|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-441 |
1.83e-140 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 409.16 E-value: 1.83e-140
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 1 MLMFIFSLLFMIPLALL-NSWWLVQFWFFFLSFIFVFFGDFSFFIINAGFGMGLDFFSWLMILLSFWICSLMIMSSQSIK 79
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLkNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 80 SLCYFSDLYMLVVLLLMLSLYISFSVTNLFNFYLFFEFSLVPTLMLILGWGYQPERVSASMYLIFYTVAASLPLLSCILW 159
Cdd:MTH00163 81 KKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 160 IEGQVGGLFYYLLFDLCN-SFYFYLAMILAFLVKLPMYMFHLWLPKAHVEAPISGSMVLAGILLKLGGYGLIRVFKCMVF 238
Cdd:MTH00163 161 LYNNSGSLSFFLLNFFGSlNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 239 FSLNFNFYVVLFSLYGGLMVSLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNIWGYYGSIIMMLGHGLCSSGLFCLSNI 318
Cdd:MTH00163 241 LGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 319 SYERLGSRLFLLNKGMISYMPSMSLWWFMLSACNMSAPPSLNLIGEISLLNGLISYSWYTMFFLFFLSFFSCAYSLFLYS 398
Cdd:MTH00163 321 IYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYS 400
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 1824669242 399 YSQHGNFYSGLYSVSSCYLIEFHLIFLHWFPLNIMFMCCDYYM 441
Cdd:MTH00163 401 YSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFM 443
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
51-441 |
1.38e-121 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 359.92 E-value: 1.38e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 51 MGLDFFSWLMILLSFWICSLMIMSSQSIKSLCYFSDLYMLVVLLLMLSLYISFSVTNLFNFYLFFEFSLVPTLMLILGWG 130
Cdd:MTH00150 20 FSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLLLILGWG 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 131 YQPERVSASMYLIFYTVAASLPLLSCILWIEGQVGGLFYYLLFDLCNSF----YFYLAMILAFLVKLPMYMFHLWLPKAH 206
Cdd:MTH00150 100 YQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLssmgLWGLLVFLAFLVKLPMYPFHLWLPKAH 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 207 VEAPISGSMVLAGILLKLGGYGLIRVFKCMVFFSLNFNFYVVLFSLYGGLMVSLICLRQLDLKMLIAYSSVSHMSLVISG 286
Cdd:MTH00150 180 VEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSLVLAG 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 287 LFSMNIWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFLLNKGMISYMPSMSLWWFMLSACNMSAPPSLNLIGEIS 366
Cdd:MTH00150 260 VLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNLLSEIM 339
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1824669242 367 LLNGLISYSWYTMFFLFFLSFFSCAYSLFLYSYSQHGNFYSGLYSVSSCYLIEFHLIFLHWFPLNIMFMCCDYYM 441
Cdd:MTH00150 340 IFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILKSDLLF 414
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
1-435 |
1.99e-108 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 327.71 E-value: 1.99e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 1 MLMFIFSLLFMIPLALLNSWW--LVQFWFFFLSFIFVFFGDFSFFIINAGFGMGLDFFSWLMILLSFWICSLMIMSSQSI 78
Cdd:MTH00205 1 MSIFGVFSLLIILFVLKFKDWsfFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 79 KSLCYFSDLYMLVVLLLMLSLYISFSVTNLFNFYLFFEFSLVPTLMLILGWGYQPERVSASMYLIFYTVAASLPLLSCIL 158
Cdd:MTH00205 81 FKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 159 WIEGQVGGLFYYLLFDLCNS----FYFYLAMILAFLVKLPMYMFHLWLPKAHVEAPISGSMVLAGILLKLGGYGLIRVFK 234
Cdd:MTH00205 161 FLNSLNFSLSMFFNFPLNFSdfylFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 235 CMVFFSLNFNFYVVLFSLYGGLMVSLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNIWGYYGSIIMMLGHGLCSSGLFC 314
Cdd:MTH00205 241 MLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 315 LSNISYERLGSRLFLLNKGMISYMPSMSLWWFMLSACNMSAPPSLNLIGEISLLNGLISYSWYTMFFLFFLSFFSCAYSL 394
Cdd:MTH00205 321 LANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSL 400
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 1824669242 395 FLYSYSQHGNFYSGLYSVSSCYLIEFHLIFLHWFPLNIMFM 435
Cdd:MTH00205 401 YLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILIL 441
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-438 |
2.78e-104 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 317.07 E-value: 2.78e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 1 MLMFIFSLLFMIPLALLNSWWLVQFWFFFLSFIFVFFGDFSFF----IINAGFGMGLDFFSWLMILLSFWICSLMIMSSQ 76
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPWSWALTFSTLLLLSLFTLLNLYPmsapYSMFTESLSSDMLSAPLITLTLWITALMILASF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 77 SIKSLCYFSDLYMLVVLLLMLSLYISFSVTNLFNFYLFFEFSLVPTLMLILGWGYQPERVSASMYLIFYTVAASLPLLSC 156
Cdd:MTH00014 81 KIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 157 ILWIEGQVGGLFYYLLFDLCNSFYFY----LAMILAFLVKLPMYMFHLWLPKAHVEAPISGSMVLAGILLKLGGYGLIRV 232
Cdd:MTH00014 161 ILLIFYTNNSLSMLMSSMEPPSIYLMnlwwLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 233 FKCMVFFSLNFNFYVVLFSLYGGLMVSLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNIWGYYGSIIMMLGHGLCSSGL 312
Cdd:MTH00014 241 SSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSAL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 313 FCLSNISYERLGSRLFLLNKGMISYMPSMSLWWFMLSACNMSAPPSLNLIGEISLLNGLISYSWYTMFFLFFLSFFSCAY 392
Cdd:MTH00014 321 FALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAY 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 1824669242 393 SLFLYSYSQHGNFYSGLYSVSSCYLIEFHLIFLHWFPLNIMFMCCD 438
Cdd:MTH00014 401 SLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPD 446
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
51-403 |
1.35e-98 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 302.50 E-value: 1.35e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 51 MGLDFFSWLMILLSFWICSLMIMSSQS--IKSLCYFSDLYMLVVLLLMLSLYISFSVTNLFNFYLFFEFSLVPTLMLILG 128
Cdd:MTH00124 56 LGIDQISAPLLVLSCWLLPLMILASQNhlQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITR 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 129 WGYQPERVSASMYLIFYTVAASLPLLSCILWIEGQVGGLFYYLLF----DLCNSFY---FYLAMILAFLVKLPMYMFHLW 201
Cdd:MTH00124 136 WGNQPERLSAGTYFLFYTLISSLPLLIAILYLHNQTGTLSLPMLQlthpTLTNSWTnllLWLACLMAFMVKMPLYGLHLW 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 202 LPKAHVEAPISGSMVLAGILLKLGGYGLIRVFKCMVFFSLNFNFYVVLFSLYGGLMVSLICLRQLDLKMLIAYSSVSHMS 281
Cdd:MTH00124 216 LPKAHVEAPIAGSMVLAAILLKLGGYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMG 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 282 LVISGLFSMNIWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFLLNKGMISYMPSMSLWWFMLSACNMSAPPSLNL 361
Cdd:MTH00124 296 LVIAATMIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINL 375
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1824669242 362 IGEISLLNGLISYSWYTMFFLFFLSFFSCAYSLFLYSYSQHG 403
Cdd:MTH00124 376 MGELTIMTSLFNWSPTTIILTGLATLITASYTLYMFLSTQRG 417
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
1-430 |
7.21e-95 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 293.00 E-value: 7.21e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 1 MLMFIFSLLFMIPLALLNSWWLVQFWFFFLSFIFVFFGDFSFFIINAGFGMGLDFFSWLMILLSFWICSLMIMSSQSIKS 80
Cdd:MTH00206 5 PLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQNHMK 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 81 LCYFSD--LYMLVVLLLMLSLYISFSVTNLFNFYLFFEFSLVPTLMLILGWGYQPERVSASMYLIFYTVAASLPLLSCIL 158
Cdd:MTH00206 85 NEPINRqrIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALL 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 159 WIEGQVGGLFYYLLFDLCNSFYF----YLAMILAFLVKLPMYMFHLWLPKAHVEAPISGSMVLAGILLKLGGYGLIRVFK 234
Cdd:MTH00206 165 FLQNSLGSLSLYILYFSKLTTWNnnlwWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIIL 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 235 CMVFFSLNFNFYVVLFSLYGGLMVSLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNIWGYYGSIIMMLGHGLCSSGLFC 314
Cdd:MTH00206 245 ILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFC 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 315 LSNISYERLGSRLFLLNKGMISYMPSMSLWWFMLSACNMSAPPSLNLIGEISLLNGLISYSWYTMFFLFFLSFFSCAYSL 394
Cdd:MTH00206 325 LANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSL 404
|
410 420 430
....*....|....*....|....*....|....*.
