYYYINTLYFPLLID---FGSYYFMFYVFMILAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRVMKI 237
Cdd:MTH00206 166 LQNSLGSLSLYILYFsklTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILI 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 238 ISFLGLKFNYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCIGSLTLMIGHGLCSSGLFCL 317
Cdd:MTH00206 246 LGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCL 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 318 SNIIYERLGSRSLLINKGMINLMPSMTLWWFLLSSSNMAAPPSLNLIGELSLLNSLVSWSSFTFLALIFLSFFSAVYTLY 397
Cdd:MTH00206 326 ANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLY 405
|
410 420 430
....*....|....*....|....*....|....*
gi 1331215856 398 MYSYSQHGSFYAGVYTCSLGYFREYHLLFLHWLPL 432
Cdd:MTH00206 406 MFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPV 440
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-440 |
2.68e-90 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 281.46 E-value: 2.68e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 1 MLKYLFMIIFLIPLCLLNNSWWL-----VHSMMFLFSFLFMICFYSYSDFNMISYYFGVDYFSFSLILLSFWVCSLMITA 75
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLwtttlAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 76 SGSVYLSLYHSNFFLFMVLF--LMIMLYCSFASLNLLSFYIFFESSLVPTLLLILGWGYQPERLQSGVYLIFYTLFASLP 153
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLtsLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 154 LLLVLFYVYYYINTL------YFPLLIDFGSYYFMFYVFMILAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLG 227
Cdd:MTH00127 161 LLVALLLLQNSTGTLsmltlqYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 228 GYGIFRVMKIISFLGLKFNYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCIGSLTLMIGH 307
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 308 GLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMTLWWFLLSSSNMAAPPSLNLIGELSLLNSLVSWSSFTFLALIFL 387
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 1331215856 388 SFFSAVYTLYMYSYSQHGSFYAGVYTCSLGYFREYHLLFLHWLPLNILCLKGE 440
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPE 453
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
48-399 |
3.55e-62 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 209.17 E-value: 3.55e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 48 ISYYFGVDYFSFSLILLSFWVCSLMITASGSVylSLYHSNFFLFMVLFLMIMLYCSFASLNLLSFYIFFESSLVPTLLLI 127
Cdd:COG1008 74 ISYHLGVDGISLPLVLLTALLTPLAILASWNE--IKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 128 LGWGYqPERLQSGVYLIFYTLFASLPLLLVLFYVYYYINTLYFPLL------IDFGSYYFMFYVFMIlAFLVKMPMFLVH 201
Cdd:COG1008 152 GIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAelaaapLPLTAQLLLFLAFFI-AFAVKVPMFPFH 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 202 LWLPSAHVEAPISGSMILAGVLLKLGGYGIFRVMkiisfLGL------KFNYFWLSLGLSGGVIVSFICFRQVDLKSLIA 275
Cdd:COG1008 230 TWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFA-----LPLfpeasaYFAPLLAALGVIGIIYGALVALAQTDLKRLIA 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 276 YSSVAHMSMVIGGLMTMNWWGCIGSLTLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMTLWWFLLSSSNM 355
Cdd:COG1008 305 YSSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASL 384
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 1331215856 356 AAPPSLNLIGELSLLNSlvSWSSFTFLALIFLS--FFSAVYTLYMY 399
Cdd:COG1008 385 GLPGTSGFVGEFLVLLG--AFQVNPWLAILAALglILTAAYLLWMY 428
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
106-388 |
8.06e-56 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 186.75 E-value: 8.06e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 106 SLNLLSFYIFFESSLVPTLLLILGWGYQPERLQSGVYLIFYTLFASLPLLLVLFYVYYYINTLYFPLLIDF------GSY 179
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKAltgglnSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 180 YFMFYVFMILAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGLKFNYFWLSLGLSGGVI 259
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 260 VSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCIGSLTLMIGHGLCSSGLFCLS-NIIYERLGSRSLLINKGMIN 338
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1331215856 339 LMPSMTLWWFLLSSSNMAAPPSLNLIGELSLLNSLVSWSSFTFLALIFLS 388
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
48-399 |
8.09e-56 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 192.34 E-value: 8.09e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 48 ISYYFGVDYFSFSLILLSFWVCSLMITASGSVYLSLYHSNFFLFMVLfLMIMLYcSFASLNLLSFYIFFESSLVPTLLLI 127
Cdd:PRK05846 74 ISYHLGVDGISLLLVVLTALLTPLAVLASWEEIKKRVKFYMAALLWL-EGGVIG-VFAALDLLLFYVFFEAMLIPMYFLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 128 LGWGYqPERLQSGVYLIFYTLFASLPLLLVLFYVYYYI-----NTLYFPLL---IDFGSYYFMFYVFMIlAFLVKMPMFL 199
Cdd:PRK05846 152 GVWGG-KNRIYAATKFFLYTLLGSLLMLVAIIYLVVVYynatgTFDIADLLnlpLPPGVQYWLFLAFFI-AFAVKMPMFP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 200 VHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRVMkiisfLGL------KFNYFWLSLGLSGGVIVSFICFRQVDLKSL 273
Cdd:PRK05846 230 LHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFS-----LPLfpdashEFAPIIITLGVIAIIYGALVALAQTDIKKL 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 274 IAYSSVAHMSMVIGGLMTMNWWGCIGSLTLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMTLWWFLLSSS 353
Cdd:PRK05846 305 IAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMA 384
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 1331215856 354 NMAAPPSLNLIGE-LSLLNSLVSWSSFTFLALIFLsFFSAVYTLYMY 399
Cdd:PRK05846 385 SLGLPGTSGFVGEfLILLGSFQVNPVIAFIATTGL-ILAAVYSLWLY 430
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
48-399 |
3.60e-53 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 185.14 E-value: 3.60e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 48 ISYYFGVDYFSFSLILLSFWVCSLMITASGSVYLSlyHSNFFLFMVLFLMIMLYCSFASLNLLSFYIFFESSLVPTLLLI 127
Cdd:TIGR01972 69 ISYHLGVDGISLLLVLLTALLTLLAILASWESIQK--RVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLI 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 128 LGWGyQPERLQSGVYLIFYTLFASLPLLLVLFYVYYY------INTLYfPLLIDFGSYYFMFYVFMIlAFLVKMPMFLVH 201
Cdd:TIGR01972 147 GVWG-GPNRIYAAMKFFLYTLAGSLLMLLAILGLYFLgggtfdLLELL-NLPLPFGVQTWLFLAFFI-AFAVKVPLFPLH 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 202 LWLPSAHVEAPISGSMILAGVLLKLGGYGIFRV-MKIISFLGLKFNYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVA 280
Cdd:TIGR01972 224 TWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFnLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSIS 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 281 HMSMVIGGLMTMNWWGCIGSLTLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMTLWWFLLSSSNMAAPPS 360
