|
Name |
Accession |
Description |
Interval |
E-value |
| ND3 |
MTH00161 |
NADH dehydrogenase subunit 3; Provisional |
3-115 |
2.98e-43 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177217 [Multi-domain] Cd Length: 113 Bit Score: 137.22 E-value: 2.98e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2199204234 3 ILSTSIFISFIIPMIVMILATTLSKKLINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIFK 82
Cdd:MTH00161 1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80
|
90 100 110
....*....|....*....|....*....|...
gi 2199204234 83 TSDIMIWTVSTMFFIMVLLGGLYHEWNQGALQW 115
Cdd:MTH00161 81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
|
|
| ND3 |
MTH00148 |
NADH dehydrogenase subunit 3; Provisional |
1-117 |
2.16e-41 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214433 [Multi-domain] Cd Length: 117 Bit Score: 132.67 E-value: 2.16e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2199204234 1 MLILSTSIFISFIIPMIVMILATTLSKKLINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00148 1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80
|
90 100 110
....*....|....*....|....*....|....*..
gi 2199204234 81 FKTSDIMIWTVSTMFFIMVLLGGLYHEWNQGALQWAE 117
Cdd:MTH00148 81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
|
|
| ND3 |
MTH00202 |
NADH dehydrogenase subunit 3; Provisional |
1-117 |
5.91e-38 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214455 [Multi-domain] Cd Length: 117 Bit Score: 123.95 E-value: 5.91e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2199204234 1 MLILSTSIFISFIIPMIVMILATTLSKKLINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00202 1 MLLILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80
|
90 100 110
....*....|....*....|....*....|....*..
gi 2199204234 81 FKTSDIMIWTVSTMFFIMVLLGGLYHEWNQGALQWAE 117
Cdd:MTH00202 81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
|
|
| ND3 |
MTH00012 |
NADH dehydrogenase subunit 3; Validated |
1-116 |
2.61e-33 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 164588 [Multi-domain] Cd Length: 117 Bit Score: 112.26 E-value: 2.61e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2199204234 1 MLILSTSIFISFIIPMIVMILATTLSKKLINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00012 1 MSLMMIPMMISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80
|
90 100 110
....*....|....*....|....*....|....*.
gi 2199204234 81 FKTSDIMIWTVSTMFFIMVLLGGLYHEWNQGALQWA 116
Cdd:MTH00012 81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
|
|
| ND3 |
MTH00106 |
NADH dehydrogenase subunit 3; Provisional |
4-117 |
2.54e-28 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177168 [Multi-domain] Cd Length: 115 Bit Score: 99.24 E-value: 2.54e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2199204234 4 LSTSIFISFIIPMIVMILATTLSKkLINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIFKT 83
Cdd:MTH00106 3 LMLTLLTNTLLASLLVLIAFWLPQ-LNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQT 81
|
90 100 110
....*....|....*....|....*....|....
gi 2199204234 84 SDIMIWTVSTMFFIMVLLGGLYHEWNQGALQWAE 117
Cdd:MTH00106 82 NNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
|
|
| ND3 |
MTH00136 |
NADH dehydrogenase subunit 3; Provisional |
1-117 |
5.75e-28 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177194 [Multi-domain] Cd Length: 116 Bit Score: 98.45 E-value: 5.75e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2199204234 1 MLILSTSIFISFIIPMIVMILATTLSKkLINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00136 1 MNLITTILTITIALSLILAIVSFWLPQ-MTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWG 79
|
90 100 110
....*....|....*....|....*....|....*..
gi 2199204234 81 FKTSDIMIWTVSTMFFIMVLLGGLYHEWNQGALQWAE 117
Cdd:MTH00136 80 DQLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
|
|
| ND3 |
MTH00113 |
NADH dehydrogenase subunit 3; Provisional |
4-116 |
2.80e-26 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177175 [Multi-domain] Cd Length: 114 Bit Score: 94.18 E-value: 2.80e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2199204234 4 LSTSIFISFIIPMIVMILATTLSKKLiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIFKT 83
Cdd:MTH00113 3 LISMLTISLALSTILTTLNFWLTQTK-PDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAINL 81
|
90 100 110
....*....|....*....|....*....|...
gi 2199204234 84 SDIMIWTVSTMFFIMVLLGGLYHEWNQGALQWA 116
Cdd:MTH00113 82 TTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
|
|
| ND3 |
MTH00069 |
NADH dehydrogenase subunit 3; Provisional |
16-117 |
6.54e-26 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177141 [Multi-domain] Cd Length: 114 Bit Score: 93.13 E-value: 6.54e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2199204234 16 MIVMILATTLSKKLIN----------DREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIFKTSD 85
Cdd:MTH00069 3 MLMLLISTILSLILITisfwlplnnpDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLNT 82
|
90 100 110
....*....|....*....|....*....|..
