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Conserved domains on  [gi|1824665961|ref|YP_009740920|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Filchnerella qilianshanensis]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009596)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 1.89e-41

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 132.59  E-value: 1.89e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665961   3 TLLMSFMISFLVPMLIMLLATILSKKMINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVIIMK 82
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1824665961  83 SSNLMIWTSTTLFFILILLGGLYHEWKQGALQW 115
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 1.89e-41

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 132.59  E-value: 1.89e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665961   3 TLLMSFMISFLVPMLIMLLATILSKKMINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVIIMK 82
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1824665961  83 SSNLMIWTSTTLFFILILLGGLYHEWKQGALQW 115
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 5.29e-27

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 95.18  E-value: 5.29e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665961  19 MLLATILSKKmINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVIIMKsSNLMIWTSTTLFFIL 98
Cdd:pfam00507   1 LLLSRLLGPK-RPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR-ELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 1824665961  99 ILLGGLYHEWKQGALQ 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 2-115 8.33e-24

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 87.87  E-value: 8.33e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665961   2 MTLLMSFMISFLVPMLIMLLATILSKKMiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVIIM 81
Cdd:COG0838     6 LPILIFLLVALGLALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVF 84

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1824665961  82 KSSNLMIWTStTLFFILILLGGLYHEWKQGALQW 115
Cdd:COG0838    85 RELGWFGLIE-MLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 1.89e-41

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 132.59  E-value: 1.89e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665961   3 TLLMSFMISFLVPMLIMLLATILSKKMINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVIIMK 82
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1824665961  83 SSNLMIWTSTTLFFILILLGGLYHEWKQGALQW 115
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-117 6.34e-40

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 128.82  E-value: 6.34e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665961   1 MMTLLMSFMISFLVPMLIMLLATILSKKMINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVII 80
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1824665961  81 MKSSNLMIWTSTTLFFILILLGGLYHEWKQGALQWAE 117
Cdd:MTH00148   81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-117 1.65e-37

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 122.79  E-value: 1.65e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665961   1 MMTLLMSFMISFLVPMLIMLLATILSKKMINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVII 80
Cdd:MTH00202    1 MLLILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1824665961  81 MKSSNLMIWTSTTLFFILILLGGLYHEWKQGALQWAE 117
Cdd:MTH00202   81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-116 4.79e-34

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 114.19  E-value: 4.79e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665961   1 MMTLLMSFMISFLVPMLIMLLATILSKKMINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVII 80
Cdd:MTH00012    1 MSLMMIPMMISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1824665961  81 MKSSNLMIWTSTTLFFILILLGGLYHEWKQGALQWA 116
Cdd:MTH00012   81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 2-117 1.46e-30

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 105.02  E-value: 1.46e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665961   2 MTLLMSFMISFLVPMLIMLLATILSKKMINdREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVIIM 81
Cdd:MTH00106    1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIY-SEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1824665961  82 KSSNLMIWTSTTLFFILILLGGLYHEWKQGALQWAE 117
Cdd:MTH00106   80 QTNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-117 4.68e-29

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 101.21  E-value: 4.68e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665961   1 MMTLLMSFMISFLVPMLIMLLATILSKKMInDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVII 80
Cdd:MTH00042    1 MTNLIFFLLIILILTSLLLLAGHFLPSRSP-DLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPA 79

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1824665961  81 MKSSNLMIWTSTTLFFILILLGGLYHEWKQGALQWAE 117
Cdd:MTH00042   80 TLITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 2-116 9.03e-28

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 98.03  E-value: 9.03e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665961   2 MTLLMSFMISFLVPMLIMLLATILSKkMINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVIIM 81
Cdd:MTH00113    1 MNLISMLTISLALSTILTTLNFWLTQ-TKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAI 79