Cdd:TIGR01972 304 HMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGT 383
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1331215856 361 LNLIGELSLLnsLVSWSSFTFLALI--FLSFFSAVYTLYMY 399
Cdd:TIGR01972 384 SGFVGEFLIL--LGSFKVNPVVAFLaaLGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
45-399 |
2.83e-52 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 182.57 E-value: 2.83e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 45 FNMISYYFGVDYFSFSLILLSFWVCSLMITASGSVYLSLYHSnfFLFMVLFLMIMLYCSFASLNLLSFYIFFESSLVPTL 124
Cdd:MTH00204 72 FQWGPLVFAVDGVSLFFILLTTLLIPICILISWKSIKFLFKE--FLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMF 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 125 LLILGWGYQPERLQSGVYLIFYTLFASLPLLLVLFYVYYYINTL-YFPLLIDFGSYYFMFYVFM--ILAFLVKMPMFLVH 201
Cdd:MTH00204 150 LLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTdYQILLNIKLPLSIQKWLLVgfFLSLAVKIPQIPFH 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 202 LWLPSAHVEAPISGSMILAGVLLKLGGYGIFRV-MKIISFLGLKFNYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVA 280
Cdd:MTH00204 230 IWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFsWPLFPAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVA 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 281 HMSMVIGGLMTMNWWGCIGSLTLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMTLWWFLLSSSNMAAPPS 360
Cdd:MTH00204 310 HMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLS 389
|
330 340 350
....*....|....*....|....*....|....*....
gi 1331215856 361 LNLIGELSLLNSLVSWSSFTFLALIFLSFFSAVYTLYMY 399
Cdd:MTH00204 390 CNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
89-399 |
7.49e-50 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 176.01 E-value: 7.49e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 89 FLFMVLFLMIMLYCSFASLNLLSFYIFFESSLVPTLLLILGWGYQPERLQSGVYLIFYTLFASLPLLLVLFYVYYYINTL 168
Cdd:MTH00217 111 FLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTT 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 169 YFPLL----IDFGSYYFMFYVFMiLAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRV-MKIISFLGL 243
Cdd:MTH00217 191 DYQALcclkIEKELQYFIFLGFF-LSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFsWPLLPEASE 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 244 KFNYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCIGSLTLMIGHGLCSSGLFCLSNIIYE 323
Cdd:MTH00217 270 YFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYE 349
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1331215856 324 RLGSRSLLINKGMINLMPSMTLWWFLLSSSNMAAPPSLNLIGELSLLNSLVSWSSFTFLALIFLSFFSAVYTLYMY 399
Cdd:MTH00217 350 RHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
52-397 |
5.11e-47 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 168.95 E-value: 5.11e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 52 FGVDYFSFSLILLSFWV--CSLMITASGSVYLSlyhsNFFLFMVLFLMIMLYCSFASLNLLSFYIFFESSLVPTLLLILG 129
Cdd:MTH00226 98 FAVDGISIYFIILTGFIvpCSILISWHSVKYLT----KSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGI 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 130 WGYQPERLQSGVYLIFYTLFASLPLLLVLFYVYYYINTLYFPLLIDF-----GSYYFMFYVFMILAFLVKMPMFLVHLWL 204
Cdd:MTH00226 174 WGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCshvvsEQTQKWIFLGIFLAMAVKIPIFPFHIWL 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 205 PSAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGLK-FNYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVAHMS 283
Cdd:MTH00226 254 PKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQnLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMG 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 284 MVIGGLMTMNWWGCIGSLTLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMTLWWFLLSSSNMAAPPSLNL 363
Cdd:MTH00226 334 LVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNF 413
|
330 340 350
....*....|....*....|....*....|....
gi 1331215856 364 IGELSLLNSLVSWSSFTFLALIFLSFFSAVYTLY 397
Cdd:MTH00226 414 IGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
28-419 |
1.02e-44 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 160.46 E-value: 1.02e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 28 MFLFSFLFMICFYSYSDFNMISYYFGVDYFSFSLILLsfwvcsLMITASGSVYLSLYHSNFFLFMVLFLMIMLyCSFASL 107
Cdd:MTH00094 10 FLFFLFLMFFSFLMFNNYSWSGLFFFFDSFVFVLLIF------MMVFILGLVLLSEKNFNLLILSNLLILICL-LFFVSS 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 108 NLLSFYIFFESSLVPTLLLILGWGYQPERLQSGVYLIFYTLFASLPLLLVLFYVYYYINTLYFPLLIDfgsyyFMFYVFM 187
Cdd:MTH00094 83 NMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFFFSLCYFDFFLS-----WEMFFIL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 188 ILAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLglkFNYFWLSLGLSGGVIVSFICFRQ 267
Cdd:MTH00094 158 SLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV---YNNFWIIFSLLGMILSSFCCVFQ 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 268 VDLKSLIAYSSVAHMSMVIGGLMTMNWWGCIGSLTLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMTLWW 347
Cdd:MTH00094 235 SDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGLIF 314
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1331215856 348 FLLSSSNMAAPPSLNLIGELSLLNSLVSWSSFTFLALIFLSFFSAVYTLYMYSYSQHGSFYAGVYTCSLGYF 419
Cdd:MTH00094 315 SLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVGLS 386
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
53-393 |
2.28e-36 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 139.78 E-value: 2.28e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 53 GVDYFSFSLILLSFWVCSLMITASGSVYLS--LYHsnfflfmvlFLMIMLYCS----FASLNLLSFYIFFESSLVPTLLL 126
Cdd:PRK12561 56 GVDGLSMPLVLLSGLITTLSIFASWKVTRKprLFY---------FLMLVLYSAqigvFLAQDLLLFFLMWELELVPVYLL 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 127 ILGWGYQpERLQSGVYLIFYTLFASLPLLLVLFYVYYYINTLYFPL----LIDF-GSYYFMFYVFMILAFLVKMPMFLVH 201
Cdd:PRK12561 127 ISIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLaelgAKSYpLALELLLYAGFLIAFGVKLPIFPLH 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 202 LWLPSAHVEAPISGSMILAGVLLKLGGYGIFRV-MKIISFLGLKFNYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVA 280
Cdd:PRK12561 206 TWLPDAHGEASAPVSMILAGVLLKMGGYALIRFnVQMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVS 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 281 HMSMVIGGLMTMNWWGCIGSLTLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPsMTLWWFLLSS-SNMAAPP 359
Cdd:PRK12561 286 HMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMP-KTFALFTASSmASLALPG 364
|
330 340 350
....*....|....*....|....*....|....
