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Conserved domains on  [gi|1980524905|ref|YP_009989159|]
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ATP synthase F0 subunit 6 (mitochondrion) [Epacromius coerulipes]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 4.20e-99

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 287.06  E-value: 4.20e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905   1 MMTNLFSTFDPSTNiFNLSLNWTSTFLGLLLIPSMFWLMPSRINILWNKMNLNLHNEFKTLLGMNsFNGSTFIFISIFIM 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905  81 MMFNNFMGLFPYIFTSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFTHLVPQGTPTALMSFMVMIETISNIIRPGTLAV 160
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1980524905 161 RLAANMIAGHLLLTLLGNTGPSLTVSFMLILITGQTVLLILESAVAVIQAYVFSILSTLYSSEVY 225
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 4.20e-99

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 287.06  E-value: 4.20e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905   1 MMTNLFSTFDPSTNiFNLSLNWTSTFLGLLLIPSMFWLMPSRINILWNKMNLNLHNEFKTLLGMNsFNGSTFIFISIFIM 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905  81 MMFNNFMGLFPYIFTSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFTHLVPQGTPTALMSFMVMIETISNIIRPGTLAV 160
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1980524905 161 RLAANMIAGHLLLTLLGNTGPSLTVSFMLILITGQTVLLILESAVAVIQAYVFSILSTLYSSEVY 225
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-225 6.08e-44

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 146.97  E-value: 6.08e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905   5 LFSTFDPST-NIFNLSLNWTSTFLGLLLIPSMF----WLMPSRINILWNKMNLNLHNEFKTLLGMNSFNGSTFIFiSIFI 79
Cdd:TIGR01131   1 LFSQFDISPiTLFSLTLLSLILLLSLLIFLISSslsrWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIF-TLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905  80 MMMFNNFMGLFPYIFTSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFTHLVPQGTPTALMSFMVMIETISNIIRPGTLA 159
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1980524905 160 VRLAANMIAGHLLLTLLGNTGPSLT-VSFMLILITGQTVLLILESAVAVIQAYVFSILSTLYSSEVY 225
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLMsSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 67-222 1.63e-39

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 133.29  E-value: 1.63e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905  67 FNGSTFIFISIFIMMMFNNFMGLFPYIFTSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFTHLVPQGTPTALMSFMVMI 146
Cdd:cd00310     1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1980524905 147 ETISNIIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLTVSFMLILITGQTVLLILESAVAVIQAYVFSILSTLYSS 222
Cdd:cd00310    81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP-synt_A pfam00119
ATP synthase A chain;
74-222 1.21e-21

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 88.70  E-value: 1.21e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905  74 FISIFIMMMFNNFMGLF---PYIFTSTSHMTLTFTIALPMWMSFMLFG-WINNTNHMFTHLVPQGTPTALMSFMVMIETI 149
Cdd:pfam00119  61 LLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYGiKKHGLGGYFKKLFVPPVPLPLVPLLLPIEII 140

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1980524905 150 SNIIRPGTLAVRLAANMIAGH---LLLTLLGNTGPSLTVSFMLILITGQTVLLILESAVAVIQAYVFSILSTLYSS 222
Cdd:pfam00119 141 SEFARPVSLSLRLFGNMLAGHlllLLLAGLIFALLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 76-220 8.42e-19

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 80.89  E-value: 8.42e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905  76 SIFIMMMFNNFMGLFPYIFTSTSHMTLTFTIALPMWMSFMLFG-WINNTNHMFTHLVPQGTPtALMSFMVMIETISNIIR 154
Cdd:COG0356    63 TLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGiKKKGLGGYLKHLFFPPFP-WLAPLMLPIEIISELAR 141

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1980524905 155 PGTLAVRLAANMIAGHLLLTLLGNTGPSLTVSFMLILITgqTVLLILESAVAVIQAYVFSILSTLY 220
Cdd:COG0356   142 PLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLLP--VAWTAFELLVGFLQAYIFTMLTAVY 205
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 4.20e-99

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 287.06  E-value: 4.20e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905   1 MMTNLFSTFDPSTNiFNLSLNWTSTFLGLLLIPSMFWLMPSRINILWNKMNLNLHNEFKTLLGMNsFNGSTFIFISIFIM 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905  81 MMFNNFMGLFPYIFTSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFTHLVPQGTPTALMSFMVMIETISNIIRPGTLAV 160
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1980524905 161 RLAANMIAGHLLLTLLGNTGPSLTVSFMLILITGQTVLLILESAVAVIQAYVFSILSTLYSSEVY 225
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 1-225 8.60e-52

