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Conserved domains on  [gi|2192924914|ref|YP_010262110|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Intoshia linei]

Protein Classification

complex I subunit 1 family protein( domain architecture ID 103)

complex I subunit 1 family protein similar to NADH dehydrogenase subunit 1, which is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

EC:  7.1.1.-
Gene Ontology:  GO:0016655|GO:0016020
PubMed:  23417064|24059520
SCOP:  4005664

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
PRK06076 super family cl00469
NADH-quinone oxidoreductase subunit NuoH;
3-279 2.37e-45

NADH-quinone oxidoreductase subunit NuoH;


The actual alignment was detected with superfamily member MTH00218:

Pssm-ID: 469782  Cd Length: 311  Bit Score: 155.45  E-value: 2.37e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914   3 LMVLILMPIFLLLAAAFSTLLERNIFGLIQMRFSPNKNILAGIMQPLMDGLKLMMKMKMGLIYSNKILLMMFSLFIFPLS 82
Cdd:MTH00218    5 LINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLA 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914  83 LIFSLIICFNNYLFFSKFSMLWILLLSTTFSFFMMMISFFSKSKYSGIGSQRIYSQMISYEIVMSFFMMLISIILMTYLS 162
Cdd:MTH00218   85 LLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSL 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914 163 FNLFYLNNIKYVCIKMPFMLVIWLFIILAEMNRTPFDSVEGESEIVSGFNTELSSLIFVYIFLSEYIIMSLFSFLTTMIF 242
Cdd:MTH00218  165 EGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILF 244

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 2192924914 243 CNNFFYLFCYIMFLSLIFS----IRSLLPRMRYDKMMLMFW 279
Cdd:MTH00218  245 LGTSLTTINLMLKATLLVFlflwVRASLPRFRYDQLMHLAW 285
 
Name Accession Description Interval E-value
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 3-279 2.37e-45

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 155.45  E-value: 2.37e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914   3 LMVLILMPIFLLLAAAFSTLLERNIFGLIQMRFSPNKNILAGIMQPLMDGLKLMMKMKMGLIYSNKILLMMFSLFIFPLS 82
Cdd:MTH00218    5 LINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLA 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914  83 LIFSLIICFNNYLFFSKFSMLWILLLSTTFSFFMMMISFFSKSKYSGIGSQRIYSQMISYEIVMSFFMMLISIILMTYLS 162
Cdd:MTH00218   85 LLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSL 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914 163 FNLFYLNNIKYVCIKMPFMLVIWLFIILAEMNRTPFDSVEGESEIVSGFNTELSSLIFVYIFLSEYIIMSLFSFLTTMIF 242
Cdd:MTH00218  165 EGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILF 244

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 2192924914 243 CNNFFYLFCYIMFLSLIFS----IRSLLPRMRYDKMMLMFW 279
Cdd:MTH00218  245 LGTSLTTINLMLKATLLVFlflwVRASLPRFRYDQLMHLAW 285
NADHdh pfam00146
NADH dehydrogenase;
5-279 1.87e-43

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 150.32  E-value: 1.87e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914   5 VLILMPIFLLLAAAFSTLLERNIFGLIQMRFSPNKNILAGIMQPLMDGLKLMMKMKMGLIYSNKILLMMFSLFIFPLSLI 84
Cdd:pfam00146   1 KILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914  85 FSLIICFNNYLFFSKF--SMLWILLLSTTFSFFMMMISFFSKSKYSGIGSQRIYSQMISYEIVMSFFMMlisIILMTYLS 162
Cdd:pfam00146  81 AFAVIPFGPGLVLADLnvGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLL---AVVLLAGS 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914 163 FNLFYLNN---IKYVCIKMPFMLVIWLFIILAEMNRTPFDSVEGESEIVSGFNTELSSLIFVYIFLSEYIIMSLFSFLTT 239
Cdd:pfam00146 158 LSLSEIVEaqaGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAV 237