gi 1331215856 360 SLNLIGELSLLNSLVSWSSFTFLALIFLSFFSAV 393
Cdd:PRK12561 365 MSGFVSELTVFLGITSSDVYSSTFRTITILLAAV 398
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
52-403 |
2.67e-33 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 129.88 E-value: 2.67e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 52 FGVDYFSFSLILLSFWVCSLMITASGSVYLSLYHSNFFLFMVLFLMIMLYCSFASLNLLSFYIFFESSLVPTLLLILGWG 131
Cdd:COG0651 72 LVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 132 YqPERLQSGVYLIFYTLFASLPLLLVLFYVYYYINTLYFPLLIDFGSYY-----FMFYVFMILAFLVKMPMFLVHLWLPS 206
Cdd:COG0651 152 T-KEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELdpgllLAAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 207 AHVEAPISGSMILAGVLLKLGGYGIFRVMKII--SFLGLKFNYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVAHMSM 284
Cdd:COG0651 231 AYPAAPSPVSALLSGLLTKVGVYAILRVLTLLfgADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGY 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 285 VIGGLMTMNWWGCIGSLTLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMTLWWFLLSSSNMAAPPSLNLI 364
Cdd:COG0651 311 ILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFV 390
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 1331215856 365 GELSLLNSLVSWSSFTFLALIFL-SFFSAVYTLYMYSYSQ 403
Cdd:COG0651 391 SKWLLLQAALEAGAWLLAAVLLLsSLLTLAYFVRIFGRAQ 430
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
53-393 |
1.91e-29 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 120.20 E-value: 1.91e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 53 GVDYFSFSLILLSFWVCSLMITASGSVYLSlyhSNFFLFMVLFLMIMLYCSFASLNLLSFYIFFESSLVPTLLLILGWGY 132
Cdd:PRK02546 84 GADGLSMPLILLTGFITTLAVLAAWPVTFK---PKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGG 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 133 QpERLQSGVYLIFYTLFASLPLLLVLFYVYYYINTLYFPLLI----DFG-SYYFMFYVFMILAFLVKMPMFLVHLWLPSA 207
Cdd:PRK02546 161 K-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTAlaakDFGlGFQLLCYAGLLIAYGVKLPIVPLHTWLPDA 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 208 HVEAPISGSMILAGVLLKLGGYGIFRV-MKIISFLGLKFNYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVI 286
Cdd:PRK02546 240 HGEATAPVHMLLAGILLKMGGYALLRMnAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVL 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 287 GGLMTMNWWGCIGSLTLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMTLWWFLLSSSNMAAPPSLNLIGE 366
Cdd:PRK02546 320 IGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAE 399
|
330 340
....*....|....*....|....*..
gi 1331215856 367 LSLLNSLVSWSSFTFLALIFLSFFSAV 393
Cdd:PRK02546 400 LMVFVGFATSDAYTLPFRVVVVFLAAV 426
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
52-393 |
1.23e-28 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 117.74 E-value: 1.23e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 52 FGVDYFSFSLILLSFWVCSLMITASGSVYLS--LYHsnfflfmvlFLMIMLYC----SFASLNLLSFYIFFESSLVPTLL 125
Cdd:CHL00011 80 LGIDGLSIGPILLTGFITTLATLAAWPVTRNsrLFY---------FLMLAMYSgqigLFSSRDLLLFFIMWELELIPVYL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 126 LILGWGYQpERLQSGVYLIFYTLFASLPLLLVLFYVYYY---INTLYFPLLIDfGSYYF----MFYVFMILAFLVKMPMF 198
Cdd:CHL00011 151 LLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGMGLYgsnEPTLNFETLAN-QSYPValeiLFYIGFLIAYAVKLPII 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 199 LVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRV-MKIISFLGLKFNYFWLSLGLSGGVIVSFICFRQVDLKSLIAYS 277
Cdd:CHL00011 229 PLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRInMELLPHAHSIFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYS 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 278 SVAHMSMVIGGLMTMNWWGCIGSLTLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMTLWWFLLSSSNMAA 357
Cdd:CHL00011 309 SVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMASLAL 388
|
330 340 350
....*....|....*....|....*....|....*.
gi 1331215856 358 PPSLNLIGELSLLNSLVSWSSFTFLALIFLSFFSAV 393
Cdd:CHL00011 389 PGMSGFVAELIVFFGIITSQKYLLMPKILITFVMAI 424
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
48-338 |
6.69e-26 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 109.79 E-value: 6.69e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 48 ISYYFGVDYFSFSLILLSFWVCSLMITASGSvylSLYHSNFFLFMVLFLMIMLYCSFASLNLLSFYIFFESSLVPTLLLI 127
Cdd:PRK06473 71 LSYHLGVDGLSLPLLVLNSLLTLIAIYSSDE---SIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 128 LGWGYQpERLQSGVYLIFYTLFASLpLLLVLF-----------YVYYYINTLYFPLlidfgSYYFMFYVFMILAFLVKMP 196
Cdd:PRK06473 148 AIWGGQ-RRGYAATKFLLYTAISGI-LILVSFlglvwlsgassFDYEPLRSHTLPL-----STQLLLLAPILVGFGIKIP 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 197 MFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGLKFNYFWLSLGLSGGVIVSFIC-FRQVDLKSLIA 275
Cdd:PRK06473 221 LVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCaIAQKDMKKMVA 300
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1331215856 276 YSSVAHMSMVIGGLMTMNWWGCIGSLTLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMIN 338
Cdd:PRK06473 301 YSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLN 363
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-401 |
1.66e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 99.57 E-value: 1.66e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 52 FGVDYFSFSLILLSFWVCSLMITASgsVYLSLYHSNFFLFMVLFLMIMLYCSFASLNLLSFYIFFESSLVPTLLLIlGWG 131
Cdd:PRK08375 73 LRADSLSALFLLVTSILAIAALLYA--IGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALV-AMG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 132 YQPERLQSGVYLIFYTLFASLPLLLVLFYVYYYINTLYFPLL---IDFGSYYFMFYVFMILAFLVKMPMFLVHLWLPSAH 208
Cdd:PRK08375 150 GDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLagaLAENPTVVTAFGFVLLALALKAAVFPLHTWLPRAY 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 209 VEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGLKFNYFWLS----LGLSGGVIVSFICFRQVDLKSLIAYSSVAHMSM 284
Cdd:PRK08375 230 PAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRFALGLGWllavLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGY 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 285 VIGGLMTMNWWGCIGSLTLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMTLWWFLLSSSNMAAPPSLNLI 364
Cdd:PRK08375 310 ILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFV 389
|
330 340 350
....*....|....*....|....*....|....*...
