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Conserved domains on  [gi|1824665695|ref|YP_009740556|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Paratonkinacris vittifemoralis]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009596)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
3-115 7.71e-42

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 133.75  E-value: 7.71e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665695   3 ILSTSVFISFIVPMIVMILATMLSKKLINDREKSSPFECGFDPKSSARMPFSLQFFLIAVIFLIFDVEIALILPIVIILK 82
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80
                          90       100       110
                  ....*....|....*....|....*....|...
gi 1824665695  83 TSNIMIWTMSTMFFILILLMGLYHEWNQGALQW 115
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
3-115 7.71e-42

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 133.75  E-value: 7.71e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665695   3 ILSTSVFISFIVPMIVMILATMLSKKLINDREKSSPFECGFDPKSSARMPFSLQFFLIAVIFLIFDVEIALILPIVIILK 82
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80
                          90       100       110
                  ....*....|....*....|....*....|...
gi 1824665695  83 TSNIMIWTMSTMFFILILLMGLYHEWNQGALQW 115
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 2.05e-26

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 94.03  E-value: 2.05e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665695  19 MILATMLSKKlINDREKSSPFECGFDPKSSARMPFSLQFFLIAVIFLIFDVEIALILPIVIILKtSNIMIWTMSTMFFIL 98
Cdd:pfam00507   1 LLLSRLLGPK-RPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR-ELGWFGFVEMLIFIA 78
                          90
                  ....*....|....*.
gi 1824665695  99 ILLMGLYHEWNQGALQ 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
8-115 2.98e-23

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 86.71  E-value: 2.98e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665695   8 VFISFIVPMIVMILATMLSKKlINDREKSSPFECGFDPKSSARMPFSLQFFLIAVIFLIFDVEIALILPIVIILKTSNIM 87
Cdd:COG0838    12 LLVALGLALAMLLLSRLLGPK-RPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWF 90
                          90       100
                  ....*....|....*....|....*....
gi 1824665695  88 -IWTMstMFFILILLMGLYHEWNQGALQW 115
Cdd:COG0838    91 gLIEM--LVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
3-115 7.71e-42

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 133.75  E-value: 7.71e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665695   3 ILSTSVFISFIVPMIVMILATMLSKKLINDREKSSPFECGFDPKSSARMPFSLQFFLIAVIFLIFDVEIALILPIVIILK 82
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80
                          90       100       110
                  ....*....|....*....|....*....|...
gi 1824665695  83 TSNIMIWTMSTMFFILILLMGLYHEWNQGALQW 115
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
1-116 1.51e-40

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 130.36  E-value: 1.51e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665695   1 MLILSTSVFISFIVPMIVMILATMLSKKLINDREKSSPFECGFDPKSSARMPFSLQFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80
                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1824665695  81 LKTSNIMIWTMSTMFFILILLMGLYHEWNQGALQWA 116
Cdd:MTH00148   81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWV 116
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
1-116 2.51e-37

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 122.41  E-value: 2.51e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665695   1 MLILSTSVFISFIVPMIVMILATMLSKKLINDREKSSPFECGFDPKSSARMPFSLQFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00202    1 MLLILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80
                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1824665695  81 LKTSNIMIWTMSTMFFILILLMGLYHEWNQGALQWA 116
Cdd:MTH00202   81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWV 116
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
1-116 3.86e-33

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 111.87  E-value: 3.86e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665695   1 MLILSTSVFISFIVPMIVMILATMLSKKLINDREKSSPFECGFDPKSSARMPFSLQFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00012    1 MSLMMIPMMISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80
                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1824665695  81 LKTSNIMIWTMSTMFFILILLMGLYHEWNQGALQWA 116
Cdd:MTH00012   81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
1-116 3.49e-28

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 99.24  E-value: 3.49e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665695   1 MLILSTSVFISFIVPMIVMILATMLSKKlindrEKSSPFECGFDPKSSARMPFSLQFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00106    4 MLTLLTNTLLASLLVLIAFWLPQLNIYS-----EKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWA 78
                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1824665695  81 LKTSNIMIWTMSTMFFILILLMGLYHEWNQGALQWA 116
Cdd:MTH00106   79 SQTNNLNTMLTMALLLISLLALSLAYEWTQKGLEWT 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
4-116 1.26e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 94.95  E-value: 1.26e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665695   4 LSTSVFISFIVPMIVMILATMLSKKLiNDREKSSPFECGFDPKSSARMPFSLQFFLIAVIFLIFDVEIALILPIVIILKT 83
Cdd:MTH00113    3 LISMLTISLALSTILTTLNFWLTQTK-PDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAINL 81
                          90       100       110
                  ....*....|....*....|....*....|...
gi 1824665695  84 SNIMIWTMSTMFFILILLMGLYHEWNQGALQWA 116
Cdd:MTH00113   82 TTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 2.05e-26

