|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 716.97 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 1 MLKIIIPTILLLPTTMLCKPKQLWSTTLTHSFGIAMLSLQWFKPTTEPMAFSNHYLGVDQISAPLLVLSCWLTPLMILAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 81 QNHLATEPSSRKRTFMITIILLQLSLILAFSSLELIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLTGSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 161 LVALSHMQIQNGTLSTHMMQLNQHTMMNSWAHSMWWLALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 241 YGIIRITMTLDPLSKMLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLAQTQWSHTGSITLMIAHG 320
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 321 LTSSMLFCLANTNYERTHSRTLLLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIIVSLFNWSNVTILMTGLGT 400
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 1593549716 401 LITATYTLYMLTTTQWGETPSHMKSIPPTHTREHLLMALHTLPMILLMTKPELIWGM 457
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 641.97 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 1 MLKIIIPTILLLPTTMLCKPKQLWSTTLTHSFGIAMLSLQWFKPTTEPMAFSNHYLGVDQISAPLLVLSCWLTPLMILAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 81 QNHLATEPSSRKRTFMITIILLQLSLILAFSSLELIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLTGSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 161 LVALSHMQIQNGTLSTHMMQLNQHTMMNSWAHSMWWLALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 241 YGIIRITMTLDPLSKMLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLAQTQWSHTGSITLMIAHG 320
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 321 LTSSMLFCLANTNYERTHSRTLLLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIIVSLFNWSNVTILMTGLGT 400
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 1593549716 401 LITATYTLYMLTTTQWGETPSHMKSIPPTHTREHLLMALHTLPMILLMTKPELIWGMF 458
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISGMF 458
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 596.49 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 1 MLKIIIPTILLLPTTMLCKPKQLWSTTLTHSFGIAMLSLQWFKPTTEPMAFSNHYLGVDQISAPLLVLSCWLTPLMILAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 81 QNHLATEPSSRKRTFMITIILLQLSLILAFSSLELIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLTGSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 161 LVALSHMQIQNGTLSTHMMQLNQHTMMNSWAHSMWWLALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 241 YGIIRITMTLDPLSKMLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLAQTQWSHTGSITLMIAHG 320
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 321 LTSSMLFCLANTNYERTHSRTLLLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIIVSLFNWSNVTILMTGLGT 400
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 1593549716 401 LITATYTLYMLTTTQWGETPSHMKSIPPTHTREHLLMALHTLPMILLMTKPELIWGMFY 459
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 543.39 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 1 MLKIIIPTILLLPTTMLCKPKQLWSTTLTHSFGIAMLSLQWFKPTTEP-MAFSNHYLGVDQISAPLLVLSCWLTPLMILA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETgWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 80 SQNHLATEPSSRKRTFMITIILLQLSLILAFSSLELIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLTGSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 160 LLVALSHMQIQNGTLSTHMMQLNQHTMMNSWAHSMWWLALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 240 GYGIIRITMTLDPLSKMLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLAQTQWSHTGSITLMIAH 319
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 320 GLTSSMLFCLANTNYERTHSRTLLLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIIVSLFNWSNVTILMTGLG 399
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 1593549716 400 TLITATYTLYMLTTTQWGETPSHMKSIPPTHTREHLLMALHTLPMILLMTKPELIWG 456
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWG 457
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-454 |
4.18e-168 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 480.59 E-value: 4.18e-168
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 3 KIIIPTILLLPTTMLCKPKQLWSTTLTHSFGIAMLSLQWFKPTTE-PMAFSNHYLGVDQISAPLLVLSCWLTPLMILASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEvGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 82 NHLATEPSSRKRTFMITIILLQLSLILAFSSLELIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLTGSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 162 VALSHMQIQNGTLSTHMMQLNQhtmMNSWAHSMWWLALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGY 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSK---LTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 242 GIIRITMTLDPLSKMLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLAQTQWSHTGSITLMIAHGL 321
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 322 TSSMLFCLANTNYERTHSRTLLLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIIVSLFNWSNVTILMTGLGTL 401
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 1593549716 402 ITATYTLYMLTTTQWGETPSHMKSIPPTHTREHLLMALHTLPMILLMTKPELI 454
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-454 |
4.48e-157 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 452.89 E-value: 4.48e-157
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 1 MLKIIIPTILLLPTTMLCKPKQLWSTTLTHSFGIAMLSLQWFKPTTePMAFSN--HYLGVDQISAPLLVLSCWLTPLMIL 78
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHW-SSSWHNlsLSLATDSLSSPLIILSCWLAPLSLL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 79 ASQNHLATEPSSRKRTFMITIILLQLSLILAFSSLELIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLTGSL 158
Cdd:MTH00044 80 ASINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 159 PLLVALSHMQIQNGTLSTHMMQLNQHTMMNSWAHSMWWLALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKL 238
Cdd:MTH00044 160 PLLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 239 GGYGIIRITMTLD-PLSKMLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLAQTQWSHTGSITLMI 317
Cdd:MTH00044 240 GGYGLIRLINLFSlPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMI 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 318 AHGLTSSMLFCLANTNYERTHSRTLLLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIIVSLFNWSNVTILMTG 397
Cdd:MTH00044 320 AHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIG 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 1593549716 398 LGTLITATYTLYMLTTTQWGETPSHMKSIPPTHTREHLLMALHTLPMILLMTKPELI 454
Cdd:MTH00044 400 LATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNII 456
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-454 |
2.36e-117 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 350.99 E-value: 2.36e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 1 MLKIIIPTILLLPttmLCKPKQLWSTTLTHSFGIAMLSLQWFKPTTEPMAFSNhYLGVDQISAPLLVLSCWLTPLMILAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIP---LCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISY-FFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 81 QNHLATEPSSRKrtFMITIILLQLSLILAFSSLELIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLTGSLPL 160
Cdd:MTH00163 77 ESVYKKNNYSNL--FLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 161 LVALSHMQIQNGTLSTHMMqlnqhtMMNSWAHSMWWLALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLL------NFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 241 YGIIRITMTLDPLSKMLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLAQTQWSHTGSITLMIAHG 320
Cdd:MTH00163 229 YGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 321 LTSSMLFCLANTNYERTHSRTLLLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIIVSLFNWSNVTILMTGLGT 400
Cdd:MTH00163 309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 1593549716 401 LITATYTLYMLTTTQWGETPSHMKSIPPTHTREHLLMALHTLPMILLMTKPELI 454
Cdd:MTH00163 389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLF 442
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-454 |
2.41e-112 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 338.25 E-value: 2.41e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 1 MLKIIIPTILLLPTTMLcKPKQLWSTTLTHSFGIAMLSLQWFKPTTEPMAFSNHYLGVDQISAPLLVLSCWLTPLMILAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLI-KYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 81 QNHLATEPSSRkrTFMITIILLQLSLILAFSSLELIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLTGSLPL 160
Cdd:MTH00014 80 FKIFQNNKAPK--TFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 161 LVALSHMQIQNGTLSTHMMQLNQHTMMNSwahSMWWLALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
Cdd:MTH00014 158 LMSILLIFYTNNSLSMLMSSMEPPSIYLM---NLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 241 YGIIRITMTLDPLSKMLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLAQTQWSHTGSITLMIAHG 320
Cdd:MTH00014 235 YGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 321 LTSSMLFCLANTNYERTHSRTLLLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIIVSLFNWSNVTILMTGLGT 400
Cdd:MTH00014 315 LCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITS 394
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 1593549716 401 LITATYTLYMLTTTQWGETPSHMKSIPPTHTREHLLMALHTLPMILLMTKPELI 454
Cdd:MTH00014 395 FLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLI 448
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
52-458 |
1.74e-111 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 334.89 E-value: 1.74e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 52 SNHYLGVDQISAPLLVLSCWLTPLMILASQNHLatEPSSRKRTFMITIILLQLSLILAFSSLELIMFFIAFETTLIPTLV 131
Cdd:MTH00150 16 LSELFSVDSMSSLLISLSLWISGLMMLASQKSV--KLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLL 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 132 IITRWGNQMERLNAGTYFLFYTLTGSLPLLVALSHMQIQNGTLSTHMMQ-LNQHTMMNSWahsmWWLALLIAFMIKMPLY 210
Cdd:MTH00150 94 LILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISsLRKLLSSMGL----WGLLVFLAFLVKLPMY 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 211 GLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSKMLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSS 290
Cdd:MTH00150 170 PFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSS 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 291 VSHMGLVIAATLAQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRTLLLTRNMQLLLPLMGLWWLLASLTNMALP 370
Cdd:MTH00150 250 VGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAP 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 371 PTINLMGELTIIVSLFNWSNVTILMTGLGTLITATYTLYMLTTTQWGETPSHMKSIPPTHTREHLLMALHTLPMILLMTK 450
Cdd:MTH00150 330 PSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILK 409
|
....*...