gi 1331215856 365 GELSLLNSLVSWSSFTFLALIFL-SFFSAVYTLYMYSY 401
Cdd:PRK08375 390 SKWYLVVGAVEAGQWLVLAVLLAsSLLALLYFLRIWYR 427
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
20-393 |
1.27e-21 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 96.53 E-value: 1.27e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 20 SWWLVHSMMFLFSFLFMICF--YSYSDFNMISYYFGVDYFSFSLILLSfwvcsLMITASGSVYLSLYHSNFFLFMVLFLM 97
Cdd:MTH00062 7 GFFLGFLLLLLFCLLYSSGVgcCILVVNNVFNGLFIFDSLSFYLILLV-----LFLGLYSQVMFYNLLSGVSRFFLFLSL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 98 IMLYCSFASLNLLSFYIFFESSLVPTLLLILGWGYQPERLQSGVYLIFYTLFASLPLLLVLFYVYYYINTLYFPLLIDFG 177
Cdd:MTH00062 82 IFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSDD 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 178 SYYFMFYVFMILAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGLkFNYFWLSLGLSGG 257
Cdd:MTH00062 162 SVSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSF-LGYLFLCCLFSVF 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 258 VIVSfiCFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCIGSLTLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMI 337
Cdd:MTH00062 241 FLIT--ACSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGI 318
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 1331215856 338 NLMPSMTLWWFLLSSSNMAAPPSLNLIGELSLLNSLVSWSSFTFLALIFLSFFSAV 393
Cdd:MTH00062 319 NGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYLLFWCFYLFFGGLV 374
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
48-357 |
1.65e-19 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 90.54 E-value: 1.65e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 48 ISYYFGVDYFSFSLILLSfwvCSLMITASGSVYLSLYHSNFFLFMVLFLMIMLYCSFASLNLLSFYIFFESSLVPTLLLI 127
Cdd:PRK07363 71 LSYSLGVDGLSLPLLVLN---SLLTWIAIYSIGENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 128 LGWGYQpERLQSGVYLIFYTLFASLpLLLVLF-----------YVYYYINTLYFPLlidfgSYYFMFYVFMILAFLVKMP 196
Cdd:PRK07363 148 AIWGGE-KRGYASIKFLIYTAVSGL-LVLAAFlgivwlsgstsFDYDAISTQNLSL-----NTQLILLTGLLLGFGIKIP 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 197 MFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRvmkiisfLGLK-FNYFWL----SLGLSGGVIV---SFICFRQV 268
Cdd:PRK07363 221 LVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLR-------FGLQlFPQTWSlvapGLAIIGTISViygALSAIAQK 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 269 DLKSLIAYSSVAHMSMVIGGLMTMNWWGCIGSLTLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMTLWWF 348
Cdd:PRK07363 294 DIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPIRGLPLTSA 373
|
....*....
gi 1331215856 349 LLSSSNMAA 357
Cdd:PRK07363 374 LLVLAGMAS 382
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
23-399 |
2.37e-17 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 84.28 E-value: 2.37e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 23 LVHSMMFLFSFLFMICFYSYSDFNMISYYFGVDYFSFSLILLSFWVCSLMitASGSVYLSLYHSNFFLFMVLFLMIMLYC 102
Cdd:PRK08668 36 LLFLIKLYFTLKVGTGEKLTLFFGGFKLTFTLTHLSWFFAMISLLVIFSV--AFFMVSEKTKNDAYFNMFALMSLAGVLG 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 103 SFASLNLLSFYIFFESSLVPTLLLILgWGYQPERLQSGVYLIFYTLFASLpLLLVLFYVYYYINTLYFPLLIDF------ 176
Cdd:PRK08668 114 VFLANDLLTLYIFWEIMTFSSFMMVP-MGKKESRKASLKYFVLSAIGAYA-MLYAIFLIYAKTGTFDFADISQGlindts 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 177 GSYYFMFYVFMILAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGL-----------KF 245
Cdd:PRK08668 192 TGFALIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLPGTKLfsefgtyrgvpLF 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 246 NYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCIGSLTLMIGHGLCSSGLFCLSNIIYERL 325
Cdd:PRK08668 272 NYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRT 351
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1331215856 326 GSRSLLINKGMINLMPSMTLWWFLLSSSNMAAPPSLNLIGELSLLNSLVSWSSFTFLALIFlsFFSAVYTLYMY 399
Cdd:PRK08668 352 GTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAF--FGSIGSFLYVF 423
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
181-398 |
1.02e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 82.33 E-value: 1.02e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 181 FMFYVFMILAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGLKFNYFW-------LSLG 253
Cdd:PRK12667 223 GVALALALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFGISPSLIDFRaalspilIILG 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 254 LSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCIGSLTLMIGHGLCSSGLFCLSNIIYERLGSRSLLIN 333
Cdd:PRK12667 303 AVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDEL 382
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1331215856 334 KGMINLMPSMTLWWFLLSSSNMAAPPSLNLIGELSLLNSLVSwSSFTFLALIFLsFFSAVYTLYM 398
Cdd:PRK12667 383 AGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLE-SGFYLPALVLL-IASAISLVGY 445
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
184-393 |
9.20e-16 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 79.20 E-value: 9.20e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 184 YVFMILAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRVMKIIS-FLGLKF-NYFWLSLGLSGGVIVS 261
Cdd:PRK06458 217 FVFLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDaAIGSDFpGRLLLIFGLLSVLVAA 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 262 FICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCIGSLTLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMP 341
Cdd:PRK06458 297 FFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSP 376
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1331215856 342 sMTLWWFLLSSSNMA-APPSLNLIGELSLLNSLVS---WSSFTFLALIFLSFFSAV 393
Cdd:PRK06458 377 -LTGWGLMLGALAIAgMPPFGVFISEFLILTAGLArgpLLIAILLLLLLTLAFAAL 431
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
91-391 |
8.48e-15 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 76.69 E-value: 8.48e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 91 FMVLFLMIMLYCsFASLNLLSFYIFFESSLVPTLLLILGWGYQPERLQSGVYLIFYTLFASLPLLLVLFYVYYYINTLYF 170
Cdd:PRK08667 116 LTALFILSMLGV-VASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFEL 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 171 PLLIDFGSYYFMFYVFMILAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGLKFNYFWL 250
Cdd:PRK08667 195 SPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLIL 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 251 SLGLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCIGSLTLM-----------IGHGLCSSGLFCLSN 319
Cdd:PRK08667 275 LAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGLDTLAllalggalfhsLNHALFKSLLFLTAG 354
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1331215856 320 IIYERLGSRSLLINKGMINLMPSMTLWWFLLSSSNMAAPPSLNLIGELSLLNSL-----VSWSSFTFLALIFLSFFS 391
Cdd:PRK08667 355 SVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFfqsfsVADPLIKILLFSVLAIFA 431