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 2192924914 240 MIF---------CNNFFYLFCYIMFLSLIFS-IRSLLPRMRYDKMMLMFW 279
Cdd:pfam00146 238 TLFlggwlgpfpLPGLLWFLLKVFFVFFLFIwIRATLPRFRYDQLMRLGW 287
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-279 2.87e-39

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 139.88  E-value: 2.87e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914   1 MILMVLILMPIFLLLAAAFSTLLERNIFGLIQMRFSPNKNILAGIMQPLMDGLKLMMKMKMGLIYSNKILLMMFSLFIFP 80
Cdd:COG1005    10 ITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFI 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914  81 LSLIFSLIICFNNYLFFSKF--SMLWILLLSTTFSFFMMMISFFSKSKYSGIGSQRIYSQMISYEIVMSFFMMlisIILM 158
Cdd:COG1005    90 PALLAFAVIPFGPGLVLADLnvGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLL---GVVL 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914 159 TYLSFNLF----YLNNIKYVCIKMPFMLVIWLFIILAEMNRTPFDSVEGESEIVSGFNTELSSLIFVYIFLSEYIIMSLF 234
Cdd:COG1005   167 LAGSLNLSeiveAQAGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2192924914 235 SFLTTMIF---------------CNNFFYLFCYIMFLSLIFS-IRSLLPRMRYDKMMLMFW 279
Cdd:COG1005   247 SALATTLFlggwlgpfpilplggLPGILWFLLKTLFFIFFFIwVRATLPRYRYDQLMRLGW 307
 
Name Accession Description Interval E-value
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 3-279 2.37e-45

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 155.45  E-value: 2.37e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914   3 LMVLILMPIFLLLAAAFSTLLERNIFGLIQMRFSPNKNILAGIMQPLMDGLKLMMKMKMGLIYSNKILLMMFSLFIFPLS 82
Cdd:MTH00218    5 LINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLA 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914  83 LIFSLIICFNNYLFFSKFSMLWILLLSTTFSFFMMMISFFSKSKYSGIGSQRIYSQMISYEIVMSFFMMLISIILMTYLS 162
Cdd:MTH00218   85 LLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSL 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914 163 FNLFYLNNIKYVCIKMPFMLVIWLFIILAEMNRTPFDSVEGESEIVSGFNTELSSLIFVYIFLSEYIIMSLFSFLTTMIF 242
Cdd:MTH00218  165 EGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILF 244

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 2192924914 243 CNNFFYLFCYIMFLSLIFS----IRSLLPRMRYDKMMLMFW 279
Cdd:MTH00218  245 LGTSLTTINLMLKATLLVFlflwVRASLPRFRYDQLMHLAW 285
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 1-279 8.79e-44

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 151.46  E-value: 8.79e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914   1 MILMVLILMPIFLLLAAAFSTLLERNIFGLIQMRFSPNKNILAGIMQPLMDGLKLMMKMKMGLIYSNKILLMMFSLFIFP 80
Cdd:MTH00193    3 MMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914  81 LSLIFSLIICFNNYLFFSKFSMLWILLLSTTFSFFMMMISFFSKSKYSGIGSQRIYSQMISYEIVMSFFMMLISIILMTY 160
Cdd:MTH00193   83 LSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSF 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914 161 LSFNLFYLNNIKYVCIKMPFMLVIWLFIILAEMNRTPFDSVEGESEIVSGFNTELSSLIFVYIFLSEYIIMSLFSFLTTM 240
Cdd:MTH00193  163 NLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVL 242

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 2192924914 241 IF----CNNFFYLFCYIMFLSLIFSIRSLLPRMRYDKMMLMFW 279
Cdd:MTH00193  243 MFlggdLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAW 285
NADHdh pfam00146
NADH dehydrogenase;
5-279 1.87e-43