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 94.03  E-value: 2.05e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665695  19 MILATMLSKKlINDREKSSPFECGFDPKSSARMPFSLQFFLIAVIFLIFDVEIALILPIVIILKtSNIMIWTMSTMFFIL 98
Cdd:pfam00507   1 LLLSRLLGPK-RPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR-ELGWFGFVEMLIFIA 78
                          90
                  ....*....|....*.
gi 1824665695  99 ILLMGLYHEWNQGALQ 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
1-116 2.42e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 94.60  E-value: 2.42e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665695   1 MLILSTSVFISFIVPMIVMILATMLSKkLINDREKSSPFECGFDPKSSARMPFSLQFFLIAVIFLIFDVEIALILPivii 80
Cdd:MTH00136    1 MNLITTILTITIALSLILAIVSFWLPQ-MTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLP---- 75
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 1824665695  81 LKTSNIMIWTMSTMFF---ILILL-MGLYHEWNQGALQWA 116
Cdd:MTH00136   76 LPWGDQLPSPLLTFFWataVLILLtLGLIYEWLQGGLEWA 115
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
1-115 9.08e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 92.65  E-value: 9.08e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665695   1 MLILSTSVFISFIVPMIVMILAtMLSKKLINDREKSSPFECGFDPKSSARMPFSLQFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00203    1 MNLIMLFFLIALLLSLILLFIA-FWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWS 79
                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1824665695  81 LKTSNimIWTMSTMFFILILLMGLYHEWNQGALQW 115
Cdd:MTH00203   80 NQLSS--LSLLLAFLFLILLTLGLIYEWLQGGLEW 112
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
1-117 1.61e-25

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 92.35  E-value: 1.61e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665695   1 MLILSTSVFISFIVPMIVMILATMLSKKLInDREKSSPFECGFDPKSSARMPFSLQFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00042    1 MTNLIFFLLIILILTSLLLLAGHFLPSRSP-DLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPA 79
                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1824665695  81 LKTSNIMIWTMSTMFFILILLMGLYHEWNQGALQWAN 117
Cdd:MTH00042   80 TLITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
16-116 6.59e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 90.82  E-value: 6.59e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665695  16 MIVMILATMLSKKLIN----------DREKSSPFECGFDPKSSARMPFSLQFFLIAVIFLIFDVEIALILPI---VIILK 82
Cdd:MTH00069    3 MLMLLISTILSLILITisfwlplnnpDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTpwaSQLNT 82
                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1824665695  83 TSNIMIWTMstmfFILILL-MGLYHEWNQGALQWA 116
Cdd:MTH00069   83 PTNTLFWST----LILILLtLGLIYEWIQGGLEWA 113
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
8-115 2.98e-23

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 86.71  E-value: 2.98e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665695   8 VFISFIVPMIVMILATMLSKKlINDREKSSPFECGFDPKSSARMPFSLQFFLIAVIFLIFDVEIALILPIVIILKTSNIM 87
Cdd:COG0838    12 LLVALGLALAMLLLSRLLGPK-RPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWF 90
                          90       100
                  ....*....|....*....|....*....
gi 1824665695  88 -IWTMstMFFILILLMGLYHEWNQGALQW 115
Cdd:COG0838    91 gLIEM--LVFIAILLVGLIYAWKKGALEW 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
10-116 8.53e-21

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 80.29  E-value: 8.53e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665695  10 ISFIVPMIVMILATMLSKKLiNDREKSSPFECGFDPKSSARMPFSLQFFLIAVIFLIFDVEIALILPIVIILKTSNiMIW 89
Cdd:PRK06602   17 VAIGLGILLLVAGKLLGPRA-PDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSFREIG-WLG 94
                          90       100
                  ....*....|....*....|....*..
gi 1824665695  90 TMSTMFFILILLMGLYHEWNQGALQWA 116
Cdd:PRK06602   95 FVEAMIFILVLLVGLVYLWRKGALDWE 121
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
9-115 6.06e-18

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 72.79  E-value: 6.06e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665695   9 FISFIVPMIVMILATMLSKKlINDREKSSPFECGFDPKSSARMPFSLQFFLIAVIFLIFDVEIALILP-IVIILKTSNIM 87
Cdd:MTH00018    8 IFSVVLSALFSGASYFLGVK-QPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPwCVLYNQIAPFG 86
                          90       100
                  ....*....|....*....|....*...
gi 1824665695  88 IWTMstMFFILILLMGLYHEWNQGALQW 115
Cdd:MTH00018   87 FWTM--VGFLFILTLGLIYEWIKGGLEW 112
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
32-115 1.90e-17

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 71.66  E-value: 1.90e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665695  32 DREKSSPFECGFDPKSSARMPFSLQFFLIAVIFLIFDVEIALILPIVIILKTSNIM-IWTMstMFFILILLMGLYHEWNQ 110
Cdd:MTH00055   35 DSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGLFgFWVM--YLFLIILTIGLIYEWVK 112

                  ....*
gi 1824665695 111 GALQW 115
Cdd:MTH00055  113 GGLEW 117
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
7-115 7.51e-15