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 167.13  E-value: 8.60e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905   1 MMTNLFSTFDP-STNIFN-LSLNWTSTFLGLLLIPSMFWLMPSRINILWNKMNlNLHNEFKTLLGMNSFNGSTFIFISIF 78
Cdd:MTH00176    1 MLVDLFSSFDPpNKNIFSmISLSWITLLLFLLLMPSSVWFCPSKLQVFMLMFS-TFLPEMILRSNGSYILGSASIIISLF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905  79 IMMMFNNFMGLFPYIFTSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFTHLVPQGTPTALMSFMVMIETISNIIRPGTL 158
Cdd:MTH00176   80 ILVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTL 159

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1980524905 159 AVRLAANMIAGHLLLTLLGNTGPSLT----VSFMLILITgQTVLLILESAVAVIQAYVFSILSTLYSSEVY 225
Cdd:MTH00176  160 AVRLAANLSAGHLLLGLLGAAMWGLLpvspLIGFLLLIV-QILYFMFEIAVCMIQAYVFTLLLSLYLDEHP 229
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-225 6.08e-44

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 146.97  E-value: 6.08e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905   5 LFSTFDPST-NIFNLSLNWTSTFLGLLLIPSMF----WLMPSRINILWNKMNLNLHNEFKTLLGMNSFNGSTFIFiSIFI 79
Cdd:TIGR01131   1 LFSQFDISPiTLFSLTLLSLILLLSLLIFLISSslsrWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIF-TLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905  80 MMMFNNFMGLFPYIFTSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFTHLVPQGTPTALMSFMVMIETISNIIRPGTLA 159
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1980524905 160 VRLAANMIAGHLLLTLLGNTGPSLT-VSFMLILITGQTVLLILESAVAVIQAYVFSILSTLYSSEVY 225
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLMsSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 67-222 1.63e-39

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 133.29  E-value: 1.63e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905  67 FNGSTFIFISIFIMMMFNNFMGLFPYIFTSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFTHLVPQGTPTALMSFMVMI 146
Cdd:cd00310     1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1980524905 147 ETISNIIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLTVSFMLILITGQTVLLILESAVAVIQAYVFSILSTLYSS 222
Cdd:cd00310    81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 3-223 8.33e-39

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 133.95  E-value: 8.33e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905   3 TNLFSTFDPSTnIFNLSLNWTSTFLGL---LLIPSMFWLmPSRINILWNKMNLNLhneFKTLLGMNSFNGSTFI--FISI 77
Cdd:MTH00035    5 NSIFGQFSPDT-ILFIPLTLLSSVIALswlFFINPTNWL-PSRSQSIWLTFRQEI---LKLIFQNTNPNTAPWAglLTTV 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905  78 FIMMMFNNFMGLFPYIFTSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFTHLVPQGTPTALMSFMVMIETISNIIRPGT 157
Cdd:MTH00035   80 FILILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIA 159

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 158 LAVRLAANMIAGHLLLTLLGNT----GPSLTVSFMLILITGqtVLLILESAVAVIQAYVFSILSTLYSSE 223
Cdd:MTH00035  160 LGLRLAANLTAGHLLIFLLSTAiwelSNSPLISIITLIIFF--LLFILEIGVACIQAYVFTALVHFYLEQ 227
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 1-223 2.23e-38

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 132.93  E-value: 2.23e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905   1 MMTNLFSTFDPSTNIFNLSLN----WTSTFLGLLLIPSMFWLMPSRINILWNKMNLNLHNEFKTLLGMNsFNGSTFIFIS 76
Cdd:MTH00005    1 MLTDIFSSFDPATNSLFNNLSstafWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFGKH-LKGFSSLISA 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905  77 IFIMMMFNNFMGLFPYIFTSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFTHLVPQGTPTALMSFMVMIETISNIIRPG 156
Cdd:MTH00005   80 LFTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPI 159

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1980524905 157 TLAVRLAANMIAGHLLLTLLGNTGPSL----TVSFMLILITgQTVLLILESAVAVIQAYVFSILSTLYSSE 223
Cdd:MTH00005  160 TLSFRLAANMSAGHIVLSLIGIYAASAlfssISSTILLILT-QMGYILFEVGICLIQAYIFCLLLSLYSDD 229
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 1-223 7.57e-37