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 150.32  E-value: 1.87e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914   5 VLILMPIFLLLAAAFSTLLERNIFGLIQMRFSPNKNILAGIMQPLMDGLKLMMKMKMGLIYSNKILLMMFSLFIFPLSLI 84
Cdd:pfam00146   1 KILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914  85 FSLIICFNNYLFFSKF--SMLWILLLSTTFSFFMMMISFFSKSKYSGIGSQRIYSQMISYEIVMSFFMMlisIILMTYLS 162
Cdd:pfam00146  81 AFAVIPFGPGLVLADLnvGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLL---AVVLLAGS 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914 163 FNLFYLNN---IKYVCIKMPFMLVIWLFIILAEMNRTPFDSVEGESEIVSGFNTELSSLIFVYIFLSEYIIMSLFSFLTT 239
Cdd:pfam00146 158 LSLSEIVEaqaGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAV 237

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 2192924914 240 MIF---------CNNFFYLFCYIMFLSLIFS-IRSLLPRMRYDKMMLMFW 279
Cdd:pfam00146 238 TLFlggwlgpfpLPGLLWFLLKVFFVFFLFIwIRATLPRFRYDQLMRLGW 287
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-279 2.87e-39

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 139.88  E-value: 2.87e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914   1 MILMVLILMPIFLLLAAAFSTLLERNIFGLIQMRFSPNKNILAGIMQPLMDGLKLMMKMKMGLIYSNKILLMMFSLFIFP 80
Cdd:COG1005    10 ITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFI 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914  81 LSLIFSLIICFNNYLFFSKF--SMLWILLLSTTFSFFMMMISFFSKSKYSGIGSQRIYSQMISYEIVMSFFMMlisIILM 158
Cdd:COG1005    90 PALLAFAVIPFGPGLVLADLnvGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLL---GVVL 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914 159 TYLSFNLF----YLNNIKYVCIKMPFMLVIWLFIILAEMNRTPFDSVEGESEIVSGFNTELSSLIFVYIFLSEYIIMSLF 234
Cdd:COG1005   167 LAGSLNLSeiveAQAGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2192924914 235 SFLTTMIF---------------CNNFFYLFCYIMFLSLIFS-IRSLLPRMRYDKMMLMFW 279
Cdd:COG1005   247 SALATTLFlggwlgpfpilplggLPGILWFLLKTLFFIFFFIwVRATLPRYRYDQLMRLGW 307
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 1-279 3.20e-39

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 139.40  E-value: 3.20e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914   1 MILMVLILMPIFLLLAAAFSTLLERNIFGLIQMRFSPNKNILAGIMQPLMDGLKLMMKMKMGLIYSNKILLMMFSLFIFP 80
Cdd:MTH00225    2 SFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914  81 LSLIFSLIICFNNYLFFSKFSMLWILLLSTTFSFFMMMISFFSKSKYSGIGSQRIYSQMISYEIVMSFFMMLISIILMTY 160
Cdd:MTH00225   82 LSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTY 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914 161 LSFNLFYLNNIKYVCIKMPFMLVIWLFIILAEMNRTPFDSVEGESEIVSGFNTELSSLIFVYIFLSEY---IIMSLFS-- 235
Cdd:MTH00225  162 NLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYgsiLFMSMLTsi 241

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 2192924914 236 -FLTTMIFCNNFFYLFCYIMFLSLIFSIRSLLPRMRYDKMMLMFW 279
Cdd:MTH00225  242 lFFGGFFVTIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTW 286
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 1-279 5.44e-38

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 136.15  E-value: 5.44e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914   1 MILMVLILMPIFLLLAAAFSTLLERNIFGLIQMRFSPNKNILAGIMQPLMDGLKLMMKMKMGLIYSNKILLMMFSlfIFP 80
Cdd:MTH00143    2 VSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAP--CLS 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914  81 LSLIFSLIICFNNYLFFS--KFSMLWILLLSTTFSFFMMMISFFSKSKYSGIGSQRIYSQMISYEIVMSFFMMLISIILM 158
Cdd:MTH00143   80 LILALLLWQLYPSYFSSSyfGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSG 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914 159 TYLSFNLFYLNNIKYVCIKMPFMLVIWLFIILAEMNRTPFDSVEGESEIVSGFNTELSSLIFVYIFLSEY---IIMSLFS 235
Cdd:MTH00143  160 SFSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYaniLFMSLLT 239