gi 1593549716 451 PELIWGMF 458
Cdd:MTH00150 410 SDLLFMWI 417
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
5-454 |
1.07e-102 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 313.45 E-value: 1.07e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 5 IIPTILLLPTTMLCKPKQLWSTTLTHSFGIAMLSLQWFKPTTEPMAFSNHYLGVDQISAPLLVLSCWLTPLMILASQNHL 84
Cdd:MTH00205 2 SIFGVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 85 atEPSSRKRTFMITIILLQLSLILAFSSLELIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLTGSLPLLVAL 164
Cdd:MTH00205 82 --KSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 165 SHMQIQNGTLSthmMQLNQHTMMNSWAHSMWWLALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGII 244
Cdd:MTH00205 160 FFLNSLNFSLS---MFFNFPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLI 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 245 RITMTLDPLSKMLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLAQTQWSHTGSITLMIAHGLTSS 324
Cdd:MTH00205 237 RITSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSS 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 325 MLFCLANTNYERTHSRTLLLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIIVSLFNWSNVTILMTGLGTLITA 404
Cdd:MTH00205 317 GMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSG 396
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 1593549716 405 TYTLYMLTTTQWGETPSHMKSIPPTHTREHLLMALHTLPMILLMTKPELI 454
Cdd:MTH00205 397 AYSLYLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIF 446
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
9-447 |
6.38e-85 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 268.87 E-value: 6.38e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 9 ILLLPTTMLCKPKQLWSTTLTHSFGIAMLSLQWFKPTTEPMAFSNHY-----------LGVDQISAPLLVLSCWLTPLMI 77
Cdd:COG1008 20 LLLLPRRNARLARWVALAVSLLTLLLSLYLLAGFDPGTGGFQFVESYpwipslgisyhLGVDGISLPLVLLTALLTPLAI 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 78 LASqnhlATEPSSRKRTFMITIILLQLSLILAFSSLELIMFFIAFETTLIPTLVIITRWGNQmERLNAGTYFLFYTLTGS 157
Cdd:COG1008 100 LAS----WNEIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGGE-RRIYAAIKFFLYTLAGS 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 158 LPLLVALSHMQIQNGTLSTHMMQLnQHTMMNSWAHSMWWLALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLK 237
Cdd:COG1008 175 LLMLVAILALYFLAGALTFDIAEL-AAAPLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLK 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 238 LGGYGIIRITMTLDPL-SKMLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLAQTQWSHTGSITLM 316
Cdd:COG1008 254 MGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFALNPLGLQGAVLQM 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 317 IAHGLTSSMLFCLANTNYERTHSRTLLLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIIVSLFNWSNVTILMT 396
Cdd:COG1008 334 VSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWLAILA 413
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 1593549716 397 GLGTLITATYTLYMLTTTQWGETPSHMKSIPPTHTREHLLMALHTLPMILL 447
Cdd:COG1008 414 ALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVLAPLAALILLL 464
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
53-447 |
5.36e-74 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 240.23 E-value: 5.36e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 53 NHYLGVDQISAPLLVLSCWLTPLMILASQNhlatEPSSRKRTFMITIILLQLSLILAFSSLELIMFFIAFETTLIPTLVI 132
Cdd:TIGR01972 70 SYHLGVDGISLLLVLLTALLTLLAILASWE----SIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 133 ITRWGNQmERLNAGTYFLFYTLTGSLPLLVALSHMQIQNGtLSTHMMQLNQHTMmNSWAHSMWWLALLIAFMIKMPLYGL 212
Cdd:TIGR01972 146 IGVWGGP-NRIYAAMKFFLYTLAGSLLMLLAILGLYFLGG-GTFDLLELLNLPL-PFGVQTWLFLAFFIAFAVKVPLFPL 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 213 HLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDP-LSKMLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSV 291
Cdd:TIGR01972 223 HTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSI 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 292 SHMGLVIAATLAQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRTLLLTRNMQLLLPLMGLWWLLASLTNMALPP 371
Cdd:TIGR01972 303 SHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPG 382
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1593549716 372 TINLMGELTIIVSLFNWSNVTILMTGLGTLITATYTLYMLTTTQWGE-TPSHMKSIPPTHTREHLLMALHTLPMILL 447
Cdd:TIGR01972 383 TSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGElSNPEVAEFPDLNGREIAVLAPLVVLILFL 459
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
23-454 |
1.06e-73 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 240.10 E-value: 1.06e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 23 LWSTTLThsFGIAMLSLQWFKPTTEPMAFS-----------NHYLGVDQISAPLLVLSCWLTPLMILASQNhlatEPSSR 91
Cdd:PRK05846 36 LIGTLLT--LLLSLVLWIGFDSSNAGFQFVekhpwiprfgiSYHLGVDGISLLLVVLTALLTPLAVLASWE----EIKKR 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 92 KRTFMITIILLQLSLILAFSSLELIMFFIAFETTLIPTLVIITRWGNQmERLNAGTYFLFYTLTGSLPLLVALSHM--QI 169
Cdd:PRK05846 110 VKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWGGK-NRIYAATKFFLYTLLGSLLMLVAIIYLvvVY 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 170 QNGTLSTHMMQLNQHTMMNSWAHSMWwLALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMT 249
Cdd:PRK05846 189 YNATGTFDIADLLNLPLPPGVQYWLF-LAFFIAFAVKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLP 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 250 LDPL-SKMLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLAQTQWSHTGSITLMIAHGLTSSMLFC 328
Cdd:PRK05846 268 LFPDaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFL 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 329 LANTNYERTHSRTLL----LTRNMQLLLPLMglwwLLASLTNMALPPTINLMGELTIIVSLFNWSNVTILMTGLGTLITA 404
Cdd:PRK05846 348 LVGVLYDRLHTRDIAdyggLAKVMPVLAAFF----LFFAMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAA 423
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 1593549716 405 TYTLYMLTTTQWGETPSHMKSIPPTHTREHLLMALHTLPMILLMTKPELI 454
Cdd:PRK05846 424 VYSLWLYQRVMFGPVKNEVAKLKDLNGRELLILLPLVALLLLLGVYPKPL 473
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
112-400 |
2.58e-72 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 229.89 E-value: 2.58e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 112 SLELIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLTGSLPLLVALSHMQIQNGTLSTHMMQLNQHTMMNSWA 191
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 192 HSMWWLALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSKMLSYPFMVMALWGVIM 271
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 272 TSSICLRQTDLKSLIAYSSVSHMGLVIAATLAQTQWSHTGSITLMIAHGLTSSMLFCLA-NTNYERTHSRTLLLTRNMQL 350
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1593549716 351 LLPLMGLWWLLASLTNMALPPTINLMGELTIIVSLFNWSNVTILMTGLGT 400
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
35-404 |
7.96e-65 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 216.46 E-value: 7.96e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 35 AMLSLQWFkPTTEPmAFSNHYLGVDQISAPLLVLSCWLTPLMILASQNHLatepSSRKRTFMITIILLQLSLILAFSSLE 114
Cdd:MTH00217 57 AIKKFEWI-PGIEP-VFGPVVFAVDGISIFFLILTALLTPICILISWNSI----KFLIKEFLLCLLVIEILLMGVFTILD 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 115 LIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLTGSLPLLVALSHMQIQNGTlsTHMMQLNQHTMMNSWAHSM 194
Cdd:MTH00217 131 LVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGT--TDYQALCCLKIEKELQYFI 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 195 WwLALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSKMLSYPF-MVMALWGVIMTS 273
Cdd:MTH00217 209 F-LGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLiQTLSLLAIIYGS 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 274 SICLRQTDLKSLIAYSSVSHMGLVIAATLAQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRTLLLTRNMQLLLP 353
Cdd:MTH00217 288 LTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMP 367
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 1593549716 354 LMGLWWLLASLTNMALPPTINLMGELTIIVSLFNWSNVTILMTGLGTLITA 404
Cdd:MTH00217 368 LFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSA 418
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
40-454 |
1.72e-62 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 210.30 E-value: 1.72e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 40 QWFKPTTEPMAFSNHYLGVDQISAPLLVLSCWLTPLMILASQN---HLATEpssrkrtFMITIILLQLSLILAFSSLELI 116
Cdd:MTH00204 63 EWIISPTLNFQWGPLVFAVDGVSLFFILLTTLLIPICILISWKsikFLFKE-------FLLCLLFLEVLLIGVFSVLDLL 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 117 MFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLTGSLPLLVALSHMQIQNGTLSTHMMqLNQHTMMNSwahSMWW 196
Cdd:MTH00204 136 LFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQIL-LNIKLPLSI---QKWL 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 197 LA-LLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSKMLSYPFMVM-ALWGVIMTSS 274
Cdd:MTH00204 212 LVgFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVMlSVIAVIYGSL 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 275 ICLRQTDLKSLIAYSSVSHMGLVIAATLAQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRTLLLTRNMQLLLPL 354
Cdd:MTH00204 292 TTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPL 371
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 355 MGLWWLLASLTNMALPPTINLMGELTIIVSLFNWSNVTILMTGLGTLITATYTLYMLTTTQWGETPSHMKSIPPTHTREH 434
Cdd:MTH00204 372 FVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLLFSRDLNRREL 451
|
410 420
....*....|....*....|
gi 1593549716 435 LLMALHTLPMILLMTKPELI 454
Cdd:MTH00204 452 LAILPLIIAIFLLGIVPFII 471
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
56-404 |
2.01e-60 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 205.54 E-value: 2.01e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 56 LGVDQISAPLLVLSCWLTPLMILASQNHLatepSSRKRTFMITIILLQLSLILAFSSLELIMFFIAFETTLIPTLVIITR 135
Cdd:MTH00226 98 FAVDGISIYFIILTGFIVPCSILISWHSV----KYLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGI 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 136 WGNQMERLNAGTYFLFYTLTGSLPLLVALSHMQIQNGTlsTHMMQLNQHTMMNSWAHSMW-WLALLIAFMIKMPLYGLHL 214
Cdd:MTH00226 174 WGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGT--TDYLTLASCSHVVSEQTQKWiFLGIFLAMAVKIPIFPFHI 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 215 WLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPL-SKMLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSH 293
Cdd:MTH00226 252 WLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAH 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 294 MGLVIAATLAQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRTLLLTRNMQLLLPLMGLWWLLASLTNMALPPTI 373
Cdd:MTH00226 332 MGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSG 411
|
330 340 350
....*....|....*....|....*....|.
