|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
2-572 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 585.18 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 2 MSNFYISSFIFFMSGSLLFLMSLIFLYYDISFLVEWEICSFNSSVILMAVILDWMSLIFMSFVLVISSMVLYYSSDYMNG 81
Cdd:MTH00165 1 MSMCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 82 DVNSDRFVILVTLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLVIYYQNVKSVNAGLLTALSNRIGDVFILLSISWMLN 161
Cdd:MTH00165 81 DKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 162 FGSWNYIYYYDYFFNSYDYSIICFMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFS 241
Cdd:MTH00165 161 FGSWNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 242 KMNSVLLLIGCLTMFMSGVAANCEFDLKKIIALSTLSQLGLMMGILGAGYPLMSFFHLLTHALFKSLLFLCAGCYIHGLF 321
Cdd:MTH00165 241 FFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 322 DNQDIRYMGSLTMSMPYTSACLNVANLSLCGFPFLSGFYSKDLILELYSFGFLNMIIFFLFFFSTGLTVMYSFRLLYYSL 401
Cdd:MTH00165 321 NSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSM 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 402 IKFFSFNSLSNFI-IGRDMYFGMFILLLFTIFGGSLLSWLIFPIPACVYLPFGLSMLTVMVILGGLYFGYLLYLLDFSSV 480
Cdd:MTH00165 401 SGDFNLKSLNNLSdESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYN 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 481 NLCNSSFSINFFS-SMWFMPLISTNFTSCVGLTVGGLYSSFMDYGWLEYYGAQGVYNFFIYFIKQYLSLFDYNFKTYLMM 559
Cdd:MTH00165 481 LKSLKNYKLSSFLgSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLS 560
|
570
....*....|...
gi 1824669241 560 FSLFFVFMFLYII 572
Cdd:MTH00165 561 FLLWMIILLLLFL 573
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
7-573 |
8.90e-166 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 483.19 E-value: 8.90e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 7 ISSFIFFMSGSLLFLMSLIFLYYDISFLVEWEICSFNSSVILMAVILDWMSLIFMSFVLVISSMVLYYSSDYMNGDVNSD 86
Cdd:MTH00151 6 LSSFLLFSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLK 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 87 RFVILVTLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLVIYYQNVKSVNAGLLTALSNRIGDVFILLSISWMLNFGSWN 166
Cdd:MTH00151 86 RFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLLGHWS 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 167 YIYYYDYFFnsydYSIICFMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-FFSKMNS 245
Cdd:MTH00151 166 ILSMWDFKL----SGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLsSSSGFSS 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 246 VLLLIGCLTMFMSGVAANCEFDLKKIIALSTLSQLGLMMGILGAGYPLMSFFHLLTHALFKSLLFLCAGCYIHGLFDNQD 325
Cdd:MTH00151 242 FLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQD 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 326 IRYMGSLTMSMPYTSACLNVANLSLCGFPFLSGFYSKDLILELYSFGFLNMIIFFLFFFSTGLTVMYSFRLLYYSLIKFF 405
Cdd:MTH00151 322 IRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSM 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 406 SFNSLSNFI-IGRDMYFGMFILLLFTIFGGSLLSWLIFPIPACVYLPFGLSMLTVMVILGGLYFGYLLYLLDFSSVNlcn 484
Cdd:MTH00151 402 KSSSLSSKSdEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSFGFWDSGFSSSK--- 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 485 SSFSINFFSSMWFMPLISTNFTSCVGLTVGGLYSSFMDYGWLEYYGAQGVYNFFiyfikqyLSLFDYNFKTYLMMFSLFF 564
Cdd:MTH00151 479 MVKLSFFFSSMWFLSPLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKAN-------KSFSVLNESWPVKWFNFFI 551
|
....*....
gi 1824669241 565 VFMFLYIIL 573
Cdd:MTH00151 552 GLILLLVLF 560
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
10-570 |
6.17e-153 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 450.64 E-value: 6.17e-153
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 10 FIFFMSGSLLFLMSLIFLYYDISFLVEWEICSFNSSVILMAVILDWMSLIFMSFVLVISSMVLYYSSDYMNGDVNSDRFV 89
Cdd:MTH00209 7 FSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFI 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 90 ILVTLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLVIYYQNVKSVNAGLLTALSNRIGDVFILLSISWMLNFGSWNyIY 169
Cdd:MTH00209 87 LLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNWN-IF 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 170 YYDYFFNSYdySIICFMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSKM-NSVLL 248
Cdd:MTH00209 166 YLNFNSNLG--SVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFfSMSLL 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 249 LIGCLTMFMSGVAANCEFDLKKIIALSTLSQLGLMMGILGAGYPLMSFFHLLTHALFKSLLFLCAGCYIHGLFDNQDIRY 328
Cdd:MTH00209 244 LLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRM 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 329 MGSLTMSMPYTSACLNVANLSLCGFPFLSGFYSKDLILELYSFGFLNMIIFFLFFFSTGLTVMYSFRLLYYSLIKFFSFN 408
Cdd:MTH00209 324 VGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSK 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 409 SLSN-FIIGRDMYFGMFILLLFTIFGGSLLSWLIFPIPACVYLPFGLSMLTVMVILGGLYFGYLLYLLDFSSVNlcnSSF 487
Cdd:MTH00209 404 SLNSsFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKNFFLIK---GYK 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 488 SINFFSSMWFMPLISTNFTSCVGLTVGGLYSSFMDYGWLEYYGAQGVYNFFIYFIKQYLSLFDYNFKTYLMMFSLFFVFM 567
Cdd:MTH00209 481 VNYFLSQMWFLPDLSSQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMMLILLGV 560
|
...
gi 1824669241 568 FLY 570
Cdd:MTH00209 561 ILF 563
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
1-569 |
2.70e-151 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 446.52 E-value: 2.70e-151
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 1 MMSNFYISSFIFFMSGSLLFLMSLIFLYYDISFLVEWEICSFNSSVILMAVILDWMSLIFMSFVLVISSMVLYYSSDYMN 80
Cdd:MTH00207 3 MFKPSSIASYLLWFMSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQ 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 81 GDVNSDRFVILVTLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLVIYYQNVKSVNAGLLTALSNRIGDVFILLSISWML 160
Cdd:MTH00207 83 EDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 161 NFGSWNYIYYYDYFFNSYdysiICFMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLF- 239
Cdd:MTH00207 163 NQGHWSITNMWQTDMNNY----IALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSs 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 240 FSKMNSVLLLIGCLTMFMSGVAANCEFDLKKIIALSTLSQLGLMMGILGAGYPLMSFFHLLTHALFKSLLFLCAGCYIHG 319
Cdd:MTH00207 239 TYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHS 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 320 LFDNQDIRYMGSLTMSMPYTSACLNVANLSLCGFPFLSGFYSKDLILELYSFGFLNMIIFFLFFFSTGLTVMYSFRLLYY 399
Cdd:MTH00207 319 HHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLA 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 400 SLikfFSFNSLSNFIIGRD----MYFGMFILLLFTIFGGSLLSWLIFPIPACVYLPFGLSMLTVMVILGGLYFGYLLYLL 475
Cdd:MTH00207 399 VL---WSPNSSSPYHHLEDedksLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFTTP 475
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 476 DFSSVNLCNSS-FSINFFSSMWFMPLISTNFTSCVGLTVGGLYSSFMDYGWLEYYGAQGVYNFFIYFIKQYLSLFDYNFK 554
Cdd:MTH00207 476 NITKTPLLINNpLSHFASCLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPN 555
|
570
....*....|....*
gi 1824669241 555 TYLMMFSLFFVFMFL 569
Cdd:MTH00207 556 NYLMMSFVLLTIIII 570
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-573 |
5.96e-109 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 338.46 E-value: 5.96e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 1 MMSNFYISSFIFFMSGSLLFLMSLIFLYYD---ISFLVEWEICSFNSSVILMAVILDWMSLIFMSFVLVISSMVLYYSSD 77
Cdd:MTH00211 22 LPLNNSKLHIKKAVKLSFFISLIPLLIFLDqglETILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLW 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 78 YMNGDVNSDRFVILVTLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLVIYYQNVKSVNAGLLTAL-SNRIGDVFILLSI 156
Cdd:MTH00211 102 YMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAViYNRIGDIGLLLSM 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 157 SWML-NFGSWNYiyyYDYFFNSYDYSIICFMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFS 235
Cdd:MTH00211 182 VWLLlNLNSWEI---SQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLS 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 236 PMLFFSKM-NSVLLLIGCLTMFMSGVAANCEFDLKKIIALSTLSQLGLMMGILGAGYPLMSFFHLLTHALFKSLLFLCAG 314
Cdd:MTH00211 259 PLFQNNQLiLGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSG 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 315 CYIHGLFDNQDIRYMGSLTMSMPYTSACLNVANLSLCGFPFLSGFYSKDLILELYSFGFLNMIIFFLFFFSTGLTVMYSF 394
Cdd:MTH00211 339 SIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSF 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 395 RLLYYSLIKFFSFNSLSNFIIGRDMYFG-MFILLLFTIFGGSLLSWLIFPI-PACVYLPFGLSMLTVMVILGGLYFGYLL 472
Cdd:MTH00211 419 RLIFLSLGGYPRFLSLSPINENYKLLKNpLKRLALGSILAGFIITSNLPPEkPEILSLPFLLKLMPLLVTIVGLLLGLEL 498
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 473 ylldFSSVNLCNSSFSINFFSSMWFMPLISTNFTSCVGLTVGGLYS-SFMDYGWLEYYGAQGVYNFFIYFIKQYLSLFDY 551
Cdd:MTH00211 499 ----VNLTHKQLKTSTLSFSNMLGYYPPIIHRLLPKLSLKWGQTLStHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQG 574
|
570 580
....*....|....*....|..
gi 1824669241 552 NFKTYLMMFSLFFVFMFLYIIL 573
Cdd:MTH00211 575 LIKSYLALLLLSLLLILLLFLL 596
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
18-404 |
7.33e-90 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 288.99 E-value: 7.33e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 18 LLFLMSLI----FLYYDI-SFLVEWEICSFNSSVILMAVILDWMSLIFMSFVLVISSMVLYYSSDYMNGDVNSDRFVILV 92
Cdd:MTH00004 42 LAFLISLIpltlFLNSGTeSITTNWPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYL 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 93 TLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLVIYYQNVKSVNAGLLTA-LSNRIGDVFILLSISWM-LNFGSWNYiyy 170
Cdd:MTH00004 122 LIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAiIYNRIGDIGLILSMAWLaMTLNTWEI--- 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 171 yDYFFNSYDYSIICFM-VMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSK-MNSVLL 248
Cdd:MTH00004 199 -QQLFSPTQTPTLPLLgLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQtALTICL 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 249 LIGCLTMFMSGVAANCEFDLKKIIALSTLSQLGLMMGILGAGYPLMSFFHLLTHALFKSLLFLCAGCYIHGLFDNQDIRY 328
Cdd:MTH00004 278 CLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRK 357
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1824669241 329 MGSLTMSMPYTSACLNVANLSLCGFPFLSGFYSKDLILELYSFGFLNMIIFFLFFFSTGLTVMYSFRLLYYSLIKF 404
Cdd:MTH00004 358 MGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGF 433
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
5-573 |
2.77e-88 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 285.33 E-value: 2.77e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 5 FYISSFIFFMSGSLLFLMSLIFLYYDISFLVEWEICSF------NSSVILMAVILDWMSLIFMSFVLVISSMVLYYSSDY 78
Cdd:MTH00208 51 NYNNSNFSISLLKTLAFLSLINLLIWILLGCPNINISLsnwlsnTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYY 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 79 MNGDVNSDRFVILVTLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLVIYYQNVKSVNAGLLTA-LSNRIGDVFILLSIS 157
Cdd:MTH00208 131 MSNDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAvIYNRIGDIGIILFLS 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 158 W-MLNFGSWNYIYYYdyFFNSYDYSIICFM---VMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR 233
Cdd:MTH00208 211 LsLINFNSWNLNEIL--SLNNSNSFLINILlfgILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIR 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 234 FSPML-FFSKMNSVLLLIGCLTMFMSGVAANCEFDLKKIIALSTLSQLGLMMGILGAGYPLMSFFHLLTHALFKSLLFLC 312
Cdd:MTH00208 289 TSPLIsNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLC 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 313 AGCYIHGLFDNQDIRYMGSLTMSMPYTSACLNVANLSLCGFPFLSGFYSKDLILELYSFGFLNMIIFFLFFFSTGLTVMY 392
Cdd:MTH00208 369 SGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVY 448
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 393 SFRLLYYSLIKFFSFNSLSNFI-IGRDMYFGMFILLLFTIFGGSLLSWLIFPIPACVYLPFGLSMLTVMVILGGLYFGYL 471
Cdd:MTH00208 449 SFRIIFFCFLNNPSFSPLSPISeENPNLTNPLLRLAIGTIISGWFFSNFVFNLPPLTLPLILKSLPLIVTIIGAAFSFSF 528
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 472 LYlldFSSVNLCNSSFSINFFSSMWFMPLISTNFTSCVGLTVGGLYSSFMDYGWLEYYGAQGVYNFFIYFIKQYLSLFDY 551
Cdd:MTH00208 529 LL---SLSSNPINSNFFSFLSNQWFFVNISHSIIISFSFFTSLFGSTRTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTG 605
|
570 580
....*....|....*....|..