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-103 |
2.08e-12 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 63.31 E-value: 2.08e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 1 MLKYLFMIIFLIPLCLLNNSWWL-----VHSMMFLFSFLFMICFYSYSDFNMISYYFGVDYFSFSLILLSFWVCSLMITA 75
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLwttstLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 1331215856 76 SGSVYLS--LYHSNFFLFMVLFLMIMLYCS 103
Cdd:pfam01059 81 SQKHLKSepNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
80-398 |
4.54e-12 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 68.24 E-value: 4.54e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 80 YLSLYHSN---FFLFMVLFLMIMLYCSFASlNLLSFYIFFESSLVPTLLLILGWGYQPERLQSGVYLIFYTLFASLPLLL 156
Cdd:PRK12646 101 YLSSRKDNlprFYFYLTLFMFSMIGIVLSD-NTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLV 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 157 VLFYVYYYINTLYFPLLID-----FGSYYFMFYVFMIL--AFlVKMPMFLVHLWLPSAhVEAPISGSMIL-AGVLLKLGG 228
Cdd:PRK12646 180 GFIMLYIMTGTNNITEILGqadhiKNHGLFIPMIFMFLlgAF-TKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGI 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 229 YGIFRVMKIISfLGLKFNYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVAH----MSMV-IGGLMTMNWWGCIGSLTL 303
Cdd:PRK12646 258 FLLFRFTPLLG-LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQlgmiMAMVgIGGGYAQHQQDAIASIYV 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 304 MI---------GHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMTLwWFLLSSSNMAAPPSLN-LIGELSLLNSL 373
Cdd:PRK12646 337 FVlfaalfhlmNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNL-VMTIAALSMAGVPFLNgFLSKEMFLDAL 415
|
330 340 350
....*....|....*....|....*....|....*
gi 1331215856 374 VSWSSFTFLALIFL----------SFFSAVYTLYM 398
Cdd:PRK12646 416 TQTGQLSQFSLISMiiivfigviaSIFTFTYALYM 450
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
86-324 |
5.74e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 67.28 E-value: 5.74e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 86 SNFFLFMVLFLMIMLYCSFASLNLLSFYIFFESSLVPTLLLIlGWGYQPERLQSGVYLIFYTLFASLPLLLVLFYVYYYI 165
Cdd:PRK07234 93 TRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLV-AYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQAN 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 166 NTLYFPLLIDFGSYYFmfyVFMILAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGLKF 245
Cdd:PRK07234 172 GTFAFSGLATADPEAF---ALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIV 248
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1331215856 246 NYFWLSLGLSGgvivSFICFRQVDLKSLIAYSSVAHMSMVIGGlmtmnwwGCIGSLtLMIGHGLCSSGLFCLSNIIYER 324
Cdd:PRK07234 249 RIFGVGTALLG----VLFALLEKDLKRMLAFSTISQLGFILAA-------PLVGGL-YALAHGLVKSTLFLCAGALPSR 315
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
181-399 |
6.80e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 67.09 E-value: 6.80e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 181 FMFYVFMILAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRVMKII--SFLGLKFNYFWLSLGLSGGV 258
Cdd:PRK08676 206 GASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLrqSGAAEQFSNVLIGLGIFSIA 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 259 IVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCIGSLTLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMIN 338
Cdd:PRK08676 286 VAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFR 365
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1331215856 339 LMPSMTLWWFLLSSSNMAAPPSLNLIGELSLLNSLVSWSSFTFLALIFLSFFSAVYTLYMY 399
Cdd:PRK08676 366 LQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSFAIFL 426
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
89-397 |
7.96e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 63.83 E-value: 7.96e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 89 FLFMVLFLMIMLYCSFASLNLLSFYIFFESSLVPTLLLiLGWGYQPERLQSGVYLIFYTLFASLPLLLVLFYVYYYINTL 168
Cdd:PRK12665 113 FLPTYLILVAGVSNAFLAGDLFNLYVGFEILLVASYVL-LTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTL 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 169 YFPLL------IDFGSYYFMFYVFMIlAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRVMKIIsFLG 242
Cdd:PRK12665 192 NMADLavrldeLPSGTRTALFAVLLV-AFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLL-FPG 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 243 LKFNYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCIGSLTLMIGHGLCSSGLFCLSNIIY 322
Cdd:PRK12665 270 GGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIE 349
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1331215856 323 ERLGSRSLLINKGMINLMPSMTLWWFLLSSSNMAAPPSLNLIGELSLLNSLVSWSSFTFLALIFLSFFSAVYTLY 397
Cdd:PRK12665 350 RQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLEAGAEDGTWLAWALVAGGVVTSLLTLY 424
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
186-395 |
2.75e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 62.06 E-value: 2.75e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 186 FMILAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRVMKII-----SFLGLKFNYFWLSLGLSGGVIV 260
Cdd:PRK12662 214 FIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVfkanfVFTTLPFNNVFMILAALAIVFG 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 261 SFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCIGSLTLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLM 340
Cdd:PRK12662 294 SVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSM 373
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1331215856 341 PSMTLWWFLLSSSNMAAPPSLNLIGELSLLNSLVSWSSFT-FLALIFLSFFSAVYT 395
Cdd:PRK12662 374 PKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIgLVVLLVGSGLSVIYV 429
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
59-396 |
1.35e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 56.75 E-value: 1.35e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 59 FSLILLSFWVCSLMITASGSVYLSLYHSNFFLFMVLFLMIMLYCSFASLNLLSFYIFFESSLVPTLLLIlGWGYQPERLQ 138
Cdd:PRK06589 88 FLLLIGFLWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLI-GHTRNNISLS 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 139 SGVYLIFYTLFASLPLLL-VLFYVYYYINTLYFPLLIDFGSYYFMFYVFMILAFLVKMPMFLVHLWLPSAHVEAPISGSM 217
Cdd:PRK06589 167 GGYKYLKILMISALLLFLpAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSAL 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 218 ILAGVLLKLGGYGIFRVMKIISFLGLKFNYFWLSLGLSGGVIV-----SFICFRQVDLKSLIAYSSVAHMSMVIGGLMTM 292
Cdd:PRK06589 247 LHAVIVVKTGLFCIYKILLYIFGLSYLQRIFAEFNWLIFIPIVsifysSLKALKTDNIKKILAYSTISQLSLALLSAFIL 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 293 NWWGCIGSLTLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMTLWWFLLSSSNMAAPPSLNLIGELSLL-- 370
Cdd:PRK06589 327 TPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILla 406
|
330 340
....*....|....*....|....*....