gi 1593549716 374 NLMGELTIIVSLFNWSNVTILMTGLGTLITA 404
Cdd:MTH00226 412 NFIGEYLSILSSFNWNPIIGVFVCSGVILSA 442
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
56-403 |
3.09e-50 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 177.92 E-value: 3.09e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 56 LGVDQISAPLLVLSCWLTPLMILASQNhlatePSSRKRTFMITIILLQLSLILAFSSLELIMFFIAFETTLIPTLVIITR 135
Cdd:PRK12561 55 LGVDGLSMPLVLLSGLITTLSIFASWK-----VTRKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISI 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 136 WGNQmERLNAGTYFLFYTLTGSLPLLVALSHMQIQNGTLSTHMMQLNQHTMMNSWAhSMWWLALLIAFMIKMPLYGLHLW 215
Cdd:PRK12561 130 WGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAKSYPLALE-LLLYAGFLIAFGVKLPIFPLHTW 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 216 LPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSKMLSYPfmVMALWGV--IMTSSIC-LRQTDLKSLIAYSSVS 292
Cdd:PRK12561 208 LPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAP--ALAILGVvnIIYGALNaFAQDNVKRRLAYSSVS 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 293 HMGLVIAATLAQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRTLLLTRNMQLLLPLMGLWWLLASLTNMALPPT 372
Cdd:PRK12561 286 HMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGM 365
|
330 340 350
....*....|....*....|....*....|....*...
gi 1593549716 373 INLMGELTIIVSLFN-------WSNVTILMTGLGTLIT 403
Cdd:PRK12561 366 SGFVSELTVFLGITSsdvysstFRTITILLAAVGLILT 403
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
110-395 |
1.42e-47 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 168.55 E-value: 1.42e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 110 FSSLELIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLTGSLPLLVALSHmqiqngtlSTHMMQLNQHTMMNS 189
Cdd:MTH00094 79 FVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLK--------NFFFFSLCYFDFFLS 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 190 WahsMWWLALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRItmtLDPLSKMLSYPFMVMALWGV 269
Cdd:MTH00094 151 W---EMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRI---LGSLNFVYNNFWIIFSLLGM 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 270 IMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLAQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRTLLLTRNMQ 349
Cdd:MTH00094 225 ILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFF 304
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1593549716 350 LLLPLMGLWWLLASLTNMALPPTINLMGELTIIVSLFNWSNVTILM 395
Cdd:MTH00094 305 SSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFF 350
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
23-446 |
4.54e-46 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 166.80 E-value: 4.54e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 23 LWSTTLTHSFGIAMLSLQW--FKPTTEPMAFSNHyLGVDQISAPLLVLSCWLTPLMILASQNHLatepsSRKRTFMITII 100
Cdd:PRK06473 41 LLSLVLAFQFDPGNPNQQFteFIPWIDSLGLSYH-LGVDGLSLPLLVLNSLLTLIAIYSSDESI-----QRPRFYYSLLL 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 101 LLQLSLILAFSSLELIMFFIAFETTLIPTLVIITRWGNQmERLNAGTYFLFYTLTGSLPLLVALSHMQIQNGTLSTHMMQ 180
Cdd:PRK06473 115 LLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEP 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 181 LNQHTMMNSwAHSMWWLALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSKMLSYP 260
Cdd:PRK06473 194 LRSHTLPLS-TQLLLLAPILVGFGIKIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAP 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 261 FM-VMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLAQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHS 339
Cdd:PRK06473 273 WLaTWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGS 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 340 RTLLLTR---NMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIIVSLFNWSNVTILMTGLGTLITATYTLYMLTTTQW 416
Cdd:PRK06473 353 RDVDVLRgllNPERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFF 432
|
410 420 430
....*....|....*....|....*....|.
gi 1593549716 417 GETPSHMKSIPPTHTREHL-LMALHTLPMIL 446
Cdd:PRK06473 433 GRLTAELSNLPRVLWSERLpALVLAVLIVVL 463
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
56-402 |
1.44e-41 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 152.99 E-value: 1.44e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 56 LGVDQISAPLLVLSCWLTPLMILASQNHLATEpsSRKRTFMITIILLQLSLILAFSSLELIMFFIAFETTLIPTLVIITR 135
Cdd:COG0651 72 LVADRLSALFLLLTALVALAVLLYSIGYMRHE--RRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVAL 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 136 WGNQmERLNAGTYFLFYTLTGSLPLLVALSHMQIQNGTLSTHMMQLNQHTMMNSWAHSMWWLaLLIAFMIKMPLYGLHLW 215
Cdd:COG0651 150 GGTK-EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLLAAFAL-LLVGFGIKAALFPLHFW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 216 LPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDP--LSKMLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSH 293
Cdd:COG0651 228 LPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQ 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 294 MGLVIAATLAQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRTLLLTRNMQLLLPLMGLWWLLASLTNMALPPTI 373
Cdd:COG0651 308 IGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLS 387
|
330 340 350
....*....|....*....|....*....|...
gi 1593549716 374 NLMGELTIIVSLFN----WSNVTILMTGLGTLI 402
Cdd:COG0651 388 GFVSKWLLLQAALEagawLLAAVLLLSSLLTLA 420
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
56-370 |
3.56e-39 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 147.78 E-value: 3.56e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 56 LGVDQISAPLLVLSCWLTPLMILASQnhlatePSSRK-RTFMITIILLQLSLILAFSSLELIMFFIAFETTLIPTLVIIT 134
Cdd:CHL00011 80 LGIDGLSIGPILLTGFITTLATLAAW------PVTRNsRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLS 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 135 RWGNQmERLNAGTYFLFYTLTGSLPLLVALSHMqiqnGTLSTHMMQLNQHTMMN-SWAHSM---WWLALLIAFMIKMPLY 210
Cdd:CHL00011 154 MWGGK-KRLYSATKFILYTAGGSIFLLIGVLGM----GLYGSNEPTLNFETLANqSYPVALeilFYIGFLIAYAVKLPII 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 211 GLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSKMLSYPF-MVMALWGVIMTSSICLRQTDLKSLIAYS 289
Cdd:CHL00011 229 PLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWlVIVGAIQIIYAASTSLGQRNLKKRIAYS 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 290 SVSHMGLVIAATLAQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERThsRTLLLTR--NMQLLLPLMGLWWLLASLTNM 367
Cdd:CHL00011 309 SVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYLDEmgGIAIPMPKIFTMFSSFSMASL 386
|
...