gi 1824669241 552 NFKTYLMMFSLFFVFMFLYIIL 573
Cdd:MTH00208 606 YIKQYLLSSTLLFLLILTLSLI 627
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
11-398 |
2.87e-88 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 284.74 E-value: 2.87e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 11 IFFMSGSLLFLMSLIFLYYD---ISFLVEW-EICSFNSSVILMaviLDWMSLIFMSFVLVISSMVLYYSSDYMNGDVNSD 86
Cdd:COG1009 35 ALAPLAAFVLSLLLFPAVLGgevVVELYTWiPVGSLGLDFGFR---LDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLA 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 87 RFVILVTLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLVIYYQNVKSVNAGLLTA-LSNRIGDVFILLSISWMLN-FGS 164
Cdd:COG1009 112 RFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAfLVTRVGDLGLLLGILLLGAiAGT 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 165 WNY---IYYYDYFFNSYDYSIICFMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFS 241
Cdd:COG1009 192 LNFselLAAAPTILSSPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALS 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 242 KM-NSVLLLIGCLTMFMSGVAANCEFDLKKIIALSTLSQLGLMMGILGAGYPLMSFFHLLTHALFKSLLFLCAGCYIHGL 320
Cdd:COG1009 272 PVwLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHAT 351
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1824669241 321 fDNQDIRYMGSLTMSMPYTSACLNVANLSLCGFPFLSGFYSKDLILE-LYSFGFLNMIIFFLFFFSTGLTVMYSFRLLY 398
Cdd:COG1009 352 -GTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFLTAFYSFRLFF 429
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
20-571 |
1.32e-83 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 272.17 E-value: 1.32e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 20 FLMSLI----FLYYDI-SFLVEWEICSFNSSVILMAVILDWMSLIFMSFVLVISSMVLYYSSDYMNGDVNSDRFVILVTL 94
Cdd:MTH00066 42 FFISLIplmiFINQGLeSITTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLI 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 95 FVLSMMFLIISPNLVSVLLGWDGLGLVSYCLVIYYQNVKSVNAGLLTA-LSNRIGDVFILLSISW-MLNFGSWNYiyyyD 172
Cdd:MTH00066 122 FLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHARADANTAALQAvLYNRVGDIGLILSMAWlAMNTNSWEL----Q 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 173 YFFNSYDYSIICFMVM-FAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSKMN-SVLLLI 250
Cdd:MTH00066 198 QIFLLNDNSTLPLLGLiLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTAlTICLCL 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 251 GCLTMFMSGVAANCEFDLKKIIALSTLSQLGLMMGILGAGYPLMSFFHLLTHALFKSLLFLCAGCYIHGLFDNQDIRYMG 330
Cdd:MTH00066 278 GALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMG 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 331 SLTMSMPYTSACLNVANLSLCGFPFLSGFYSKDLILELYSFGFLNMIIFFLFFFSTGLTVMYSFRLLYYSLIKFFSFNSL 410
Cdd:MTH00066 358 GLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPL 437
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 411 SNFIIGRDMYFGMFILLLF-TIFGGSLLSWLIFPI-PACVYLPFGLSMLTVMVILGGLYFGYLLYLLDFSSVNlcnSSFS 488
Cdd:MTH00066 438 SPINENNPLIINPIKRLAWgSIIAGLLIIFNILPMkPQILTMPTFMKLAALLVTLLGLLIALDLAKITSKTTP---KTKM 514
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 489 INFFSSMWFMPLISTNFTSCVGLTVGGLYSSF-MDYGWLEYYGAQGVYNFFIYFIKQYLSLFDYNFKTYLMMFSLFFVFM 567
Cdd:MTH00066 515 HSFSNLLAFFPTIIHRLSPKTNLNSGQNIATHlTDMTWYEKSGPKGLTNQQLPPIKTITNIQTGLIKTYLTLFLITLLLM 594
|
....
gi 1824669241 568 FLYI 571
Cdd:MTH00066 595 LILL 598
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
53-397 |
1.50e-81 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 267.79 E-value: 1.50e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 53 LDWMSLIFMSFVLVISSMVLYYSSDYMNGDVNSDRFVILVTLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLVIYYQNV 132
Cdd:PRK06590 82 VDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKK 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 133 KSVNAGLLTA-LSNRIGDVFILLSISWML-NFGSWNYIYYYDYFFNSYDYS-----IICFMVMFAGMTKSAQIPFSAWLP 205
Cdd:PRK06590 162 PSAGAAAMKAfIVNRVGDVGLALGIFLLFaEFGSLNYDEVFAAAPQFFGLGwsaltLICLLLFIGAMGKSAQFPLHTWLP 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 206 AAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMlfFSKMNSVLLLIGCL---TMFMSGVAANCEFDLKKIIALSTLSQLGL 282
Cdd:PRK06590 242 DAMEGPTPVSALIHAATMVTAGVYLVARMSPL--FELSPEALLFVAIVgavTALFAAFIGLVQTDIKRVLAYSTMSQLGY 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 283 MMGILGAGYPLMSFFHLLTHALFKSLLFLCAGCYIHGLFDNQDIRYMGSLTMSMPYTSACLNVANLSLCGFPFLSGFYSK 362
Cdd:PRK06590 320 MFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSK 399
|
330 340 350
....*....|....*....|....*....|....*
gi 1824669241 363 DLILElYSFGFLNMIIFFLFFFSTGLTVMYSFRLL 397
Cdd:PRK06590 400 DEILE-AAFANGHINLFVAGLVGAFLTAFYSFRLI 433
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
50-444 |
3.72e-80 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 263.76 E-value: 3.72e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 50 AVILDWMSLIFMSFVLVISSMVLYYSSDYMNGDVNSDRFVILVTLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLV-IY 128
Cdd:TIGR01974 78 GLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIgFW 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 129 YQNVKSVNAGLLTALSNRIGDVFILLSISWMLN-FGSWNYIYYYDYFFNS--YDYSIICFMVMFAGMTKSAQIPFSAWLP 205
Cdd:TIGR01974 158 YKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWyFGTLNFQEVFALAPGAffSALTLICLLLFIGAMGKSAQLPLHTWLP 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 206 AAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFS-KMNSVLLLIGCLTMFMSGVAANCEFDLKKIIALSTLSQLGLMM 284
Cdd:TIGR01974 238 DAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSpTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMF 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 285 GILGAGYPLMSFFHLLTHALFKSLLFLCAGCYIHGLFDNQDIRYMGSLTMSMPYTSACLNVANLSLCGFPFLSGFYSKDL 364
Cdd:TIGR01974 318 LALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDL 397
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 365 ILE-LYSFGFLnMIIFFLFFFSTGLTVMYSFRLLYyslIKFFSFNSLSNFIIGRD----MYFGMFILLLFTIFGGSLLSW 439
Cdd:TIGR01974 398 ILEaAFASGTH-SFLFVAGLIGAFLTAFYSFRLIF---MVFHGKERHEADAHPHEsplvMLLPLIVLAVGSVFAGFFIVP 473
|
....*
gi 1824669241 440 LIFPI 444
Cdd:TIGR01974 474 LFEFL 478
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
17-412 |
3.33e-75 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 250.16 E-value: 3.33e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 17 SLLFLMSLI----FLYYDISFLV-EWEICSFNSSVILMAVILDWMSLIFMSFVLVISSMVLYYSSDYMNGDVNSDRFVIL 91
Cdd:MTH00108 41 SYAFIISLIptmmFIHSGQEMIIsNWHWMTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKY 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 92 VTLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLVIYYQNVKSVNAGLLTA-LSNRIGDVFILLSISW-MLNFGSWNYiy 169
Cdd:MTH00108 121 LLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAiLYNRIGDIGFILAMAWfLLNLNSWDL-- 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 170 yYDYFFNSYDYSIICFM-VMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSK-MNSVL 247
Cdd:MTH00108 199 -QQIFMLNPNNSNLPLMgLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKtIQTLT 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 248 LLIGCLTMFMSGVAANCEFDLKKIIALSTLSQLGLMMGILGAGYPLMSFFHLLTHALFKSLLFLCAGCYIHGLFDNQDIR 327
Cdd:MTH00108 278 LCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIR 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 328 YMGSLTMSMPYTSACLNVANLSLCGFPFLSGFYSKDLILELYSFGFLNMIIFFLFFFSTGLTVMYSFRLLYYSLIKFFSF 407
Cdd:MTH00108 358 KMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRF 437
|
....*
gi 1824669241 408 NSLSN 412
Cdd:MTH00108 438 PPLIT 442
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
54-411 |
3.65e-73 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 245.13 E-value: 3.65e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 54 DWMSLIFMSFVLVISSMVLYYSSDYMNGDVNSDRFVILVTLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLVIYYQNVK 133
Cdd:MTH00137 87 DHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRA 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 134 SVNAGLLTA-LSNRIGDVFILLSISWML-NFGSWNYiyyYDYFFNS--YDYSIICFMVMFAGMTKSAQIPFSAWLPAAMA 209
Cdd:MTH00137 167 DANTAALQAvIYNRVGDIGLILAMAWMAtNLNSWEI---QQIFALSkdFDLTLPLLGLILAATGKSAQFGLHPWLPSAME 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 210 APTPVSALVHSSTLVTAGVYLLIRFSPMLFFSKMN-SVLLLIGCLTMFMSGVAANCEFDLKKIIALSTLSQLGLMMGILG 288
Cdd:MTH00137 244 GPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTAlTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIG 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 289 AGYPLMSFFHLLTHALFKSLLFLCAGCYIHGLFDNQDIRYMGSLTMSMPYTSACLNVANLSLCGFPFLSGFYSKDLILEL 368
Cdd:MTH00137 324 LNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEA 403
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1824669241 369 YSFGFLNMIIFFLFFFSTGLTVMYSFRLLYYSLIKFFSFNSLS 411
Cdd:MTH00137 404 LNTSHLNAWALTLTLIATSFTAVYSLRVVFFVSMGHPRFNPLS 446
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
54-571 |
5.82e-71 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 239.21 E-value: 5.82e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 54 DWMSLIFMSFVLVISSMVLYYSSDYMNGDVNSDRFVILVTLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLV-IYYQNV 132
Cdd:MTH00020 79 DGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLInFWLTRI 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 133 KSVNAGLLTALSNRIGDVFILLSISWMLN-FGSWNY--IYYYDYFFNSYDYSIICFMVMFAGMTKSAQIPFSAWLPAAMA 209
Cdd:MTH00020 159 EANKAAIKAMLVNRVGDIGLLLAMFLLWDrFGSLDFssVFNMVVSAPSSDITLICLFLFIGAVGKSAQLGLHTWLPDAME 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 210 APTPVSALVHSSTLVTAGVYLLIRFSPMLFFSKMNSVLL-LIGCLTMFMSGVAANCEFDLKKIIALSTLSQLGLMMGILG 288
Cdd:MTH00020 239 GPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVtIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACG 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 289 AGYPLMSFFHLLTHALFKSLLFLCAGCYIHGLFDNQDIRYMGSLTMSMPYTSACLNVANLSLCGFPFLSGFYSKDLILEL 368
Cdd:MTH00020 319 LSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILEL 398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 369 YSFGFLNMIIFFLFFFSTGLTVMYSFRLLYYSlikFFSFNSLSNFIIGR------DMYFGMFILLLFTIFGGSLLSWLIF 442
Cdd:MTH00020 399 AFGQYYLIFAYWLGCFSALLTAFYSIRLIYLT---FLSNTNLKKAVFFHlhegdwNLLLPLGILALGSIFVGYLAKEMIW 475
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 443 PIPACVY---------LPFGLSMLTVMVILGGLYFGYLLYLLDFSSVNLcnssFSINFFSSMWFMPLISTNFTSCVGLTV 513
Cdd:MTH00020 476 SFQITLPpivplsiklLPVFLSLGGIGLVIILYFYSSKTFRVPFSFIGR----NSYTFLGSAWQFNYILNYFLIKKIWKG 551
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 1824669241 514 GGLYS-SFMDYGWLEYYGAQGVYNFFIYFIKQYLSLFDYNFKTYLMMFSLFFVFMFLYI 571
Cdd:MTH00020 552 GHLISyRTIDKGVLELVGPKGISNFLIILTQGLSSLQSGLVFNYALVILIGVAIFIWGL 610
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
16-402 |
1.58e-67 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 230.28 E-value: 1.58e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 16 GSLLFLMSLIFLYYDISFLVEWEICsFNSSVIL---------------MAVILDWMSLIFMSFVLVISSMVLYYSSDYMN 80
Cdd:MTH00210 27 GAGILTSSCIVISAIVSCCIFYETT-LNGSATYiklwrwfdsellttyFGLQFDSLTSTMLIVITSVSALVHIYSTGYMS 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 81 GDVNSDRFVILVTLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLV-IYYQNVKSVNAGLLTALSNRIGDVFILLSISWM 159
Cdd:MTH00210 106 GDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLInFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMI 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 160 LN-FGSWNY--IY-YYDYFFNSYDYSIICFMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFS 235
Cdd:MTH00210 186 LKeFGTLEFstISsLLVTNINKESLTIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSG 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 236 PMLFFSKMNSVLL-LIGCLTMFMSGVAANCEFDLKKIIALSTLSQLGLMMGILGAGYPLMSFFHLLTHALFKSLLFLCAG 314
Cdd:MTH00210 266 PLFEGSPLALTIVtILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAG 345
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 315 CYIHGLFDNQDIRYMGSLTMSMPYTSACLNVANLSLCGFPFLSGFYSKDLILELYSFGFLNMIIFFLFFFSTGLTVMYSF 394
Cdd:MTH00210 346 SVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYSI 425
|
....*...
