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Conserved domains on  [gi|1824665860|ref|YP_009740800|]
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ATP synthase F0 subunit 8 (mitochondrion) [Sinopodisma lushiensis]

Protein Classification

ATP synthase Fo subunit 8( domain architecture ID 10009594)

mitochondrial ATP synthase Fo subunit 8 is part of the Fo complex of the large, transmembrane F-type ATP synthase (F1Fo ATPase), which is responsible for the final step of oxidative phosphorylation in the electron transport chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP8 MTH00158
ATP synthase F0 subunit 8; Provisional
 1-32 5.16e-06

ATP synthase F0 subunit 8; Provisional


:

Pssm-ID: 177215  Cd Length: 32  Bit Score: 37.82  E-value: 5.16e-06
                         10        20        30
                 ....*....|....*....|....*....|..
gi 1824665860  1 MPQMSPLMWFSLFIMFSIVLILFNQMNFFSFK 32
Cdd:MTH00158   1 MPQMSPMNWLILFILFLITFILFNILNYFIFI 32
 
Name Accession Description Interval E-value
ATP8 MTH00158
ATP synthase F0 subunit 8; Provisional
 1-32 5.16e-06

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177215  Cd Length: 32  Bit Score: 37.82  E-value: 5.16e-06
                         10        20        30
                 ....*....|....*....|....*....|..
gi 1824665860  1 MPQMSPLMWFSLFIMFSIVLILFNQMNFFSFK 32
Cdd:MTH00158   1 MPQMSPMNWLILFILFLITFILFNILNYFIFI 32
ATP-synt_8 pfam00895
ATP synthase protein 8;
1-53 3.08e-03

ATP synthase protein 8;


Pssm-ID: 459986  Cd Length: 54  Bit Score: 31.54  E-value: 3.08e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 1824665860  1 MPQMSPLMWFSLFIMFSIVLILFNQMNFFSFKPMIMKSEQKSKIKNMN-LNWKW 53
Cdd:pfam00895  1 MPQLNTSTWFTTILLMWLTLFILFQLKLSSHTPTNPPPKSLKTTKHPNpWEWKW 54
 
Name Accession Description Interval E-value
ATP8 MTH00158
ATP synthase F0 subunit 8; Provisional
 1-32 5.16e-06

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177215  Cd Length: 32  Bit Score: 37.82  E-value: 5.16e-06
                         10        20        30
                 ....*....|....*....|....*....|..
gi 1824665860  1 MPQMSPLMWFSLFIMFSIVLILFNQMNFFSFK 32
Cdd:MTH00158   1 MPQMSPMNWLILFILFLITFILFNILNYFIFI 32
ATP-synt_8 pfam00895
ATP synthase protein 8;
1-53 3.08e-03

ATP synthase protein 8;


Pssm-ID: 459986  Cd Length: 54  Bit Score: 31.54  E-value: 3.08e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 1824665860  1 MPQMSPLMWFSLFIMFSIVLILFNQMNFFSFKPMIMKSEQKSKIKNMN-LNWKW 53
Cdd:pfam00895  1 MPQLNTSTWFTTILLMWLTLFILFQLKLSSHTPTNPPPKSLKTTKHPNpWEWKW 54
ATP8 MTH00072
ATP synthase F0 subunit 8; Provisional
 1-53 7.60e-03

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 164642  Cd Length: 54  Bit Score: 30.33  E-value: 7.60e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 1824665860  1 MPQMSPLMWFSLFIMFSIVLILFNQMNFFSFKPMIMKSEQKSKIKNMNLNWKW 53
Cdd:MTH00072   1 MPQLNPGPWFAIFLMSWLIFLLILPFKISNHKNLNEPTSQNKKNKPESWNWPW 53
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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