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 2192924914 236 FL-----TTMIFCNNFFYLFCYIMFLSLIFS-IRSLLPRMRYDKMMLMFW 279
Cdd:MTH00143  240 VVlffggSSVLFLLGGVVFMFKVLFFAFLFIwVRASYPRFRYDLLMMLCW 289
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 1-279 2.94e-37

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 134.48  E-value: 2.94e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914   1 MILMVLILMPIflLLAAAFSTLLERNIFGLIQMRFSPNKNILAGIMQPLMDGLKLMMKMKMGLIYSNKILLMMFSLFIFP 80
Cdd:MTH00195    5 VIHFLIQIVPV--LLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALA 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914  81 LSLIFSLIICFNNYLFFSKFSMLWILLLSTTFSFFMMMISFFSKSKYSGIGSQRIYSQMISYEIVMSFFMMLISIILMTY 160
Cdd:MTH00195   83 LALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSF 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914 161 LSFNLFYLNNIKYVCIKMPFMLVIWLFIILAEMNRTPFDSVEGESEIVSGFNTELSSLIFVYIFLSEYIIMSLFSFLTTM 240
Cdd:MTH00195  163 DFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTI 242

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 2192924914 241 IF--CNNFFYLFCYIMFLSLIFS-IRSLLPRMRYDKMMLMFW 279
Cdd:MTH00195  243 LFlgGGGTIIVALKSLFLSFCFLwVRGSLPRFRYDQLMHLTW 284
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 6-279 1.94e-36

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 131.56  E-value: 1.94e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914   6 LILMPIFLLLAAAFSTLLERNIFGLIQMRFSPNKNILAGIMQPLMDGLKLMMKMKMGLIYSNKILLMMFSLFIFPLSLIF 85
Cdd:MTH00090    2 LLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLE 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914  86 SLIICFNNYLFFSKFSMLWILLLSTTFSFFMMMISFFSKSKYSGIGSQRIYSQMISYEIVmsfFMMLISIILMTYLSFNL 165
Cdd:MTH00090   82 WFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIA---FSLYLLSIMLHNNSFSF 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914 166 FYLNNIKYVCIKMPFmlviwLFIILAEMNRTPFDSVEGESEIVSGFNTELSSLIFVYIFLSEYIIMSLFSFLTTMIFCnN 245
Cdd:MTH00090  159 VSSFSLSLFVIYLPF-----LIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFF-K 232

                         250       260       270
                  ....*....|....*....|....*....|....
gi 2192924914 246 FFYLFCYIMFLSLIFsIRSLLPRMRYDKMMLMFW 279
Cdd:MTH00090  233 FSFLMLFLIFSLLIF-IRSSYPRFRYDMMMSMFW 265
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 6-279 3.31e-36

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 131.83  E-value: 3.31e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914   6 LILMPIFLLLAAAFSTLLERNIFGLIQMRFSPNKNILAGIMQPLMDGLKLMMKMKMGLIYSNKILLMMFSLFIFPLSLIF 85
Cdd:MTH00010    9 ILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLL 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914  86 SLIICFNNYLFFSKFSMLWILLLSTTFSFFMMMISFFSKSKYSGIGSQRIYSQMISYEIVMSFFMMLISIILMTYlSFNL 165
Cdd:MTH00010   89 WSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTF-SFSK 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914 166 FYLNNIKYVCIKMPFMLVIWLFIILAEMNRTPFDSVEGESEIVSGFNTELSSLIFVYIFLSEY---IIMSLFSFLTTMIF 242
Cdd:MTH00010  168 IIMSQYSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYaniLIMSLFTSVFFTSF 247