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 128.83  E-value: 7.57e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905   1 MMTNLFSTFDPSTNIFNL--SLNWTSTFLGLLLIPSMFWLMPSRINILWNKMNLNLHNEFKTLLGMNsFNGSTFIFISIF 78
Cdd:MTH00173    1 MMVDLFSSFDDHNSSFSSlsFLMWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSGLN-LGGFSLLLSSLF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905  79 IMMMFNNFMGLFPYIFTSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFTHLVPQGTPTALMSFMVMIETISNIIRPGTL 158
Cdd:MTH00173   80 LFLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTL 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1980524905 159 AVRLAANMIAGHLLLTLLGNTGPSLTVS----FMLILITGQTVLLILESAVAVIQAYVFSILSTLYSSE 223
Cdd:MTH00173  160 TVRLLANISAGHIVLTLIGNYLSSSLFSssvvSLLLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 1-223 1.59e-30

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 112.23  E-value: 1.59e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905   1 MMTNLFSTFDPSTNIFnlslnwTSTFLGLLLIPSMFWLMPS---RINILWNKMNLNLHNEFKTLLGMNSFNGS--TFIFI 75
Cdd:MTH00120    1 MNLNFFDQFSSPELLG------IPLILLAMLIPALLIPSPKnrlLTNRLTTLQLWLIKLITKQLMLPLNKKGHkwALILT 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905  76 SIFIMMMFNNFMGLFPYIFTSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFTHLVPQGTPTALMSFMVMIETISNIIRP 155
Cdd:MTH00120   75 SLMLLLLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRP 154

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1980524905 156 GTLAVRLAANMIAGHLLLTLLGNTGPSLTVSFMLILITGQTVLL---ILESAVAVIQAYVFSILSTLYSSE 223
Cdd:MTH00120  155 LALGVRLTANLTAGHLLIQLISTATLNLLPTMPTLSLLTLIILLlltILELAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 1-223 7.74e-30

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 110.42  E-value: 7.74e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905   1 MMTNLFSTFDpSTNIFNLSLNWTSTFLGLLLIPS-------------MFWLMPSRINILWNKMNLNLHNEFktllgmnsf 67
Cdd:MTH00179    1 MMLSMFDQFE-SPSLLGIPLLALALLLPWLLFPSltnrwlnnrlstlQSWFFGSFTFQLMQPINKKGHKWA--------- 70

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905  68 ngstFIFISIFIMMMFNNFMGLFPYIFTSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFTHLVPQGTPTALMSFMVMIE 147
Cdd:MTH00179   71 ----VLFLSLMLFLLTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIE 146

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1980524905 148 TISNIIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLTVSFMLILITGQTV---LLILESAVAVIQAYVFSILSTLYSSE 223
Cdd:MTH00179  147 TISLLIRPLALGVRLTANITAGHLLMHLISSAVFVLMNFMGMVALLTLLVlflLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 73-223 1.42e-29

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 109.96  E-value: 1.42e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905  73 IFISIFIMMMFNNFMGLFPYIFTSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFTHLVPQGTPTALMSFMVMIETISNI 152
Cdd:MTH00132   72 LLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLF 151

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1980524905 153 IRPGTLAVRLAANMIAGHLLLTLLGNTGPSLTVSFMLILITGQTVLL---ILESAVAVIQAYVFSILSTLYSSE 223
Cdd:MTH00132  152 IRPLALGVRLTANLTAGHLLIQLIATAAFVLLPLMPTVAILTATLLFlltLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 1-220 9.98e-29

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 107.73  E-value: 9.98e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905   1 MMTNLFSTFDPSTnIFNLSLNWTSTFLGLLLIPSMFWLMPSRINILwnKMNLnLHNEFKTLLGMNSFNGSTF--IFISIF 78
Cdd:MTH00101    1 MNENLFASFITPT-ILGLPIVTLIIMFPSLLFPTPNRLINNRLISI--QQWL-IQLTSKQMMTIHNTKGQTWslMLMSLI 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905  79 IMMMFNNFMGLFPYIFTSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFTHLVPQGTPTALMSFMVMIETISNIIRPGTL 158
Cdd:MTH00101   77 LFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMAL 156

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1980524905 159 AVRLAANMIAGHLLLTLLGNTGPSL-TVSFMLILITGQTVLL--ILESAVAVIQAYVFSILSTLY 220
Cdd:MTH00101  157 AVRLTANITAGHLLIHLIGGATLALmSISTTTALITFIILILltILEFAVALIQAYVFTLLVSLY 221
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 1-223 1.72e-27