gi 1824669242 395 FLYSYSQHGNFYSGLYSVSSCYLIEFHLIFLHWFPL 430
Cdd:MTH00206 405 YMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPV 440
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-436 |
6.36e-93 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 287.97 E-value: 6.36e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 1 MLMFIFSLLFMIPLALL-NSWWL-----VQFWFFFLSFIFVFFGDFSFFIINAGFgMGLDFFSWLMILLSFWICSLMIMS 74
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLsPKKWLwtlttTNSLIIAFLSLMWFNLPSETMNFTNKY-FGIDQISSPLLILTCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 75 SQSIKSL--CYFSDLYMLVVLLLMLSLYISFSVTNLFNFYLFFEFSLVPTLMLILGWGYQPERVSASMYLIFYTVAASLP 152
Cdd:MTH00068 80 SQNHLKNepINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 153 LLSCILWIEGQVGGLFYYLLFDLCNSFY-------FYLAMILAFLVKLPMYMFHLWLPKAHVEAPISGSMVLAGILLKLG 225
Cdd:MTH00068 160 LLIALLILQNSLGSLSLILLELMSPMQLmtytnkiWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 226 GYGLIRVFKCMVFFSLNFNFYVVLFSLYGGLMVSLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNIWGYYGSIIMMLGH 305
Cdd:MTH00068 240 GYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 306 GLCSSGLFCLSNISYERLGSRLFLLNKGMISYMPSMSLWWFMLSACNMSAPPSLNLIGEISLLNGLISYSWYTMFFLFFL 385
Cdd:MTH00068 320 GLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLG 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 1824669242 386 SFFSCAYSLFLYSYSQHGNFYSGLYSVSSCYLIEFHLIFLHWFPLnIMFMC 436
Cdd:MTH00068 400 TLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPM-LLLIL 449
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
46-430 |
7.80e-91 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 282.63 E-value: 7.80e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 46 NAGFGMGLDFFSWLMILLSFWICSLMIMSSQSikSLCYFSDL----YMLVVLLLMLSLYISFSVTNLFNFYLFFEFSLVP 121
Cdd:MTH00044 52 NLSLSLATDSLSSPLIILSCWLAPLSLLASIN--HLSNNSPNnqrtFISLIIIILTALIITFSSLELILFYIAFETTLIP 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 122 TLMLILGWGYQPERVSASMYLIFYTVAASLPLLSCILWIEGQVGGLFY---YLLFDLCNSFYFY----LAMILAFLVKLP 194
Cdd:MTH00044 130 TLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIYSSSSSLSIplsELNWLTSLSSNSSsiwwIFCILAFLVKMP 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 195 MYMFHLWLPKAHVEAPISGSMVLAGILLKLGGYGLIRVFKCMVF-FSLNFNFYVVLFSLYGGLMVSLICLRQLDLKMLIA 273
Cdd:MTH00044 210 IYGFHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLINLFSLpSANNISFILIVFCCWGALITSIICLRQTDLKALIA 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 274 YSSVSHMSLVISGLFSMNIWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFLLNKGMISYMPSMSLWWFMLSACNM 353
Cdd:MTH00044 290 YSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANL 369
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1824669242 354 SAPPSLNLIGEISLLNGLISYSWYTMFFLFFLSFFSCAYSLFLYSYSQHGNFYSGLYSVSSCYLIEFHLIFLHWFPL 430
Cdd:MTH00044 370 GLPPLPNLIGELLIISSIISWSILSFPIIGLATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPL 446
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
60-430 |
1.14e-84 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 266.76 E-value: 1.14e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 60 MILLSFWICSLMIMSSQS--IKSLCYFSDLYMLVVLLLMLSLYISFSVTNLFNFYLFFEFSLVPTLMLILGWGYQPERVS 137
Cdd:MTH00110 65 LLILTTWLLPLMLMASQHhlSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLN 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 138 ASMYLIFYTVAASLPLLSCILWIEGQVGGL--------FYYLLFDLCNSFyFYLAMILAFLVKLPMYMFHLWLPKAHVEA 209
Cdd:MTH00110 145 AGLYFLFYTLVGSLPLLVALLYIQNNLGSLnflllqlwAQPLPNSWSNNL-LWLACMMAFMVKMPLYGLHLWLPKAHVEA 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 210 PISGSMVLAGILLKLGGYGLIRVFKCMVFFSLNFNFYVVLFSLYGGLMVSLICLRQLDLKMLIAYSSVSHMSLVISGLFS 289
Cdd:MTH00110 224 PIAGSMVLAAILLKLGGYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILI 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 290 MNIWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFLLNKGMISYMPSMSLWWFMLSACNMSAPPSLNLIGEISLLN 369
Cdd:MTH00110 304 QTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIM 383
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1824669242 370 GLISYSWYTMFFLFFLSFFSCAYSLFLYSYSQHGNFYSGLYSVSSCYLIEFHLIFLHWFPL 430
Cdd:MTH00110 384 SSFSWSNITIILMGLNMLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPL 444
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
51-430 |
2.18e-78 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 250.64 E-value: 2.18e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 51 MGLDFFSWLMILLSFWICSLMIMSSQSIKSLCYFSD--LYMLVVLLLMLSLYISFSVTNLFNFYLFFEFSLVPTLMLILG 128
Cdd:MTH00127 57 MATDPLSTPLLVLTCWLLPLMILASQNHTAPEPINRqrMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITR 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 129 WGYQPERVSASMYLIFYTVAASLPLLSCILWIEGQVGGL-------FYYLLFDLCNSFYFYLAMILAFLVKLPMYMFHLW 201
Cdd:MTH00127 137 WGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLsmltlqySQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLW 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 202 LPKAHVEAPISGSMVLAGILLKLGGYGLIRVFKCMVFFSLNFNFYVVLFSLYGGLMVSLICLRQLDLKMLIAYSSVSHMS 281
Cdd:MTH00127 217 LPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMG 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 282 LVISGLFSMNIWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFLLNKGMISYMPSMSLWWFMLSACNMSAPPSLNL 361
Cdd:MTH00127 297 LVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNL 376
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1824669242 362 IGEISLLNGLISYSWYTMFFLFFLSFFSCAYSLFLYSYSQHGNFYSGLYSVSSCYLIEFHLIFLHWFPL 430
Cdd:MTH00127 377 MGELMIITSLFNWSPWTLALTGLGTLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPL 445
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
103-376 |
2.11e-55 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 191.06 E-value: 2.11e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 103 FSVTNLFNFYLFFEFSLVPTLMLILGWGYqPERVSASMYLIFYTVAASLPLLSCILWIeGQVGGLFYYLLFDLCNS---- 178
Cdd:COG1008 128 FLALDLFLFYVFWELMLIPMYFLIGIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILAL-YFLAGALTFDIAELAAAplpl 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 179 ---FYFYLAMILAFLVKLPMYMFHLWLPKAHVEAPISGSMVLAGILLKLGGYGLIRVfkCMVFF---SLNFNFYVVLFSL 252
Cdd:COG1008 206 taqLLLFLAFFIAFAVKVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRF--ALPLFpeaSAYFAPLLAALGV 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 253 YGGLMVSLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNIWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFLLNK 332
Cdd:COG1008 284 IGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLG 363
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1824669242 333 GMISYMPSMSLWWFMLSACNMSAPPSLNLIGEISLLNGLISYSW 376
Cdd:COG1008 364 GLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNP 407
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
52-397 |
2.56e-55 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 190.66 E-value: 2.56e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 52 GLDFFSWLMILLSFWICSLMIMSSQsiKSLCYFSDLYMLVVLLLMLSLYISFSVTNLFNFYLFFEFSLVPTLMLILGWGY 131
