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Conserved domains on  [gi|1919576801|ref|YP_009944116|]
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NADH dehydrogenase subunit 4L (mitochondrion) [Dicrurus megarhynchus]

Protein Classification

ND4L family protein( domain architecture ID 10009575)

ND4L family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-98 4.86e-40

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 177184  Cd Length: 98  Bit Score: 127.65  E-value: 4.86e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919576801  1 MSILHLSFYSAFTLSSLGLAFHRSHLISALLCLESMMLSLYIALSMWPIQTQSSSHTLLPILMLSFSACEAATGLALLVA 80
Cdd:MTH00125   1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80

                         90
                 ....*....|....*...
gi 1919576801 81 STRTHGSDHLHNFNLLQC 98
Cdd:MTH00125  81 TTRTHGSDHLKNLNLLQC 98
 
Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-98 4.86e-40

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 127.65  E-value: 4.86e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919576801  1 MSILHLSFYSAFTLSSLGLAFHRSHLISALLCLESMMLSLYIALSMWPIQTQSSSHTLLPILMLSFSACEAATGLALLVA 80
Cdd:MTH00125   1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80

                         90
                 ....*....|....*...
gi 1919576801 81 STRTHGSDHLHNFNLLQC 98
Cdd:MTH00125  81 TTRTHGSDHLKNLNLLQC 98
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
3-98 2.69e-13

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 59.89  E-value: 2.69e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919576801  3 ILHLSFYSAFTLSSLGLAFhRSHLISALLCLESMMLSLYIALSMWPIQTQSSSHTLLPILMLSFSACEAATGLALLVAST 82
Cdd:pfam00420  1 AYLLLSGLLFLIGLYGLLL-RRNLLRVLLSLELMLNAVNLALVLFGRLTADPLPQALILTAIVIAAAEAAVGLALLVRIY 79

                         90
                 ....*....|....*.
gi 1919576801 83 RTHGSDHLHNFNLLQC 98
Cdd:pfam00420 80 RTHGTDDVDSLNLLKG 95
NuoK COG0713
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; ...
 1-96 5.28e-04

NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440477  Cd Length: 99  Bit Score: 35.81  E-value: 5.28e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919576801  1 MSILHLSFYSAFtLSSLGL--AFHRSHLISALLCLESMMLSLYIAL-SMWPIQTQSSSHTLLpILMLSFSACEAATGLAL 77
Cdd:COG0713    1 IPLEHYLILAAI-LFAIGLygVLTRRNLIVVLMSIELMLNAVNLNLvAFSRYLGDLDGQVFA-LFVIAVAAAEVAVGLAI 78

                         90
                 ....*....|....*....
gi 1919576801 78 LVASTRTHGSDHLHNFNLL 96
Cdd:COG0713   79 IVALYRNRGTIDVDDLNEL 97
 
Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-98 4.86e-40

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 127.65  E-value: 4.86e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919576801  1 MSILHLSFYSAFTLSSLGLAFHRSHLISALLCLESMMLSLYIALSMWPIQTQSSSHTLLPILMLSFSACEAATGLALLVA 80
Cdd:MTH00125   1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80

                         90
                 ....*....|....*...
gi 1919576801 81 STRTHGSDHLHNFNLLQC 98
Cdd:MTH00125  81 TTRTHGSDHLKNLNLLQC 98
ND4L MTH00067
NADH dehydrogenase subunit 4L; Provisional
 1-98 1.30e-37

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177139  Cd Length: 98  Bit Score: 121.63  E-value: 1.30e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919576801  1 MSILHLSFYSAFTLSSLGLAFHRSHLISALLCLESMMLSLYIALSMWPIQTQSSSHTLLPILMLSFSACEAATGLALLVA 80
Cdd:MTH00067   1 MSPTYFTFYSAFLLGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWSTQFESLSYFSLPMFMLTFSACEASTGLALMVA 80

                         90
                 ....*....|....*...
gi 1919576801 81 STRTHGSDHLHNFNLLQC 98
Cdd:MTH00067  81 TTRTHGTDHLKNLNLLQC 98
ND4L MTH00126
NADH dehydrogenase subunit 4L; Provisional
 1-98 2.91e-37

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177185  Cd Length: 98  Bit Score: 120.84  E-value: 2.91e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919576801  1 MSILHLSFYSAFTLSSLGLAFHRSHLISALLCLESMMLSLYIALSMWPIQTQSSSHTLLPILMLSFSACEAATGLALLVA 80
Cdd:MTH00126   1 MTPVHFSFSSAFILGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWALQLESTSFSAAPMLLLAFSACEASAGLALLVA 80