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 2192924914 243 CNNFF----YLFCYIMFLSLIFS-IRSLLPRMRYDKMMLMFW 279
Cdd:MTH00010  248 IPSIFisdlMLILKTVFLAFLFIwIRATFPRMRYDRLMNLTW 289
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
1-281 3.00e-34

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 126.85  E-value: 3.00e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914   1 MILMVLILMPIFLLLAAAFSTLLERNIFGLIQMRFSPNKNILAGIMQPLMDGLKLMMKMKMGLIYSNKILLMMFSLFIFP 80
Cdd:PRK06076   11 LILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFI 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914  81 LSLIFSLIICFNNYLFFSKF--SMLWILLLSTTFSFFMMMISFFSKSKYSGIGSQRIYSQMISYEIVMSFFMMLIsiiLM 158
Cdd:PRK06076   91 PAFLAWAVIPFGPELVIADLnvGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAV---VL 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914 159 TYLSFNLFYLNN---IKYVCIKMPFMLVIWLFIILAEMNRTPFDSVEGESEIVSGFNTELSSLIFVYIFLSEYIIMSLFS 235
Cdd:PRK06076  168 LAGSLNLSDIVEaqfLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVS 247

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914 236 FLTTMIFCN--NFFYLFCY------------IMFLSLIFSIRSLLPRMRYDKMMLMFWNF 281
Cdd:PRK06076  248 ALITTLFLGgwLPPFPLGGgipgaiwfvlkvAFFVFLFIWLRATLPRYRYDQLMRLGWKV 307
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 2-281 5.38e-33

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 122.73  E-value: 5.38e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914   2 ILMVLILMPIFLLLAAAFSTLLERNIFGLIQMRFSPNKNILAGIMQPLMDGLKLMMKMKMGLIYSNKILLMMFSLFIFPL 81
Cdd:MTH00058    3 GLVSGLEGLLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914  82 SLIFSLIICFNNYLFFSKFSMLWILLLSTTFSFFMMMISFFSKSKYSGIGSQRIYSQMISYEIVmsfFMMLISIILMTYL 161
Cdd:MTH00058   83 VVFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEAC---FMCIVIFCGLCYG 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914 162 SFNLF-YLNNIKYVCIKMPFMLVIWLFIILAEMNRTPFDSVEGESEIVSGFNTELSSLIFVYIFLSEYIIMSLFSFLTTM 240
Cdd:MTH00058  160 SYSLVdFYYSGWLSVLLFPLIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSV 239

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 2192924914 241 IFCNNFFYLFCYIMFLSLIFSIRSLLPRMRYDKMMLMFWNF 281
Cdd:MTH00058  240 LFFGGGFVSIMLLFHLLFFMWARATLPRVRYDYFVNFFWEY 280
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 1-281 1.32e-32

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 122.42  E-value: 1.32e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914   1 MILMVLILMPIFL----LLAAAFSTLLERNIFGLIQMRFSPNKNILAGIMQPLMDGLKLMMKMKMGLIYSNKILLMMFSL 76
Cdd:MTH00071    2 MTLISLIINPLLYiipvLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPT 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914  77 FIFPLSLIFSLIICFNNYLFFSKFSMLWILLLSTTFSFFMMMISFFSKSKYSGIGSQRIYSQMISYEIVMSffMMLISII 156
Cdd:MTH00071   82 MALTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLG--LILLCLI 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914 157 LMTYlSFNLFYLNNIK-YVCIKMPF--MLVIWLFIILAEMNRTPFDSVEGESEIVSGFNTELSSLIFVYIFLSEYIIMSL 233
Cdd:MTH00071  160 LLTG-GFSLMNFNTTQeFMWLIIPAwpMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILM 238

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914 234 FSFLTTMIFCNNFFY----------LFCYIMFLSLIFS-IRSLLPRMRYDKMMLMFW-NF 281
Cdd:MTH00071  239 MNTLSTILFLGSTYNhlqpelstmnLMIKASILSMLFLwVRASYPRFRYDQLMHLVWkNF 298
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 2-279 1.12e-31