gi 1593549716 368 ALP 370
Cdd:CHL00011 387 ALP 389
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
56-383 |
1.98e-38 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 146.00 E-value: 1.98e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 56 LGVDQISAPLLVLSCWLTPLMILAsqnhlATEPSSRKRTFMITIILLQLSLILAFSSLELIMFFIAFETTLIPTLVIITR 135
Cdd:PRK02546 83 VGADGLSMPLILLTGFITTLAVLA-----AWPVTFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAI 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 136 WGNQmERLNAGTYFLFYTLTGSLPLLVALSHMQIQNGTLSTHMMQLNQHTMMNSWaHSMWWLALLIAFMIKMPLYGLHLW 215
Cdd:PRK02546 158 WGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGF-QLLCYAGLLIAYGVKLPIVPLHTW 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 216 LPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSKMLSYPFM-VMALWGVIMTSSICLRQTDLKSLIAYSSVSHM 294
Cdd:PRK02546 236 LPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLiVLGVVNIIYAALTSFAQRNLKRKIAYSSISHM 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 295 GLVIAATLAQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRTLLLTRNMQLLLPLMGLWWLLASLTNMALPPTIN 374
Cdd:PRK02546 316 GFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSG 395
|
....*....
gi 1593549716 375 LMGELTIIV 383
Cdd:PRK02546 396 FVAELMVFV 404
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
23-329 |
2.11e-34 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 134.45 E-value: 2.11e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 23 LWSTTLTHSFGIAMLSLQW--FKPTTEPMAFSnHYLGVDQISAPLLVLSCWLTPLMILASqnhlaTEPSSRKRTFMITII 100
Cdd:PRK07363 41 AWSLFLLTQFDLSDPGMQFqeYLPWNEPLGLS-YSLGVDGLSLPLLVLNSLLTWIAIYSI-----GENTERPRLYYSLIL 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 101 LLQLSLILAFSSLELIMFFIAFETTLIPTLVIITRWGNQmERLNAGTYFLFYTLTGSLPLLVALSHMQIQNGTLSTHMMQ 180
Cdd:PRK07363 115 LINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDA 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 181 LNQHTMMNSwAHSMWWLALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSKMLSYP 260
Cdd:PRK07363 194 ISTQNLSLN-TQLILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP 272
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1593549716 261 fmVMALWG---VIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLAQTQWSHTGSITLMIAHGLTSSMLFCL 329
Cdd:PRK07363 273 --GLAIIGtisVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHL 342
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-96 |
1.73e-22 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 91.82 E-value: 1.73e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 1 MLKIIIPTILLLPTTMLCKPKQLWSTTLTHSFGIAMLSLQWFK-PTTEPMAFSNHYLGVDQISAPLLVLSCWLTPLMILA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNnPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90
....*....|....*..
gi 1593549716 80 SQNHLATEPSSRKRTFM 96
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFI 97
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-459 |
6.15e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 98.50 E-value: 6.15e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 58 VDQISAPLLVLSCWLTPLMILASQNHLatEPSSRKRTFMITIILLQLSLILAFSSLELIMFFIAFETTLIPTLVIITRWG 137
Cdd:PRK12667 80 VDLLGALLGLLTALVMFLILIYSYWYL--EHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 138 NQMERLNAGTYFLFYTLTGSLPLLVALSHMQIQNGTLSTHMMQLNQHTMM---------NSWAHSMWWLAL-LIAFMIKM 207
Cdd:PRK12667 158 DRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLSfpltgglagNPPLALGVALALaLWAFTIKA 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 208 PLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMT-------LDPLSKMLSYPFMVMALWGVIMTSSICLRQT 280
Cdd:PRK12667 238 AIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTifgispsLIDFRAALSPILIILGAVSAIIGALMMVVQK 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 281 DLKSLIAYSSVSHMGLVIAATLAQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRTLLLTRNMQLLLPLMGLWWL 360
Cdd:PRK12667 318 DVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFL 397
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 361 LASLTNMALPPTINLMGELTIIVSLFNWSNVTILMTGLGTLITATYTLYMLTTTQWGETPshmKSIPPTHTREHLLMALh 440
Cdd:PRK12667 398 IGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYSLFFGKP---KSGEEVEHKESPSMSV- 473
|
410
....*....|....*....
gi 1593549716 441 tlpMILLMTKPELIWGMFY 459
Cdd:PRK12667 474 ---VILVLALAVLILGILA 489
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
56-402 |
4.43e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 95.72 E-value: 4.43e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 56 LGVDQISAPLLVLSCWLTPLMILASQNhlATEPSSRKrtFMITIILLQLSLILAFSSLELIMFFIAFETTLIPTLVIITR 135
Cdd:PRK08375 73 LRADSLSALFLLVTSILAIAALLYAIG--YGEHRQTR--FYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAM 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 136 WGNQmERLNAGTYFLFYTLTGSLPLLVALSHMQIQNGTLsthmmqlNQHTMMNSWAHSMWWLA----LLIAFMIKMPLYG 211
Cdd:PRK08375 149 GGDR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTL-------NMADLAGALAENPTVVTafgfVLLALALKAAVFP 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 212 LHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSKM----LSYPFMVMALWGVIMTSSICLRQTDLKSLIA 287
Cdd:PRK08375 221 LHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRfalgLGWLLAVLALLSMLVGSLAALGQDDVKRVLA 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 288 YSSVSHMGLVIAATLAQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRTLL----LTRNMqlllPLMGLWWLLAS 363
Cdd:PRK08375 301 YSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSelsgLGRRM----PLTAAAFAVAS 376
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1593549716 364 LTNMALPPTINLMGELTIIVSLFN----WSNVTILMTGLGTLI 402
Cdd:PRK08375 377 LSLIGVPPTSGFVSKWYLVVGAVEagqwLVLAVLLASSLLALL 419
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
199-448 |
7.27e-19 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 88.83 E-value: 7.27e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 199 LLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLD--PLSKMLSYPFMVMALWGVIMTSSIC 276
Cdd:PRK06458 220 LLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDaaIGSDFPGRLLLIFGLLSVLVAAFFL 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 277 LRQTDLKSLIAYSSVSHMGLVIAATLAQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRTLLLTRNMQLLLPLMG 356
Cdd:PRK06458 300 LRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTG 379
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 357 LWWLLASLTNMALPPTINLMGELTIIVSLFN---WSNVTILMTGLGTLITATYTLYmltttqwgeTPSHMKSIPPTHTRe 433
Cdd:PRK06458 380 WGLMLGALAIAGMPPFGVFISEFLILTAGLArgpLLIAILLLLLLTLAFAALVRRV---------AGMVFGEPPEAVNR- 449
|
250
....*....|....*
gi 1593549716 434 HLLMALHTLPMILLM 448
Cdd:PRK06458 450 GDLGWLTTSPMFVHL 464
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
115-394 |
3.50e-17 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 83.05 E-value: 3.50e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 115 LIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLTGSLPLLVALSHMQIQNGTLSthmmqLNQHTMMNSWAHSM 194
Cdd:MTH00062 93 SLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFN-----FSDWGSDDSVSLIV 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 195 WWLaLLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSkMLSYPFMVMALWGVIMTSS 274
Cdd:MTH00062 168 YYV-LSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGS-FLGYLFLCCLFSVFFLITA 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 275 icLRQTDLKSLIAYSSVSHMgLVIAATLAQTQWSHTG-SITLMIAHGLTSSMLFCLANTNYERTHSRTLLLTRNMQLLLP 353
Cdd:MTH00062 246 --CSELDGKRWLAFLSLSHI-LVPVLGLFVGDWSSINlSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSL 322
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 1593549716 354 LMGLWWLLASLTNMALPPTINLMGELTIIVSLFNWSNVTIL 394
Cdd:MTH00062 323 VLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYLLF 363
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
145-386 |
4.99e-14 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 74.38 E-value: 4.99e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 145 AGTYFLFYTLTGSLPLLVALSHMQIQNGTLSTHMMQlnqhtmMNSWAHSMWWLALLIAFMIKMPLYGLHLWLPKAHVEAP 224
Cdd:PRK08667 163 AGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLG------ASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASP 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 225 IAGSMILAAVLLKLGGYGIIRITMtlDPLSKMLSYPF------MVMALWGVIMTssicLRQTDLKSLIAYSSVSHMGLVI 298
Cdd:PRK08667 237 SNVSALMSGVMLKVAVYGLVRFLM--DVLSPELWWGVlillagSISALLGVIYA----LKEHDLKGLLAYSSIENIGIIL 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 299 AATLAQTQWSHTGSITLM-----------IAHGLTSSMLFCLANTNYERTHSRTLLLTRNMQLLLPLMGLWWLLASLTNM 367
Cdd:PRK08667 311 MGIGLYVIFGVYGLDTLAllalggalfhsLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIA 390
|
250
....*....|....*....