                         90
                 ....*....|....*...
gi 1919576801 81 STRTHGSDHLHNFNLLQC 98
Cdd:MTH00126  81 TARTHGTDRLQNLNLLQC 98
ND4L MTH00107
NADH dehydrogenase subunit 4L; Provisional
 1-98 5.50e-25

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177169  Cd Length: 98  Bit Score: 89.60  E-value: 5.50e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919576801  1 MSILHLSFYSAFTLSSLGLAFHRSHLISALLCLESMMLSLYIALSMWPIQTQSSSHTLLPILMLSFSACEAATGLALLVA 80
Cdd:MTH00107   1 MSLIYMNIMLAFTISLLGLLMYRSHLMSSLLCLEGMMLSLFIMATLTILNTHFTLASMMPIILLVFAACEAAVGLALLVM 80

                         90
                 ....*....|....*...
gi 1919576801 81 STRTHGSDHLHNFNLLQC 98
Cdd:MTH00107  81 VSNTYGTDYVQNLNLLQC 98
ND4L MTH00181
NADH dehydrogenase subunit 4L; Provisional
 4-96 2.94e-20

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214450  Cd Length: 93  Bit Score: 77.68  E-value: 2.94e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919576801  4 LHLSFYSAFTLSSLGLAFHRSHLISALLCLESMMLSLYIALSMWPIQTQSSSHTLLPILMLSFSACEAATGLALLVASTR 83
Cdd:MTH00181   1 MMFVFISAFILLLLGLSLYKTHLLSLLLCLEGMMLFLFLLLALFSLLSSSSSMLMFGLILLTFSACEAVLGLSLLVATNR 80

                         90
                 ....*....|...
gi 1919576801 84 THGSDHLHNFNLL 96
Cdd:MTH00181  81 THGSDHLLKFNLL 93
ND4L MTH00043
NADH dehydrogenase subunit 4L; Validated
 1-97 2.02e-13

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 214410  Cd Length: 98  Bit Score: 60.32  E-value: 2.02e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919576801  1 MSILHLSFYSAFTLSSLGLAFHRSHLISALLCLESMMLSLYIALSMWPIQTQSSSHTLLPILMLSFSACEAATGLALLVA 80
Cdd:MTH00043   1 MNIILIIILSSFFLGLLGILINRLHLLSILLCLELLLISLFLNISIWSLNYGNFSNLSFSLLLLTLSACEASIGLSLMVL 80

                         90
                 ....*....|....*..
gi 1919576801 81 STRTHGSDHLHNFNLLQ 97
Cdd:MTH00043  81 LSRNHNSDLVASLNLLQ 97
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
3-98 2.69e-13

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 59.89  E-value: 2.69e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919576801  3 ILHLSFYSAFTLSSLGLAFhRSHLISALLCLESMMLSLYIALSMWPIQTQSSSHTLLPILMLSFSACEAATGLALLVAST 82
Cdd:pfam00420  1 AYLLLSGLLFLIGLYGLLL-RRNLLRVLLSLELMLNAVNLALVLFGRLTADPLPQALILTAIVIAAAEAAVGLALLVRIY 79

                         90
                 ....*....|....*.
gi 1919576801 83 RTHGSDHLHNFNLLQC 98
Cdd:pfam00420 80 RTHGTDDVDSLNLLKG 95
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 6-98 4.30e-10

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 51.51  E-value: 4.30e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919576801  6 LSFYSAFTLSSLGLAFHRSHLISALLCLESMMLSLYIALSMWPIQTQSssHTLLPILMLSFSACEAATGLALLVASTRTH 85
Cdd:MTH00188   7 LVILLFVVLGLFTFLLNRKHLLMLLLSLEAIMLSLFWFLLVGLSYMEK--ELYLSLVLLTFAACEASVGLALLVSLIRSH 84

                         90
                 ....*....|...
gi 1919576801 86 GSDHLHNFNLLQC 98
Cdd:MTH00188  85 GSDYVSSLNLIKC 97
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 1-98 5.48e-08

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 46.38  E-value: 5.48e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919576801  1 MSILHLSFYSAFTLSSLGLAFHRSHLISALLCLESMMLSLYIALSMWPIQTQSSSHTLLpiLMLSFSACEAATGLALLVA 80
Cdd:MTH00149   2 MFMLLLLSLFGFLMGVFALLFQYKHLLSILLSLEALMLSLLVMMFSSSGLISFSSYLFL--IILTFGACEASLGLSLLVS 79