Cdd:MTH00204 80 AVDGVSLFFILLTTLLIPICILISW--KSIKFLFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGS 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 132 QPERVSASMYLIFYTVAASLPLLSCILWIEGQVGGLFYYLL----FDLCNSFYFYLAMILAFLVKLPMYMFHLWLPKAHV 207
Cdd:MTH00204 158 REEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILlnikLPLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAHV 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 208 EAPISGSMVLAGILLKLGGYGLIRvFKCMVF--FSLNFNFYVVLFSLYGGLMVSLICLRQLDLKMLIAYSSVSHMSLVIS 285
Cdd:MTH00204 238 EAPVAGSVILAGILLKLGGYGFLR-FSWPLFpaASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPL 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 286 GLFSMNIWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFLLNKGMISYMPSMSLWWFMLSACNMSAPPSLNLIGEI 365
Cdd:MTH00204 317 GLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEF 396
|
330 340 350
....*....|....*....|....*....|..
gi 1824669242 366 SLLNGLISYSWYTMFFLFFLSFFSCAYSLFLY 397
Cdd:MTH00204 397 FSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
106-379 |
6.92e-52 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 176.35 E-value: 6.92e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 106 TNLFNFYLFFEFSLVPTLMLILGWGYQPERVSASMYLIFYTVAASLPLLSCILWIEGQVGGLFYYLLFDLCN-------S 178
Cdd:pfam00361 2 NDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTgglnssgL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 179 FYFYLAMILAFLVKLPMYMFHLWLPKAHVEAPISGSMVLAGILLKLGGYGLIRVFKCMVFFSLNFNFYVVLFSLYGGLMV 258
Cdd:pfam00361 82 LLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLLG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 259 SLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNIWGYYGSIIMMLGHGLCSSGLFCLS-NISYERLGSRLFLLNKGMISY 337
Cdd:pfam00361 162 SLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAKT 241
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 1824669242 338 MPSMSLWWFMLSACNMSAPPSLNLIGEISLLNGLISYSWYTM 379
Cdd:pfam00361 242 MPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFL 283
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
103-397 |
4.60e-51 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 179.48 E-value: 4.60e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 103 FSVTNLFNFYLFFEFSLVPTLMLILGWGYQPERVSASMYLIFYTVAASLPLLSCILWIEGQVGGLFYYLL----FDLCNS 178
Cdd:MTH00217 126 FTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALcclkIEKELQ 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 179 FYFYLAMILAFLVKLPMYMFHLWLPKAHVEAPISGSMVLAGILLKLGGYGLIRV-FKCMVFFSLNFNFYVVLFSLYGGLM 257
Cdd:MTH00217 206 YFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFsWPLLPEASEYFSPLIQTLSLLAIIY 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 258 VSLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNIWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFLLNKGMISY 337
Cdd:MTH00217 286 GSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVIT 365
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 338 MPSMSLWWFMLSACNMSAPPSLNLIGEISLLNGLISYSWYTMFFLFFLSFFSCAYSLFLY 397
Cdd:MTH00217 366 MPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
45-397 |
8.27e-51 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 178.86 E-value: 8.27e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 45 INAGFGMGLDFFSWLMILLSFWICSLMIMSS-QSIKslcYFSDLYMLVVLLLMLSLYISFSVTNLFNFYLFFEFSLVPTL 123
Cdd:PRK05846 72 FGISYHLGVDGISLLLVVLTALLTPLAVLASwEEIK---KRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMY 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 124 MLILGWGYqPERVSASMYLIFYTVAASLPLLSCIL---WIEGQVGGLF-----YYLLFDLCNSFYFYLAMILAFLVKLPM 195
Cdd:PRK05846 149 FLIGVWGG-KNRIYAATKFFLYTLLGSLLMLVAIIylvVVYYNATGTFdiadlLNLPLPPGVQYWLFLAFFIAFAVKMPM 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 196 YMFHLWLPKAHVEAPISGSMVLAGILLKLGGYGLIRVfkCMVFF---SLNFNFYVVLFSLYGGLMVSLICLRQLDLKMLI 272
Cdd:PRK05846 228 FPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRF--SLPLFpdaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLI 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 273 AYSSVSHMSLVISGLFSMNIWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFLLNKGMISYMPSMSLWWFMLSACN 352
Cdd:PRK05846 306 AYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMAS 385
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 1824669242 353 MSAPPSLNLIGEISLLNGLISYSWYTMFFLFFLSFFSCAYSLFLY 397
Cdd:PRK05846 386 LGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLY 430
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
45-397 |
2.08e-50 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 177.44 E-value: 2.08e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 45 INAGFGMGLDFFSWLMILLSFWICSLMIMSSQsiKSLCYFSDLYMLVVLLLMLSLYISFSVTNLFNFYLFFEFSLVPTLM 124
Cdd:TIGR01972 67 LGISYHLGVDGISLLLVLLTALLTLLAILASW--ESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYL 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 125 LILGWGyQPERVSASMYLIFYTVAASLPLLSCILWIEGQVGGLFYYLLFdLCNSFYF------YLAMILAFLVKLPMYMF 198
Cdd:TIGR01972 145 LIGVWG-GPNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTFDLLEL-LNLPLPFgvqtwlFLAFFIAFAVKVPLFPL 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 199 HLWLPKAHVEAPISGSMVLAGILLKLGGYGLIRVfkCMVFF---SLNFNFYVVLFSLYGGLMVSLICLRQLDLKMLIAYS 275
Cdd:TIGR01972 223 HTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRF--NLPLFpdaSLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYS 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 276 SVSHMSLVISGLFSMNIWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFLLNKGMISYMPSMSLWWFMLSACNMSA 355
Cdd:TIGR01972 301 SISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGL 380
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1824669242 356 PPSLNLIGEISLLNGLISYSWYTMFFLFFLSFFSCAYSLFLY 397
Cdd:TIGR01972 381 PGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
58-376 |
4.11e-45 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 163.94 E-value: 4.11e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 58 WLMILLSFWICSLMIMSSQSIKslcYFSDLYMLVVLLLMLSLYISFSVTNLFNFYLFFEFSLVPTLMLILGWGYQPERVS 137
Cdd:MTH00226 106 YFIILTGFIVPCSILISWHSVK---YLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQ 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 138 ASMYLIFYTVAASLPLLSCILWIEgQVGGLFYYLLFDLCNSF-------YFYLAMILAFLVKLPMYMFHLWLPKAHVEAP 210
Cdd:MTH00226 183 AAYYFFFYTLIGSVLMLLCLFSLY-NIHGTTDYLTLASCSHVvseqtqkWIFLGIFLAMAVKIPIFPFHIWLPKAHVEAP 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 211 ISGSMVLAGILLKLGGYGLIRV-FKCMVFFSLNFNFYVVLFSLYGGLMVSLICLRQLDLKMLIAYSSVSHMSLVISGLFS 289
Cdd:MTH00226 262 VAGSVLLAGILLKLGGYGLVRLsWPILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVT 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 290 MNIWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFLLNKGMISYMPSMSLWWFMLSACNMSAPPSLNLIGEisLLN 369
Cdd:MTH00226 342 HDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGE--YLS 419
|
....*..