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 119.84  E-value: 1.12e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914   2 ILMVLILMPIFLLLAAAFSTLLERNIFGLIQMRFSPNKNILAGIMQPLMDGLKLMMKMKMGLIYSNKILLMMFSLFIFPL 81
Cdd:MTH00216    8 YLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTL 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914  82 SLIFSLIICF--NNYLFFSKFSMLWILLLSTTFSFFMMMISFFSKSKYSGIGSQRIYSQMISYEIVMSffMMLISIILMT 159
Cdd:MTH00216   88 ALIVWGVIPYerGVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIG--LIIISVLLCV 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914 160 -YLSFNLFYLNNIKYVCIKMPFMLVIWLFII--LAEMNRTPFDSVEGESEIVSGFNTELSSLIFVYIFLSEYIIMSLFSF 236
Cdd:MTH00216  166 gSLSITEIVLAQNNGIWFFFPLFPVAIMFFAsaLAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSC 245

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2192924914 237 LTTMIF------------CNNFFYLFCYIMFLSLIFSIRSLLPRMRYDKMMLMFW 279
Cdd:MTH00216  246 LTTILFlggwlspikyfkGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLW 300
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 5-279 2.83e-30

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 116.23  E-value: 2.83e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914   5 VLILMPIflLLAAAFSTLLERNIFGLIQMRFSPNKNILAGIMQPLMDGLKLMMKMKMGLIYSNKILLMMFSLFIFPLSLI 84
Cdd:MTH00040   11 LSFIVPV--LLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLALL 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914  85 FSLIICFNNYLFFSKFSMLWILLLSTTFSFFMMMISFFSKSKYSGIGSQRIYSQMISYEIvmSFFMMLISIILMTYlSFN 164
Cdd:MTH00040   89 LWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEI--SLGLILLSLVIFSG-SFS 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914 165 LFYLNNIKYVC-IKMPF--MLVIWLFIILAEMNRTPFDSVEGESEIVSGFNTELSSLIFVYIFLSEY---IIMSLFS--- 235
Cdd:MTH00040  166 LSSISNSQNGSwLLFPClpLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYaniIFMNLLSvil 245

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 2192924914 236 FLTTMIFCNNFFYLFCYIM-----FLSLIFS-IRSLLPRMRYDKMMLMFW 279
Cdd:MTH00040  246 FLGGGSPFNEIFPINIIIVgikttFLVFLFLwVRASYPRFRYDQLMFLTW 295
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-279 1.02e-29

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 114.72  E-value: 1.02e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914   1 MILMVLILMPIFLLLAAAFSTLLERNIFGLIQMRFSPNKNILAGIMQPLMDGLKLMMKMKMGLIYSNKILLMMFSLFIFP 80
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914  81 LSLIFSLIICFNNYLFFSKFSMLWILLLSTTFSFFMMMISFFSKSKYSGIGSQRIYSQMISYEIVMSffMMLISIILMTY 160
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLA--IILLSVLLMNG 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914 161 lSFNLFYLNNIK---YVCIKMPFMLVIWLFIILAEMNRTPFDSVEGESEIVSGFNTELSSLIFVYIFLSEYIIMSLFSFL 237
Cdd:MTH00104  159 -SFTLSTLITTQehlWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNAL 237

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2192924914 238 TTMIFCNNFF-------YLFCYIM----FLSLIFSIRSLLPRMRYDKMMLMFW 279
Cdd:MTH00104  238 TTILFLGAFHnpympelYTTNFTIktllLTILFLWIRASYPRFRYDQLMHLLW 290
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 1-279 2.16e-29