                         90
                 ....*....|....*...
gi 1919576801 81 STRTHGSDHLHNFNLLQC 98
Cdd:MTH00149  80 LIRLHGNDYVSSLSSLKF 97
ND4L MTH00180
NADH dehydrogenase subunit 4L; Provisional
 12-97 3.76e-07

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177231  Cd Length: 99  Bit Score: 44.25  E-value: 3.76e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919576801 12 FTLSSLGLAFHRSHLISALLCLESMMLSLYIALSMWPIQTQSSSHTLLPILMLSFSACEAATGLALLVASTRTHGSDHLH 91
Cdd:MTH00180  13 FILGVLGIVLNRSNLIIMLMSIELMLLAISLLFLINSVAIDNLIGQIFTIMILTVAAAESAIGLAILVAYYRIRGTIAVK 92


                 ....*.
gi 1919576801 92 NFNLLQ 97
Cdd:MTH00180  93 SLNLLR 98
ND4L MTH00013
NADH dehydrogenase subunit 4L; Validated
 1-98 1.67e-06

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 133655  Cd Length: 97  Bit Score: 42.43  E-value: 1.67e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919576801  1 MSILHLSFYSAFTLSSLGLAFHRSHLISALLCLESMMLSLYIaLSMWPIQTQSSSHTLLPILMLSFSACEAATGLALLVA 80
Cdd:MTH00013   1 MMSPLFILSISPFISMFNLSLQRKHLLMSLLSLEAMILSLAL-FIPLSLMFANQVNGMLAIVLLTFGACEASLGLSLLVL 79

                         90
                 ....*....|....*...
gi 1919576801 81 STRTHGSDHLHNFNLLQC 98
Cdd:MTH00013  80 MTRSYGNDMLKSLTSNKC 97
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 12-92 4.72e-06

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 40.91  E-value: 4.72e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919576801 12 FTLSSLGLAFHRSHLISALLCLESMMLSLYIALSMwpIQTQSSSHTLLPILMLSFSACEAATGLALLVASTRTHGSDHLH 91
Cdd:MTH00162  11 FFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFL--YLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSHGNDYFS 88


                 .
gi 1919576801 92 N 92
Cdd:MTH00162  89 S 89
ND4L MTH00001
NADH dehydrogenase subunit 4L; Provisional
 12-97 3.44e-05

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177099  Cd Length: 99  Bit Score: 38.89  E-value: 3.44e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919576801 12 FTLSSLGLAFHRSHLISALLCLESMMLSLYIALSMWPIQTQSSSHTLLPILMLSFSACEAATGLALLVASTRTHGSDHLH 91
Cdd:MTH00001  13 FLLGIWGIILNRGHFIIMLVSIELVLLSTFFLFLINSIEIDLLIEQIFTIMGLTIAAAESAIGLAIMVAYYRIRGTISLK 92


                 ....*.
gi 1919576801 92 NFNLLQ 97
Cdd:MTH00001  93 SLNSLR 98
PRK05715 PRK05715
NADH-quinone oxidoreductase subunit NuoK;
1-96 7.49e-05

NADH-quinone oxidoreductase subunit NuoK;


Pssm-ID: 180218  Cd Length: 100  Bit Score: 38.23  E-value: 7.49e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919576801   1 MSILHLSFYSA--FTLSSLGLaFHRSHLISALLCLESMMLSLYIALSMWPIQTQSSSHTLLPILMLSFSACEAATGLALL 78
Cdd:PRK05715    2 IPLQHYLILAAilFCIGLVGL-LLRRNAIVVLMSIELMLNAVNLNFVAFSSYLGDLDGQVFAFFVITVAAAEAAIGLAIL 80

                          90
                  ....*....|....*...
gi 1919576801  79 VASTRTHGSDHLHNFNLL 96
Cdd:PRK05715   81 LQLYRNRGTIDVDDLNEL 98
NuoK COG0713
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; ...
 1-96 5.28e-04

NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440477  Cd Length: 99  Bit Score: 35.81  E-value: 5.28e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919576801  1 MSILHLSFYSAFtLSSLGL--AFHRSHLISALLCLESMMLSLYIAL-SMWPIQTQSSSHTLLpILMLSFSACEAATGLAL 77
Cdd:COG0713    1 IPLEHYLILAAI-LFAIGLygVLTRRNLIVVLMSIELMLNAVNLNLvAFSRYLGDLDGQVFA-LFVIAVAAAEVAVGLAI 78

                         90
                 ....*....|....*....
gi 1919576801 78 LVASTRTHGSDHLHNFNLL 96
Cdd:COG0713   79 IVALYRNRGTIDVDDLNEL 97
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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