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Conserved domains on  [gi|2235262571|ref|YP_010373086|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Teredorus hainanensis]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009596)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 5.66e-33

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 111.02  E-value: 5.66e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235262571   3 IMLTTMITSVMIATLMMFLSKMISKKKISDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLIFDIEIALILPLIPIFK 82
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 2235262571  83 MSSLFYWLISFSVFIMLLLMGLYYEWNEGVLKW 115
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 5.66e-33

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 111.02  E-value: 5.66e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235262571   3 IMLTTMITSVMIATLMMFLSKMISKKKISDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLIFDIEIALILPLIPIFK 82
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 2235262571  83 MSSLFYWLISFSVFIMLLLMGLYYEWNEGVLKW 115
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 1.44e-26

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 94.41  E-value: 1.44e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235262571  19 MFLSKMISKKKiSDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLIFDIEIALILPLIPIFKMSSLFyWLISFSVFIM 98
Cdd:pfam00507   1 LLLSRLLGPKR-PNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFRELGWF-GFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 2235262571  99 LLLMGLYYEWNEGVLK 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 8-115 1.82e-25

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 92.11  E-value: 1.82e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235262571   8 MITSVMIATLMMFLSKMISKKKiSDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLIFDIEIALILPLIPIFKMSSLF 87
Cdd:COG0838    12 LLVALGLALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWF 90

                          90       100
                  ....*....|....*....|....*...
gi 2235262571  88 YwLISFSVFIMLLLMGLYYEWNEGVLKW 115
Cdd:COG0838    91 G-LIEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 5.66e-33

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 111.02  E-value: 5.66e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235262571   3 IMLTTMITSVMIATLMMFLSKMISKKKISDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLIFDIEIALILPLIPIFK 82
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 2235262571  83 MSSLFYWLISFSVFIMLLLMGLYYEWNEGVLKW 115
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 5.77e-32

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 108.79  E-value: 5.77e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235262571   1 MKIMLTTMITSVMIATLMMFLSKMISKKKISDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLIFDIEIALILPLIPI 80
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2235262571  81 FKMSSLFYWLISFSVFIMLLLMGLYYEWNEGVLKWA 116
Cdd:MTH00148   81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWV 116
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-116 7.80e-28

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 98.14  E-value: 7.80e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235262571   1 MKIMLTTMITSVMIATLMMFLSKMISKKKISDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLIFDIEIALILPLIPI 80
Cdd:MTH00202    1 MLLILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2235262571  81 FKMSSLFYWLISFSVFIMLLLMGLYYEWNEGVLKWA 116
Cdd:MTH00202   81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWV 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 1.44e-26

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 94.41  E-value: 1.44e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235262571  19 MFLSKMISKKKiSDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLIFDIEIALILPLIPIFKMSSLFyWLISFSVFIM 98
Cdd:pfam00507   1 LLLSRLLGPKR-PNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFRELGWF-GFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 2235262571  99 LLLMGLYYEWNEGVLK 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 3.71e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 93.83  E-value: 3.71e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235262571   1 MKIMLTTMITSVMIATLMMFLSKMISkkkisDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLIFDIEIALILPLIPI 80
Cdd:MTH00136    5 TTILTITIALSLILAIVSFWLPQMTP-----DHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWG 79

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2235262571  81 FKMSSLFYWLISFSVFIMLLLMGLYYEWNEGVLKWA 116
Cdd:MTH00136   80 DQLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWA 115
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 8-115 1.82e-25

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 92.11  E-value: 1.82e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235262571   8 MITSVMIATLMMFLSKMISKKKiSDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLIFDIEIALILPLIPIFKMSSLF 87
Cdd:COG0838    12 LLVALGLALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWF 90

                          90       100
                  ....*....|....*....|....*...
gi 2235262571  88 YwLISFSVFIMLLLMGLYYEWNEGVLKW 115
Cdd:COG0838    91 G-LIEMLVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-117 1.86e-25