gi 1331215856 371 ---NSLVSWSSFTFLALIFLSFFSAVYTL 396
Cdd:PRK06589 407 aseQNQPWLSIIVMLVVIASSILSALYLL 435
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-398 |
3.23e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 55.49 E-value: 3.23e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 108 NLLSFYIFFESSLVPTLLLILGWGYQPERLQSGV-YLIFYTLFASLPLLLV--LFYVYYYINTLYFPLLIDFGSYYF--M 182
Cdd:PRK08376 142 DLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIkYMFVGSLASSMVLLGIalLYGQYGTLNMAYLAVKMSENPTVVakI 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 183 FYVFMILAFLVKMPMFLVHLWLPSAHVEAPISGSMILagVLLKLGG-YGIFRVMkiisflglkFNYFWLSLGLS--GGVI 259
Cdd:PRK08376 222 ALALFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVL---------FSIYGPAINLAtvGWVI 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 260 VSFICFR----------QVDLKSLIAYSSVAH---------MSMVIGGLMTMNWWGCI---GSLTLMIGHGLCSSGLFCL 317
Cdd:PRK08376 291 IILGCLTmfvgvamavvQKDVKRLLAYHSVSQigymllglgVGLAALGDPAMASYGEIalaGGIYHIVNHALYKALLFLT 370
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 318 SNIIYERLGSRSLLINKGMINLMPsMTLWWFLLSSSNMAAPPSLN------LIGELS-LLNSLVSWSSFTFLALIFLSFF 390
Cdd:PRK08376 371 AGAVIYETGTRNLNELGGLARTMP-KTTIAFLIGAAAIVGLPPFNgfaskwLIYESSaLFNPILGVIAMIGSVLTLASFV 449
|
....*...
gi 1331215856 391 SAVYTLYM 398
Cdd:PRK08376 450 KVFHTAFF 457
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
187-362 |
3.17e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 52.58 E-value: 3.17e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 187 MILAFL---VKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRVmkIISFLG---LKFNYFWLSLGLSGGVIV 260
Cdd:PRK06521 213 FLLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRV--VFDLLGapgWWWGVLVLALGAISAVLG 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 261 SFICFRQVDLKSLIAYSSVAHMSMVIGGL-MTM----NWWGCIGSLTLM------IGHGLCSSGLFCLSNIIYERLGSRS 329
Cdd:PRK06521 291 VLYALAEHDLKRLLAYSTIENIGIIFVGLgLAMvfiaYGMPLLAALALTaalyhlLNHALFKSLLFLGAGAVLHATGTRD 370
|
170 180 190
....*....|....*....|....*....|...
gi 1331215856 330 LLINKGMINLMPsMTLWWFLLSSSNMAAPPSLN 362
Cdd:PRK06521 371 MEKLGGLIRRMP-WTAWAFLIGCLAISALPPLN 402
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
187-394 |
6.18e-07 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 51.69 E-value: 6.18e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 187 MILAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGLKFNYFWL--SLGLSGGVIVSFIC 264
Cdd:PRK08377 212 LIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLKLviIMATLTVFFAELSA 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 265 FRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCIGSLTLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMT 344
Cdd:PRK08377 292 LRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTA 371
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 1331215856 345 LWWFLLSSSNMAAPPSLNLIGELSLLNSLVSWSSFTFLALI-FLSFFSAVY 394
Cdd:PRK08377 372 LALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVlGASVVEAVY 422
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-388 |
3.38e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 49.18 E-value: 3.38e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 52 FGVDYFSFSLILLSFWVCSLMITASGSVYLSLYHSNFFLFMVLFLMIMLYCSFASLNLLSFYIFFESSLVPTLLLILGWG 131
Cdd:PRK07691 73 FVADMFAALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 132 YQPERLQSGVYLIFyTLFASLPLLLVLFYVYYYINTLYFPLLI---------DFGSYYFMFYVFMILaFLVKMPMFLVHL 202
Cdd:PRK07691 153 TKIQLRESIKYVLI-NVVSSAFFVVAVAILYSVVGTLNMADISvkiaelsagQTGLITVVAILFLFV-FATKAGLFPLYF 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 203 WLPSAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGLKFNYfwLSLGLSGGVIVSFICF---RQVDLKSLIAYSSV 279
Cdd:PRK07691 231 WLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTH--YLILILALLTIIFGVIgavAYFDIKKIIIYNIM 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 280 AHMSMVIGGLMTMNWWGCIGSLTLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMTlWWFLLSSSNMAA-P 358
Cdd:PRK07691 309 IAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLG-WMFFIAALSLAGiP 387
|
330 340 350
....*....|....*....|....*....|