gi 1824669242 370 GLISYSW 376
Cdd:MTH00226 420 ILSSFNW 426
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
103-434 |
1.13e-39 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 146.98 E-value: 1.13e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 103 FSVTNLFNFYLFFEFSLVPTLMLILGWGYQPERVSASMYLIFYTVAASLPLLSCILwiegQVGGLFYYLLFDLCNSFYFY 182
Cdd:MTH00094 79 FVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYL----KNFFFFSLCYFDFFLSWEMF 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 183 LAMILAFLVKLPMYMFHLWLPKAHVEAPISGSMVLAGILLKLGGYGLIRVFKCMVFFSLNFnfyVVLFSLYGGLMVSLIC 262
Cdd:MTH00094 155 FILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFVYNNF---WIIFSLLGMILSSFCC 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 263 LRQLDLKMLIAYSSVSHMSLVISGLFSMNIWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFLLNKGMISYMPSMS 342
Cdd:MTH00094 232 VFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFG 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 343 LWWFMLSACNMSAPPSLNLIGEISLLNGLISYSWYTMFFLFFLSFFSCAYSLFLYSYSQHGNFYSGLYSVSSCYLIEFHL 422
Cdd:MTH00094 312 LIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVGLSLPLVF 391
|
330
....*....|..
gi 1824669242 423 IFLHWFPLNIMF 434
Cdd:MTH00094 392 MMFNMFWLSLFY 403
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
103-322 |
1.08e-31 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 126.68 E-value: 1.08e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 103 FSVTNLFNFYLFFEFSLVPTLMLILGWGYQpERVSASMYLIFYTVAASLPLLSCILWIeGQVGGLFYYLLFDLCNSFY-- 180
Cdd:PRK12561 104 FLAQDLLLFFLMWELELVPVYLLISIWGGQ-KRLYAATKFILYTALASIFILVAGLAL-ALSGDTFTFDLAELGAKSYpl 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 181 -----FYLAMILAFLVKLPMYMFHLWLPKAHVEAPISGSMVLAGILLKLGGYGLIRvFKCMVFFSLNFNFYVVLFSL--- 252
Cdd:PRK12561 182 alellLYAGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIR-FNVQMLPDAHVYFAPALAILgvv 260
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1824669242 253 ---YGGLMvsliCLRQLDLKMLIAYSSVSHMSLVISGLFSMNIWGYYGSIIMMLGHGLCSSGLFCLSNISYER 322
Cdd:PRK12561 261 niiYGALN----AFAQDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYER 329
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
102-363 |
2.87e-29 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 119.66 E-value: 2.87e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 102 SFSVTNLFNFYLFFEFSLVPTLMLILGWGYQpERVSASMYLIFYTVAASLPLLSCILWIEGQVGGLFYYLLFDLCNSFY- 180
Cdd:CHL00011 128 LFSSRDLLLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGMGLYGSNEPTLNFETLANQSYp 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 181 ------FYLAMILAFLVKLPMYMFHLWLPKAHVEAPISGSMVLAGILLKLGGYGLIRVfkCMVFFS---LNFNFYVVLFS 251
Cdd:CHL00011 207 valeilFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRI--NMELLPhahSIFSPWLVIVG 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 252 LYGGLMVSLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNIWGYYGSIIMMLGHGLCSSGLFCLSNISYERLgsRLFLLN 331
Cdd:CHL00011 285 AIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYLD 362
|
250 260 270
....*....|....*....|....*....|....
gi 1824669242 332 K--GMISYMPSMslwWFMLSACNMSappSLNLIG 363
Cdd:CHL00011 363 EmgGIAIPMPKI---FTMFSSFSMA---SLALPG 390
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
103-377 |
2.44e-28 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 116.01 E-value: 2.44e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 103 FSVTNLFNFYLFFEFSLVPTLMLILGWGYQPERVSASMYLIFYTVAASLpLLSCILWIEGQVGGLFYYLL---FDLCNSF 179
Cdd:COG0651 124 FLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSAL-FLLGVGLLYGATGTLNMADLaarLAELDPG 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 180 YFYLAMIL---AFLVKLPMYMFHLWLPKAHVEAPISGSMVLAGILLKLGGYGLIRVFKCM--VFFSLNFNFYVVLFSLYG 254
Cdd:COG0651 203 LLLAAFALllvGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLfgADPALFLGTLLLVLGLLT 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 255 GLMVSLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNIWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFLLNKGM 334
Cdd:COG0651 283 MLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGL 362
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1824669242 335 ISYMPSMSlWWFMLSACNMSA-PPSLNLIGEISLLNGLISYSWY 377
Cdd:COG0651 363 GKRMPLTA-AAFLIGALALAGlPPLSGFVSKWLLLQAALEAGAW 405
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
103-379 |
2.79e-25 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 108.26 E-value: 2.79e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 103 FSVTNLFNFYLFFEFSLVPTLMLILGWGYQpERVSASMYLIFYTVAASLPLLSCILWIeGQVGGLFYYLLFDLCNSFY-- 180
Cdd:PRK02546 132 FAVQDMLLFFLAWELELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAM-AFYGDTPTFDMTALAAKDFgl 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 181 -----FYLAMILAFLVKLPMYMFHLWLPKAHVEAPISGSMVLAGILLKLGGYGLIRvFKCMVFFSLNFNFYVVLFSL--Y 253
Cdd:PRK02546 210 gfqllCYAGLLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLR-MNAGMLPDAHAQFAPLLIVLgvV 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 254 GGLMVSLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNIWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFLLNKG 333
Cdd:PRK02546 289 NIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGG 368
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1824669242 334 MISYMPSMSLWWFMLSACNMSAPPSLNLIGEISLLNGLISYSWYTM 379
Cdd:PRK02546 369 VGQKMRKMFAMWTACSLASLALPGMSGFVAELMVFVGFATSDAYTL 414
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
102-326 |
4.00e-24 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 104.40 E-value: 4.00e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 102 SFSVTNLFNFYLFFEFSLVPTLMLILGWGYQPERVSASMYLIFYTVAASLPLLSCI--LWIEGQVGGLFYYLL---FDLC 176
Cdd:PRK06473 123 AFLAQDLLLFFLFYELELIPLYLLIAIWGGQRRGYAATKFLLYTAISGILILVSFLglVWLSGASSFDYEPLRshtLPLS 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 177 NSFYFYLAMILAFLVKLPMYMFHLWLPKAHVEAPISGSMVLAGILLKLGGYGLIR-----VFKCMVFFSLNFNFYVVLFS 251
Cdd:PRK06473 203 TQLLLLAPILVGFGIKIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRfgvglFPEAWVYLAPWLATWAVVSV 282
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1824669242 252 LYGGLMVslicLRQLDLKMLIAYSSVSHMSLVISGLFSMNIWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSR 326
Cdd:PRK06473 283 LYGASCA----IAQKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSR 353
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
107-377 |
2.99e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 95.72 E-value: 2.99e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 107 NLFNFYLFFEFSLVPTLMLILGWGYQPERVSASMYLIFYTVAASLPLLSCILwIEGQVGGLFYYLLFDLCNS-------F 179
