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Conserved domains on  [gi|1824669212|ref|YP_009740647|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Heteropternis respondens]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009588)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-117 4.30e-41

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 131.90  E-value: 4.30e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669212   1 MMTLMTSMLISFILPMTVMTIATMLSKKSINDREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1824669212  81 MKTSNIMMWTMATMFFIMILLLGLYYEWNQGALKWAS 117
Cdd:MTH00148   81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
 
Name Accession Description Interval E-value
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-117 4.30e-41

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 131.90  E-value: 4.30e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669212   1 MMTLMTSMLISFILPMTVMTIATMLSKKSINDREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1824669212  81 MKTSNIMMWTMATMFFIMILLLGLYYEWNQGALKWAS 117
Cdd:MTH00148   81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 1.24e-29

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 102.12  E-value: 1.24e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669212  19 MTIATMLSKKSINdREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVIIMKTSNIMMWTMAtMFFIM 98
Cdd:pfam00507   1 LLLSRLLGPKRPN-PEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFRELGWFGFVEM-LIFIA 78

                          90
                  ....*....|....*.
gi 1824669212  99 ILLLGLYYEWNQGALK 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 8-115 2.71e-26

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 94.42  E-value: 2.71e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669212   8 MLISFILPMTVMTIATMLSKKSiNDREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVIIMKTSNIM 87
Cdd:COG0838    12 LLVALGLALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWF 90

                          90       100
                  ....*....|....*....|....*...
gi 1824669212  88 MWtMATMFFIMILLLGLYYEWNQGALKW 115
Cdd:COG0838    91 GL-IEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-117 4.30e-41

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 131.90  E-value: 4.30e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669212   1 MMTLMTSMLISFILPMTVMTIATMLSKKSINDREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1824669212  81 MKTSNIMMWTMATMFFIMILLLGLYYEWNQGALKWAS 117
Cdd:MTH00148   81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 3.72e-40

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 129.51  E-value: 3.72e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669212   3 TLMTSMLISFILPMTVMTIATMLSKKSINDREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVIIMK 82
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1824669212  83 TSNIMMWTMATMFFIMILLLGLYYEWNQGALKW 115
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-116 2.33e-38

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 125.10  E-value: 2.33e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669212   1 MMTLMTSMLISFILPMTVMTIATMLSKKSINDREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00202    1 MLLILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1824669212  81 MKTSNIMMWTMATMFFIMILLLGLYYEWNQGALKWA 116
Cdd:MTH00202   81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWV 116
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-117 5.13e-33

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 111.49  E-value: 5.13e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669212   1 MMTLMTSMLISFILPMTVMTIATMLSKKSINDREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00012    1 MSLMMIPMMISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1824669212  81 MKTSNIMMWTMATMFFIMILLLGLYYEWNQGALKWAS 117
Cdd:MTH00012   81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWSS 117
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 2-116 8.14e-32

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 108.10  E-value: 8.14e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669212   2 MTLMTSMLISFILPMTVMTIATMLSKKSINdREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVIIM 81
Cdd:MTH00106    1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIY-SEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1824669212  82 KTSNIMMWTMATMFFIMILLLGLYYEWNQGALKWA 116
Cdd:MTH00106   80 QTNNLNTMLTMALLLISLLALSLAYEWTQKGLEWT 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 2-116 8.26e-31

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 105.73  E-value: 8.26e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669212   2 MTLMTSMLISFILPMTVMTIATMLSKKSiNDREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVIIM 81
Cdd:MTH00113    1 MNLISMLTISLALSTILTTLNFWLTQTK-PDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAI 79

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1824669212  82 KTSNIMMWTMATMFFIMILLLGLYYEWNQGALKWA 116
Cdd:MTH00113   80 NLTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 6.63e-30

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 103.46  E-value: 6.63e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669212   1 MMTLMTSMLISFILPMTVMTIATMLSKKSiNDREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00136    1 MNLITTILTITIALSLILAIVSFWLPQMT-PDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWG 79

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1824669212  81 MKTSNIMMWTMATMFFIMILLLGLYYEWNQGALKWA 116
Cdd:MTH00136   80 DQLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWA 115
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 1.24e-29