gi 1824669241 395 RLLYYSLI 402
Cdd:MTH00210 426 RLIYLTFI 433
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
49-396 |
1.57e-61 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 215.27 E-value: 1.57e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 49 MAVILDWMSLIFMSFVLVISSMVLYYSSDYMNGDVNSDRFVILVTLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLV-I 127
Cdd:PRK07376 85 MGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVgF 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 128 YYQNVKSVNAGLLTALSNRIGDVFILLSISWMLnfgswnyiyyydYFFNSYDYSII---------------------CFM 186
Cdd:PRK07376 165 WYDRKGAADAAQKAFVVNRVGDFGLLLGILGLF------------WATGSFDFDGIadrlselvssgavsgwlalllCIL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 187 VMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMlfFSKMNSVLLLI---GCLTMFMSGVAAN 263
Cdd:PRK07376 233 VFLGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPV--FEQFPAVMTVIawtGAITAFLGASIAL 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 264 CEFDLKKIIALSTLSQLGLMMGILGAGYPLMSFFHLLTHALFKSLLFLCAGCYIHGLFD--------NQDIRYMGSLTMS 335
Cdd:PRK07376 311 TQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQDMRLMGGLRKY 390
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1824669241 336 MPYTSACLNVANLSLCGFPFLSGFYSKDLILELySFGfLNMIIFFLFFFSTGLTVMYSFRL 396
Cdd:PRK07376 391 MPITAITFLIGCLAISGIPPFAGFWSKDEILGA-AFE-ANPALWFVGFLTAGMTAFYMFRM 449
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
1-447 |
1.44e-59 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 206.69 E-value: 1.44e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 1 MMSNFYISSFIFFMSGSLLFLMSLIFLYYdisFLVEWEICSFNssvilmaVILDWMSLIFMSFVLVISSMVLYYSSDYMN 80
Cdd:MTH00095 1 MNILIFLILFFFFFLLLFILFLPFMKLNL---FFLEWDFLSLK-------FNFYFNSLLFSLILLLVTLSVLVFSSYYMN 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 81 GDVNSDRFVILVTLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLVIYYQNVKSVNAGLLTALSNRIGDVFILLSISWML 160
Cdd:MTH00095 71 GELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIFLFFSGFI 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 161 NFGswnyiyyYDYFFNSYDYSIICFMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFF 240
Cdd:MTH00095 151 FSS-------YYFFSFSFFSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILN 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 241 SKMNSVLLLIGCLTMFMSGVAANCEFDLKKIIALSTLSQLGLMMGILGAGYPLMSFFHLLTHALFKSLLFLCAGCYIHGL 320
Cdd:MTH00095 224 MNVMKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSN 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 321 FDNQDIRYMGSLTMSMPYTSACLNVANLSLCGFPFLSGFYSKDLILELYSFGFLNMIIFFLFFFSTGLTVMYSFRLLYYS 400
Cdd:MTH00095 304 FGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSF 383
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 1824669241 401 LIKFFSFnsLSNFIIGRDMYFGMFILLLFTIFGGSLLSWLIFPIPAC 447
Cdd:MTH00095 384 FLSFSKV--VNVYSSSVLMNFLSLMLVFFSVFFLWWLNFNLLNLPSL 428
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
49-372 |
4.84e-53 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 191.71 E-value: 4.84e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 49 MAVILDWMSLIFMSFVLVISSMVLYYSSDYMNGDVNSDRFVILVTLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLVIY 128
Cdd:MTH00032 74 IGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAF 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 129 YQNVKSVNAGLLTAL-SNRIGDVFILLSISWM------LNFGSWN------------YIYYYDYFFNSYDYSIICFMVMF 189
Cdd:MTH00032 154 WTTRIQANKAAIKAIvVNRVGDVGVILGMVLIyktigsLDFLTFNggsvgsgimdrgYYGGGAYESPLAPFAIIGILLLI 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 190 AGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMlfFSKMNSVLLLI---GCLTMFMSGVAANCEF 266
Cdd:MTH00032 234 GCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPL--FEKAPLTLLIItifGALTAFFAATVGLVQN 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 267 DLKKIIALSTLSQLGLMMGILG-AGYPLMSFFHLLTHALFKSLLFLCAGCYIHGL-FDNQDIRYMGSLTMSMPYTSACLN 344
Cdd:MTH00032 312 DLKKVIAYSTCSQLGYMVLIIGiEGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTtVDEQDMRKMGGLIHSIPFTYTMML 391
|
330 340
....*....|....*....|....*...
gi 1824669241 345 VANLSLCGFPFLSGFYSKDLILELYSFG 372
Cdd:MTH00032 392 IGSFSIMGLPYLTGFYSKDLILELTYSG 419
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
43-396 |
3.97e-49 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 183.32 E-value: 3.97e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 43 NSSVILMAVILDWMSLIFMSFVLVISSMVLYYSSDYMNGDVNSDRFVILVTLFVLSMMFLIISPNLVSVLLGWDGLGLVS 122
Cdd:PRK12650 67 NGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLAS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 123 YCLVIyyQNVKSVNAGLL-TALSNRIGDVFILL------------SISWMLNFGSWNYiyyydyffNSYDYSIICFMVMF 189
Cdd:PRK12650 147 FFLIA--RSGSGGEAGSIrTLILTFFGGLTLLAavaiaatqtgttSLSGILHSDVWAE--------KPGLTTVVAVLIAV 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 190 AGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPmLFFSKMNSVLLLIGC--LTMFMSGVAANCEFD 267
Cdd:PRK12650 217 AAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSP-VFHDVAVWNWLLIIVgmITALMGAVFAVQKTD 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 268 LKKIIALSTLSQLGLMMGILGAGYPL---MSFFHLLTHALFKSLLFLCAGCYIHGLfDNQDIRYMGSLTMSMPYTSACLN 344
Cdd:PRK12650 296 LKKLTAYSTVSQLGWIVATIGVGTPFaltAAVVHTLAHALFKSSLFMLIGVVDHQA-GTRDIRRLGSLWRRMPFTFVSVT 374
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 1824669241 345 VANLSLCGFPFLSGFYSKDLILELYSFGFLNMIIFFLFFFSTGL----TVMYSFRL 396
Cdd:PRK12650 375 IAALSMAAVPPLFGFVSKEGMLTAFLEAPGGNAGVVLLLVGAALgavfTFAYSARL 430
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
105-387 |
1.21e-45 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 162.48 E-value: 1.21e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 105 SPNLVSVLLGWDGLGLVSYCLVIYY-QNVKSVNAGLLTALSNRIGDVFILLSISWMLNFGSWNYIY----YYDYFFNSYD 179
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDelskALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 180 YSIICFMVMFAGMTKSAQIPFSAWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLFFS--KMNSVLLLIGCLTMF 256
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSspFIQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 257 MSGVAANCEFDLKKIIALSTLSQLGLMMGILGAGYPL---MSFFHLLTHALFKSLLFLCAGCYIHGLFDNQDIRYMGSLT 333
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1824669241 334 MSMPYTSACLNVANLSLCGFPFLSGFYSKDLILELysfGFLNMIIFFLFFFSTG 387
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAA---AVAASWIFLVLAGVVG 290
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
53-399 |
2.45e-43 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 159.93 E-value: 2.45e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 53 LDWMSLIFMSFVLVISSMVLYYSSDYMNGDVNSDRFVILVTLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLVIYYQNV 132
Cdd:COG0651 74 ADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTK 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 133 KSVNAGLLTALSNRIGDVFILLSISWM-LNFGSWNY--IYYYDYFFNSYDYSIICFMVMFAGMTKSAQIPFSAWLPAAMA 209
Cdd:COG0651 154 EALRAGLKYLILNLVGSALFLLGVGLLyGATGTLNMadLAARLAELDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYP 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 210 -APTPVSALVhSSTLVTAGVYLLIRFSPMLF----FSKMNSVLLLIGCLTMFMSGVAANCEFDLKKIIALSTLSQLGLMM 284
Cdd:COG0651 234 aAPSPVSALL-SGLLTKVGVYAILRVLTLLFgadpALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYIL 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 285 GILGAGYPLM---SFFHLLTHALFKSLLFLCAGCYIHGLfDNQDIRYMGSLTMSMPYTSACLNVANLSLCGFPFLSGFYS 361
Cdd:COG0651 313 LGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERAT-GTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVS 391
|
330 340 350
....*....|....*....|....*....|....*...
gi 1824669241 362 KDLILElYSFGFLNMIIFFLFFFSTGLTVMYSFRLLYY 399
Cdd:COG0651 392 KWLLLQ-AALEAGAWLLAAVLLLSSLLTLAYFVRIFGR 428
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
53-394 |
3.29e-43 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 164.71 E-value: 3.29e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 53 LDWMSLIFMSFVLVISSMVLYYSSDYMNGDVNSDRFVILVTLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLVIY-YQN 131
Cdd:PRK12647 62 LDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFnHER 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 132 VKSVNAGLLTALSNRIGDV-----FILL-------SISWMLNFGswnyiyyyDYFFNSYDYSIICFMVMFAGMTKSAQIP 199
Cdd:PRK12647 142 EAARRAALQALLVTGGGGLallagLILLgnvtgtySLSELLASG--------DVIREHPLYLAILLLVLGGAFTKSAQFP 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 200 FSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSKM-NSVLLLIGCLTMFMSGVAANCEFDLKKIIALSTLS 278
Cdd:PRK12647 214 FHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLwQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVS 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 279 QLGLMMGILGAGYPLM---SFFHLLTHALFKSLLFLCAGCYIHGLfDNQDIRYMGSLTMSMPYTSACLNVANLSLCGFPF 355
Cdd:PRK12647 294 ALGTLVMLLGLGSELAikaAVLFLVAHSLYKGALFMVAGIIDHET-GTRDITKLGGLRRAMPITAAAALLAALSMAGLPP 372
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 1824669241 356 LSGFYSKDLILE-LYSFGFLNMIIFFLFFFSTGLTVMYSF 394
Cdd:PRK12647 373 LFGFLAKELIYEaLLEAPLWSLILTVAAVLGNALMVAVAF 412
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
70-395 |
1.03e-42 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 163.14 E-value: 1.03e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 70 MVLYYSSDYMNGDVNSDRFVILVTLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLV-IYYQNVKSVNAGLLTALSNRIG 148
Cdd:CHL00025 106 LVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPIAANACQKAFVTNRVG 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 149 DVFILLSIS---WMLnfGSWNYIYYYDYFFNSYDYS-------IICFMVMFAG-MTKSAQIPFSAWLPAAMAAPTPVSAL 217
Cdd:CHL00025 186 DFGLLLGILgfyWIT--GSFEFRDLFEIFNNLIYNNevnllfaTLCAFLLFLGpVAKSAQFPLHVWLPDAMEGPTPISAL 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 218 VHSSTLVTAGVYLLIRFSPmLF--FSKMNSVLLLIGCLTMFMSGVAANCEFDLKKIIALSTLSQLGLMMGILGAGYPLMS 295
Cdd:CHL00025 264 IHAATMVAAGIFLVARLLP-LFivIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAA 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 296 FFHLLTHALFKSLLFLCAGCYIHGL--------FDNQDIRYMGSLTMSMPYTSACLNVANLSLCGFPFLSGFYSKDLILe 367
Cdd:CHL00025 343 LFHLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEIL- 421
|
330 340
....*....|....*....|....*....