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1824665961  82 KSSNLMIWTSTTLFFILILLGGLYHEWKQGALQWA 116
Cdd:MTH00113   80 NLTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 2-117 5.26e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 96.14  E-value: 5.26e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665961   2 MTLLMSFMISFLVPMLIMLLATILSKKMINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPI---V 78
Cdd:MTH00136    1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLpwgD 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 1824665961  79 IIMKSSNLMIWTSTtlffILILLG-GLYHEWKQGALQWAE 117
Cdd:MTH00136   81 QLPSPLLTFFWATA----VLILLTlGLIYEWLQGGLEWAE 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 5.29e-27

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 95.18  E-value: 5.29e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665961  19 MLLATILSKKmINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVIIMKsSNLMIWTSTTLFFIL 98
Cdd:pfam00507   1 LLLSRLLGPK-RPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR-ELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 1824665961  99 ILLGGLYHEWKQGALQ 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 16-117 2.61e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 91.59  E-value: 2.61e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665961  16 MLIMLLATILSKKMIN----------DREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPI---VIIMK 82
Cdd:MTH00069    3 MLMLLISTILSLILITisfwlplnnpDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTpwaSQLNT 82

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1824665961  83 SSNLMIWTSTtlffILILLG-GLYHEWKQGALQWAE 117
Cdd:MTH00069   83 PTNTLFWSTL----ILILLTlGLIYEWIQGGLEWAE 114
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 2-115 9.05e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 90.34  E-value: 9.05e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665961   2 MTLLMSFMISFLVPMLIMLLATILSKKMINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVIIM 81
Cdd:MTH00203    1 MNLIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSN 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1824665961  82 KSSNLMIWTSTtlFFILILLGGLYHEWKQGALQW 115
Cdd:MTH00203   81 QLSSLSLLLAF--LFLILLTLGLIYEWLQGGLEW 112
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 2-115 8.33e-24

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 87.87  E-value: 8.33e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665961   2 MTLLMSFMISFLVPMLIMLLATILSKKMiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVIIM 81
Cdd:COG0838     6 LPILIFLLVALGLALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVF 84

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1824665961  82 KSSNLMIWTStTLFFILILLGGLYHEWKQGALQW 115
Cdd:COG0838    85 RELGWFGLIE-MLVFIAILLVGLIYAWKKGALEW 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 4-116 3.20e-23

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 86.46  E-value: 3.20e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665961   4 LLMSFMISFLVPMLIMLLATILSKKMiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILP-IVIIMK 82
Cdd:PRK06602   11 FLIFLIVAIGLGILLLVAGKLLGPRA-PDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPwAVSFRE 89

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1824665961  83 SSNLMIWTSttLFFILILLGGLYHEWKQGALQWA 116
Cdd:PRK06602   90 IGWLGFVEA--MIFILVLLVGLVYLWRKGALDWE 121
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 2-115 2.29e-18

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 73.94  E-value: 2.29e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665961   2 MTLLMSFMISFLVPMLIMLLATILSKKmINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVIIM 81
Cdd:MTH00018    1 YGLFILLIFSVVLSALFSGASYFLGVK-QPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLY 79

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1824665961  82 KSSNLM-IWTSTTLFFILILlgGLYHEWKQGALQW 115
Cdd:MTH00018   80 NQIAPFgFWTMVGFLFILTL--GLIYEWIKGGLEW 112
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 32-115 1.43e-17

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 72.05  E-value: 1.43e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665961  32 DREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVIIMKSSNLM-IWtsTTLFFILILLGGLYHEWKQ 110
Cdd:MTH00055   35 DSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGLFgFW--VMYLFLIILTIGLIYEWVK 112


                  ....*
gi 1824665961 111 GALQW 115
Cdd:MTH00055  113 GGLEW 117
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 3-115 9.42e-15

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 64.95  E-value: 9.42e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665961   3 TLLMSFMISFLVPMLIMLLATILSKKMIN----DREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIV 78
Cdd:MTH00030    7 TIFFSTLLGVGIILLLVSISFTLGNSRIGltkpDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWS 86

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1824665961  79 IIMKSSNLM-IWTSTTlfFILILLGGLYHEWKQGALQW 115
Cdd:MTH00030   87 IVFNQLNLFsFWIVYT--FLIVLAIGLAYEWIKGGLEW 122
ndhC CHL00022
NADH dehydrogenase subunit 3
 7-115 9.09e-11