gi 1593549716 368 ALPPTINLMGELTIIVSLF 386
Cdd:PRK08667 391 ALPPFNGFASELLLYESFF 409
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-403 |
7.31e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 73.45 E-value: 7.31e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 109 AFSSLELIMFFIAFETTLIPTLVIITrWGNQMERLNAGTYFLFYTLTGSLPLLVALSHMQIQNGTLSthmmqLNQHTMMN 188
Cdd:PRK07234 110 AFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFA-----FSGLATAD 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 189 SWAhsmwwLALLIA-FMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSKMLSYPFMVMALW 267
Cdd:PRK07234 184 PEA-----FALIALgLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRIFGVGTALL 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 268 GVImtssICLRQTDLKSLIAYSSVSHMGLVIAATLaqtqwshTGSItLMIAHGLTSSMLFCLANTNYERTHSRTLLLTRN 347
Cdd:PRK07234 259 GVL----FALLEKDLKRMLAFSTISQLGFILAAPL-------VGGL-YALAHGLVKSTLFLCAGALPSRNFTELISQMLG 326
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1593549716 348 MQLLLPLmglwwLLASLTNMALPPTINLMGELTIIVSLFNWSNVTILMTGLGTLIT 403
Cdd:PRK07234 327 IGKWIPL-----TMASFSIAGFPLLAGFVSKVLTLKNLLPWQAIALNLAAVGTAAS 377
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
110-327 |
2.27e-13 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 72.34 E-value: 2.27e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 110 FSSLELIMFFIAFETTLIPTLVIITRwGNQMERLNAGTYFLFYTLtGSLPLLVALSHMQIQNGTLSTHmmQLNQHTMMNS 189
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVLSAI-GAYAMLYAIFLIYAKTGTFDFA--DISQGLINDT 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 190 WAHSMWWLALLIAFM--IKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIrITMTLDPLSKMLS--------- 258
Cdd:PRK08668 191 STGFALIVFLFLLAFgvAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFL-LVLYVLPGTKLFSefgtyrgvp 269
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1593549716 259 ---YPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLAQTQWSHTGSITLMIAHGLTSSMLF 327
Cdd:PRK08668 270 lfnYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
156-387 |
3.11e-13 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 71.34 E-value: 3.11e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 156 GSLPLLVALSHMQIQNGTLSthMMQLNQH-TMMNSWAHSMWWLALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAV 234
Cdd:PRK08377 170 GSSFFLIGVALIYGATGTLN--MAHIAQLaGTIDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAF 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 235 LLKLGGYGIIRITMTLDPLSKMLSYPFMV--MALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLAQTQWSHTGS 312
Cdd:PRK08377 248 VVKAGLYAMARILYLMQNANGWSSVLKLViiMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAG 327
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1593549716 313 ITLMIAHGLTSSMLFCLANTNYERTHSRTLLLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIIVSLFN 387
Cdd:PRK08377 328 VFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLS 402
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
56-382 |
1.15e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 69.61 E-value: 1.15e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 56 LGVDQISAPLLVLSCWLT-PLMILASQNHLAT----EPSSrkrTFMITIILLQLSLILAFSSLELIMFFIAFETTLIPTL 130
Cdd:PRK12665 72 LVVDRLSALMLVVSSVVLlAVLVYAIGQGIRDgdeeQPVS---IFLPTYLILVAGVSNAFLAGDLFNLYVGFEILLVASY 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 131 VIITRwGNQMERLNAGTYFLFYTLTGSLPLLVALSHMQIQNGT-----LSTHMMQLNQHTMMnswahsMWWLALLIAFMI 205
Cdd:PRK12665 149 VLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTlnmadLAVRLDELPSGTRT------ALFAVLLVAFGI 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 206 KMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPlSKMLSYPFMVMALWGVIMTSSICLRQTDLKSL 285
Cdd:PRK12665 222 KAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-GGGLDTLLMVVALLTMVVGILGAIAQSDIKRL 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 286 IAYSSVSHMGLVIAATLAQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRTLlltRNMQLLL---PLMGLWWLLA 362
Cdd:PRK12665 301 LSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSL---RRLGGLAkasPLLAVLFFVP 377
|
330 340
....*....|....*....|
gi 1593549716 363 SLTNMALPPTINLMGELTII 382
Cdd:PRK12665 378 ALNLGGIPPFSGFIGKVALL 397
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
112-401 |
3.23e-12 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 68.08 E-value: 3.23e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 112 SLELIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFyTLTGSLPLLVALSHMQIQNGTLS-THMMQLNQHTmmnsw 190
Cdd:PRK06525 132 SSTLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLI-THIGSLGLYLAAATLFLQTGTFAlSALSGLHGSL----- 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 191 aHSMWWLALLIAFMIKMPLYGLHLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGIIRITMTLDPLSKMLSYPFMVMALWGV 269
Cdd:PRK06525 206 -KYLVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTL 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 270 IMTSSICLRQTDLKSLIAYSSVSHMGL-VIAATLA--QTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRTLLLTR 346
Cdd:PRK06525 284 LYGFLMYLPQQDMKRLLAYSTITQLGYmFFGLSLAilGSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLR 363
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1593549716 347 NMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIIVSLFNWSNVTILMTGLGTL 401
Cdd:PRK06525 364 GVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVL 418
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
197-385 |
9.49e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 66.70 E-value: 9.49e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 197 LALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTL--DPLSKMLSYPFMVMALWGVIMTSS 274
Cdd:PRK08676 210 LFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLrqSGAAEQFSNVLIGLGIFSIAVAAF 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 275 ICLRQTDLKSLIAYSSVSHMGLVIAATLAQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRTLLLTRNMQLLLPL 354
Cdd:PRK08676 290 SMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPV 369
|
170 180 190
....*....|....*....|....*....|.
gi 1593549716 355 MGLWWLLASLTNMALPPTINLMGELTIIVSL 385
Cdd:PRK08676 370 AAWGVILGSAAIIGMPPFPLFLSKFFILLQL 400
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
114-372 |
1.81e-11 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 66.60 E-value: 1.81e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 114 ELIMFFIAFETTLIPTLVIITRWGNQMERLNAGTyfLFYTLTGSLPLLVALSHMQIQNGTLSTHMMQLNqhtmmNSWAHS 193
Cdd:PRK12650 131 DVVVLFVAWELVSLASFFLIARSGSGGEAGSIRT--LILTFFGGLTLLAAVAIAATQTGTTSLSGILHS-----DVWAEK 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 194 MWWLALlIAFMIKMPLYG------LHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRIT--MTLDPLSKMLsypFMVMA 265
Cdd:PRK12650 204 PGLTTV-VAVLIAVAAFTksaqfpFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSpvFHDVAVWNWL---LIIVG 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 266 LWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLAQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRTLLLT 345
Cdd:PRK12650 280 MITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRL 359
|
250 260
....*....|....*....|....*..
gi 1593549716 346 RNMQLLLPLMGLWWLLASLTNMALPPT 372
Cdd:PRK12650 360 GSLWRRMPFTFVSVTIAALSMAAVPPL 386
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
172-373 |
1.95e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 65.91 E-value: 1.95e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 172 GTLSTHMMQLNQHTMMNSWAHSMWWLALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMT-- 249
Cdd:PRK12662 188 GTLNMGDMFLIIQDLPTNRAIQIGVLFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDvf 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 250 ---LDPLSKMLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLAQTQWSHTGSITLMIAHGLTSSML 326
Cdd:PRK12662 268 kanFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSAL 347
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1593549716 327 FCLANT---NYERTHSRTLLltrNMQLLLPLMGLWWLLASLTNMALPPTI 373
Cdd:PRK12662 348 FMVSGSisyHFGTTKLEDCL---NLWKSMPKITLAFVLLSLSLIGMPPTS 394
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
116-370 |
3.80e-11 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 65.55 E-value: 3.80e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 116 IMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLTGSLPLLVALSHMQIQNGTLS-THMMQLNQHTMMNSWAHSM 194
Cdd:PRK12646 133 ILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNiTEILGQADHIKNHGLFIPM 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 195 WWLALLIAFMiKMPLYGLHLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGIIRITMTLDpLSKMLSYPFMVMALWGVIMTS 273
Cdd:PRK12646 213 IFMFLLGAFT-KSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTPLLG-LSNMYIYIVTFVGLITMLFGS 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 274 SICLRQTDLKSLIAYSSVSHMGLV-----IAATLAQTQWSHTGSITLMIA---------HGLTSSMLFCLANTNYERTHS 339
Cdd:PRK12646 290 ITALKQWDLKGILAYSTISQLGMImamvgIGGGYAQHQQDAIASIYVFVLfaalfhlmnHAIFKCALFMGVGIIDHEAGT 369
|
250 260 270
....*....|....*....|....*....|.