gi 1824669241 368 lySFGFLNMIIFFLFFFST-GLTVMYSFR 395
Cdd:CHL00025 422 --NDSWLYSPIFAIIAWSTaGLTAFYMFR 448
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
11-462 |
1.28e-41 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 157.35 E-value: 1.28e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 11 IFFMSGSLLFLMSLIFLYYDISFLVEWEICSFNSSVILMAVILDWMSLIFMSFVLVISSMVLYYSSDYMNGDVNSDRFVI 90
Cdd:MTH00063 1 SVLLVSLLLCLLIFFLFLVGVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 91 LVTLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLVIYYQNVKSVNAGLLTALSNRIGDVFILLSISWmlnfgswnyiyy 170
Cdd:MTH00063 81 LIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLIGL------------ 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 171 ydYFFNSYDYSIICFMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSKMNSVLLLI 250
Cdd:MTH00063 149 --SCWGGSGSFLCCLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVL 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 251 GCLTMFMSGVAANCEFDLKKIIALSTLSQLGLMMGILGAGYPLMSFFHLLTHALFKSLLFLCAGCYIHGLFDNQDIRYMG 330
Cdd:MTH00063 227 LLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCVY 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 331 SLTMSMPYTSACLNVANLSLCGFPFLSGFYSKDLILELYSFGFLNMIIFFLFFFSTGLTVMYSFRLLyysLIKFFSFNSL 410
Cdd:MTH00063 307 SSILYGSWNLFYLFLLVLGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLC---LILFGVKSSL 383
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 1824669241 411 SNFIigrdmYFGMFILLLFTIFGGSLLSWLIFPIPACVYLPFGLSMLTVMVI 462
Cdd:MTH00063 384 SSGV-----RFLFFNSGLMVFLWLFINYYVFLLLDEVVYLGVFISLVLLLVQ 430
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
53-397 |
7.61e-39 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 152.22 E-value: 7.61e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 53 LDWMSLIFMSFVLVISSMVLYYSSDYMN-GDVNSDRFVILVTLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLVIY-YQ 130
Cdd:PRK12646 76 LDGLSLMFSLIISLIGIAVFFYATQYLSsRKDNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYwYN 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 131 NVKSVNAGLLTALSNRIGDVFILLSISWMLNFGSWNYIY----YYDYFFNSYDYSIICFMVMFAGMTKSAQIPFSAWLPA 206
Cdd:PRK12646 156 NGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITeilgQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPR 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 207 AMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSKMN-SVLLLIGCLTMFMSGVAANCEFDLKKIIALSTLSQLGLMMG 285
Cdd:PRK12646 236 AMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYiYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMA 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 286 ILGAG--------------YPLMSF---FHLLTHALFKSLLFLCAGCYIHGLfDNQDIRYMGSLTMSMPYTSACLNVANL 348
Cdd:PRK12646 316 MVGIGggyaqhqqdaiasiYVFVLFaalFHLMNHAIFKCALFMGVGIIDHEA-GTRDIRILSGMRQLFPKMNLVMTIAAL 394
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1824669241 349 SLCGFPFLSGFYSKDLIL-------ELYSFGFLNMIIF-FLFFFSTGLTVMYSFRLL 397
Cdd:PRK12646 395 SMAGVPFLNGFLSKEMFLdaltqtgQLSQFSLISMIIIvFIGVIASIFTFTYALYMV 451
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
53-398 |
7.41e-37 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 146.61 E-value: 7.41e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 53 LDWMSLIFMSFVLVISSMVLYYSSDYM-NGDVNSDRFVILVTLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLVIYYQN 131
Cdd:PRK12644 72 LDALAALMSLLVLGVGALVLLYCARYFdDDEPRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIGHYAE 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 132 VKS-----VNAGLLTA---LSNRIGdvFILLSISwmlnFGSWNYIYYYDYFFNSYDYSIICFMVMFAGMTKSAQIPFSAW 203
Cdd:PRK12644 152 RAAsrraaLQALLVTTaggLAMLVG--IIILGQA----AGTYRLSELLADPPTGPAVSVAVVLILVGALSKSAIVPFHFW 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 204 LPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMlfFSKMNS---VLLLIGCLTMFMSGVAANCEFDLKKIIALSTLSQL 280
Cdd:PRK12644 226 LPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPG--FADVPVwrpTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQL 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 281 GLMMGILGAGYP---LMSFFHLLTHALFKSLLFLCAGCYIHGLfDNQDIRYMGSLTMSMPYTSACLNVANLSLCGFPFLS 357
Cdd:PRK12644 304 GFLTVLVGIGTRdaaLAGLAMLLAHALFKAALFLVVGIIDHST-GTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLL 382
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 1824669241 358 GFYSKDLILE--LYS--FGFLNMIIFFLFFFSTGLTVMYSFRLLY 398
Cdd:PRK12644 383 GFVAKEAALEavLHDgaLGPAGPVVLAGIVLGSILTVAYSLRFLW 427
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
51-367 |
3.42e-36 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 144.22 E-value: 3.42e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 51 VILDWMSLIFMSFVLVISSMVLYYSSDYMNGDVNSDRFVILVTLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLVIYY- 129
Cdd:TIGR00940 71 LYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWh 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 130 QNVKSVNAGLLTALSNRIGDVFILLSISWML----NFGSWNYIYYYDYFFNSYDYSIICFMVMFAGMTKSAQIPFSAWLP 205
Cdd:TIGR00940 151 HRAHSRYGAQKSLTITVFGGLAMLGGLILLGkitgSFSIDAVIASADAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWLP 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 206 AAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSKMNSVLL-LIGCLTMFMSGVAANCEFDLKKIIALSTLSQLGLMM 284
Cdd:TIGR00940 231 DAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVgLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIM 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 285 GILGAGYPLMSF----------------FHLLTHALFKSLLFLCAGCYIHGLfDNQDIRYMGSLTMSMPYTSACLNVANL 348
Cdd:TIGR00940 311 VLLGLGSPSYHYqgddskiyalaavaavFHLINHATFKGSLFMAAGIIDHET-GTRDIRKLGGLFHIMPITFTLAMIASA 389
|
330
....*....|....*....
gi 1824669241 349 SLCGFPFLSGFYSKDLILE 367
Cdd:TIGR00940 390 AMAGVPPFNGFLSKEMFFA 408
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
53-398 |
3.01e-35 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 141.48 E-value: 3.01e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 53 LDWMSLIFMSFVLVISSMVLYYSSDYMNGDVNSDRFVILVTLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLVIYYQNV 132
Cdd:PRK12648 74 LDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHR 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 133 KSVNAGLLTALS-------NRIGDVFILLSISwmlnfGSwnyiYYYDYFFNSYD-------YSIICFMVMFAGMTKSAQI 198
Cdd:PRK12648 154 ADARRGARMALTvtgagglALLAGVLLLGHIV-----GS----YDLDVVLAAGDlirahplYPPALVLILLGAFTKSAQF 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 199 PFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML------FFskmnsVLLLIGCLTMFMSGVAANCEFDLKKII 272
Cdd:PRK12648 225 PFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLagteewFW-----IVGGAGLITLLLGAYFALFQHDLKGLL 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 273 ALSTLSQLGLMMGILGAGYPL---MSFFHLLTHALFKSLLFLCAGCYIH--GlfdNQDIRYMGSLTMSMPYTSACLNVAN 347
Cdd:PRK12648 300 AYSTISHLGLITLLLGLGSPLaavAAIFHIINHATFKASLFMAAGIIDHetG---TRDMRRLSGLRRLMPITATLAMVAA 376
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1824669241 348 LSLCGFPFLSGFYSKDL----ILELYSFGFLNMIIFFLFFFSTGLTVMYSFRLLY 398
Cdd:PRK12648 377 AAMAGVPLLNGFLSKEMffaeTLDTHLLGSLDWLLPVAATLAGAFSVAYSLRFIH 431
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
45-366 |
6.80e-33 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 131.63 E-value: 6.80e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 45 SVILMAVILDWMSLIFMSFVLVISSMVLYYSSDYMN-------GDVNSDRFVILVTLFVLSMMFLIISPNLVSVLLGWDG 117
Cdd:PRK06525 65 DVALFGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEI 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 118 LGLVSYCLVIYYQNVKSVNAGLLTALSNRIGDVFILLSISWM-LNFGSWNYIYYYDyfFNSYDYSIICFMVMFAGMTKSA 196
Cdd:PRK06525 145 TGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLfLQTGTFALSALSG--LHGSLKYLVFLGILFAAWGKSA 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 197 QIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRF------SPMLFFskmnSVLLLIGCLTMFMSGVAANCEFDLKK 270
Cdd:PRK06525 223 QLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAiqsmgpIPHVIG----YVGAVMAIVTLLYGFLMYLPQQDMKR 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 271 IIALSTLSQLGLM-----MGILGAGYPLM-SFFHLLTHALFKSLLFLCAGCYIHGLfDNQDIRYMGSLTMSMPYTSACLN 344
Cdd:PRK06525 299 LLAYSTITQLGYMffglsLAILGSRLALEgSIAYIFNHAFAKSLFFLVAGALSYSC-GTRLLPRLRGVLKKLPLVGVGFC 377
|
330 340
....*....|....*....|..