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 65.34  E-value: 7.51e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665695   7 SVFISFIVPMIVMILATMLSKKLINDR--------EKSSPFECGFDPKSSARMPFSLQFFLIAVIFLIFDVEIALILPIV 78
Cdd:MTH00030    7 TIFFSTLLGVGIILLLVSISFTLGNSRigltkpdsEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWS 86
                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1824665695  79 IILKTSNIM-IWTMSTmfFILILLMGLYHEWNQGALQW 115
Cdd:MTH00030   87 IVFNQLNLFsFWIVYT--FLIVLAIGLAYEWIKGGLEW 122
ndhC CHL00022
NADH dehydrogenase subunit 3
1-115 1.84e-10

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 53.84  E-value: 1.84e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665695   1 MLILS--TSVFISFIVPMIVMILATMLSKKLINDR---EKSSPFECGFDPKSSARMPFSLQFFLIAVIFLIFDVEIALIL 75
Cdd:CHL00022    1 MFLLYeyDIFWAFLIISSLIPILAFLISGLLAPISkgpEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLY 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 1824665695  76 PIVIILKTSNIMIWtMSTMFFILILLMGLYHEWNQGALQW 115
Cdd:CHL00022   81 PWAMSFDVLGVSAF-IEALIFVLILIVGLVYAWRKGALEW 119
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
1-115 1.14e-09

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 51.98  E-value: 1.14e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665695   1 MLILSTSVFIsfivpmIVMILATMLSKKLIN---DREKSSPFECGFDPKSSARMpFSLQFFLIAVIFLIFDVEIALILPI 77
Cdd:PRK08489   16 LLVLTFVAFF------LTTRLARFISRKLAQkntEKLKLAIYECGPEPVKQPNR-ISSHFYIMALLFILFDVEIVFMFPW 88
                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1824665695  78 VIILKTsnIMIWTMSTMF-FILILLMGLYHEWNQGALQW 115
Cdd:PRK08489   89 AVDFKL--LGLFGLIEMLlFIVLLTIGFIYAWKKGALEW 125
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
2-115 5.04e-08

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 47.43  E-value: 5.04e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665695   2 LILSTSVFISFIVPMIVMILATMLSKKLINDrEKSSPFECGFDPKSSARMPFSLQFFLIAVIFLIFDVEIALILPIVIIL 81
Cdd:PRK07756   10 MIVLIFLLLGILLPVVALTLGRMLRPNKPSA-AKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAY 88
                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1824665695  82 KtsNIMIWTMSTMF-FILILLMGLYHEWNQGALQW 115
Cdd:PRK07756   89 D--KLGLFALIEMLiFVVMLLVGLAYAWKKKVLQW 121
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
1-115 5.95e-06

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 41.80  E-value: 5.95e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665695   1 MLILSTSVFISFIVPMIVMILATMLSKKLiNDREKSSPFECGFDPKSSARMPFSLQFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00092    1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKK-FDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVS 79
                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1824665695  81 LKTSNIMIWTMstMFFIlilLMGLYHEWNQGALQW 115
Cdd:MTH00092   80 DFSSLISFFML--MIFI---FFGFYMEWWYGKLIW 109
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
19-115 8.50e-06

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 41.58  E-value: 8.50e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665695  19 MILATMLSKKLINdREKSSPFECGFDPKSSARMP--FSLQFFLIAVIFLIFDVEIALILPIVIILKTsnIMIWTMSTM-F 95
Cdd:PRK07928   22 VVVASLVGPKRYN-RAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYPWAVSFDA--LGVFGLVEMaL 98
                          90       100
                  ....*....|....*....|
gi 1824665695  96 FILILLMGLYHEWNQGALQW 115
Cdd:PRK07928   99 FMLTVFVAYAYVWRRGGLEW 118
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
1-117 1.35e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 38.34  E-value: 1.35e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665695   1 MLILSTSVFISFIVPMIVMILATML--SKKLINDREKSSPFECGFDPKSSARMPFSLQFFLIAVIFLIFDVEIALILPIV 78
Cdd:MTH00060    1 MLVLLFVFFVFFLLFLVIYFFHSGLwnNKIYSGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 1824665695  79 I-ILKTSNIMIWtmstMFFILILLMGLYHEWNQGALQWAN 117
Cdd:MTH00060   81 FqGLLFYNFWYY----YFFLLLLFLGFVVELFSGYVRWVY 116
PRK06432 PRK06432
NADH dehydrogenase subunit A; Validated
32-115 9.62e-04

NADH dehydrogenase subunit A; Validated


Pssm-ID: 102372  Cd Length: 144  Bit Score: 36.33  E-value: 9.62e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665695  32 DREKSSPFECGFDPKSSARMPFSLQFFLIAVIFLIFDVEIALILPIVIILKTSNIMIWtMSTMFFILILLMGLYHEWNQG 111
Cdd:PRK06432   60 DQSYLEPYESGEVAREIWGGPSINQYYIVVLLFVVFDVDMLLLFPWAFDFKRLGLIPF-IETLIFLAMPLFAVYYAFKMG 138

                  ....
gi 1824665695 112 ALQW 115
Cdd:PRK06432  139 YMRW 142
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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