gi 1331215856 359 PSLNLIGELSLLNSLVSWSSFTFLALIFLS 388
Cdd:PRK07691 388 PLSGFYGKFFIVEGTFEAGFYVSGIIVLLS 417
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
52-396 |
4.56e-06 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 48.79 E-value: 4.56e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 52 FGVDYFSFSLILLSFWVCSLMITASGSVYLSLYHSNFFLFMVLFLMIMLYCSFASLNLLSFYIFFESSLVPTLLLILgWG 131
Cdd:PRK12663 73 FTGDSLSALMVTTASFVATAIMAYGFGDIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLIT-LG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 132 YQPERLQSGVYLIFYTLFASLPLLLVLFYVYYYINTLYFPLL------IDFGSYYFMFYVFMILAFLVKMPMFLVHlWLP 205
Cdd:PRK12663 152 QEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIamrlndMGDTATLTTIALLFLLAFGMKAALFPFM-WLP 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 206 SAHVEAPISGSMILAGVLLKLGGYGIFRVM--------KIISFLglkfnyfwlsLGLSGG---VIVSFICFRQVDLKSLI 274
Cdd:PRK12663 231 AAYHTPNTEVAALFAALLTKVGIYALIRVFtllfpqerELLHPL----------LATMAAitmVIGALGALAYKDIRRIA 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 275 AYSSVAHMSMVIGGLMTMNWWGCIGSLTLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMTLWWFLLSSSN 354
Cdd:PRK12663 301 GYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAI 380
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1331215856 355 MAAPPSLNLIGELSLLNSLVSWSSFTFLALIFLSFFSAVYTL 396
Cdd:PRK12663 381 GGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSL 422
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
185-401 |
4.57e-06 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 49.27 E-value: 4.57e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 185 VFMILAFLVKMPMFLVHLWLPSAHVEA-PIS-----GSMILAGVLLKLGGYGIFRVMKIisflglkFNYFWLSLGLSGGV 258
Cdd:PRK12650 212 VLIAVAAFTKSAQFPFHFWLPEAMAAItPVSaflhaAAVVKAGIYLLLRFSPVFHDVAV-------WNWLLIIVGMITAL 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 259 IVSFICFRQVDLKSLIAYSSVAHMsmviGGLMTMNWWGCIGSLTLMI----GHGLCSSGLFCLSNIIYERLGSRSLLINK 334
Cdd:PRK12650 285 MGAVFAVQKTDLKKLTAYSTVSQL----GWIVATIGVGTPFALTAAVvhtlAHALFKSSLFMLIGVVDHQAGTRDIRRLG 360
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 335 GMINLMPsMTLWWFLLSSSNMAA-PPSLNLIGELSLLNSLVS--WSSFTFLALIFLSFFSAVYTlYMYSY 401
Cdd:PRK12650 361 SLWRRMP-FTFVSVTIAALSMAAvPPLFGFVSKEGMLTAFLEapGGNAGVVLLLVGAALGAVFT-FAYSA 428
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
87-359 |
5.36e-06 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 48.43 E-value: 5.36e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 87 NFFLFMVLFLMIMLYCSFASlNLLSFYIFFESSLVPTLLLIlGWGYQPERLQSGVYLIFYTLFASLPLLLVLFYVYYYIN 166
Cdd:PRK06525 114 RYYAFLLLFIGAMAGLVYSS-TLLGLLLFFEITGLCSWALI-SYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTG 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 167 TLYFPLL--IDFGSYYFMFYVFMILAFlVKMPMFLVHLWLPSAhVEAPISGSMIL-AGVLLKLGGYGIFRVMKIISFLGL 243
Cdd:PRK06525 192 TFALSALsgLHGSLKYLVFLGILFAAW-GKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPH 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 244 KFNYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTM---NWWGCIGSLTLMIGHGLCSSGLFCLSNI 320
Cdd:PRK06525 270 VIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGA 349
|
250 260 270
....*....|....*....|....*....|....*....
gi 1331215856 321 IYERLGSRSLLINKGMINLMPSMTLWWFLLSSSNMAAPP 359
Cdd:PRK06525 350 LSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPP 388
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
200-362 |
5.39e-05 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 45.59 E-value: 5.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 200 VHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFrvmkIISFLGLKFNYFWLSLGLSGGVIVSFI----CFRQVDLKSLIA 275
Cdd:PRK08042 199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGIL----TLSLLGGNAPLWWGVALLVLGMITAFVgglyALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 276 YSSVAHMSMVIGGL-----------MTMNWWGCIGSLTLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMT 344
Cdd:PRK08042 275 YHTLENIGIILLGLgagvtgialeqPALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVIS 354
|
170
....*....|....*...