Cdd:PRK08375 127 DLFNLFVFLEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGL-LYGVTGTLNMADLAGALAEnptvvtaF 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 180 YFylaMILAFLVKLPMYMFHLWLPKAHVEAPISGSMVLAGILLKLGGYGLIR----VFKCMVFFSLNFNFYVVLFSLYGG 255
Cdd:PRK08375 206 GF---VLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRiyftVFGGDFRFALGLGWLLAVLALLSM 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 256 LMVSLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNIWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFLLNKGMI 335
Cdd:PRK08375 283 LVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLG 362
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 1824669242 336 SYMPSMSLWWFMLSACNMSAPPSLNLIGEISLLNGLISYSWY 377
Cdd:PRK08375 363 RRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQW 404
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
53-368 |
1.58e-18 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 87.29 E-value: 1.58e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 53 LDFFSWLMILLSFWICSLMIMSSQSIkslcyFSDLYMLVVLLLMLSLYISFSVTNLFNFYLFFEFSLVPTLMLILGWGYQ 132
Cdd:MTH00062 43 FDSLSFYLILLVLFLGLYSQVMFYNL-----LSGVSRFFLFLSLIFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPY 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 133 PERVSASMYLIFYTVAASLPLLSCILWIeGQVGGLFYYLLFDLCNSFYF--YLAMILAFLVKLPMYMFHLWLPKAHVEAP 210
Cdd:MTH00062 118 SERYLASWYFLGYLLLTSLPLLLCLLYL-SLVNGSFNFSDWGSDDSVSLivYYVLSFMFITKVPLFPFHTWLPIVHAEAS 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 211 ISGSMVLAGILLKLGGYGLIRVfkCMVFFSLNFNFYVVLFSLYgGLMVSLICLRQLDLKMLIAYSSVSHMSLVISGLFSM 290
Cdd:MTH00062 197 SPVSIFLSGYIMKLGLLGVYRF--CGFIFSGSFLGYLFLCCLF-SVFFLITACSELDGKRWLAFLSLSHILVPVLGLFVG 273
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1824669242 291 NIWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFLLNKGMISYMPSMSLWWFMLSACNMSAPPSLNLIGEISLL 368
Cdd:MTH00062 274 DWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLV 351
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
102-326 |
2.32e-17 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 83.99 E-value: 2.32e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 102 SFSVTNLFNFYLFFEFSLVPTLMLILGWGYQpERVSASMYLIFYTVAASLPLLSCIL---WIEGQVGGLFYYLL---FDL 175
Cdd:PRK07363 123 ALLAQNLLLFFLFYELELIPFYLLIAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLgivWLSGSTSFDYDAIStqnLSL 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 176 CNSFYFYLAMILAFLVKLPMYMFHLWLPKAHVEAPISGSMVLAGILLKLGGYGLIRvFKCMVF------FSLNFNFYVVL 249
Cdd:PRK07363 202 NTQLILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLR-FGLQLFpqtwslVAPGLAIIGTI 280
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1824669242 250 FSLYGglmvSLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNIWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSR 326
Cdd:PRK07363 281 SVIYG----ALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTR 353
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
199-350 |
5.84e-12 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 67.26 E-value: 5.84e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 199 HLWLPKAHVEAPISGSMVLAGILLKLGGYGLIRvFKCMVFFSLNFNFYVVLFSLYGGLMV---SLICLRQLDLKMLIAYS 275
Cdd:PRK06458 234 HAWLPDAHSEAPSPVSALLSGVLLNVALYAVLR-YYILIDAAIGSDFPGRLLLIFGLLSVlvaAFFLLRQRDIKRLFAYS 312
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1824669242 276 SVSHMSLVISGLFSMNIWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFLLNKGMISYMPSMSlWWFMLSA 350
Cdd:PRK06458 313 SIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTG-WGLMLGA 386
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-378 |
1.05e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 66.53 E-value: 1.05e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 108 LFNFYLFFEFSLVPTLMLILGWGYQPERVSASM-YLIFYTVAASLPLLSCILwIEGQVGGL--------FYYLLFDLCNS 178
Cdd:PRK12667 135 AFNLFVMLEVLSISAYGLVAYYRDRGDAVEAAIkYALIGAVGTTLYFLALAF-LYATFGTLnmadlsakIRGLSFPLTGG 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 179 FY---------FYLAMILAFLVKLPMYMFHLWLPKAHVEAPISGSMVLAGILLKLGGYGLIRVF-------KCMVFFSLN 242
Cdd:PRK12667 214 LAgnpplalgvALALALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLytifgisPSLIDFRAA 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 243 FNFYVVLFSLYGGLMVSLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNIWGYYGSIIMMLGHGLCSSGLFCLSNISYER 322
Cdd:PRK12667 294 LSPILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHA 373
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1824669242 323 LGSRLFLLNKGMISYMPSMSLWWFMLSACNMSAPPSLNLIGEISLLNGLISYSWYT 378
Cdd:PRK12667 374 AGTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYL 429
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
107-372 |
7.57e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 63.98 E-value: 7.57e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 107 NLFNFYLFFEFSLVPTLMLILGWGYQPERVSASMYLIFYTVAASLPLLSCILWIEGQVGGLFYYLLFDLCNSFYF-YLAM 185
Cdd:PRK08667 132 NTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLvFLLL 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 186 ILAFLVKLPMYMFHLWLPKAHVEAPISGSMVLAGILLKLGGYGLIRVFKCMVFFSLNFNFYVVLFSLYGGLMVSLICLRQ 265
Cdd:PRK08667 212 FLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKE 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 266 LDLKMLIAYSSVSHMSLVISGLFSMNIWGYYGSIIMML-----------GHGLCSSGLFCLSNISYERLGSRLFLLNKGM 334
Cdd:PRK08667 292 HDLKGLLAYSSIENIGIILMGIGLYVIFGVYGLDTLALlalggalfhslNHALFKSLLFLTAGSVVHATGTRNIEKMGGL 371
|
250 260 270
....*....|....*....|....*....|....*...
gi 1824669242 335 ISYMPSMSLWWFMLSACNMSAPPSLNLIGEISLLNGLI 372
Cdd:PRK08667 372 VKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
101-328 |
4.18e-10 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 61.69 E-value: 4.18e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 101 ISFSVTNLFNFYLFFEFSLVPTLMLILGWGYQPERVSASMYLIFYTVAASLPLLSCILWIE-----GQVGGLFYYLLFDL 175
Cdd:PRK08676 117 FAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAMIFAFIGLIFLFSltrqaLGTGTLNWTELAAH 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 176 CNSF------YFYLAMILAFLVKLPMYMFHLWLPKAHVEAPISGSMVLAGILLKLGGYGLIRVFKCMVFFSLNFNFYVVL 249
Cdd:PRK08676 197 ASLLspsvlgASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGAAEQFSNVL 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 250 FSLyGGLMVSLIC---LRQLDLKMLIAYSSVSHMSLVISGLFSMNIWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSR 326
Cdd:PRK08676 277 IGL-GIFSIAVAAfsmLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSD 355
|
..