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 104.28  E-value: 1.72e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905   1 MMTNLFSTFDPSTnIFNLSLNWTSTFLGLLLI--PSMFWLmPSRINILWNKMNLNLHNEFKTLLGMNSFNGStFIFISIF 78
Cdd:MTH00073    1 MNLSFFDQFLSPT-LLGIPLIMLAMLLPWLLFptPTNKWL-NNRLSTLQIWFLQNFTKQLMLPLNTPGHKWA-LILTSLM 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905  79 IMMMFNNFMGLFPYIFTSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFTHLVPQGTPTALMSFMVMIETISNIIRPGTL 158
Cdd:MTH00073   78 VFLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPLAL 157

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1980524905 159 AVRLAANMIAGHLLLTLLGNTGPSLTVSFMLILITGQTVLL---ILESAVAVIQAYVFSILSTLYSSE 223
Cdd:MTH00073  158 GVRLTANLTAGHLLIQLISTATLVLLPLMPTVSILTMIVLFlltLLEIAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 15-220 2.46e-23

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 93.57  E-value: 2.46e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905  15 IFNLSLNWTSTFLGLLLIPSMFWLMPSRINILWNKMNLNLHNEFKTLLGMNSFNGSTFIfISIFIMMMFNNFMGLFPYIF 94
Cdd:MTH00172   17 LTNSSIMMILVIIVVLLLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFI-ISLFFFIVFLNLLGLFPYVF 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905  95 TSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFTHLVPQGTPTALMSFMVMIETISNIIRPGTLAVRLAANMIAGHLLLT 174
Cdd:MTH00172   96 TPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAANLSAGHLLFA 175

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 1980524905 175 LLGNTGPSLTVSFMLILITGQTVLL---ILESAVAVIQAYVFSILSTLY 220
Cdd:MTH00172  176 ILAGFGFNMLCASGFLSLFPLLIMVfitLLEIAVAVIQAYVFCLLTTIY 224
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 17-220 8.03e-23

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 92.38  E-value: 8.03e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905  17 NLSLNWTSTFLGLLLIPSMFWLM-------PSRINILWNKMNLNLHNEFKTLLGMNSFNGSTFIFiSIFIMMMFNNFMGL 89
Cdd:MTH00175   23 DWLVTFTNSSMMMVLAVIIFWLLlkgdkliPNRWQSIMELIYLNIRSVVHDNLGKSGQKYFPFIL-SLFLFIAILNILGL 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905  90 FPYIFTSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFTHLVPQGTPTALMSFMVMIETISNIIRPGTLAVRLAANMIAG 169
Cdd:MTH00175  102 FPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIRAISLGVRLAANISAG 181

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1980524905 170 HLLLTLLG--------NTGPSLTVSFMLILItgqtVLLILESAVAVIQAYVFSILSTLY 220
Cdd:MTH00175  182 HLLFAILSgfafnmlsNGLIILSLFPMLIMI----FITLLEMAVAVIQAYVFCLLTTIY 236
ATP-synt_A pfam00119
ATP synthase A chain;
74-222 1.21e-21

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 88.70  E-value: 1.21e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905  74 FISIFIMMMFNNFMGLF---PYIFTSTSHMTLTFTIALPMWMSFMLFG-WINNTNHMFTHLVPQGTPTALMSFMVMIETI 149
Cdd:pfam00119  61 LLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYGiKKHGLGGYFKKLFVPPVPLPLVPLLLPIEII 140

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1980524905 150 SNIIRPGTLAVRLAANMIAGH---LLLTLLGNTGPSLTVSFMLILITGQTVLLILESAVAVIQAYVFSILSTLYSS 222
Cdd:pfam00119 141 SEFARPVSLSLRLFGNMLAGHlllLLLAGLIFALLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 76-220 8.42e-19

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 80.89  E-value: 8.42e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905  76 SIFIMMMFNNFMGLFPYIFTSTSHMTLTFTIALPMWMSFMLFG-WINNTNHMFTHLVPQGTPtALMSFMVMIETISNIIR 154
Cdd:COG0356    63 TLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGiKKKGLGGYLKHLFFPPFP-WLAPLMLPIEIISELAR 141

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1980524905 155 PGTLAVRLAANMIAGHLLLTLLGNTGPSLTVSFMLILITgqTVLLILESAVAVIQAYVFSILSTLY 220
Cdd:COG0356   142 PLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLLP--VAWTAFELLVGFLQAYIFTMLTAVY 205
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 38-220 7.32e-17

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 76.90  E-value: 7.32e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905  38 LMPSRINILWNKMNLNLHNEFKTLLGMNSFNGSTFIfISIFIMMMFNNFMGLFPYIFTSTSHMTLTFTIALPMWMSFMLF 117
Cdd:MTH00174   59 LVPNRILVGLELIYSHFYTVLKDNLGNKGGNYLAFV-LSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLA 137