gi 1824669241 345 VANLSLCGFPFLSGFYSKDLIL 366
Cdd:PRK06525 378 VAALAITGVPPFNGFFSKFPIF 399
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
51-398 |
4.33e-31 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 128.89 E-value: 4.33e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 51 VILDWMSLIFMSFVLVISSMVLYYSSDYMNGDVNS-DRFVILVTLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLVIY- 128
Cdd:PRK12645 74 LYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKEQlGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYw 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 129 YQNVKSVNAGLLTALSNRIGDV-----FILLSISwmlnFGSWN---YIYYYDYFFNSYDYSIICFMVMFAGMTKSAQIPF 200
Cdd:PRK12645 154 YEREASRYGAQKSMLITVFGGLsmlggFILLYIM----TGSFSireMIANADEIQNSPLFIPAMILILLGAFTKSAQFPF 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 201 SAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSKMNSVLL-LIGCLTMFMSGVAANCEFDLKKIIALSTLSQ 279
Cdd:PRK12645 230 YIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVtLVGLITLFWGSLNAVKQTDLKGILAFSTVSQ 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 280 LGLMMGILGAG-------------YPLMSF---FHLLTHALFKSLLFLCAGCYIHGLfDNQDIRYMGSLTMSMPYTSACL 343
Cdd:PRK12645 310 LGLIMSLLGIGaaslhyqgddskiYAAAITaaiFHLINHATFKGSLFMIVGIVDHET-GTRDIRKLGGLMTIMPITFTIA 388
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1824669241 344 NVANLSLCGFPFLSGFYSKDLILE---------LYSFGFLNMIIFFLFFFSTGLTVMYSFRLLY 398
Cdd:PRK12645 389 LIGALSMAGLPPFNGFLSKEMFFEsmlnateanLFSLDTWGVLFPVIAWVASVFTFVYSIIFIF 452
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
54-397 |
1.05e-29 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 124.56 E-value: 1.05e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 54 DWMSLIFMSFVLVISSMVLYYSSDYMNGDVNSDRFVILVTLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLVIYYQNVK 133
Cdd:PRK12649 79 DGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHRP 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 134 SVNAGLLTALSNRIGDVFILLSISWMLNFGSWNY--------IYYYDYFFNSYDYSIICFMVMFAGMTKSAQIPFSAWLP 205
Cdd:PRK12649 159 ESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYdiatilqdSELIENIKGHPLFLITLILIFIGAAAKSAQGPFYIWLP 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 206 AAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMlfFSKMNSVLLLI---GCLTMFMSGVAANCEFDLKKIIALSTLSQLGL 282
Cdd:PRK12649 239 NAMEAPTPVSAFLHSATMVKAGVYLVARIHPI--FSGTEAWFILVsgtGMITMVLAGFLAFRQTDIKAILAYSTISQLAY 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 283 MMGILG---AGYPLMSF----FHLLTHALFKSLLFLCAGCYIHGLfDNQDIRYMGSLTMSMPYTSACLNVANLSLCGFPF 355
Cdd:PRK12649 317 LMTMYGyttYHEPGLGVaaatFHLLNHATFKACLFLVAGIVAHEA-ATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 1824669241 356 LSGFYSKDLILEL-----YSFGFLNMIIFFLFFFSTG-LTVMYSFRLL 397
Cdd:PRK12649 396 LNGFLSKEMFYETsvemgALIGGPFTIIIPAVAVLGGvFTFAYSIKLI 443
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-399 |
2.87e-27 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 115.36 E-value: 2.87e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 50 AVILDWMSLIFMSFVLVISSMVLYYSSDYmnGDVNSDRFVILVTLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLVIYY 129
Cdd:PRK08375 72 ELRADSLSALFLLVTSILAIAALLYAIGY--GEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 130 QNVKSVNAGLLTALSNRIGDVFILLSISWMLNF-GSWNYIYYYDYFFNSYDYSIICFMVMFAGMTKSAQIPFSAWLPAAM 208
Cdd:PRK08375 150 GDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVtGTLNMADLAGALAENPTVVTAFGFVLLALALKAAVFPLHTWLPRAY 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 209 AAPTPVSALVHSSTLVTAGVYLLIRFS----PMLFFSKMN--SVLLLIGCLTMFMSGVAANCEFDLKKIIALSTLSQLG- 281
Cdd:PRK08375 230 PAAPPVVTALLSGLVTKVAVYALIRIYftvfGGDFRFALGlgWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGy 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 282 --LMMGILGAGYPLMSFFHLLTHALFKSLLFLCAGCYIHGlFDNQDIRYMGSLTMSMPYTSACLNVANLSLCGFPFLSGF 359
Cdd:PRK08375 310 ilLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVT-YGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGF 388
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 1824669241 360 YSKDLILeLYSFGFLNMIIFFLFFFSTGLTVMYSFRLLYY 399
Cdd:PRK08375 389 VSKWYLV-VGAVEAGQWLVLAVLLASSLLALLYFLRIWYR 427
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
8-373 |
6.72e-25 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 109.05 E-value: 6.72e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 8 SSFIFFMSGSLLFLMSLIFLYY-----DISFLVEWEICSFnssvilmAVILDWMSLIFMSFVLVISSMVLYYSSDYMNGD 82
Cdd:PRK08667 32 QSVLWLVIAIALLLFAGSLQLFtgnplDIPLWGIAPGLDI-------TFHIDRLAAFFIILIGLVSLCVAIYSLGYNEHM 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 83 VNSDRFVIL---VTLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLVIY-YQNVKSVNAGLLTALSNRIGDVFILLSISW 158
Cdd:PRK08667 105 SSNERANLLsalTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNdYQEEETQRAGIFYFVMTQLSTVFLMLGIIV 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 159 M-LNFGSWNYiYYYDYFFNSYDYSIICFMVMFAgmTKSAQIPFSAWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSP 236
Cdd:PRK08667 185 LfIQTGSFEL-SPLGASAGILSLVFLLLFLGFG--IKAGIIPFHKWLPYAHpASPSNVSALM-SGVMLKVAVYGLVRFLM 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 237 MLFFSKM--NSVLLLIGCLTMFMSGVAANCEFDLKKIIALSTLSQLGL-MMGI-------------LGAGYPLMSFFHLL 300
Cdd:PRK08667 261 DVLSPELwwGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIiLMGIglyvifgvygldtLALLALGGALFHSL 340
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1824669241 301 THALFKSLLFLCAGCYIHGLFDnQDIRYMGSLTMSMPYTSACLNVANLSLCGFPFLSGFYSKDLILELYSFGF 373
Cdd:PRK08667 341 NHALFKSLLFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFFQSF 412
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
56-314 |
3.38e-23 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 103.24 E-value: 3.38e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 56 MSLIFMSFVLVISSMVLYYSSDYMNGDVNSDRFViLVTLFVLSMMF-LIISPNLVSVLLGWDGLGLVSYCLVIYYQNVKs 134
Cdd:PRK08168 70 LGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYV-RALAGVLAAVHlLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP- 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 135 vnAGLLTA----LSNRIGDVFILLSIS-WMLNFGSWNYIYYYDYFfNSYDYS----IICFMVMFAGMTKSAQIPFSAWLP 205
Cdd:PRK08168 148 --FARLAAhkkfIADRLAELLLLAAAAlAYLEVGSLSLSALWAHL-AAQGASpslqAAALLLVLAVILKTAQLPVHGWLI 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 206 AAMAAPTPVSALVHSStLVTAGVYLLIRFSPMLFFSKM-NSVLLLIGCLTMFMSGVAANCEFDLKKIIALSTLSQLGLMM 284
Cdd:PRK08168 225 QVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPaRWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFML 303
|
250 260 270
....*....|....*....|....*....|
gi 1824669241 285 GILGAGYPLMSFFHLLTHALFKSLLFLCAG 314
Cdd:PRK08168 304 LECGLGLYELALLHLVAHSLYKAHAFLSAS 333
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-398 |
6.86e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 102.36 E-value: 6.86e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 52 ILDWMSLIFMSFVLVISSMVLYYSSDYMNGDVNSDRFVILVTLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLVIYYQN 131
Cdd:PRK12667 79 EVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRD 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 132 VK-SVNAGLLTALSNRIGDVFILLSISWM------LNFGSWNYIYYYDYFFNS------YDYSIICFMVMF--AGMTKSA 196
Cdd:PRK12667 159 RGdAVEAAIKYALIGAVGTTLYFLALAFLyatfgtLNMADLSAKIRGLSFPLTgglagnPPLALGVALALAlwAFTIKAA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 197 QIPFSAWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPMLFFSKMN---------SVLLLIGCLTMFMSGVAANCEF 266
Cdd:PRK12667 239 IFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLYTIFGISPSlidfraalsPILIILGAVSAIIGALMMVVQK 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 267 DLKKIIALSTLSQLG-LMMGI-LGAGYPLMSF-FHLLTHALFKSLLFLCAGCYIHgLFDNQDIRYMGSLTMSMPYTSACL 343
Cdd:PRK12667 318 DVKRLLAYSTISHMGyIFMGIgIGTQLGLAAAlFHIINHAIAKSLLFLASGVFIH-AAGTRDIDELAGLGRKMPIASFAF 396
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1824669241 344 NVANLSLCGFPFLSGFYSKDLILE---LYSFGFLNMIIfflfFFSTGLTVMYSFRLLY 398
Cdd:PRK12667 397 LIGALSLVGIPPLNGFFSKLLLFNallESGFYLPALVL----LIASAISLVGYFRAWY 450
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
53-441 |
7.30e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 102.10 E-value: 7.30e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 53 LDWMSLIFMSFVLVISSMVLYYSSDYMNGDVNSDRFVILVTLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLVIYYQNV 132
Cdd:PRK08376 88 VDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDT 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 133 -KSVNAGLLTALSNRIGDVFILLSISWML-NFGSWNYIYY-YDYFFNSYDYSIICFMVMFAGMT-KSAQIPFSAWLPAAM 208
Cdd:PRK08376 168 wEAIEAGIKYMFVGSLASSMVLLGIALLYgQYGTLNMAYLaVKMSENPTVVAKIALALFIAGLAmKSGAVPVHMWLPDAY 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 209 -AAPTPVSALVHSSTLvtAGVYLLIRFSPMLFFSKMNS-----VLLLIGCLTMFMSGVAANCEFDLKKIIALSTLSQLGL 282
Cdd:PRK08376 248 pAAPSSISAMLLVIKQ--AGLYALARVLFSIYGPAINLatvgwVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGY 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 283 MM-----GILGAGYPLMS----------FFHLLTHALFKSLLFLCAGCYIHGLfDNQDIRYMGSLTMSMPYTSACLNVAN 347
Cdd:PRK08376 326 MLlglgvGLAALGDPAMAsygeialaggIYHIVNHALYKALLFLTAGAVIYET-GTRNLNELGGLARTMPKTTIAFLIGA 404
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 348 LSLCGFPFLSGFYSKDLILElySFGFLNMIIFFLFFFSTGLTVMYSFRLLYYSLIKFFSFNSLSNFIIGRDMYFGMFILL 427
Cdd:PRK08376 405 AAIVGLPPFNGFASKWLIYE--SSALFNPILGVIAMIGSVLTLASFVKVFHTAFFGPPSEKVMNVKEPPKPMLVPMLILA 482
|
410
....*....|....
gi 1824669241 428 LFTIFGGsLLSWLI 441
Cdd:PRK08376 483 IAIIGMG-LFPWQI 495
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
94-366 |
2.20e-22 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 101.50 E-value: 2.20e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 94 LFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLVIYYQNVKSV-NAGLLTALSNRIGDVFILLSISWMlnfgsWNYIYYYD 172
Cdd:PRK06521 121 LFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEIrRAGFLYLLMAHAGALAILLAFGLL-----ARESGSYD 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 173 Y----------FFNSydysiICFMVMFAGM-TKSAQIPFSAWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFS----- 235
Cdd:PRK06521 196 FaamraahlspFWAS-----LVFLLALFGFgAKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVfdllg 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 236 -PMLFFSkmnSVLLLIGCLTMFMSGVAANCEFDLKKIIALSTLSQLGLMMGILGA-------GYPLMS-------FFHLL 300
Cdd:PRK06521 270 aPGWWWG---VLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLGLamvfiayGMPLLAalaltaaLYHLL 346
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1824669241 301 THALFKSLLFLCAGCYIHGLfDNQDIRYMGSLTMSMPYTSACLNVANLSLCGFPFLSGFYSKDLIL 366
Cdd:PRK06521 347 NHALFKSLLFLGAGAVLHAT-GTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLL 411
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
392-571 |
2.99e-22 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 94.15 E-value: 2.99e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 392 YSFRLLYYSLIKFFSFNSLSNFII-GRDMYFGMFILLLFTIFGGSLLSWLIFPIPACVYLPFGLSMLTVMVILGGLYFGY 470
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINEnNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 471 LLYLLDFSSVNLCNSSFSINFFSSMWFMPLISTNFTSCVGLTVGGLYSSFMDYGWLEYYGAQGVYNFFIYFIKQYLSLFD 550
Cdd:pfam06455 81 ELSNLSNKQLKKSLNFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQK 160
|
170 180
....*....|....*....|.