gi 1824669242 327 LF 328
Cdd:PRK08676 356 RF 357
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
103-322 |
1.92e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 59.58 E-value: 1.92e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 103 FSVTNLFNFYLFFEFSLVPTLMLILGWGYQPERVSASMYLIFYTVAASLPLLSCIL--WIEGQVGglfyylLFDLCNSFY 180
Cdd:PRK07234 111 FVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLvyQANGTFA------FSGLATADP 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 181 FYLAMI-LAFLVKLPMYMFHLWLPKAHVEAPISGSMVLAGILLKLGGYGLIRVfkcmVFFSLNFNFYVVLFSLYGGLMVS 259
Cdd:PRK07234 185 EAFALIaLGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRC----ALDVPGLDLIVRIFGVGTALLGV 260
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1824669242 260 LICLRQLDLKMLIAYSSVSHMSLVISGlfsMNIWGYYGsiimmLGHGLCSSGLFCLSNISYER 322
Cdd:PRK07234 261 LFALLEKDLKRMLAFSTISQLGFILAA---PLVGGLYA-----LAHGLVKSTLFLCAGALPSR 315
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
181-313 |
2.78e-09 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 59.24 E-value: 2.78e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 181 FYLAMILAFLVKLPMYMFHLWLPKAHVEAPISGSMVLAGILLKLGGYGLIRVFKCMVFFSLNFNFYVV--------LFSL 252
Cdd:PRK08668 198 VFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLPGTKLFSEFGTYrgvplfnyILAW 277
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1824669242 253 YGGLMV---SLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNIWGYYGSIIMMLGHGLCSSGLF 313
Cdd:PRK08668 278 LGNISIivgTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
107-373 |
8.01e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 57.44 E-value: 8.01e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 107 NLFNFYLFFEFSLVPTLMLILGWGYQPERVSASMYLIFYTVAASLPLLScILWIEGQVGGL----FYYLLFDLCNSFYFY 182
Cdd:PRK12662 131 DVFNIYVFLEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIG-IGFLYAITGTLnmgdMFLIIQDLPTNRAIQ 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 183 LAMILAFL---VKLPMYMFHLWLPKAHVEAPISGSMVLAGILLKLGGYGLIRVF-----KCMVFFSLNFNFYVVLFSLYG 254
Cdd:PRK12662 210 IGVLFIMVglfIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVydvfkANFVFTTLPFNNVFMILAALA 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 255 GLMVSLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNIWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFLLNKGM 334
Cdd:PRK12662 290 IVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNL 369
|
250 260 270
....*....|....*....|....*....|....*....
gi 1824669242 335 ISYMPSMSLWWFMLSACNMSAPPSLNLIGEISLLNGLIS 373
Cdd:PRK12662 370 WKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIK 408
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-368 |
1.52e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 53.43 E-value: 1.52e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 108 LFNFYLFFEFSLVPTLMLiLGWGYQPERVSASMYLIFYTVAASLPLLSCILWIEGQVGGLFyylLFDLCNSF-------- 179
Cdd:PRK12665 133 LFNLYVGFEILLVASYVL-LTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLN---MADLAVRLdelpsgtr 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 180 -YFYLAMILAFLVKLPMYMFHLWLPKAHVEAPISGSMVLAGILLKLGGYGLIRVfKCMVFFSLNFNFYVVLFSLYGGLMV 258
Cdd:PRK12665 209 tALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRT-HTLLFPGGGLDTLLMVVALLTMVVG 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 259 SLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNIWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFLLNKGMISYM 338
Cdd:PRK12665 288 ILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKAS 367
|
250 260 270
....*....|....*....|....*....|.
gi 1824669242 339 PSMSLWWFmLSACNMSA-PPSLNLIGEISLL 368
Cdd:PRK12665 368 PLLAVLFF-VPALNLGGiPPFSGFIGKVALL 397
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
107-360 |
3.58e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 52.41 E-value: 3.58e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 107 NLFNFYLFFEFSLVPTLMLILGWGYQPERVSASM-YLIFYTVAASLPLLScILWIEGQVGGLFYYLLFDLCNSFYFYLAM 185
Cdd:PRK08376 142 DLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIkYMFVGSLASSMVLLG-IALLYGQYGTLNMAYLAVKMSENPTVVAK 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 186 I-LAFLV-----KLPMYMFHLWLPKAHVEAPISGSMVLagILLKLGG-YGLIRVfkCMVFFSLNFNFYVVlfslyGGLMV 258
Cdd:PRK08376 221 IaLALFIaglamKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARV--LFSIYGPAINLATV-----GWVII 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 259 SLICLR----------QLDLKMLIAYSSVSHMSLVISGL------FSMNIWGYYGSIIM------MLGHGLCSSGLFCLS 316
Cdd:PRK08376 292 ILGCLTmfvgvamavvQKDVKRLLAYHSVSQIGYMLLGLgvglaaLGDPAMASYGEIALaggiyhIVNHALYKALLFLTA 371
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1824669242 317 NISYERLGSRlfLLNK--GMISYMPsMSLWWFMLSACNMSAPPSLN 360
Cdd:PRK08376 372 GAVIYETGTR--NLNElgGLARTMP-KTTIAFLIGAAAIVGLPPFN 414
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
107-313 |
2.75e-06 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 49.38 E-value: 2.75e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 107 NLFNFYLFFEFSLVPTLMLIlGWGYQPERVSASM-YLIFYTVAASLPLLSCILwIEGQVGGLFYYLLFDLCNSFYFYLA- 184
Cdd:PRK08377 129 DIFNLFVFMEITAITAYALT-AYNKTGEAAEASMkYIVLGGIGSSFFLIGVAL-IYGATGTLNMAHIAQLAGTIDPTVAq 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 185 -----MILAFLVKLPMYMFHLWLPKAHVEAPISGSMVLAGILLKLGGYGLIRVFKCMVFFS--LNFNFYVVLFSLYGGLM 257
Cdd:PRK08377 207 vglalLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANgwSSVLKLVIIMATLTVFF 286
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1824669242 258 VSLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNIWGYYGSIIMMLGHGLCSSGLF 313
Cdd:PRK08377 287 AELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLF 342
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
183-287 |
3.83e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 49.12 E-value: 3.83e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 183 LAMILAFL---VKLPMYMFHLWLPKAHVEAPISGSMVLAGILLKLGGYGLIRVfkcmvffslNFNF---------YVVL- 249
Cdd:PRK06521 211 LVFLLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRV---------VFDLlgapgwwwgVLVLa 281
|
90 100 110
....*....|....*....|....*....|....*...