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 113.84  E-value: 2.16e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914   1 MILMVLILMP----IFLLLAAAFSTLLERNIFGLIQMRFSPNKNILAGIMQPLMDGLKLMMKMKMGLIYSNKILLMMFSL 76
Cdd:MTH00111    2 PTLLLNLINPllyiIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914  77 FIFPLSLIFSLIICFNNYLFFSKFSMLWILLLSTTFSFFMMMISFFSKSKYSGIGSQRIYSQMISYEIVMSffMMLISII 156
Cdd:MTH00111   82 LALLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLG--IILLSLI 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914 157 LMTYlSFNLFYLNNIK---YVCIKMPFMLVIWLFIILAEMNRTPFDSVEGESEIVSGFNTELSSLIFVYIFLSEYIIMSL 233
Cdd:MTH00111  160 LLSG-GYTLQTLATTQeplWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILL 238

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2192924914 234 FSFLTTMIFCN--------NFF--YLFCYIMFLSLIFS-IRSLLPRMRYDKMMLMFW 279
Cdd:MTH00111  239 MNTLTTILFLNpstlnlppELFtiNLMTKTLLLTSGFLwIRASYPRFRYDQLMHLLW 295
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-281 2.69e-29

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 113.55  E-value: 2.69e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914   1 MILMVLILMP----IFLLLAAAFSTLLERNIFGLIQMRFSPNKNILAGIMQPLMDGLKLMMKMKMGLIYSNKILLMMFSL 76
Cdd:MTH00134    3 STLITHIINPlayiVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPM 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914  77 FIFPLSLIFSLIICFNNYLFFSKFSMLWILLLSTTFSFFMMMISFFSKSKYSGIGSQRIYSQMISYEIvmSFFMMLISII 156
Cdd:MTH00134   83 LALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEV--SLGLILLSVI 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914 157 LMTYlSFNLFYLN----NIKYVCIKMPfMLVIWLFIILAEMNRTPFDSVEGESEIVSGFNTELSSLIFVYIFLSEYIIMS 232
Cdd:MTH00134  161 IFTG-GFTLQTFNtaqeSIWLLLPAWP-LAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIL 238

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2192924914 233 LFSFLTTMIFCNNFFY----------LFCYIMFLSLIFS-IRSLLPRMRYDKMMLMFW-NF 281
Cdd:MTH00134  239 LMNTLSAILFLGASHIptlpelttinLMTKAALLSVVFLwVRASYPRFRYDQLMHLVWkNF 299
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 1-279 2.31e-28

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 110.97  E-value: 2.31e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914   1 MILMVLILMPIFLLLAAAFSTLLERNIFGLIQMRFSPNKNILAGIMQPLMDGLKLMMKMKMGLIYSNKILLMMFSLFIFP 80
Cdd:MTH00054    3 IIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLT 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914  81 LSLIFSLIICFNNYLFFSKFSM--LWILLLSTTFSFFMMMISFFSKSKYSGIGSQRIYSQMISYEIvmSFFMMLISIIL- 157
Cdd:MTH00054   83 LAFIAWGVIPYGEGVVLSDLGIgiLYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEV--SIGLIIISVVLc 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914 158 MTYLSFNLFYLNNIKYVCIKMPFMLVIWLFI-ILAEMNRTPFDSVEGESEIVSGFNTELSSLIFVYIFLSEY---IIMSL 233
Cdd:MTH00054  161 VGSLNLTEIVLAQKNIWFIFPLFPAAIMFFVsALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYchiILMST 240

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2192924914 234 F----------SFLTTMIFCNNFFYLFCYIMFLSLIFS-IRSLLPRMRYDKMMLMFW 279
Cdd:MTH00054  241 FgvilflggwlVISGPTSYFSNFVWFGIKIALIIFLFIwIRASYPRIRYDQLMALLW 297
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 6-279 7.74e-24

