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Conserved domains on  [gi|1842004024|ref|YP_009791415|]
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hypothetical protein HOR89_gp036 [Synechococcus phage Bellamy]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2973 super family cl12738
Protein of unknown function (DUF2973); Some members in this family of proteins are annotated ...
 33-59 8.94e-03

Protein of unknown function (DUF2973); Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently they have no known function.


The actual alignment was detected with superfamily member pfam11189:

Pssm-ID: 431712  Cd Length: 68  Bit Score: 31.37  E-value: 8.94e-03
                         10        20
                 ....*....|....*....|....*..
gi 1842004024 33 QTQPVYTHPEMFDANGNVLPDEILAVR 59
Cdd:pfam11189 42 RTGQVTPHPELLDEDGNLIDEPLLVMR 68
 
Name Accession Description Interval E-value
DUF2973 pfam11189
Protein of unknown function (DUF2973); Some members in this family of proteins are annotated ...
 33-59 8.94e-03

Protein of unknown function (DUF2973); Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently they have no known function.


Pssm-ID: 431712  Cd Length: 68  Bit Score: 31.37  E-value: 8.94e-03
                         10        20
                 ....*....|....*....|....*..
gi 1842004024 33 QTQPVYTHPEMFDANGNVLPDEILAVR 59
Cdd:pfam11189 42 RTGQVTPHPELLDEDGNLIDEPLLVMR 68
 
Name Accession Description Interval E-value
DUF2973 pfam11189
Protein of unknown function (DUF2973); Some members in this family of proteins are annotated ...
 33-59 8.94e-03

Protein of unknown function (DUF2973); Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently they have no known function.


Pssm-ID: 431712  Cd Length: 68  Bit Score: 31.37  E-value: 8.94e-03
                         10        20
                 ....*....|....*....|....*..
gi 1842004024 33 QTQPVYTHPEMFDANGNVLPDEILAVR 59
Cdd:pfam11189 42 RTGQVTPHPELLDEDGNLIDEPLLVMR 68
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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