gi 1824669242 250 FSLYGGLMVSLICLRQLDLKMLIAYSSVSHMSLVISGL 287
Cdd:PRK06521 282 LGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGL 319
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
185-395 |
1.16e-05 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 47.64 E-value: 1.16e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 185 MILAFLVKLPMYMFHlWLPKAHVEAPISGSMVLAGILLKLGGYGLIRVFkCMVFFSLNFNFYVVLFSLYGGLMV--SLIC 262
Cdd:PRK12663 213 FLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVF-TLLFPQERELLHPLLATMAAITMVigALGA 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 263 LRQLDLKMLIAYSSVSHMSLVISGLFSMNIWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFLLNKGMISYMPSMS 342
Cdd:PRK12663 291 LAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFG 370
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1824669242 343 LWWFMLSACNMSAPPSLNLIGEISLLNGLISYSWYTMFFLFFLSFFSCAYSLF 395
Cdd:PRK12663 371 ALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSLF 423
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
198-368 |
5.35e-05 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 45.80 E-value: 5.35e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 198 FHLWLPKAHVEA-PIS-----GSMVLAGIllklggYGLIRvfkcmvfFSLNF------NFYVVLFSLYGGLMVSLICLRQ 265
Cdd:PRK12650 227 FHFWLPEAMAAItPVSaflhaAAVVKAGI------YLLLR-------FSPVFhdvavwNWLLIIVGMITALMGAVFAVQK 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 266 LDLKMLIAYSSVSHMSLVISGLFSMNIWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFLLNKGMISYMPsMSLWW 345
Cdd:PRK12650 294 TDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRRMP-FTFVS 372
|
170 180
....*....|....*....|....
gi 1824669242 346 FMLSACNMSA-PPSLNLIGEISLL 368
Cdd:PRK12650 373 VTIAALSMAAvPPLFGFVSKEGML 396
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
108-233 |
6.88e-05 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 45.27 E-value: 6.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 108 LFNFYLFFEFSLVPTLMLILGWGyQPERVSASM-YLIFYTVAASLpLLSCILWiEGQVGGLFYYLLFDLCNSFYFYLAMI 186
Cdd:PRK12668 115 LLTLFVFWELMAFTSTFLVWARG-TKAAVRAGFrYLLVHVLGGVL-LLAGILL-HYAETGSFAFGAIAGLGGTAAWLILI 191
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1824669242 187 lAFLVKLPMYMFHLWLPKAHVEAPISGSMVLAGILLKLGGYGLIRVF 233
Cdd:PRK12668 192 -GFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAF 237
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
102-359 |
7.69e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 44.94 E-value: 7.69e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 102 SFSVTNLFNFYLFFEFSLVPTLMLILGWGYQPERVSASMYLIFYTVAASLPLLScILWIEGQVGGLFyylLFDLCN---- 177
Cdd:PRK07691 124 AFLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQLRESIKYVLINVVSSAFFVVA-VAILYSVVGTLN---MADISVkiae 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 178 ---------SFYFYLAMILaFLVKLPMYMFHLWLPKAHVEAPISGSMVLAGILLKLGGYGLIRVFKCMVFFSLNFNFYVV 248
Cdd:PRK07691 200 lsagqtgliTVVAILFLFV-FATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLI 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 249 LFslYGGLMVSLICL---RQLDLKMLIAYSSVSHMSLVISGLFSMNIWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGS 325
Cdd:PRK07691 279 LI--LALLTIIFGVIgavAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGT 356
|
250 260 270
....*....|....*....|....*....|....
gi 1824669242 326 RLFLLNKGMISYMPSMSlWWFMLSACNMSAPPSL 359
Cdd:PRK07691 357 TDLKKMGGLIKRYPVLG-WMFFIAALSLAGIPPL 389
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
183-360 |
1.14e-04 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 44.75 E-value: 1.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 183 LAMILAFLVKLPMYMFHLWLPKAhVEAPI-------SGSMVLAGILLklggyglirVFKCMVFFSL-NFNFYVVLF-SLY 253
Cdd:PRK12646 214 FMFLLGAFTKSAQFPFHIWLPRA-MAAPTpvsaylhSATMVKAGIFL---------LFRFTPLLGLsNMYIYIVTFvGLI 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 254 GGLMVSLICLRQLDLKMLIAYSSVSHMSLVIS-----GLFSMNIWGYYGSIIMM---------LGHGLCSSGLFCLSNIS 319
Cdd:PRK12646 284 TMLFGSITALKQWDLKGILAYSTISQLGMIMAmvgigGGYAQHQQDAIASIYVFvlfaalfhlMNHAIFKCALFMGVGII 363
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 1824669242 320 YERLGSRLFLLNKGMISYMPSMSLwWFMLSACNMSAPPSLN 360
Cdd:PRK12646 364 DHEAGTRDIRILSGMRQLFPKMNL-VMTIAALSMAGVPFLN 403
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
107-284 |
1.86e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 44.14 E-value: 1.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 107 NLFNFYLFFEFSLVPTLMLIlgwGYQPERVS---ASMYLIFYTVAASLPLLSCILwIEGQVGGLFYY--LLFDLCNSFYF 181
Cdd:PRK12644 127 NLLLLYVFWELTTVLSFLLI---GHYAERAAsrrAALQALLVTTAGGLAMLVGII-ILGQAAGTYRLseLLADPPTGPAV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 182 YLAMILAF---LVKLPMYMFHLWLPKAhVEAPI-------SGSMVLAGILL--KLG-GYGLIRVFKCMVffslnfnfyVV 248
Cdd:PRK12644 203 SVAVVLILvgaLSKSAIVPFHFWLPGA-MAAPTpvsaylhAAAMVKAGIYLvaRLApGFADVPVWRPTV---------LV 272
|
170 180 190
....*....|....*....|....*....|....*....
gi 1824669242 249 LFS---LYGGLMVslicLRQLDLKMLIAYSSVSHMSLVI 284
Cdd:PRK12644 273 LGLatmLLGGWRA----LRQHDLKLILAYGTVSQLGFLT 307
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
104-302 |
2.75e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 42.71 E-value: 2.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 104 SVTNLFNFYLFFEFSLVPTLMLILGWGYQPERVSASM-YLIFYTVAASLPLLSCILWIEGQVGGLFYYLLFDLCNSFYF- 181
Cdd:MTH00196 11 SSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLkYFVLGALSSGLFLFGCALLCGTTGGLHLSYINLVLNSGQSFs 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 182 -------YLAMILAFLVKLPMYMFHLWLPKAHVEAPISGSMVLAgILLKLGgyglirVFKCMVFFSLNFNFYVV--LFSL 252
Cdd:MTH00196 91 svsvpigYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLA-IVPKLG------IFSILVSIGLNVNILLIggLFSL 163
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1824669242 253 YGGlmvSLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNIWGYYGSIIMM 302
Cdd:MTH00196 164 FVG---AIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYL 210
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
107-278 |
2.95e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 43.37 E-value: 2.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 107 NLFNFYLFFEFSLVPTLMLIlgwGYQPERVSA---SMYLIFYTVAASLPLLSCILWIeGQVGGLFYYLLF----DLCNSF 179
Cdd:PRK12647 116 NLITLFVFWELTSITSFLLI---GFNHEREAArraALQALLVTGGGGLALLAGLILL-GNVTGTYSLSELlasgDVIREH 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 180 YFYLAMILAFLV----KLPMYMFHLWLPKAhVEAPI-------SGSMVLAGILL------KLGGYGLirvfkcmvffsln 242
Cdd:PRK12647 192 PLYLAILLLVLGgaftKSAQFPFHFWLPNA-MEAPTpvsaylhSATMVKAGIYLlarlnpVLGGTPL------------- 257
|
170 180 190
....*....|....*....|....*....|....*....