gi 1824669241 551 YNFKTYLMMFSLFFVFMFLYI 571
Cdd:pfam06455 161 GLIKIYLLSFLLWLLLLLLLI 181
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
53-425 |
5.40e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 96.42 E-value: 5.40e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 53 LDWMSLIFMSFVLVISSMVLYYSSDYM--NGDVNSDRFVILVTLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLVIYYQ 130
Cdd:PRK06589 81 LEPLGLIFLLLIGFLWICALLYTPKYLaiNNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTR 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 131 NVKSVNAGLlTALSNRIGDVFILLSISWMLNFGSWNYIYYYDYFFNSYDYSIICFMVMFAGMTKSAQIPFSAWLPAAMAA 210
Cdd:PRK06589 161 NNISLSGGY-KYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVA 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 211 PTPVSALVHSSTLVTAGVYLLIRFSPMLF-------FSKMNSVLLLIGCLTMFMSGVAANCEFDLKKIIALSTLSQLGLM 283
Cdd:PRK06589 240 HYPVSALLHAVIVVKTGLFCIYKILLYIFglsylqrIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLA 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 284 MG---ILGAGYPLMSFFHLLTHALFKSLLFLCAGCyIHGLFDNQDIRYMGSLTMSMPYTSACLNVANLSLCGFPFLSGFY 360
Cdd:PRK06589 320 LLsafILTPKALGAAILHLVSHSFAKICLFYSMGS-IYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFI 398
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1824669241 361 SKDLILELYSFGFLNMIIFFLFFFSTGLTVMYSFRLLYYSLIKFFSfNSLSNFIIGRDMYFGMFI 425
Cdd:PRK06589 399 SKFLILLAASEQNQPWLSIIVMLVVIASSILSALYLLKILSSIYKP-SLSENSFITKSLPYLMQI 462
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
74-398 |
2.38e-20 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 94.98 E-value: 2.38e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 74 YSSDYMNGDVNSDRFVILVTLFVLSMMFLIISPNLV--SVLLgwDGLGLVSYCLVIYYQNVKSVNAGLLTA-LSNRIGDV 150
Cdd:PRK07390 108 YALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFfsYVLL--EILTLSTYLLVGFWYAQPLVVTAARDAfLTKRVGDL 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 151 FILLSISWMLNF-GSWNYIYYYDYF----FNSYDYSIICFMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALvHSSTLVT 225
Cdd:PRK07390 186 LLLMGVVALSPLaGTLNFSDLAAWAatanLDPLTATLLGLALIAGPTGKCAQFPLHLWLDEAMEGPNPASIL-RNSVVVA 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 226 AGVYLLIRFSPMLFFSKM-NSVLLLIGCLTMFMSGVAANCEFDLKKIIALSTLSQLGLMMGILGAGYPLMSFFHLLTHAL 304
Cdd:PRK07390 265 TGAWVLIKLQPVLALSPVaLTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAI 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 305 FKSLLFLCAGCYIHGLfDNQDIRYMGSLTMSMPYTSACLNVANLSLCGFPFLSGFYS-KDLILELYSFGFLNMIIFFLFF 383
Cdd:PRK07390 345 AKALLFMSVGSIILTT-ITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWAlLRLADGLWAVSPWLVGVLLLVN 423
|
330
....*....|....*
gi 1824669241 384 FSTGLTVMYSFRLLY 398
Cdd:PRK07390 424 ALTAFNLTRVFRLVF 438
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
193-384 |
3.05e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 90.78 E-value: 3.05e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 193 TKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSKMnsVLLLIGCLTMFMSGVAANCEFDLKKII 272
Cdd:PRK07234 196 VKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDL--IVRIFGVGTALLGVLFALLEKDLKRML 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 273 ALSTLSQLGLmmgILGAgyPLMSFFHLLTHALFKSLLFLCAGCyIHGLFDNQDIRYMGSLTMSMPYTSACLNVAnlslcG 352
Cdd:PRK07234 274 AFSTISQLGF---ILAA--PLVGGLYALAHGLVKSTLFLCAGA-LPSRNFTELISQMLGIGKWIPLTMASFSIA-----G 342
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 1824669241 353 FPFLSGFYSKDLILE---------LYSFGFLNMIIFFLFFF 384
Cdd:PRK07234 343 FPLLAGFVSKVLTLKnllpwqaiaLNLAAVGTAASFWKFIF 383
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
13-398 |
1.50e-18 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 89.29 E-value: 1.50e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 13 FMSGSLLFLMSLIFlYYDISFLVEWEICSFNSSVILMAVILDWMSLIFMsfVLVISSMVLYYSSDYMNGDVNSDRFVILV 92
Cdd:PRK08668 31 GNALPLLFLIKLYF-TLKVGTGEKLTLFFGGFKLTFTLTHLSWFFAMIS--LLVIFSVAFFMVSEKTKNDAYFNMFALMS 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 93 TLFVLSMMFliiSPNLVSVLLGWDGLGLVSYcLVIYYQNVKSVNAGLLTALSNRIGDVFILLSISWMLN-FGSWNYIYYY 171
Cdd:PRK08668 108 LAGVLGVFL---ANDLLTLYIFWEIMTFSSF-MMVPMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAkTGTFDFADIS 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 172 DYFFNSYDYSIICFMVMF---AGMTKSAQIPFSAWLPAAMA-APTPVSAlVHSSTLVTAGVYLLIRFSPMLFFSKM---- 243
Cdd:PRK08668 184 QGLINDTSTGFALIVFLFllaFGVAKAGIFPLHVWAPDAYSeAPQSFSA-VLSGQLSKLGAYGFLLVLYVLPGTKLfsef 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 244 ---------NSVLLLIGCLTMFMSGVAANCEFDLKKIIALSTLSQLGLMMGILGAGYPLM---SFFHLLTHALFKSLLFL 311
Cdd:PRK08668 263 gtyrgvplfNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGfagGLFHVFNHALFKGLFFL 342
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 312 CAGCYIHGLfDNQDIRYMGSLTMSMPYTSACLNVANLSLCGFPFLSGFYSKDLILE-LYSFGFlnMIIFFLFFFSTGLTV 390
Cdd:PRK08668 343 IFAAVIYRT-GTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEaLISKGM--PITAFMAFFGSIGSF 419
|
....*...
gi 1824669241 391 MYSFRLLY 398
Cdd:PRK08668 420 LYVFRPLA 427
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
182-398 |
1.83e-15 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 79.04 E-value: 1.83e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 182 IICFMVMFAGMTKSAQI-PFSAWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLF----FSKMNSVLLLIGCLTM 255
Cdd:PRK08377 206 QVGLALLIFGLAVEAELfPLNAWAPDAyQAAPHPITVMF-SAFVVKAGLYAMARILYLMQnangWSSVLKLVIIMATLTV 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 256 FMSGVAANCEFDLKKIIALSTLSQLGLMMGILGAGYPL---MSFFHLLTHALFKSLLFLCAGCYIHGLFDNQdIRYMGSL 332
Cdd:PRK08377 285 FFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAgvdAGVFHMINHAIVKALLFLAVGYVGITLGGTE-IEKFEGL 363
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1824669241 333 TMSMPYTSACLNVANLSLCGFPFLSGFYSK-DLILELYSFGFLNMIIffLFFFSTGLTVMYSFRLLY 398
Cdd:PRK08377 364 GKRMPLTALALTIGALSTVGIPLFNVFWSKfRIILAGLSAGYTWPVA--LVLGASVVEAVYYFRLIH 428
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
50-441 |
1.91e-15 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 79.00 E-value: 1.91e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 50 AVILDWMSLIFMSFVLVISSMVLYYSSDYMNG-DVNSDRFVILVTLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLV-I 127
Cdd:COG1007 65 MFVVDGFALFFKLLILLAALLVLLLSRDYLERrGLLRGEFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVaF 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 128 YYQNVKSVNAGL----LTALSNrigdVFILLSISWMLNF-GSWNYIYYYDYFFNSYDYS---IICFMVMFAGMT-KSAQI 198
Cdd:COG1007 145 RRDDRRSSEAALkyflLGALSS----GFLLYGISLLYGAtGSLNLAGIAAALAAGGANSpllLLGLVLVLAGLAfKLSAV 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 199 PFSAWLP-AAMAAPTPVSALVhsSTLV-TAGVYLLIRFSPMLFFS---KMNSVLLLIGCLTMFMSGVAANCEFDLKKIIA 273
Cdd:COG1007 221 PFHMWTPdVYEGAPTPVTAFL--ATAPkIAAFAALLRLLVEAFPGlaaDWQLLLAVLAVLSMTVGNLAALAQTNVKRMLA 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 274 LSTLSQLG-LMMGILGAGYPLMS--FFHLLTHALFKSLLFLCAGCYIHGLFDNQDIRYMGSLTMSMPYTSACLNVANLSL 350
Cdd:COG1007 299 YSSIAHAGyLLLGLAAGTPLGVSaaLFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSL 378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 351 CGFPFLSGFYSKDLILE-LYSFGFLNMIIFFLFFfsTGLTVMYSFRLLYYSLIKffSFNSLSNFIIGRDMYFGMFILLLF 429
Cdd:COG1007 379 AGIPPTAGFFGKFYVFSaAVEAGLYWLAVIAVLN--SVISAYYYLRVVKAMYFD--EPEEEAPISAPPGLRVALVIAALL 454
|
410
....*....|..
gi 1824669241 430 TIFGGSLLSWLI 441
Cdd:COG1007 455 VLLLGIFPGPLL 466
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
53-314 |
2.96e-15 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 78.54 E-value: 2.96e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 53 LDWMSLIFMSFVLVISSMVLYYSSDYMNGDVNSDRFVILVTL--FVLSMMFLiiSPNLVSVLLGWdGLGLVSYCLVIYYQ 130
Cdd:PRK08601 70 LDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFttGFASLAWL--SGDLRLMALCW-GATLLGLTLLIGLN 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 131 NVKSV--NAGLLTALSNRIGDVFILLSISWM-LNFGSWNYIYYYDY----FFNSYDYSIICFMVMFAGMTKSAQIPFSAW 203
Cdd:PRK08601 147 KGWKVarEAAKISGMLFLISWLALALAIVWLfIATGEWQLTSVLSNenlaQLGTWEKTGINLLLILAVMIPAAQWPFQRW 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 204 LPAAMAAPTPVSALVHSStLVTAGVYLLIRFSPMLFFSKMNSVLLLIGCLTMFMSGVAANCEFDLKKIIALSTLSQLGLM 283
Cdd:PRK08601 227 LIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFHDDIAQILLLIFASISVLIGTGISLVQVDYKRQLVGSTMAQMGFM 305
|
250 260 270
....*....|....*....|....*....|.
gi 1824669241 284 MGILGAGYPLMSFFHLLTHALFKSLLFLCAG 314
Cdd:PRK08601 306 LVQCALGAYSAAIIHLILHGLFKATLFLQSG 336
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
108-458 |
5.11e-14 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 74.93 E-value: 5.11e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 108 LVSVLLGWDGLGLVSYCLVIYYQNVKSVNAGLLTALSNRIGDVFILLSISW-MLNFGSWNYIYyydyfFNSYDySIICFM 186
Cdd:PRK12668 115 LLTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLhYAETGSFAFGA-----IAGLG-GTAAWL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 187 VMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMlffskmNSVLLLIGCLTMFMSGVAANCEF 266
Cdd:PRK12668 189 ILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPG------TELLIYIGAAMAVYGVFFALLEN 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 267 DLKKIIALSTLSQLGLMMGILGAGYPLM---SFFHLLTHALFKSLLFLCAGCYIHGLFDNqDIRYMGSLTMSMPYTSACL 343
Cdd:PRK12668 263 DLRRLLSYHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLYRTGTE-KLTELGGLYRSMPLTALFC 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 344 NVANLSLCGFPFLSGFYSKDLILELYSFGFLNMIIFFLFFFSTGLTVMYSFRLLYYSlikFFSFNS-LSNFIIGRDMYFG 422
Cdd:PRK12668 342 LVGALSISAFPLFSGFVSKSMIISAAGEDHYVWVWLLLLLASAGTFLHFGIKLPYFA---FFGGDSgLRVKDAPRNMLVA 418
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 1824669241 423 MFIL----LLFTIFGGSLLSWLIFPIPacvYLPFGLSMLT 458
Cdd:PRK12668 419 MGIAaflcIAIGVYPQALYALLPYPVD---YEPYTASHVL 455
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
147-397 |
4.34e-13 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 71.65 E-value: 4.34e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 147 IGDVFILLSISWMlnfgswnYIYYYDYFFN---------SYDYSIICFMVMFAG-MTKSAQIPFSAWLP-AAMAAPTPVS 215
Cdd:COG1008 172 AGSLLMLVAILAL-------YFLAGALTFDiaelaaaplPLTAQLLLFLAFFIAfAVKVPMFPFHTWLPdAHVEAPTAGS 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 216 ALvHSSTLVTAGVYLLIRFSPMLF---FSKMNSVLLLIGCLTMFMSGVAANCEFDLKKIIALSTLSQLGLMMGILGAGYP 292
Cdd:COG1008 245 VL-LAGVLLKMGGYGLLRFALPLFpeaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFALNP 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 293 LM---SFFHLLTHALFKSLLFLCAGcYIHGLFDNQDIRYMGSLTMSMPYTSACLNVANLSLCGFPFLSGFYSKDLILeLY 369
Cdd:COG1008 324 LGlqgAVLQMVSHGLITAALFLLVG-VLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVL-LG 401
|
250 260
....*....|....*....|....*...