gi 1593549716 340 RTLLLTRNMQLLLPLMGLWWLLASLTNMALP 370
Cdd:PRK12646 370 RDIRILSGMRQLFPKMNLVMTIAALSMAGVP 400
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-401 |
4.28e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 61.50 E-value: 4.28e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 109 AFSSLELIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFyTLTGSLPLLVALSHMQIQNGTL-----STHMMQLNQ 183
Cdd:PRK07691 124 AFLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQLRESIKYVLI-NVVSSAFFVVAVAILYSVVGTLnmadiSVKIAELSA 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 184 HtmmNSWAHSMWWLALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRI-TMTLDPLSKMLSYPFM 262
Cdd:PRK07691 203 G---QTGLITVVAILFLFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTfTLFFSHDTSFTHYLIL 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 263 VMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLAQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRTL 342
Cdd:PRK07691 280 ILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDL 359
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1593549716 343 lltRNMQLLL---PLMGLWWLLASLTNMALPPTINLMGELTIIVSLFN----WSNVTILMTGLGTL 401
Cdd:PRK07691 360 ---KKMGGLIkryPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEagfyVSGIIVLLSSLLVL 422
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-392 |
4.66e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 61.37 E-value: 4.66e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 109 AFSSlELIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLTGSLPLLVALSHMQIQNGTLSThmmqlnQHTMMN 188
Cdd:PRK06589 133 ALSS-DLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDF------VSGGLF 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 189 SWAHSMWWLALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSKMLSYPFM-----V 263
Cdd:PRK06589 206 SKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFAEfnwliF 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 264 MALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLAQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRTLL 343
Cdd:PRK06589 286 IPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVD 365
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 1593549716 344 LTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIIVSLFNWSNVT 392
Cdd:PRK06589 366 KLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPW 414
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
114-371 |
5.33e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 61.27 E-value: 5.33e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 114 ELIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLTGSLPLLVALSHMQIQNGTLSTHMMQLNQHtmMNSWAHS 193
Cdd:PRK08376 142 DLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMS--ENPTVVA 219
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 194 MWWLALLIA-FMIKMPLYGLHLWLPKAHVEAPIAGSMILaaVLLKLGG-YGIIRITMTLDPLSKMLSYPFMVMALWGV-- 269
Cdd:PRK08376 220 KIALALFIAgLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLFSIYGPAINLATVGWVIIILGClt 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 270 -IMTSSICLRQTDLKSLIAYSSVSHMGLVI------AATLAQTQWSHTGSITL------MIAHGLTSSMLFCLANTNYER 336
Cdd:PRK08376 298 mFVGVAMAVVQKDVKRLLAYHSVSQIGYMLlglgvgLAALGDPAMASYGEIALaggiyhIVNHALYKALLFLTAGAVIYE 377
|
250 260 270
....*....|....*....|....*....|....*....
gi 1593549716 337 THSRTLL----LTRNMqlllPLMGLWWLLASLTNMALPP 371
Cdd:PRK08376 378 TGTRNLNelggLARTM----PKTTIAFLIGAAAIVGLPP 412
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
117-371 |
6.01e-10 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 61.44 E-value: 6.01e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 117 MFFIAFET-TLIPTLVIITrwgNQMERLNAGTYFLFYTLT--GSLPLLVALSHMQIQNGTLSTHMMQLNQHTmmnSWAHS 193
Cdd:PRK06521 137 SFLVAWETmSLSSWFLVIA---NHREAEIRRAGFLYLLMAhaGALAILLAFGLLARESGSYDFAAMRAAHLS---PFWAS 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 194 MWWLALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSkMLSYPFMVMALWGVIMTS 273
Cdd:PRK06521 211 LVFLLALFGFGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFDLLGAP-GWWWGVLVLALGAISAVL 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 274 SI--CLRQTDLKSLIAYSSVSHMGLVI----------------AATLAQtqwshTGSITLMIAHGLTSSMLFCLANTNYE 335
Cdd:PRK06521 290 GVlyALAEHDLKRLLAYSTIENIGIIFvglglamvfiaygmplLAALAL-----TAALYHLLNHALFKSLLFLGAGAVLH 364
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1593549716 336 RTHSRTLL----LTRNMqlllPLMGLWWLLASLTNMALPP 371
Cdd:PRK06521 365 ATGTRDMEklggLIRRM----PWTAWAFLIGCLAISALPP 400
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
115-401 |
8.97e-10 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 61.09 E-value: 8.97e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 115 LIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLTGSLPLLVALSHMQIQNGTLSTHMMqlnqHTMMNSWAHSM 194
Cdd:PRK12647 117 LITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSEL----LASGDVIREHP 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 195 WWLALLIAFMI----KMPLYGLHLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGIIRITMTLDPlskmlsypfmvMALWGV 269
Cdd:PRK12647 193 LYLAILLLVLGgaftKSAQFPFHFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLARLNPVLGG-----------TPLWQT 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 270 IMT----------SSICLRQTDLKSLIAYSSVSHMGLVIAATLAQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHS 339
Cdd:PRK12647 261 ILPlfggltmltgALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGT 340
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1593549716 340 RTLLLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIIVSLFNWSNVTILMTGLGTL 401
Cdd:PRK12647 341 RDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
148-300 |
6.75e-09 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 57.98 E-value: 6.75e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 148 YFLFYTLTGSLpLLVALSHMQIQNGTLSThmmqlnqhTMMNSWAHSMWWLALlIAFMIKMPLYGLHLWLPKAHVEAPIAG 227
Cdd:PRK12668 148 YLLVHVLGGVL-LLAGILLHYAETGSFAF--------GAIAGLGGTAAWLIL-IGFGVNAAFPPLHAWLPDAYPEATVTG 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1593549716 228 SMILAAVLLKLGGYGIIRitmtLDPLSKMLSYPFMVMALWGVIMTssicLRQTDLKSLIAYSSVSHMGLVIAA 300
Cdd:PRK12668 218 SVFLSAFTTKTAVYALAR----AFPGTELLIYIGAAMAVYGVFFA----LLENDLRRLLSYHIVSQVGYMVAG 282
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
109-457 |
4.43e-08 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 55.34 E-value: 4.43e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 109 AFSSLELIMFFIAFETTLIPTLVIITrWGNQMERLNAGTYFLFYTLTGSLPLLVALSHMQIQNGTLS-THM-MQLNQhtM 186
Cdd:PRK12663 124 SFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNmAHIaMRLND--M 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 187 MNSWAHSMWWLALLIAFMIKMPLYGLHlWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRI-TMTLDPLSKMLSYPFMVMA 265
Cdd:PRK12663 201 GDTATLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVfTLLFPQERELLHPLLATMA 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 266 LWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLAQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRTLLLT 345
Cdd:PRK12663 280 AITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYL 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 346 RNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIIVSLFNWSNVTILMTGLGT-LITATYTLYMLTTTQWGETPSHMK 424
Cdd:PRK12663 360 GGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITsLITMYSLFRIFFLAYWGDKDGEEV 439
|
330 340 350
....*....|....*....|....*....|...