gi 1824669242 243 fnfYVVLFSLYGGL-MV--SLICLRQLDLKMLIAYSSVS 278
Cdd:PRK12647 258 ---WQTILPLFGGLtMLtgALLAVRQTDLKLILAYSTVS 293
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
185-313 |
4.51e-04 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 42.24 E-value: 4.51e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 185 MILAFLVKLPMYMFHLWLPKAHVEAPISGSMVLAgILLKLGGYG-LIRVFKcMVFFSLNFNFYVVLFSLYGGLMV--SLI 261
Cdd:TIGR01770 209 ILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFS-IVPKIAIFAvFLRLFL-YILFGFSEAWQIFLAIIAFLSMLigNFG 286
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 1824669242 262 CLRQLDLKMLIAYSSVSHMSLVISGLFSMNIWGYYGSIIMMLGHGLCSSGLF 313
Cdd:TIGR01770 287 ALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAF 338
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
179-313 |
4.75e-04 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 42.50 E-value: 4.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 179 FYFYLAMILA-FLVKLPMYMFHLWLPKAHVEAPISGSMVLAGILlKLGGYG-LIRVFKcMVFFSLNFNFYVVLFSLYGGL 256
Cdd:PRK05777 203 LLFGLVFLLVgLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAvLLRLLV-VAFGGLSEDWQQVLAIIAIAS 280
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 1824669242 257 MV--SLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNIWGYYGSIIMMLGHGLCSSGLF 313
Cdd:PRK05777 281 MLvgNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-80 |
7.35e-04 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 39.04 E-value: 7.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 1 MLMFIFSLLFMIPLALLN------SWWLVQFWFFFLSFIFVFFGDFSFFIINAGFGMGLDFFSWLMILLSFWICSLMIMS 74
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSkpkwlwTTSTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
....*.
gi 1824669242 75 SQSIKS 80
Cdd:pfam01059 81 SQKHLK 86
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
66-326 |
1.77e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 40.57 E-value: 1.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 66 WICSLM-IMSSQSIKSLCYFSDLYMLVVLLLMLSLYISFSvTNLFNFYLFFEFSLVPTLMLILGWGYQPERVSASMYLIF 144
Cdd:PRK06589 96 WICALLyTPKYLAINNIDSSSRFLFFFNLTILIGVLIALS-SDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKI 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 145 YTVAASLPLLSCILWIEGQVGGLFYYLLFDLCNSFYFYLAMILAF-LVKLPMYMFHLWLPKAHVEAPISGSMVLAGILLK 223
Cdd:PRK06589 175 LMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYgIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVK 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 224 LGGYGLIRV--------FKCMVFFSLNFNFYVVLFSLYGGlmvSLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNIWGY 295
Cdd:PRK06589 255 TGLFCIYKIllyifglsYLQRIFAEFNWLIFIPIVSIFYS---SLKALKTDNIKKILAYSTISQLSLALLSAFILTPKAL 331
|
250 260 270
....*....|....*....|....*....|.
gi 1824669242 296 YGSIIMMLGHGLCSSGLFCLSNISYERLGSR 326
Cdd:PRK06589 332 GAAILHLVSHSFAKICLFYSMGSIYSLKKED 362
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
106-346 |
2.53e-03 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 39.96 E-value: 2.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 106 TNLFNFYLFFEFSLVPTLMLILGWGYQPERVSASMYLIFyTVAASLPLLSCILWIEGQVGGLFYYLLFDLCNS--FYFYL 183
Cdd:PRK06525 133 STLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLI-THIGSLGLYLAAATLFLQTGTFALSALSGLHGSlkYLVFL 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 184 AMILAFLVKLPMYMFHLWLPKAhVEAPISGSMVL-AGILLKLGGYGLIRVFKCMVFFSLNFNFYVVLFSLYGGLMVSLIC 262
Cdd:PRK06525 212 GILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMY 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 263 LRQLDLKMLIAYSSVSHMSLVISGLfSMNIWG----YYGSIIMMLGHGLcSSGLFCLS--NISYErLGSRLFLLNKGMIS 336
Cdd:PRK06525 291 LPQQDMKRLLAYSTITQLGYMFFGL-SLAILGsrlaLEGSIAYIFNHAF-AKSLFFLVagALSYS-CGTRLLPRLRGVLK 367
|
250
....*....|
gi 1824669242 337 YMPSMSLWWF 346
Cdd:PRK06525 368 KLPLVGVGFC 377
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
179-313 |
3.46e-03 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 39.71 E-value: 3.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 179 FYFYLAMILA-FLVKLPMYMFHLWLPKAHVEAPISGSMVLAGILlKLGGYG-LIRVFkCMVFFSLNFNFYVVLFSLYGGL 256
Cdd:COG1007 202 LLLGLVLVLAgLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAaLLRLL-VEAFPGLAADWQLLLAVLAVLS 279
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 1824669242 257 MV--SLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNIWGYYGSIIMMLGHGLCSSGLF 313
Cdd:COG1007 280 MTvgNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAF 338
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
107-360 |
3.73e-03 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 39.63 E-value: 3.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 107 NLFNFYLFFEFSLVPTLMLILGWGYQPERVSASMYLIFYTVAASLPLLScILWIEGQVGGLF-----YYLLFDLCNS-FY 180
Cdd:PRK06277 121 DIFNLYVFFEIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLG-IGFLLASTGTLNitdihNALLVNPTSPvIY 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 181 FYLAMI---LAFLVKLPmyMFHLWLPKAHVEAPISGSMVLAG---ILLKLGGYGLIRVFKCMVFFSlNFNFYVVLFSLYG 254
Cdd:PRK06277 200 GGLLLLifgLLYGSGLP--PFHTIKSDIYAKAKPFGSALLQTfskFVLVALMLVIFKLFGGLSYFP-SAQGVLIALSVLA 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 255 GLMVSLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNIWGYYGSIIMMLGHGLCSSGLFC-LSNISYERLGSRLFLLNkG 333
Cdd:PRK06277 277 MVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLgAGIVSYRTKTSNLRKLG-G 355
|
250 260
....*....|....*....|....*..
gi 1824669242 334 MISYMPSMSLwWFMLSACNMSAPPSLN 360
Cdd:PRK06277 356 LLPVMPVVAF-MVLCAKLAISGVPPFN 381
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
107-287 |
3.73e-03 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 39.91 E-value: 3.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 107 NLFNFYLFFEFSLVPTLMLILGWgYQPER----VSASMYLifyTVAASLPLLSCILWIEGQVGGLFYYLLFD----LCNS 178
Cdd:PRK12645 131 NLIVLYLFWELTSISSFLLISYW-YEREAsrygAQKSMLI---TVFGGLSMLGGFILLYIMTGSFSIREMIAnadeIQNS 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 179 FYFYLAMILAFL---VKLPMYMFHLWLPKAhVEAPI-------SGSMVLAGILLklggyglIRVFKCMVFFSLNFNFYVV 248
Cdd:PRK12645 207 PLFIPAMILILLgafTKSAQFPFYIWLPDA-MEAPTpvsaylhSATMVKAGIYL-------VARFTPIFAGSQVWFWTVT 278
|
170 180 190
....*....|....*....|....*....|....*....
gi 1824669242 249 LFSLYGGLMVSLICLRQLDLKMLIAYSSVSHMSLVISGL 287
Cdd:PRK12645 279 LVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLL 317
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
198-291 |
5.97e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 39.02 E-value: 5.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669242 198 FHLWLPKAhVEAPI-------SGSMVLAGILLklggygLIRVFKcmVFFSLNFNFYVV----LFSLyggLMVSLICLRQL 266
Cdd:PRK12648 226 FHFWLPHA-MAAPTpvsaylhSATMVKAGVFL------LARLWP--VLAGTEEWFWIVggagLITL---LLGAYFALFQH 293
|
90 100
....*....|....*....|....*
gi 1824669242 267 DLKMLIAYSSVSHMSLvISGLFSMN 291
Cdd:PRK12648 294 DLKGLLAYSTISHLGL-ITLLLGLG 317
|
|
| |