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 102.12  E-value: 1.24e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669212  19 MTIATMLSKKSINdREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVIIMKTSNIMMWTMAtMFFIM 98
Cdd:pfam00507   1 LLLSRLLGPKRPN-PEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFRELGWFGFVEM-LIFIA 78

                          90
                  ....*....|....*.
gi 1824669212  99 ILLLGLYYEWNQGALK 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-116 1.26e-28

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 100.06  E-value: 1.26e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669212   1 MMTLMTSMLISFILPMTVMTIATMLSKKSInDREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00042    1 MTNLIFFLLIILILTSLLLLAGHFLPSRSP-DLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPA 79

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1824669212  81 MKTSNIMMWTMATMFFIMILLLGLYYEWNQGALKWA 116
Cdd:MTH00042   80 TLITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWA 115
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 2-115 1.83e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 97.28  E-value: 1.83e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669212   2 MTLMTSMLISFILPMTVMTIATMLSKKSINDREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVIIM 81
Cdd:MTH00203    1 MNLIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSN 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1824669212  82 KTSNimMWTMATMFFIMILLLGLYYEWNQGALKW 115
Cdd:MTH00203   81 QLSS--LSLLLAFLFLILLTLGLIYEWLQGGLEW 112
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 4-116 1.11e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 95.06  E-value: 1.11e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669212   4 LMTSMLISFILPMTVMTIATMLSKKSiNDREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVIIMKT 83
Cdd:MTH00069    2 IMLMLLISTILSLILITISFWLPLNN-PDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQL 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1824669212  84 SNIMMWTMATMFFIMILLLGLYYEWNQGALKWA 116
Cdd:MTH00069   81 NTPTNTLFWSTLILILLTLGLIYEWIQGGLEWA 113
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 8-115 2.71e-26

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 94.42  E-value: 2.71e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669212   8 MLISFILPMTVMTIATMLSKKSiNDREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVIIMKTSNIM 87
Cdd:COG0838    12 LLVALGLALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWF 90

                          90       100
                  ....*....|....*....|....*...
gi 1824669212  88 MWtMATMFFIMILLLGLYYEWNQGALKW 115
Cdd:COG0838    91 GL-IEMLVFIAILLVGLIYAWKKGALEW 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 8-116 6.58e-25

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 91.08  E-value: 6.58e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669212   8 MLISFILPMTVMTIATMLSKKSiNDREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILP-IVIIMKTSNI 86
Cdd:PRK06602   15 LIVAIGLGILLLVAGKLLGPRA-PDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPwAVSFREIGWL 93

                          90       100       110
                  ....*....|....*....|....*....|
gi 1824669212  87 MMWTMatMFFIMILLLGLYYEWNQGALKWA 116
Cdd:PRK06602   94 GFVEA--MIFILVLLVGLVYLWRKGALDWE 121
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 2-115 1.44e-21

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 82.03  E-value: 1.44e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669212   2 MTLMTSMLISFILPMTVMTIATMLSKKSiNDREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILP-IVII 80
Cdd:MTH00018    1 YGLFILLIFSVVLSALFSGASYFLGVKQ-PDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPwCVLY 79

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1824669212  81 MKTSNIMMWTMatMFFIMILLLGLYYEWNQGALKW 115
Cdd:MTH00018   80 NQIAPFGFWTM--VGFLFILTLGLIYEWIKGGLEW 112
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 8-115 5.77e-20

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 78.21  E-value: 5.77e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669212   8 MLISFILPmTVMTIATMLSKKSINDREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILP-IVIIMKTSNI 86
Cdd:MTH00055   12 LLFSIGLS-TVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPwCVVYNQIGLF 90

                          90       100
                  ....*....|....*....|....*....
gi 1824669212  87 MMWTMatMFFIMILLLGLYYEWNQGALKW 115
Cdd:MTH00055   91 GFWVM--YLFLIILTIGLIYEWVKGGLEW 117
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 3-115 1.06e-16

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 69.96  E-value: 1.06e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669212   3 TLMTSMLISFILPMTVMTIATMLSKKSIN----DREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIV 78
Cdd:MTH00030    7 TIFFSTLLGVGIILLLVSISFTLGNSRIGltkpDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWS 86