gi 2199204234 86 IMIWTVSTMFFIMVLLGGLYHEWNQGALQWAE 117
Cdd:MTH00069 83 PTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
|
|
| Oxidored_q4 |
pfam00507 |
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; |
32-114 |
6.66e-26 |
|
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
Pssm-ID: 459838 [Multi-domain] Cd Length: 94 Bit Score: 92.49 E-value: 6.66e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2199204234 32 DREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIFKtSDIMIWTVSTMFFIMVLLGGLYHEWNQG 111
Cdd:pfam00507 13 NPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR-ELGWFGFVEMLIFIAILLVGLVYAWKKG 91
|
...
gi 2199204234 112 ALQ 114
Cdd:pfam00507 92 ALE 94
|
|
| ND3 |
MTH00042 |
NADH dehydrogenase subunit 3; Validated |
6-117 |
1.18e-25 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 177117 [Multi-domain] Cd Length: 116 Bit Score: 92.74 E-value: 1.18e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2199204234 6 TSIFISFIIPMIVMILATTLSKKLIN---DREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIFK 82
Cdd:MTH00042 2 TNLIFFLLIILILTSLLLLAGHFLPSrspDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATL 81
|
90 100 110
....*....|....*....|....*....|....*
gi 2199204234 83 TSDIMIWTVSTMFFIMVLLGGLYHEWNQGALQWAE 117
Cdd:MTH00042 82 ITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
|
|
| ND3 |
MTH00203 |
NADH dehydrogenase subunit 3; Provisional |
1-115 |
1.19e-24 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214456 [Multi-domain] Cd Length: 112 Bit Score: 89.96 E-value: 1.19e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2199204234 1 MLILSTSIFISFIIPMIVMILATTLSKkLINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00203 1 MNLIMLFFLIALLLSLILLFIAFWLPK-VNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWS 79
|
90 100 110
....*....|....*....|....*....|....*
gi 2199204234 81 FKTSDimIWTVSTMFFIMVLLGGLYHEWNQGALQW 115
Cdd:MTH00203 80 NQLSS--LSLLLAFLFLILLTLGLIYEWLQGGLEW 112
|
|
| NuoA |
COG0838 |
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ... |
1-115 |
9.53e-23 |
|
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440600 [Multi-domain] Cd Length: 117 Bit Score: 85.17 E-value: 9.53e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2199204234 1 MLILSTSIFISFIIPMIVMILATTLSKKL---INDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPI 77
Cdd:COG0838 1 MLSDYLPILIFLLVALGLALAMLLLSRLLgpkRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPW 80
|
90 100 110
....*....|....*....|....*....|....*...
gi 2199204234 78 VIIFKTSDIMIWtVSTMFFIMVLLGGLYHEWNQGALQW 115
Cdd:COG0838 81 AVVFRELGWFGL-IEMLVFIAILLVGLIYAWKKGALEW 117
|
|
| PRK06602 |
PRK06602 |
NADH:ubiquinone oxidoreductase subunit A; Validated |
8-116 |
1.22e-21 |
|
NADH:ubiquinone oxidoreductase subunit A; Validated
Pssm-ID: 180638 [Multi-domain] Cd Length: 121 Bit Score: 82.60 E-value: 1.22e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2199204234 8 IFISFIIPMIVMILATTLSKKLiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIFKTSDiM 87
Cdd:PRK06602 15 LIVAIGLGILLLVAGKLLGPRA-PDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSFREIG-W 92
|
90 100
....*....|....*....|....*....
gi 2199204234 88 IWTVSTMFFIMVLLGGLYHEWNQGALQWA 116
Cdd:PRK06602 93 LGFVEAMIFILVLLVGLVYLWRKGALDWE 121
|
|
| ND3 |
MTH00018 |
NADH dehydrogenase subunit 3; Validated |
8-115 |
7.61e-18 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 164592 [Multi-domain] Cd Length: 113 Bit Score: 72.79 E-value: 7.61e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2199204234 8 IFISFIIPMIVMILATTLSKKlINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIFK-TSDI 86
Cdd:MTH00018 7 LIFSVVLSALFSGASYFLGVK-QPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNqIAPF 85
|
90 100
....*....|....*....|....*....
gi 2199204234 87 MIWTVstMFFIMVLLGGLYHEWNQGALQW 115
Cdd:MTH00018 86 GFWTM--VGFLFILTLGLIYEWIKGGLEW 112
|
|
| ND3 |
MTH00055 |
NADH dehydrogenase subunit 3; Provisional |
32-115 |
3.23e-16 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177128 [Multi-domain] Cd Length: 118 Bit Score: 68.58 E-value: 3.23e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2199204234 32 DREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIFKTSDIM-IWTVstMFFIMVLLGGLYHEWNQ 110
Cdd:MTH00055 35 DSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGLFgFWVM--YLFLIILTIGLIYEWVK 112
|
....*
gi 2199204234 111 GALQW 115
Cdd:MTH00055 113 GGLEW 117
|
|
| ND3 |
MTH00030 |
NADH dehydrogenase subunit 3; Provisional |
7-115 |
1.51e-15 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 164603 [Multi-domain] Cd Length: 123 Bit Score: 67.27 E-value: 1.51e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2199204234 7 SIFISFIIPMIVMILATTLSKKLINDR--------EKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIV 78
Cdd:MTH00030 7 TIFFSTLLGVGIILLLVSISFTLGNSRigltkpdsEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWS 86
|
90 100 110
....*....|....*....|....*....|....*...