gi 1593549716 425 SIPPTHTREHLLMALHTLPMILLMTKPELIWGM 457
Cdd:PRK12663 440 NFKPIPLYRKLPLSILAVVVIAMGIAAEPLLNL 472
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
111-306 |
7.00e-08 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 54.57 E-value: 7.00e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 111 SSLELIMFFIAFETTLIPTLVIITRWGNQMERLNAG-TYFLFYTLTGSLpLLVALSHMQIQNGTLSTHMMQLNQHTMMNS 189
Cdd:TIGR01770 120 SSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGlKYFILGAFSSGL-LLFGISLIYGFTGSLNFEDLLLFLSNGMLN 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 190 -WAHSMWWLALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLlKLGGYGI-IRITMT-LDPLSKMLSYPFMVMAL 266
Cdd:TIGR01770 199 iSLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVP-KIAIFAVfLRLFLYiLFGFSEAWQIFLAIIAF 277
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1593549716 267 WGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLAQTQ 306
Cdd:TIGR01770 278 LSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTL 317
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
197-448 |
1.50e-07 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 53.62 E-value: 1.50e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 197 LALLIAFMIKMPLYGLHLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGIIRitmtLDPLSKMLSYPFMVMALWGVI---MT 272
Cdd:COG1009 215 LLLLLGAFGKSAQFPLHFWLPDA-MEGPTPVSALLhAATMVKAGVYLLAR----LSPLFALSPVWLTVVAIIGAItalFA 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 273 SSICLRQTDLKSLIAYSSVSHMGLVIAAtLAQTQWShtGSITLMIAHGLTSSMLFCLANTNYERTHsrtlllTRNMQLL- 351
Cdd:COG1009 290 ALIALAQTDIKRVLAYSTVSQLGYMFLA-LGVGAYV--AALFHLLTHAFFKALLFLGAGSVIHATG------TRDIRKMg 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 352 -----LPLMGLWWLLASLTNMALPPTINLMGELTIIVSLFNWSNVTILMTGLGTL---ITATYTLYMLTTTQWGETPSHm 423
Cdd:COG1009 361 glrkkMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTAFYSFRLFFLVFFGKPRPK- 439
|
250 260
....*....|....*....|....*.
gi 1593549716 424 ksiPPTHTRE-HLLMalhTLPMILLM 448
Cdd:COG1009 440 ---TPKHPHEsPWLM---TLPLVVLA 459
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
116-403 |
2.86e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 52.87 E-value: 2.86e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 116 IMFFIAFETTLIPTLVIITRWGNQMErlnAGTYFLFYTLTGSLPLLVALSHMQIQNGTLSThmmqlnqhtmmnSWAHSMW 195
Cdd:PRK06459 95 LLFLAGWEIMTIPSYVAIALTKKNKR---PAFVFMAFGELSTVLILAGFAWAFIISGTTNF------------SYLPSPV 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 196 WLALL-IAFMIKMPLYGLHL--WLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITM-TLDPLSKMLSYPFMVMALWGVIM 271
Cdd:PRK06459 160 PLILAsFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTIlTQTIPIGYFGLTILAIGAFSILF 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 272 TSSICLRQTDLKSLIAYSSVSHMGLVIAATLAQTQWSHTGS----------ITLMIAHGLTSSMLFCLANTnyerTHSRT 341
Cdd:PRK06459 240 GALYAYVSENVKGLLAFSTIENNGAILVALGLYMVTKQLITsiehfslitvILYSFAHSVAKTGLFLSSGL----QEKQS 315
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1593549716 342 LLLTRNMQLLLPLMGLWWLLASLTnmALPPTINLMGELTIIVSLFNWSNVTILMTGLGTLIT 403
Cdd:PRK06459 316 ITYSKKIRNRWIELGLTLLASSLS--GLLPNIGGVASWLLLESLFMFAYVLHNVISILFIVT 375
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
156-398 |
3.67e-07 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 52.52 E-value: 3.67e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 156 GSLPLLVALSHMQIQNGTLSthMMQLNQHTMMNSWAHSMWWLALlIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVL 235
Cdd:PRK08042 146 GTLLLAIACWLLWQRYGTLD--LRLLDMRMQQLPLGSDIWLLGV-IGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVV 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 236 LKLGGYGIIRITMTLDPLSKMLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLAQTQWSHTGSITL 315
Cdd:PRK08042 223 MKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGVTGIALEQPAL 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 316 M-----------IAHGLTSSMLFCLANTNYERTHSRTLLLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIIVS 384
Cdd:PRK08042 303 IalglvgglyhlLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQS 382
|
250
....*....|....
gi 1593549716 385 LFNWSNVTILMTGL 398
Cdd:PRK08042 383 FFKLSNSGAFVARL 396
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
31-323 |
9.14e-07 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 50.89 E-value: 9.14e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 31 SFGIAMLSLQWFKPTTEPMAFSNHYLgVDQISAPLLVLSCWLTPLMILASQNHLATEPSSRKRTFMITIILLQLSLILAf 110
Cdd:COG1007 42 GLLLALALLLLALGGGTGTAFGGMFV-VDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATLGMMLMA- 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 111 SSLELIMFFIAFETTLIPTLVIITRWGNQMERLNAGT-YFLFYTLTGSLpLLVALSHMQIQNGTLS-THMMQLNQHTMMN 188
Cdd:COG1007 120 SANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGALSSGF-LLYGISLLYGATGSLNlAGIAAALAAGGAN 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 189 SWahsMWWLAL---LIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLlKLGGYGI-IRITMT-LDPLSKMLSYPFMV 263
Cdd:COG1007 199 SP---LLLLGLvlvLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAAlLRLLVEaFPGLAADWQLLLAV 274
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1593549716 264 MA----LWGVIMTssicLRQTDLKSLIAYSSVSHMGLVIAATLAQTQWSHTGSITLMIAHGLTS 323
Cdd:COG1007 275 LAvlsmTVGNLAA----LAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMN 334
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
199-323 |
2.38e-06 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 49.82 E-value: 2.38e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 199 LLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLlKLGGYGII-RITMT-LDPLSKMLSYPFMVMALWGVIMTSSIC 276
Cdd:PRK05777 210 LLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAVLlRLLVVaFGGLSEDWQQVLAIIAIASMLVGNLAA 288
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1593549716 277 LRQTDLKSLIAYSSVSHMGLVIAATLAQTQWSHTGSITLMIAHGLTS 323
Cdd:PRK05777 289 LSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMT 335
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
111-300 |
1.20e-05 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 47.76 E-value: 1.20e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 111 SSLELIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLTGSLPLLVALSHMQIQNGTLSTHMMqLNQHTMMNSW 190
Cdd:MTH00020 129 TSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSV-FNMVVSAPSS 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 191 AHSMWWLALLIAFMIKMPLYGLHLWLPKAhVEAPIAGS-MILAAVLLKLGGYGIIRITmtldPLSKMLSYPFMVMALWG- 268
Cdd:MTH00020 208 DITLICLFLFIGAVGKSAQLGLHTWLPDA-MEGPTPVSaLIHAATMVTAGVFLLIRSS----PLFEQAPLALIIVTIVGs 282
|
170 180 190
....*....|....*....|....*....|....