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1824669212  79 IIMKTSNIM-MWTMATmfFIMILLLGLYYEWNQGALKW 115
Cdd:MTH00030   87 IVFNQLNLFsFWIVYT--FLIVLAIGLAYEWIKGGLEW 122
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
8-115 6.11e-11

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 55.13  E-value: 6.11e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669212   8 MLISFILPMTVMTIATMLSKKSINDrEKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVIIMKtsNIM 87
Cdd:PRK07756   16 LLLGILLPVVALTLGRMLRPNKPSA-AKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYD--KLG 92

                          90       100
                  ....*....|....*....|....*....
gi 1824669212  88 MWTMATMF-FIMILLLGLYYEWNQGALKW 115
Cdd:PRK07756   93 LFALIEMLiFVVMLLVGLAYAWKKKVLQW 121
ndhC CHL00022
NADH dehydrogenase subunit 3
 8-115 7.42e-11

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 54.99  E-value: 7.42e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669212   8 MLISFILPMTVMTIATMLSKKSINDrEKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVIIMKTSNIM 87
Cdd:CHL00022   14 LIISSLIPILAFLISGLLAPISKGP-EKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVS 92

                          90       100
                  ....*....|....*....|....*...
gi 1824669212  88 MWTMAtMFFIMILLLGLYYEWNQGALKW 115
Cdd:CHL00022   93 AFIEA-LIFVLILIVGLVYAWRKGALEW 119
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
8-117 1.13e-10

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 54.67  E-value: 1.13e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669212   8 MLISFILPMTVMTIATMLSKKSIN---DREKSSPFECGFDP-KSSARMpfSIQFFLIAVIFLIFDVEIALILPIVIIMKT 83
Cdd:PRK08489   17 LVLTFVAFFLTTRLARFISRKLAQkntEKLKLAIYECGPEPvKQPNRI--SSHFYIMALLFILFDVEIVFMFPWAVDFKL 94

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1824669212  84 snIMMWTMATMF-FIMILLLGLYYEWNQGALKWAS 117
Cdd:PRK08489   95 --LGLFGLIEMLlFIVLLTIGFIYAWKKGALEWQS 127
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 19-115 1.65e-07

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 46.20  E-value: 1.65e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669212  19 MTIATMLSKKSINdREKSSPFECGFDPKSSARMP--FSIQFFLIAVIFLIFDVEIALILPIVIIMKTSNIMMwTMATMFF 96
Cdd:PRK07928   22 VVVASLVGPKRYN-RAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYPWAVSFDALGVFG-LVEMALF 99

                          90
                  ....*....|....*....
gi 1824669212  97 IMILLLGLYYEWNQGALKW 115
Cdd:PRK07928  100 MLTVFVAYAYVWRRGGLEW 118
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 26-115 3.34e-06

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 42.58  E-value: 3.34e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669212  26 SKKSINDREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPiviiMKTSNIMMWTMAT-MFFIMILLLGL 104
Cdd:MTH00060   28 NKIYSGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLN----MPFQGLLFYNFWYyYFFLLLLFLGF 103

                          90
                  ....*....|.
gi 1824669212 105 YYEWNQGALKW 115
Cdd:MTH00060  104 VVELFSGYVRW 114
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-115 8.87e-06

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 41.42  E-value: 8.87e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669212   1 MMTLMTSMLISFILPMTVMTIATMLSKKSiNDREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00092    1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKK-FDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVS 79

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1824669212  81 MKTSNIMMWTMatMFFImilLLGLYYEWNQGALKW 115
Cdd:MTH00092   80 DFSSLISFFML--MIFI---FFGFYMEWWYGKLIW 109
PRK06432 PRK06432
NADH dehydrogenase subunit A; Validated
 32-115 3.74e-05

NADH dehydrogenase subunit A; Validated


Pssm-ID: 102372  Cd Length: 144  Bit Score: 40.18  E-value: 3.74e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669212  32 DREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVIIMKTSNIMMWtMATMFFIMILLLGLYYEWNQG 111
Cdd:PRK06432   60 DQSYLEPYESGEVAREIWGGPSINQYYIVVLLFVVFDVDMLLLFPWAFDFKRLGLIPF-IETLIFLAMPLFAVYYAFKMG 138


                  ....
gi 1824669212 112 ALKW 115
Cdd:PRK06432  139 YMRW 142
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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