gi 1824669241 370 SFGFlNMIIFFLFFFSTGLTVMYSFRLL 397
Cdd:COG1008 402 AFQV-NPWLAILAALGLILTAAYLLWMY 428
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
183-366 |
2.74e-12 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 69.21 E-value: 2.74e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 183 ICFMVMFAGmtKSAQIPFSaWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFF---SKMNSVLLLIGCLTMFMSG 259
Cdd:PRK12663 211 LLFLLAFGM--KAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPqerELLHPLLATMAAITMVIGA 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 260 VAANCEFDLKKIIALSTLSQLGLMMGILGAGYPLM---SFFHLLTHALFKSLLFLCAGCYIhGLFDNQDIRYMGSLTMSM 336
Cdd:PRK12663 288 LGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLV-RLTGYRSLQYLGGLYRKE 366
|
170 180 190
....*....|....*....|....*....|
gi 1824669241 337 PYTSACLNVANLSLCGFPFLSGFYSKDLIL 366
Cdd:PRK12663 367 PLFGALFLILIFAIGGLPPFSGFWGKVLLV 396
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
198-359 |
9.92e-12 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 67.54 E-value: 9.92e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 198 IPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYllirfsPMLFFSKMNS--------VLLLIGCLTMFMSGVAANCEFDL 268
Cdd:PRK08042 197 IPLHGWVPQAHAnASAPAAALF-STVVMKIGLL------GILTLSLLGGnaplwwgvALLVLGMITAFVGGLYALMEHNI 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 269 KKIIALSTLSQLGLMMGILGAGYPLMS--------------FFHLLTHALFKSLLFLCAGCYIHGLfDNQDIRYMGSLTM 334
Cdd:PRK08042 270 QRLLAYHTLENIGIILLGLGAGVTGIAleqpalialglvggLYHLLNHSLFKSVLFLGAGSVWFRT-GHRDIEKLGGIGK 348
|
170 180
....*....|....*....|....*
gi 1824669241 335 SMPYTSACLNVANLSLCGFPFLSGF 359
Cdd:PRK08042 349 KMPVISIAMLVGLMAMAALPPLNGF 373
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
183-393 |
1.23e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 66.90 E-value: 1.23e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 183 ICFMVMFAgmTKSAQIPFSAWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLFFSKMN---SVLLLIGCLTMFMS 258
Cdd:PRK07691 213 ILFLFVFA--TKAGLFPLYFWLPGSyYAPPIAIAALF-GALLTKVGVYAIARTFTLFFSHDTSfthYLILILALLTIIFG 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 259 GVAANCEFDLKKIIALSTLSQLGLMMGILGAGYPLM---SFFHLLTHALFKSLLFLCAGCYIHgLFDNQDIRYMGSLTMS 335
Cdd:PRK07691 290 VIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKR 368
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1824669241 336 MPYTSACLNVANLSLCGFPFLSGFYSKDLILElYSFGFLNMIIFFLFFFStGLTVMYS 393
Cdd:PRK07691 369 YPVLGWMFFIAALSLAGIPPLSGFYGKFFIVE-GTFEAGFYVSGIIVLLS-SLLVLYS 424
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
183-366 |
6.49e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 64.78 E-value: 6.49e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 183 ICFMVMFAGM-TKSAQIPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPML----FFSKMNSVLLLIGCLTMF 256
Cdd:PRK08676 207 ASFLFIFIGFlAKSGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSALLrqsgAAEQFSNVLIGLGIFSIA 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 257 MSGVAANCEFDLKKIIALSTLSQLGLMMGILGAGYPLMSF---FHLLTHALFKSLLFLCAGCyIHGLFDNQDIRYMGSLT 333
Cdd:PRK08676 286 VAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAGI-LHRQYRSDRFDRIFDVF 364
|
170 180 190
....*....|....*....|....*....|...
gi 1824669241 334 MSMPYTSACLNVANLSLCGFPFLSGFYSKDLIL 366
Cdd:PRK08676 365 RLQPVAAWGVILGSAAIIGMPPFPLFLSKFFIL 397
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
186-367 |
1.46e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 63.83 E-value: 1.46e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 186 MVMFAGMTKSAQIPFSAWLPAAM-AAPTPVSAlVHSSTLVTAGVYLLIRFSPMLFFS-KMNSVLLLIGCLTMFMSGVAAN 263
Cdd:PRK12665 214 VLLVAFGIKAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGgGLDTLLMVVALLTMVVGILGAI 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 264 CEFDLKKIIALSTLSQLGLMMGILGAGYPL-MS--FFHLLTHALFKSLLFLCAgcyihGLFDNQD----IRYMGSLTMSM 336
Cdd:PRK12665 293 AQSDIKRLLSFTLVSHIGYMVFGIALSTVAgLSgaIYYVAHHITVQTTLFLVV-----GLIERQAgsssLRRLGGLAKAS 367
|
170 180 190
....*....|....*....|....*....|.
gi 1824669241 337 PYTSACLNVANLSLCGFPFLSGFYSKDLILE 367
Cdd:PRK12665 368 PLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
50-362 |
2.93e-10 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 62.53 E-value: 2.93e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 50 AVILDWMSLIFMSFVLVISSMVLYYSSDYMNGDVNSDrFVILVTLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLVIY- 128
Cdd:PRK05777 68 MLVVDGFALFLKGLILLASLLALLLARPYLEDRGRGE-FYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALr 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 129 YQNVKSVNAGL----LTALSNrigdVFILLSISWMLNF-GSWNYIYYYDYFFNSYDYS---IICFMVMFAGMT-KSAQIP 199
Cdd:PRK05777 147 RDRRRSLEAAIkyfvLGALAS----GFLLYGMSLLYGAtGSLSFAGIAKALADGSGNSlllLFGLVFLLVGLAfKLSAVP 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 200 FSAWLPAAM-AAPTPVSALVHSSTLVtAGVYLLIRFSPMLFFS---KMNSVLLLIGCLTMFMSGVAANCEFDLKKIIALS 275
Cdd:PRK05777 223 FHMWTPDVYeGAPTPVTAFLATAPKI-AAFAVLLRLLVVAFGGlseDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYS 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 276 TLSQLG-LMMGILGAGYPLMS--FFHLLTHALFKSLLFLCAGCYIHGLFDNQDIRYMGSLTMSMPYTSACLNVANLSLCG 352
Cdd:PRK05777 302 SIAHAGyLLVGLAAGTAEGYSavLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAG 381
|
330
....*....|
gi 1824669241 353 FPFLSGFYSK 362
Cdd:PRK05777 382 IPPTAGFWGK 391
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
193-366 |
2.28e-09 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 59.94 E-value: 2.28e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 193 TKSAQIPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLFFSKMN----SVLLLIGCLTMFMSGVAANCEFD 267
Cdd:PRK06458 226 TKVGLFPMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYYILIDAAIGSdfpgRLLLIFGLLSVLVAAFFLLRQRD 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 268 LKKIIALSTLSQLGLMMGILGAGYPLMSF---FHLLTHALFKSLLFlCAGCYIHGLFDNQDIRYMGSLTMSMPYTSACLN 344
Cdd:PRK06458 305 IKRLFAYSSIEHMGLIAFALGIGGPLGIFaalLHMLNHSLTKSAIF-FASGNVLQKYGTRDINVIRGLLKVSPLTGWGLM 383
|
170 180
....*....|....*....|..
gi 1824669241 345 VANLSLCGFPFLSGFYSKDLIL 366
Cdd:PRK06458 384 LGALAIAGMPPFGVFISEFLIL 405
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-445 |
1.22e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 57.44 E-value: 1.22e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 52 ILDWMSLIFMSFVLVISSMVLYYSSDYMNGDVNSDRFVILVTLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLVIYYQN 131
Cdd:PRK12662 76 ILSATMLVLVNFIAVMSVLYGIYPNRKEISVNKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRD 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 132 VKSVNAGLLTALSNRIGDVFILLSISWMLNF-GSWNYIYYYDYFFNSYDYSII---CFMVMFAGMTKSAQIPFSAWLPAA 207
Cdd:PRK12662 156 KKALVAAFEYLIIGTIGATFYLIGIGFLYAItGTLNMGDMFLIIQDLPTNRAIqigVLFIMVGLFIKAALFPFHKWLIQA 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 208 MAAPTPVSALVHSSTLVTAGVYLLIR-----FSPMLFFSKM--NSVLLLIGCLTMFMSGVAANCEFDLKKIIALSTLSQL 280
Cdd:PRK12662 236 YSEAPSFISVFFSGTSTKVMIYLIIRivydvFKANFVFTTLpfNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHI 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 281 G---LMMGILGAGYPLMSFFHLLTHALFKSLLFLCAGCYIHGlFDNQDIRYMGSLTMSMPYTSACLNVANLSLCGFPFLS 357
Cdd:PRK12662 316 GyiiLAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYH-FGTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTS 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 358 GFYSKDLILELY--SFGFLNMIIFFLfffSTGLTVMYSFRL---LYYSLIKFFSFNSLSNFIIGRDMYFGMFILLLFTIF 432
Cdd:PRK12662 395 GFVAKWYILDAFikSNAWIGLVVLLV---GSGLSVIYVWKIveaLYFESRMVESKANDKAFKTPNAMVLCIWIMAILSII 471
|
410
....*....|...