gi 1331215856 345 LwWFLLSSSNMAAPPSLN 362
Cdd:PRK08042 355 I-AMLVGLMAMAALPPLN 371
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
86-362 |
9.73e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 44.82 E-value: 9.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 86 SNFFLFMVLFLMIMLYCSFASlNLLSFYIFFESSLVPTLLLILGWGYQPERLQSGVYLIFYT------LFASLPLLLVLF 159
Cdd:PRK12649 111 PRYYQYLLLFMGSMIGMVFSG-NTIQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITaggglfMFAGFLLLHVIT 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 160 YVYYYINTLYFPLLIDFGSYYFMFYVFMILAFL---VKMPMFLVHLWLPSAhVEAPISGSMIL-AGVLLKLGGYGIFRVM 235
Cdd:PRK12649 190 GTYDIATILQDSELIENIKGHPLFLITLILIFIgaaAKSAQGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARIH 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 236 KIISflGLKFNYFWLS-LGLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMviggLMTMNWW--------GCIGSLTLMIG 306
Cdd:PRK12649 269 PIFS--GTEAWFILVSgTGMITMVLAGFLAFRQTDIKAILAYSTISQLAY----LMTMYGYttyhepglGVAAATFHLLN 342
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1331215856 307 HGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPsMTLWWFLLSSSNMAAPPSLN 362
Cdd:PRK12649 343 HATFKACLFLVAGIVAHEAATRDIRKLGGLRKEMP-ITFIVASIAALAMAGIPPLN 397
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
29-315 |
7.16e-04 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 41.64 E-value: 7.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 29 FLFSFLFMICFYSYSDFNMISYYFGVDYFSFSLILLSFwVCSLMITASGSVYLSLYHSNFF------LFMVLFLMIMLyc 102
Cdd:COG1007 43 LLLALALLLLALGGGTGTAFGGMFVVDGFALFFKLLIL-LAALLVLLLSRDYLERRGLLRGefyallLFATLGMMLMA-- 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 103 sfASLNLLSFYIFFESSLVPTLLLIlgwGYQPERLQS---GVYLIFYTLFASLPLLLVLFYVYYYINTLYFP----LLID 175
Cdd:COG1007 120 --SANDLLTLFLGLELLSLSLYVLV---AFRRDDRRSseaALKYFLLGALSSGFLLYGISLLYGATGSLNLAgiaaALAA 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 176 FGSYYFMFY---VFMILAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLlKLGGYGIF-RVMkIISFLGLKFNYFWLS 251
Cdd:COG1007 195 GGANSPLLLlglVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAALlRLL-VEAFPGLAADWQLLL 272
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1331215856 252 LGLSGGVIV--SFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCIGSLTLMIGHGLCSSGLF 315
Cdd:COG1007 273 AVLAVLSMTvgNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAF 338
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
52-388 |
9.33e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 41.83 E-value: 9.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 52 FGVDyFSFSLILLSFwVCSLMITASG-------SVYLSLYH--SNFFLFMVLFLMIMLYCSFASlNLLSFYIFFESSLVP 122
Cdd:PRK12647 54 LGVN-LSFLLDGLSL-TFALLITGIGtlivlyaGGYLKGHPdlGRFYSYILLFMASMLGLVLSD-NLITLFVFWELTSIT 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 123 TLLLIlgwGYQPERLQS---GVYLIFYTLFASLPLLLVLFYVYYYINTLYFPLLIDFG------SYYFMFYVFMILAFLV 193
Cdd:PRK12647 131 SFLLI---GFNHEREAArraALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLASGdvirehPLYLAILLLVLGGAFT 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 194 KMPMFLVHLWLPSAhVEAPI-------SGSMILAGVLLklggygifrVMKIISFLGLKFNYFWLsLGLSGG---VIVSFI 263
Cdd:PRK12647 208 KSAQFPFHFWLPNA-MEAPTpvsaylhSATMVKAGIYL---------LARLNPVLGGTPLWQTI-LPLFGGltmLTGALL 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 264 CFRQVDLKSLIAYSSVahmsMVIGGLMTMNWWGCIGSLT----LMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINL 339
Cdd:PRK12647 277 AVRQTDLKLILAYSTV----SALGTLVMLLGLGSELAIKaavlFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRA 352
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 1331215856 340 MPSMTLWWFLLSSSNMAAPPSLNLIGELSLLNSLV---SWSSFtFLALIFLS 388
Cdd:PRK12647 353 MPITAAAALLAALSMAGLPPLFGFLAKELIYEALLeapLWSLI-LTVAAVLG 403
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
89-315 |
3.38e-03 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 39.80 E-value: 3.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 89 FLFMVLFLMIMLycsfASLNLLSFYIFFESSLVPTLLLIlgwGYQPERLQS---GVYLIFYTLFASLPLLLVLFYVYYYI 165
Cdd:PRK05777 109 VLFALLGMMVMV----SANDLLTLFLGLELLSLPLYALA---ALRRDRRRSleaAIKYFVLGALASGFLLYGMSLLYGAT 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 166 NTLYFP-----LLIDFGSYYFMFY--VFMILAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLlKLGGYGIFRVMKII 238
Cdd:PRK05777 182 GSLSFAgiakaLADGSGNSLLLLFglVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAVLLRLLVV 260
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1331215856 239 SFLGLKFNYFWLSLGLSGGVIV--SFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCIGSLTLMIGHGLCSSGLF 315
Cdd:PRK05777 261 AFGGLSEDWQQVLAIIAIASMLvgNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
88-399 |
3.51e-03 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 39.75 E-value: 3.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 88 FFLFMVLFLMIMLYCSFASlNLLSFYIFFESSLVPTLLLILGWGYQPERLQSGVYLIFYTLFASLPLLLVLFYVYYYINT 167
Cdd:COG1009 113 FFAYLLLFMAAMLGLVLSD-NLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGT 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 168 LYFPLLIDFGSYYFMFYVFMILAFLV------KMPMFLVHLWLPSAhVEAPISGS-------MILAGVLLklggygifrV 234
Cdd:COG1009 192 LNFSELLAAAPTILSSPLLTLILLLLllgafgKSAQFPLHFWLPDA-MEGPTPVSallhaatMVKAGVYL---------L 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 235 MKIISFLGLKFNYFWL--SLGLSGGVIVSFICFRQVDLKSLIAYSSVAHMsmvigGLMTMnwwgCIG------SLTLMIG 306
Cdd:COG1009 262 ARLSPLFALSPVWLTVvaIIGAITALFAALIALAQTDIKRVLAYSTVSQL-----GYMFL----ALGvgayvaALFHLLT 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 307 HGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPsMTLWWFLLSSSNMAA-PPSLNLIGELSLLNSLV---SWSSFTFL 382
Cdd:COG1009 333 HAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMP-ITAITFLIGALSLAGiPPFAGFFSKEAILEAALeagGLGPLLLA 411
|
330
....*....|....*..
gi 1331215856 383 ALIFLSFFSAVYTLYMY 399
Cdd:COG1009 412 VALLGAFLTAFYSFRLF 428
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
70-286 |
6.01e-03 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 39.14 E-value: 6.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 70 SLMITASGS--VYLSLYH--------SNFFLFMVLFLMIMLYCSFaSLNLLSFYIFFESSLVPTLLLILGWgYQPERLQS 139
Cdd:PRK12645 84 ALLITGIGSlvVLYSIYYlskkkeqlGNFYVYLLLFMGAMLGVVL-SDNLIVLYLFWELTSISSFLLISYW-YEREASRY 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 140 GV---YLIfyTLFASLPLL--LVLFYVY---YYINTLYFPLLIDFGSYYFMFYVFMIL--AFlVKMPMFLVHLWLPSAhV 209
Cdd:PRK12645 162 GAqksMLI--TVFGGLSMLggFILLYIMtgsFSIREMIANADEIQNSPLFIPAMILILlgAF-TKSAQFPFYIWLPDA-M 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331215856 210 EAPISGSMIL-AGVLLKLGGYGIFRVMKIISFLGLkfnYFWL--SLGLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVI 286
Cdd:PRK12645 238 EAPTPVSAYLhSATMVKAGIYLVARFTPIFAGSQV---WFWTvtLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIM 314
|
|
| |