gi 2199204234 79 IIFKTSDIM-IWTVSTmfFIMVLLGGLYHEWNQGALQW 115
Cdd:MTH00030 87 IVFNQLNLFsFWIVYT--FLIVLAIGLAYEWIKGGLEW 122
|
|
| PRK07756 |
PRK07756 |
NADH-quinone oxidoreductase subunit A; |
8-115 |
3.46e-09 |
|
NADH-quinone oxidoreductase subunit A;
Pssm-ID: 169084 [Multi-domain] Cd Length: 122 Bit Score: 50.51 E-value: 3.46e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2199204234 8 IFISFIIPMIVMILATTLSKKL---INDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIFKTS 84
Cdd:PRK07756 12 VLIFLLLGILLPVVALTLGRMLrpnKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYDKL 91
|
90 100 110
....*....|....*....|....*....|.
gi 2199204234 85 DIMIwTVSTMFFIMVLLGGLYHEWNQGALQW 115
Cdd:PRK07756 92 GLFA-LIEMLIFVVMLLVGLAYAWKKKVLQW 121
|
|
| PRK08489 |
PRK08489 |
NAD(P)H-quinone oxidoreductase subunit 3; |
1-115 |
5.78e-09 |
|
NAD(P)H-quinone oxidoreductase subunit 3;
Pssm-ID: 181448 [Multi-domain] Cd Length: 129 Bit Score: 50.05 E-value: 5.78e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2199204234 1 MLILSTSIFIsfiipmIVMILATTLSKKLIN---DREKSSPFECGFDP-KSSARMpfSLRFFLIAVIFLIFDVEIALILP 76
Cdd:PRK08489 16 LLVLTFVAFF------LTTRLARFISRKLAQkntEKLKLAIYECGPEPvKQPNRI--SSHFYIMALLFILFDVEIVFMFP 87
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 2199204234 77 IVIIFKtsDIMIWTVSTMF-FIMVLLGGLYHEWNQGALQW 115
Cdd:PRK08489 88 WAVDFK--LLGLFGLIEMLlFIVLLTIGFIYAWKKGALEW 125
|
|
| PRK07928 |
PRK07928 |
NADH dehydrogenase subunit A; Validated |
19-115 |
2.00e-07 |
|
NADH dehydrogenase subunit A; Validated
Pssm-ID: 181171 [Multi-domain] Cd Length: 119 Bit Score: 45.82 E-value: 2.00e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2199204234 19 MILATTLSKKLINdREKSSPFECGFDPKSSARMP--FSLRFFLIAVIFLIFDVEIALILPIVIIFKTSDIMIWTVSTMFF 96
Cdd:PRK07928 22 VVVASLVGPKRYN-RAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYPWAVSFDALGVFGLVEMALFM 100
|
90
....*....|....*....
gi 2199204234 97 IMVLLGGLYhEWNQGALQW 115
Cdd:PRK07928 101 LTVFVAYAY-VWRRGGLEW 118
|
|
| ND3 |
MTH00092 |
NADH dehydrogenase subunit 3; Provisional |
1-115 |
1.23e-06 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177155 Cd Length: 111 Bit Score: 43.73 E-value: 1.23e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2199204234 1 MLILSTSIFISFIIPMIVMILATTLSKKLiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00092 1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKK-FDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVS 79
|
90 100 110
....*....|....*....|....*....|....*
gi 2199204234 81 FKTSDIMIWTVstMFFImvlLGGLYHEWNQGALQW 115
Cdd:MTH00092 80 DFSSLISFFML--MIFI---FFGFYMEWWYGKLIW 109
|
|
| ND3 |
MTH00060 |
NADH dehydrogenase subunit 3; Provisional |
1-115 |
3.79e-04 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177132 Cd Length: 116 Bit Score: 37.18 E-value: 3.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2199204234 1 MLILSTSIFISFIIPMIVMILATTL--SKKLINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIV 78
Cdd:MTH00060 1 MLVLLFVFFVFFLLFLVIYFFHSGLwnNKIYSGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 2199204234 79 ---IIFKTsdimiwTVSTMFFIMVLLGGLYHEWNQGALQW 115
Cdd:MTH00060 81 fqgLLFYN------FWYYYFFLLLLFLGFVVELFSGYVRW 114
|
|
| PRK06432 |
PRK06432 |
NADH dehydrogenase subunit A; Validated |
32-115 |
1.10e-03 |
|
NADH dehydrogenase subunit A; Validated
Pssm-ID: 102372 Cd Length: 144 Bit Score: 36.33 E-value: 1.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2199204234 32 DREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIFKTSDIMIWtVSTMFFIMVLLGGLYHEWNQG 111
Cdd:PRK06432 60 DQSYLEPYESGEVAREIWGGPSINQYYIVVLLFVVFDVDMLLLFPWAFDFKRLGLIPF-IETLIFLAMPLFAVYYAFKMG 138
|
....
gi 2199204234 112 ALQW 115
Cdd:PRK06432 139 YMRW 142
|
|
|