gi 1824669241 433 GGsllswlIFPIP 445
Cdd:PRK12662 472 VG------IYPIP 478
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
148-397 |
1.68e-08 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 57.26 E-value: 1.68e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 148 GDVFILLSISWM--LNFGSWNYIYYYDYFFNSYDYSIICFMVMFAGMTKSAQIPFSAWLPAAMA-APTPVSALVhSSTLV 224
Cdd:TIGR01972 168 GSLLMLLAILGLyfLGGGTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVeAPTAGSVIL-AGVLL 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 225 TAGVYLLIRFSPMLFFSKMNS---VLLLIGCLTMFMSGVAANCEFDLKKIIALSTLSQLGLMM---------GILGAgyp 292
Cdd:TIGR01972 247 KMGTYGFLRFNLPLFPDASLYfapVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLlgifsfnelGISGA--- 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 293 lmsFFHLLTHALFKSLLFLCAGcYIHGLFDNQDIRYMGSLTMSMPYTSACLNVANLSLCGFPFLSGFYSKDLILeLYSFG 372
Cdd:TIGR01972 324 ---VFQMISHGLITAALFLLVG-VLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLIL-LGSFK 398
|
250 260
....*....|....*....|....*
gi 1824669241 373 FlNMIIFFLFFFSTGLTVMYSFRLL 397
Cdd:TIGR01972 399 V-NPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
54-371 |
3.67e-08 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 56.17 E-value: 3.67e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 54 DWMSLIFMSFVLVISSMVLYYSSDYM-NGDVNSDRFVILVTLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLVIYY-QN 131
Cdd:CHL00049 78 NNFNEIFQFLILLCSTLCIPLSVEYIeCTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTkKD 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 132 VKSVNAGLLTALSNRIGDVFILLSISWM-------LNFGSWNYIYYYDYFFNSYDYSIICFMVMFAGMTKSAQIPFSAWL 204
Cdd:CHL00049 158 VRSNEATMKYLLMGGASSSILVYGFSWLyglsggeIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWT 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 205 PAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPMLFFSKMN---SVLLLIGCLTMFMSGVAANCEFDLKKIIALSTLSQL 280
Cdd:CHL00049 238 PDVYeGSPTPVVAFL-SVTSKVAASALATRIFDIPFYFSSNewhLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQI 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 281 G-LMMGILgAGYPLMSFFHLLTHALFKSLLFLCA-GCYI-HGLFDNQD-IRYMGSLTMSMPYTSACLNVANLSLCGFPFL 356
Cdd:CHL00049 317 GyVIIGII-VGDSNDGYASMITYMLFYIFMNLGTfACIVlFGLRTGTDnIRDYAGLYTKDPFLALSLALCLLSLGGIPPL 395
|
330
....*....|....*
gi 1824669241 357 SGFYSKdlileLYSF 371
Cdd:CHL00049 396 AGFFGK-----LYLF 405
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
60-410 |
2.84e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 53.26 E-value: 2.84e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 60 FMSFVLVISSMVLYYSSDYMNGDVNSDRFV-ILVTLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLVIYYQNVKSVNAG 138
Cdd:PRK06459 45 VLSFFSIISTIVWILASLYSIEYDHYGKWLsSLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKKNKRPAFV 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 139 LLTalsnrigdvFILLSISWMLNFGSWNYIYYYDYFFNSYDYSIICFMVMFAGMTKSAQIPF--SAWLPAAMAAPTPVSA 216
Cdd:PRK06459 125 FMA---------FGELSTVLILAGFAWAFIISGTTNFSYLPSPVPLILASFGFIIKMGMMPFlvSEWLPIAHGNAPSNFS 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 217 LVHSSTLVTAGVYLLIR---FSPMLFFSKMNSVLLLIGCLTMFMSGVAANCEFDLKKIIALSTLSQLGLMMGILGA---- 289
Cdd:PRK06459 196 AILSATMTLMGVYGILKmtiLTQTIPIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLymvt 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 290 --------GYPLMS-FFHLLTHALFKSLLFLCAgcyihGLFDNQDIRYMGSLTMSMPYTSACLnvANLSLCGFPFLSGFY 360
Cdd:PRK06459 276 kqlitsieHFSLITvILYSFAHSVAKTGLFLSS-----GLQEKQSITYSKKIRNRWIELGLTL--LASSLSGLLPNIGGV 348
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 1824669241 361 SKDLILE-LYSFGFLNMIIFFLFFFSTGLTVMYSFRLLYYSLIKFFSFNSL 410
Cdd:PRK06459 349 ASWLLLEsLFMFAYVLHNVISILFIVTGAIIAMGEGLATALLIKYITYTSL 399
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
222-367 |
5.70e-07 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 52.34 E-value: 5.70e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 222 TLVTAGVYLLIRFSPMLFFSKMNSVLLLIGCLTMFMSGVAANCEFDLKKIIALSTLSQLGLMMGILGAGYPL---MSFFH 298
Cdd:PRK06277 244 VLVALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLgivAGIFH 323
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1824669241 299 LLTHALFKSLLFLCAGCyIHGLFDNQDIRYMGSLTMSMPYTSACLNVANLSLCGFPFLSGFYSKDLILE 367
Cdd:PRK06277 324 AINHVIYKSALFLGAGI-VSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQ 391
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
143-366 |
2.63e-06 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 50.20 E-value: 2.63e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 143 LSNRIGDVFILLSISWM-----LNFGSWNYIYYYDYFFNSYDYSIICFMVMFAGMTKSAQIPFSAWLPAAMA-APTPVSA 216
Cdd:PRK05846 168 LYTLLGSLLMLVAIIYLvvvyyNATGTFDIADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAHVqAPTAGSV 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 217 LvHSSTLVTAGVYLLIRFSPMLF------FSKMNSVLLLIGcltMFMSGVAANCEFDLKKIIALSTLSQLGLMMGILGAG 290
Cdd:PRK05846 248 L-LAGILLKMGAYGLLRFSLPLFpdasheFAPIIITLGVIA---IIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFAG 323
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1824669241 291 YPLM---SFFHLLTHALFKSLLFLCAGcYIHGLFDNQDIRYMGSLTMSMPYTSACLNVANLSLCGFPFLSGFYSKDLIL 366
Cdd:PRK05846 324 NQLGiqgAIFQMISHGLSSAALFLLVG-VLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLIL 401
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
198-367 |
2.02e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 47.40 E-value: 2.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 198 IPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLF---FSKMNSVLLLIGCLTMFMSGVAANCEFDLKKIIAL 274
Cdd:PRK07363 222 VPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFpqtWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAY 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 275 STLSQLGLMMGILGAGYPLM---SFFHLLTHALFKSLLFLCAGCyIHGLFDNQDIRYMGSLtMS----MPYTSACLNVAN 347
Cdd:PRK07363 302 SSIGHMGYILVAAAAGTQLSllgAVAQMISHGLILALLFHLVGI-VERKVGTRDLDVLNGL-MNpirgLPLTSALLVLAG 379
|
170 180
....*....|....*....|
gi 1824669241 348 LSLCGFPFLSGFYSKDLILE 367
Cdd:PRK07363 380 MASAGIPGLVGFVAEFIVFQ 399
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
194-449 |
3.57e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 46.59 E-value: 3.57e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 194 KSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSK---MNSVLLLIGCLTMFMSGVAANCEFDLKK 270
Cdd:MTH00204 222 KIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAAseyFAPLIVMLSVIAVIYGSLTTCRQVDFKR 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 271 IIALSTLSQLGL---------MMGILGAgyplmsFFHLLTHALFKSLLFLcAGCYIHGLFDNQDIRYMGSLTMSMPYTSA 341
Cdd:MTH00204 302 LIAYSSVAHMGLvplglfthtIEGLVAA------VFLMLAHGFVSSALFI-AVTFLYERHHTRLIKYYRGLTLTMPLFVI 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 342 CLNVANLSLCGFPFlsgfySKDLILELYSfgflnmiIFFLFFFSTGLTVMYSFRLLY---YSLIKF--FSFNSLSNFI-- 414
Cdd:MTH00204 375 IMLVLSLANMGFPL-----SCNFVGEFFS-------LLAAFEYSLGLGVLVTSGMVWsaaYSLYLYnrISFGGGSNYLlf 442
|
250 260 270
....*....|....*....|....*....|....*...
gi 1824669241 415 ---IGRDMYFGMFILLLFTIFGGSLLSWLIFPIPACVY 449
Cdd:MTH00204 443 srdLNRRELLAILPLIIAIFLLGIVPFIIIDLVKNSLV 480
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
89-449 |
3.07e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 43.57 E-value: 3.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 89 VILVTLFVLSMMFLIISPNLVSVLLGWDGLGLVSYCLVIYYQNVKSVNAGLLTALSNRIGDVFILLSISwmLNFGSWNYI 168
Cdd:PRK12664 66 MLCYLLYYISSIAAISSSSLTLVVIGFEFMALSALMIIAAGCPGGNIGAFIHYACVHFFSGVLLLVGAS--GQAQNGQYT 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 169 YYYDYFFnsydysiicfmvMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSstLVTAGVYLLIrfspMLFFSKMNSVLL 248
Cdd:PRK12664 144 GYCKLLF------------MLGLLINCACFPASSWVVDAYPAASNFGIIVLS--LFTTKVAALV----LLLFFSGEEILL 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 249 LIGCLTMFMSGVAANCEFDLKKIIALSTLSQLGLMMGILGAGYPL-----MSFFHLLTHALFKSLLFLCAGCYIHGLfDN 323
Cdd:PRK12664 206 FLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSgvaigILILQIVLSVVYQTLLFMVADSVINRT-RK 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 324 QDIRYMGSLtMSMPYTSACLNVANLSLCGFPFLSGFYSKDLIL-ELYSFGFLNMIIFFLF-FFSTGLTVMYSFRLLYYSL 401
Cdd:PRK12664 285 FNLNRVGGL-FKMSLEAMCCIIAILNMGAFPGTAGFVSKSLIThSIDTAGLTLVLYKKLFlICSLLLFASVGLKFFWYAF 363
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 1824669241 402 IKFFSFNSLSNFIIGRDMYFGMFILLLFTIFGGSLLSWLIFPIPACVY 449
Cdd:PRK12664 364 ISKSKSKPEAEKVYIGSKLSMIILVLICVVLGMFNSYLLFYNLPSFVY 411
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
185-379 |
4.75e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 43.10 E-value: 4.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 185 FMVMFAgmTKSAQIPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLF---FSKMNSVLLLIGCLTMFMSGV 260
Cdd:PRK12561 191 FLIAFG--VKLPIFPLHTWLPDAHGeASAPVSMIL-AGVLLKMGGYALIRFNVQMLpdaHVYFAPALAILGVVNIIYGAL 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 261 AANCEFDLKKIIALSTLSQLGLMM---------GILGAgyplmsFFHLLTHALFKSLLFLCAGCY---IHGLfdnqDIRY 328
Cdd:PRK12561 268 NAFAQDNVKRRLAYSSVSHMGFVLlgiaaftdlGISGA------MLQMISHGLIAAALFFLTGVTyerTHTL----SIPN 337
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 1824669241 329 MGSLTMSMPYTSACLNVANLSLCGFPFLSGFYSKDLIL------ELYSFGFLNMIIF 379
Cdd:PRK12561 338 MGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVFlgitssDVYSSTFRTITIL 394
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
198-365 |
6.56e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 42.38 E-value: 6.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 198 IPFSAWLP-AAMAAPTPVSALVhSSTLVTAGVYLLIRFSPMLFFSKMNSV---LLLIGCLTMFMSGVAANCEFDLKKIIA 273
Cdd:PRK06473 222 VPFHTWLPdAHVEASTPVSVLL-AGVLLKLGTYGLLRFGVGLFPEAWVYLapwLATWAVVSVLYGASCAIAQKDMKKMVA 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 274 LSTLSQLGLMMGILGAGYPLM---SFFHLLTHALFKSLLFLCAGCyIHGLFDNQDIRYMGSL---TMSMPYTSACLNVAN 347
Cdd:PRK06473 301 YSSIGHMGYILLAAAAATPLSilaAVFQMISHGLISALLFLLVGV-VYKKTGSRDVDVLRGLlnpERGLPITGSLMILGV 379
|
170
....*....|....*...
gi 1824669241 348 LSLCGFPFLSGFYSKDLI 365
Cdd:PRK06473 380 MASAGIPGMVGFIAEFLV 397
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
147-359 |
6.71e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 42.35 E-value: 6.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 147 IGDVFILLSISWMLNF-GSWNYIYYYDYFFNSYDYSIICFMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVT 225
Cdd:MTH00217 171 IGSVFMLLGIFTLYSYaGTTDYQALCCLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLK 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 226 AGVYLLIRFSPMLF--FSKMNSVLLLIGCLTMFMSGVAANC-EFDLKKIIALSTLSQLGL---------MMGILGAgypl 293
Cdd:MTH00217 251 LGGYGFIRFSWPLLpeASEYFSPLIQTLSLLAIIYGSLTTCrQVDLKRIIAYSSVAHMGLvtlgifshtIQGLVAA---- 326
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1824669241 294 msFFHLLTHALFKSLLFLcAGCYIHGLFDNQDIRYMGSLTMSMPYTSACLNVANLSLCGFPFLSGF 359
Cdd:MTH00217 327 --IFLMLAHGLVSSALFI-AVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNF 389
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
194-362 |
4.09e-03 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 40.03 E-value: 4.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 194 KSAQIPFSAWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPMLFFS---KMNSVLLLIGCLTMFMSGVAANCEFDLK 269
Cdd:PRK02504 223 KISAVPFHQWTPDVYeGSPTPVVAFL-SVGSKAAGFALAIRLLVTAFPSfdeQWKLLFTALAILSMVLGNVVALAQTSMK 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 270 KIIALSTLSQLG-LMMGILG---AGYPLMsFFHLLTHaLFKSL-LFLCAGCYIHGLFDNQDIRYMGsLTMSMPYTSACLN 344
Cdd:PRK02504 302 RMLAYSSIGQAGfVMIGLVAgteAGYASM-VFYLLAY-LFMNLgAFACVILFSLRTGTDQISDYAG-LYQKDPLLTLGLS 378
|
170
....*....|....*...
gi 1824669241 345 VANLSLCGFPFLSGFYSK 362
Cdd:PRK02504 379 LCLLSLGGIPPLAGFFGK 396
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
41-88 |
4.16e-03 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 35.48 E-value: 4.16e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 1824669241 41 SFNSSVILMAVILDWMSLIFMSFVLVISSMVLYYSSDYMNGDVNSDRF 88
Cdd:pfam00662 3 SVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
185-394 |
5.38e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 39.52 E-value: 5.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 185 FMVMFAGMTKSAQI-PFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFS-PMLFFSKMN--SVLLLIGCLTMFMSGV 260
Cdd:MTH00226 233 FLGIFLAMAVKIPIfPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSwPILPLGAQNlaPAVIAMGIVGIVYGSF 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669241 261 AANCEFDLKKIIALSTLSQLGL---------MMGILGagyplmSFFHLLTHALFKSLLFLCAgCYIHGLFDNQDIRYMGS 331
Cdd:MTH00226 313 ATCRQIDVKRLVAYSSVAHMGLvsitlvthdIIGLTG------SIFIMLAHGIVSSLLFILV-TILYDRHHTRLIKYYRG 385
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1824669241 332 LTMSMPYTSACLNVANLSLCGFPFLSGFYSKDLILeLYSFGFlNMIIFFLFFFSTGLTVMYSF 394
Cdd:MTH00226 386 LSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSI-LSSFNW-NPIIGVFVCSGVILSAVYSF 446
|
|
| |
