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Conserved domains on  [gi|2046361486|ref|YP_010084024|]
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head maturation protease, partial [Leviviridae sp.]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Phage_mat-A super family cl28021
Phage maturation protein;
350-382 4.73e-07

Phage maturation protein;


The actual alignment was detected with superfamily member PHA00371:

Pssm-ID: 332842  Cd Length: 418  Bit Score: 51.76  E-value: 4.73e-07
                          10        20        30
                  ....*....|....*....|....*....|...
gi 2046361486 350 FGLKLSLYNAWDMIPYSFVVDWFLDIGGMLETF 382
Cdd:PHA00371  297 LGLLNPLEVAWELTPYSFVVDWFLNVGNMLEAL 329
 
Name Accession Description Interval E-value
mat PHA00371
maturation protein
 350-382 4.73e-07

maturation protein


Pssm-ID: 222786  Cd Length: 418  Bit Score: 51.76  E-value: 4.73e-07
                          10        20        30
                  ....*....|....*....|....*....|...
gi 2046361486 350 FGLKLSLYNAWDMIPYSFVVDWFLDIGGMLETF 382
Cdd:PHA00371  297 LGLLNPLEVAWELTPYSFVVDWFLNVGNMLEAL 329
Phage_mat-A pfam03863
Phage maturation protein;
359-428 7.62e-07

Phage maturation protein;


Pssm-ID: 281809  Cd Length: 446  Bit Score: 51.40  E-value: 7.62e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2046361486 359 AWDMIPYSFVVDWFLDIGGMLETFEdhrkslelKPLEVWYSMTTRYFVDGGYQTTYVRLQG--SNAAPSALP 428
Cdd:pfam03863 331 AWEKTPFSFIVDWFINVGDIIEGLK--------APVGCSYMNGTVIDIIDGYQRRDIRMESiiLKDAPNGIP 394
 
Name Accession Description Interval E-value
mat PHA00371
maturation protein
 350-382 4.73e-07

maturation protein


Pssm-ID: 222786  Cd Length: 418  Bit Score: 51.76  E-value: 4.73e-07
                          10        20        30
                  ....*....|....*....|....*....|...
gi 2046361486 350 FGLKLSLYNAWDMIPYSFVVDWFLDIGGMLETF 382
Cdd:PHA00371  297 LGLLNPLEVAWELTPYSFVVDWFLNVGNMLEAL 329
Phage_mat-A pfam03863
Phage maturation protein;
359-428 7.62e-07

Phage maturation protein;


Pssm-ID: 281809  Cd Length: 446  Bit Score: 51.40  E-value: 7.62e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2046361486 359 AWDMIPYSFVVDWFLDIGGMLETFEdhrkslelKPLEVWYSMTTRYFVDGGYQTTYVRLQG--SNAAPSALP 428
Cdd:pfam03863 331 AWEKTPFSFIVDWFINVGDIIEGLK--------APVGCSYMNGTVIDIIDGYQRRDIRMESiiLKDAPNGIP 394
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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