gi 1593549716 269 --VIMTSSICLRQTDLKSLIAYSSVSHMGLVIAA 300
Cdd:MTH00020 283 ltVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVA 316
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
199-327 |
3.54e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 46.46 E-value: 3.54e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 199 LLIAFMIKMPLYGLHLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGIIRITmtlDPLSKMLSYPFMVMALWGVIMTSS--I 275
Cdd:PRK12644 209 ILVGALSKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARLA---PGFADVPVWRPTVLVLGLATMLLGgwR 284
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 1593549716 276 CLRQTDLKSLIAYSSVSHMGLVIAATLAQTQWSHTGSITLMIAHGLTSSMLF 327
Cdd:PRK12644 285 ALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALF 336
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
196-300 |
5.74e-05 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 45.40 E-value: 5.74e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 196 WLALLIAF------MIKMPLYGLHLWLPKAhVEAPIAGS-MILAAVLLKLGGYGIIRitmtLDPLSKMLSYPFMVMALWG 268
Cdd:PRK07376 224 WLALLLCIlvflgpMAKSAQFPLHVWLPDA-MEGPTPISaLIHAATMVAAGVFLVAR----MYPVFEQFPAVMTVIAWTG 298
|
90 100 110
....*....|....*....|....*....|....*
gi 1593549716 269 VI---MTSSICLRQTDLKSLIAYSSVSHMGLVIAA 300
Cdd:PRK07376 299 AItafLGASIALTQNDIKKGLAYSTISQLGYMVMA 333
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
199-402 |
1.00e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 44.84 E-value: 1.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 199 LLIAFMIKMPLYGLHLWLPKAHVEA--PIAGsmiLAAVLLKLGGYGIIRITMTLDPLSKMLSYPFMVMALWGVIMTSSIC 276
Cdd:PRK12666 216 LLVVFLIKAAMWPLNFWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLSTLLFGPEAGASAGFGQDWLLPGGLATLAF 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 277 -----LRQTDLKSLIAYSSVSHMGLVIAATLAQTQWSHTGSITLMIAHGLTSSMLFCLANTnYERTHSRTL-LLTRNMQL 350
Cdd:PRK12666 293 gaigvLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLADL-VERQRGAAAdRLAVTPEL 371
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1593549716 351 LLP-----------------LMGLWWLLASLTNMALPPTINLMGELTIIVSLFN--------WSNVTILMTGLGTLI 402
Cdd:PRK12666 372 YDLdeeeeeevgvaipatmaLLGLLFFICALALAGLPPLSGFLGKFALLQALLNppgagaawWLWALVLLSGLAALI 448
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
111-298 |
1.07e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 44.25 E-value: 1.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 111 SSLELIMFFIAFETTLIPTLVIITRWGNQMERLNAG-TYFLFYTLTGSLPLL-VALSHMQIQNGTLSTHMMQLNQHTMMN 188
Cdd:MTH00196 11 SSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGlKYFVLGALSSGLFLFgCALLCGTTGGLHLSYINLVLNSGQSFS 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 189 SWAHSMWWLALLIAFMIKMPLYGLHLWLPKAHVEAPiagsMILAAVLLKLGGYGIIRITMTLDPLSKMLsypfMVMALWG 268
Cdd:MTH00196 91 SVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAP----TKTTALLAIVPKLGIFSILVSIGLNVNIL----LIGGLFS 162
|
170 180 190
....*....|....*....|....*....|
gi 1593549716 269 VIMTSSICLRQTDLKSLIAYSSVSHMGLVI 298
Cdd:MTH00196 163 LFVGAIGALNQTKIKRLLAYSGIGHMGFVL 192
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
115-299 |
1.37e-04 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 44.53 E-value: 1.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 115 LIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLTGSLPLLVALSHMQIQNGTLSTHMMQLNQHTMMNswaHSM 194
Cdd:PRK12645 132 LIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIREMIANADEIQN---SPL 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 195 WWLAL---LIAFMIKMPLYGLHLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGIIRITmtldPLSKMLSYPFMVMALWGVI 270
Cdd:PRK12645 209 FIPAMiliLLGAFTKSAQFPFYIWLPDA-MEAPTPVSAYLhSATMVKAGIYLVARFT----PIFAGSQVWFWTVTLVGLI 283
|
170 180 190
....*....|....*....|....*....|..
gi 1593549716 271 M---TSSICLRQTDLKSLIAYSSVSHMGLVIA 299
Cdd:PRK12645 284 TlfwGSLNAVKQTDLKGILAFSTVSQLGLIMS 315
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
199-402 |
1.61e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 43.72 E-value: 1.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 199 LLIAFMIKMPLYGLHLWLPkahveaPIAGSMILAAVLLKLGGYGIIRITMtldpLSKMLSYPFMVMALWGVIMTSSIC-- 276
Cdd:MTH00144 90 LLLGLCLKLGLFPFHFWVP------SVMAGLSWLSCFLLLTWQKVAPLFL----LSNFLDLYWLAYLLCVISVLSALVgs 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 277 ---LRQTDLKSLIAYSSVSHMGLVIAATLAQtqwSHTGSITLMIAHGLTSSMLFCLANTNYerthsrTLLLTRNMQLLLP 353
Cdd:MTH00144 160 iggLNQTQVRALLAYSSISHTGWMLVAILHG---SWLMWMYFLIYIVSSGFLFFSLWSGDS------GSMKDLGSLKPSY 230
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1593549716 354 LMGLWWLLASLTNMALPPTINLMGELTIIVSLFNWSNV-TILMTGLGTLI 402
Cdd:MTH00144 231 KTGLSIISLLLSLGGLPPFLGFCSKLLVLISSMESSPLlLILLLLLGSLI 280
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
199-330 |
2.07e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 43.79 E-value: 2.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 199 LLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITmtldPLSKMLSYPFMVMALWGVI---MTSSI 275
Cdd:MTH00032 231 LLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSF----PLFEKAPLTLLIITIFGALtafFAATV 306
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 1593549716 276 CLRQTDLKSLIAYSSVSHMGLVIaaTLAQTQWSHTGSITLMIAHGLTSSMLFCLA 330
Cdd:MTH00032 307 GLVQNDLKKVIAYSTCSQLGYMV--LIIGIEGSHNVGLFHLVNHAFFKALLFLSA 359
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
116-294 |
3.12e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 43.28 E-value: 3.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 116 IMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLTGSLPLLVALSHMQIQNGTLSTHMMqLNQHTMMNSWAHSMW 195
Cdd:PRK12649 134 IQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATI-LQDSELIENIKGHPL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 196 WLALLIAFMI----KMPLYGLHLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGIIRItmtlDPLSKMLSYPFMVMALWGVI 270
Cdd:PRK12649 213 FLITLILIFIgaaaKSAQGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARI----HPIFSGTEAWFILVSGTGMI 287
|
170 180
....*....|....*....|....*..
gi 1593549716 271 ---MTSSICLRQTDLKSLIAYSSVSHM 294
Cdd:PRK12649 288 tmvLAGFLAFRQTDIKAILAYSTISQL 314
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
197-396 |
1.45e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 40.53 E-value: 1.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 197 LALLIAFMIKMPLYGLHLWLPkaHVEAPIagSMILAAVLLKLGGYGIIRITMTLDPLSKMLSYPFMVMAlwGVIMTSSIC 276
Cdd:MTH00011 92 LMLLVSLMLKLGMAPCHFWFP--SVMSSI--SWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAM--SALAGGLGG 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 277 LRQTDLKSLIAYSSVSHMGLViaaTLAQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRTLLLTRNmqlllPLMG 356
Cdd:MTH00011 166 MNQTQLRPLLAYSSIGHMGWM---TMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMS-----QTTS 237
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1593549716 357 LWWLLASLTNMALPPTINLMGELTIIVSLFNWSNVTILMT 396
Cdd:MTH00011 238 MSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLV 277
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
197-327 |
2.10e-03 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 40.66 E-value: 2.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 197 LALLIAFMIKMPLYGLHLWLPKAhVEAPIAGSMILAAVLLKLGGYGIIRItMTLDPLSKMLSYPFMVMALWGVIMTSSIC 276
Cdd:PRK07390 225 LALIAGPTGKCAQFPLHLWLDEA-MEGPNPASILRNSVVVATGAWVLIKL-QPVLALSPVALTVLIVIGTVTAIGASLVA 302
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 1593549716 277 LRQTDLKSLIAYSSVSHMGLV-IAATLAQTQWshtgSITLMIAHGLTSSMLF 327
Cdd:PRK07390 303 IAQIDIKRALSYSTSAYLGLVfIAVGLQQPDI----ALLLLLTHAIAKALLF 350
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
188-300 |
3.65e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 39.57 E-value: 3.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 188 NSWAHSMWWLALLIAFMIKMPLYGLHLWLPKAhVEAPIAGS-------MILAAVLLklggygIIRITMTLDPLSKMLSYP 260
Cdd:MTH00208 231 NSFLINILLFGILLAAAGKSAQFGLHPWLPAA-MEGPTPVSallhsstMVVAGVFL------LIRTSPLISNSPWFLSLC 303
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1593549716 261 FMVMALwGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAA 300
Cdd:MTH00208 304 LILGSL-TALFAASTAISQHDIKKIIAYSTTSQLGLMVVA 342
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
262-371 |
3.78e-03 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 39.63 E-value: 3.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 262 MVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLAQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRT 341
Cdd:PRK06277 270 IALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSN 349
|
90 100 110
....*....|....*....|....*....|
gi 1593549716 342 LLLTRNMQLLLPLMGLWWLLASLTNMALPP 371
Cdd:PRK06277 350 LRKLGGLLPVMPVVAFMVLCAKLAISGVPP 379
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
150-323 |
4.64e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 39.46 E-value: 4.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 150 LFYTLTGSLPLLVAlshmqIQNGTLSTHMMQLNQHtmmnswahSMWWLALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSM 229
Cdd:MTH00198 269 LYFGFTGNEGMLGT-----ILSATLETTNIELRQG--------SLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTA 335
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1593549716 230 ILAAVllklGGYGIIRITMTLDPLSKMLsypfMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLAQTQWSH 309
Cdd:MTH00198 336 LIAII----PKFTVYILLTSLVITSKLL----LSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESL 407
|
170
....*....|....
gi 1593549716 310 TGSITLMIAHGLTS 323
Cdd:MTH00198 408 QASWTYAVTYLVSA 421
|
|
| |