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 98.94  E-value: 7.74e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914   6 LILMPIFLLLAAAFSTLLERNIFGLIQMRFSPNKNILAGIMQPLMDGLKLMMKMKMGLIYSNKILLMMFSLFIFPLSLIF 85
Cdd:MTH00029   13 LLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILA 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914  86 SLIICFNNYLFFSKFSM--LWILLLSTTFSFFMMMISFFSKSKYSGIGSQRIYSQMISYEIVMSffMMLISIIL-MTYLS 162
Cdd:MTH00029   93 WAIVTMDQGVFLSDLDVgvLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIG--LIIISVILcVGSLN 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914 163 FNLFYLNNiKYVCIKMPFMLVIWLFII--LAEMNRTPFDSVEGESEIVSGFNTELSSLIFVYIFLSEYIIMSLFSFLTTM 240
Cdd:MTH00029  171 ISEIVISQ-RSVWLIIPLFPAAIMFMVasLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTI 249

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2192924914 241 IFCNN----------------------------FFYLFCYIMFLSLIFSiRSLLPRMRYDKMMLMFW 279
Cdd:MTH00029  250 FFLGGwlspldgiptppeafsifeqiasskssfWFFTKSSIFILFFIWS-RASFPRIRYDQLMKLLW 315
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
1-279 2.12e-14

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 72.14  E-value: 2.12e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914   1 MILMVLILMPIFLLLAAAFSTLLERNIFGLIQMRFSPnknilaGIMQPLMDGLKLMMKMKMGLIYSNKILLMMFSLFIFP 80
Cdd:COG0650     2 MLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASWLFRAAPYVALAA 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914  81 LSLIFSLIICFNNYLFFS-KFSMLWILLLSTTFSFFMMMISFFSKSKYSGIGSQRIYSQMISYEIVMsffMMLISIILMT 159
Cdd:COG0650    76 MLLAALLVPVLTTGPPLSfSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPL---LLVLFALALL 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914 160 YLSFNLFYLNN------IKYVCIKMPFMLVIWLFIILAEMNRTPFDSVEGESEIVSGFNTELSS----LIFVYIFLSEYI 229
Cdd:COG0650   153 AGSTSLSDIVAyqaahgPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGrhlaLLELAAALKLFV 232

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2192924914 230 IMSLFS------FLTTMIFCNNFFYLFCYIMFLSLIFSIRSLLPRMRYDKMMLMFW 279
Cdd:COG0650   233 LLSLFVnlflpwGIALTLLLALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLW 288
ndhA CHL00032
NADH dehydrogenase subunit 1
 4-281 2.34e-12

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 66.51  E-value: 2.34e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914   4 MVLILMPIFLLLAAAFSTL-----LERNIFGLIQMRFSPNKNILAGIMQPLMDGLKLMMKMKmglIYSNKILLMMFSL-- 76
Cdd:CHL00032   26 LIWILVPILTLVLGITIGVlvivwLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKED---LLPSRGDIRLFSIgp 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914  77 FIFPLSLIFS-LIICFNNYLFFSKFSM---LWILLlSTTFSFFMMMISFFSKSKYSGIGSQRIYSQMISYEIVMSFFMML 152
Cdd:CHL00032  103 SIAVISILLSyLVIPFGYHLVLADLSIgvfLWIAI-SSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLS 181

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914 153 ISII---LMT-----------YLSFNLFylnnikyvciKMPFMLVIWLFIILAEMNRTPFDSVEGESEIVSGFNTELSSL 218
Cdd:CHL00032  182 ISLLsnsLSTvdiveaqskygFWGWNLW----------RQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGI 251

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2192924914 219 IFVYIFLSEYI---IMSLF---------SFLTTMIFCNNFF----------------------YLFCYIMFLslifsIRS 264
Cdd:CHL00032  252 KFGLFYVASYLnllVSSLFvtvlylggwNLSIPYIFIPELFeinktggvfgttigifitlaktYLFLFISIT-----TRW 326

                         330
                  ....*....|....*..
gi 2192924914 265 LLPRMRYDKMMLMFWNF 281
Cdd:CHL00032  327 TLPRLRMDQLLNLGWKF 343
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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