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 118 GWINNTNHMFTHLVPQGTPTALMSFMVMIETISNIIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLTVSFMLILITGQTV 197
Cdd:MTH00174  138 GLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMINTGILIGSFVPFA 217

                         170       180
                  ....*....|....*....|....*..
gi 1980524905 198 LL----ILESAVAVIQAYVFSILSTLY 220
Cdd:MTH00174  218 ILifvtILEMAVAIIQAYVFTLLTIVY 244
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 73-220 8.77e-15

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 70.59  E-value: 8.77e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905  73 IFISIFIMMMFNNFMGLFP-YIFTSTSHMTLTFTIALPMWMSFMLFG-WINNTNHMFTHLVPQGTPtalmsFMVMIETIS 150
Cdd:PRK05815   75 LAFTLFLFILLMNLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGiKKKGLGGYLKEFYLQPHP-----LLLPIEIIS 149

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 151 NIIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLTVSFMLILITGqTVLLILESAVAVIQAYVFSILSTLY 220
Cdd:PRK05815  150 EFSRPISLSLRLFGNMLAGELILALIALLGGAGLLLALAPLILP-VAWTIFEIFVGTLQAYIFMMLTIVY 218
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 75-220 1.18e-10

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 60.14  E-value: 1.18e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905  75 ISIFIMMMFNNFMGLFPYIFTSTSHMTLTFTIALpmwMSFMLFGWINNTNH----MFTHLVpQGTPTALMSFMVMIETIS 150
Cdd:PRK13419  175 LTVFFFILVCNLLGLVPYGATATGNINVTLTLAV---FTFFITQYAAIKAHgikgYLAHLT-GGTHWSLWIIMIPIEFIG 250

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1980524905 151 NIIRPGTLAVRLAANMIAGHLLLTLLgntgpsLTVSFML---ILITGQTV-----LLILESAVAVIQAYVFSILSTLY 220
Cdd:PRK13419  251 LFTKPFALTVRLFANMTAGHIVILSL------IFISFILksyIVAVAVSVpfaifIYLLELFVAFLQAYIFTMLSALF 322
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 26-223 6.96e-08

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 50.75  E-value: 6.96e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905  26 FLGLLLIPSMFWLMPSRINILWNKMNLNLHNEFKTLlgmNSFNGSTFIFISIFIMMMFNNFMGLFPYIFTSTSHMTLTFT 105
Cdd:MTH00087   10 FMFVFLLQYLLYFKESMLNVLVKKFFGLLIIVFSYS---NKLPLSSVISFFTFIVLLLFCFGGLFPYSFSPCGMVEFTFL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905 106 IALPMWMSFMLFGWINNTnhMFTHLVPQGTPTALMSF-MVMIETISNIIRPGTLAVRLAANMIAGHLLLTLLGntgpSLT 184
Cdd:MTH00087   87 YALVAWLSTFLSFLSKSE--KFSVYLSKGSDSFLKTFsMLFVEIVSELSRPLALTLRLTVNLMVGHLISSLLN----FLG 160

                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 1980524905 185 VSFMLILItgqtVLLILESAVAVIQAYVFSILSTLYSSE 223
Cdd:MTH00087  161 EKYVWLSI----LAIMMECFVAFIQSYIFSRLIYLYLNE 195
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 50-169 1.16e-06

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 47.19  E-value: 1.16e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905  50 MNLNLHNEFKTLLGMNSFNGSTFIFISIFIMMMFNNFMGL-FPYIFTSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFT 128
Cdd:MTH00050    1 MFVNDFSSLFSLIYKLILGGSVSYYYSVVLFIVLFLFLLYrLPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFS 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1980524905 129 HLVPQGTPTALMSFMVMIETISNIIRPGTLAVRLAANMIAG 169
Cdd:MTH00050   81 SFVPVGTPLYICPFVCIAETISYIIRPVVLILRPFINISLG 121
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 95-220 4.31e-06

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 46.42  E-value: 4.31e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980524905  95 TSTSHMTLTFTIALPMWMSFMLFGWINNTNHMFTHLVPQGTPTALMSFMVMIETI-SNIIRPGTLAVRLAANMIAGHLLL 173
Cdd:PRK13417  217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHVII 296

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1980524905 174 T-LLGNTGPSLTVSFMLILITGQTVLLILESAVAVIQAYVFSILSTLY 220
Cdd:PRK13417  297 LaLMGFIFQFQSWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLF 344
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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