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 54.61  E-value: 9.09e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665961   7 SFMISFLVPMLIMLLATILSKKMINDR---EKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVIIMKS 83
Cdd:CHL00022    9 IFWAFLIISSLIPILAFLISGLLAPISkgpEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDV 88

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1824665961  84 SNLMIWTSTtLFFILILLGGLYHEWKQGALQW 115
Cdd:CHL00022   89 LGVSAFIEA-LIFVLILIVGLVYAWRKGALEW 119
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
8-115 3.13e-10

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 53.52  E-value: 3.13e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665961   8 FMISFLVPMLIMLLATILSKKMIN---DREKSSPFECGFDPKSSARMpFSLRFFLIAVIFLIFDIEIALILPIVIIMKSS 84
Cdd:PRK08489   17 LVLTFVAFFLTTRLARFISRKLAQkntEKLKLAIYECGPEPVKQPNR-ISSHFYIMALLFILFDVEIVFMFPWAVDFKLL 95

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1824665961  85 NLMIWTStTLFFILILLGGLYHEWKQGALQW 115
Cdd:PRK08489   96 GLFGLIE-MLLFIVLLTIGFIYAWKKGALEW 125
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
32-115 1.26e-08

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 48.97  E-value: 1.26e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665961  32 DREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVIIMKSSNLMIWTStTLFFILILLGGLYHEWKQG 111
Cdd:PRK07756   39 SAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYDKLGLFALIE-MLIFVVMLLVGLAYAWKKK 117


                  ....
gi 1824665961 112 ALQW 115
Cdd:PRK07756  118 VLQW 121
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 19-115 7.73e-08

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 46.97  E-value: 7.73e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665961  19 MLLATILSKKMINdREKSSPFECGFDPKSSARMP--FSLRFFLIAVIFLIFDIEIALILPIVIIMKSSNLMIWTSTTLFF 96
Cdd:PRK07928   22 VVVASLVGPKRYN-RAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYPWAVSFDALGVFGLVEMALFM 100

                          90
                  ....*....|....*....
gi 1824665961  97 ILILLGGLYhEWKQGALQW 115
Cdd:PRK07928  101 LTVFVAYAY-VWRRGGLEW 118
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-115 4.80e-07

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 44.88  E-value: 4.80e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665961   1 MMTLLMSFMISFLVPMLIMLLATILSKKMiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVII 80
Cdd:MTH00092    1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKK-FDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVS 79

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1824665961  81 MKSSNLMIWtsttlFFILILLGGLYHEWKQGALQW 115
Cdd:MTH00092   80 DFSSLISFF-----MLMIFIFFGFYMEWWYGKLIW 109
PRK06432 PRK06432
NADH dehydrogenase subunit A; Validated
 32-115 2.57e-04

NADH dehydrogenase subunit A; Validated


Pssm-ID: 102372  Cd Length: 144  Bit Score: 37.87  E-value: 2.57e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665961  32 DREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVIIMKSSNLMIWTSTTLFFILILLgGLYHEWKQG 111
Cdd:PRK06432   60 DQSYLEPYESGEVAREIWGGPSINQYYIVVLLFVVFDVDMLLLFPWAFDFKRLGLIPFIETLIFLAMPLF-AVYYAFKMG 138


                  ....
gi 1824665961 112 ALQW 115
Cdd:PRK06432  139 YMRW 142
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 1-115 2.72e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 37.57  E-value: 2.72e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665961   1 MMTLLMSFMISFLVPMLIMLLATIL--SKKMINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIV 78
Cdd:MTH00060    1 MLVLLFVFFVFFLLFLVIYFFHSGLwnNKIYSGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1824665961  79 IIMKSSNLMIWtstTLFFILILLGGLYHEWKQGALQW 115
Cdd:MTH00060   81 FQGLLFYNFWY---YYFFLLLLFLGFVVELFSGYVRW 114
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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