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 92.23  E-value: 1.86e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235262571   1 MKIMLTTMITSVMIATLMMFLSKMISKKKISDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLIFDIEIALILPLIPI 80
Cdd:MTH00012    1 MSLMMIPMMISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 2235262571  81 FKMSSLFYWLISFSVFIMLLLMGLYYEWNEGVLKWAT 117
Cdd:MTH00012   81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWSS 117
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 4-116 9.06e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 90.33  E-value: 9.06e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235262571   4 MLTTMITSVMIATLMMFLSKMISKKKiSDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLIFDIEIALILPLIPIFKM 83
Cdd:MTH00113    3 LISMLTISLALSTILTTLNFWLTQTK-PDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAINL 81

                          90       100       110
                  ....*....|....*....|....*....|...
gi 2235262571  84 SSLFYWLISFSVFIMLLLMGLYYEWNEGVLKWA 116
Cdd:MTH00113   82 TTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 4-116 3.23e-24

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 88.89  E-value: 3.23e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235262571   4 MLTTMITSVMIATLMMFLSKMISKKKISDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLIFDIEIALILPLIPIFKM 83
Cdd:MTH00042    3 NLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATLI 82

                          90       100       110
                  ....*....|....*....|....*....|...
gi 2235262571  84 SSLFYWLISFSVFIMLLLMGLYYEWNEGVLKWA 116
Cdd:MTH00042   83 TNPSTLLPISLIFLIILTIGLVYEWVNGGLEWA 115
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 3-116 7.32e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 88.13  E-value: 7.32e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235262571   3 IMLTTMITSVMIATLMMFLSKMISKKKiSDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLIFDIEIALILPLIPIFK 82
Cdd:MTH00069    1 LIMLMLLISTILSLILITISFWLPLNN-PDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQ 79

                          90       100       110
                  ....*....|....*....|....*....|....
gi 2235262571  83 MSSLFYWLISFSVFIMLLLMGLYYEWNEGVLKWA 116
Cdd:MTH00069   80 LNTPTNTLFWSTLILILLTLGLIYEWIQGGLEWA 113
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 8-116 1.26e-21

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 82.60  E-value: 1.26e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235262571   8 MITSVMIATLMMFLSKMISKKKiSDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLIFDIEIALILPLIPIFKMSSLF 87
Cdd:PRK06602   15 LIVAIGLGILLLVAGKLLGPRA-PDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSFREIGWL 93

                          90       100
                  ....*....|....*....|....*....
gi 2235262571  88 YwLISFSVFIMLLLMGLYYEWNEGVLKWA 116
Cdd:PRK06602   94 G-FVEAMIFILVLLVGLVYLWRKGALDWE 121
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-115 2.85e-21

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 81.48  E-value: 2.85e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235262571   1 MKIMLTTMITSVMIATLMMFLSKMISKKKIsDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLIFDIEIALILPLipI 80
Cdd:MTH00203    1 MNLIMLFFLIALLLSLILLFIAFWLPKVNP-DGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPL--P 77

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 2235262571  81 FKMSSLFYWLISFSVFIMLLLMGLYYEWNEGVLKW 115
Cdd:MTH00203   78 WSNQLSSLSLLLAFLFLILLTLGLIYEWLQGGLEW 112
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 4-116 2.46e-20

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 79.21  E-value: 2.46e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235262571   4 MLTTMITSVMIATLMMFLSKMISKKKISdREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLIFDIEIALILPLIPIFKM 83
Cdd:MTH00106    3 LMLTLLTNTLLASLLVLIAFWLPQLNIY-SEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQT 81

                          90       100       110
                  ....*....|....*....|....*....|...
gi 2235262571  84 SSLFYWLISFSVFIMLLLMGLYYEWNEGVLKWA 116
Cdd:MTH00106   82 NNLNTMLTMALLLISLLALSLAYEWTQKGLEWT 114
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 4-115 3.24e-19

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 76.25  E-value: 3.24e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235262571   4 MLTTMITSVMIATLMMFLSKMISKKkISDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLIFDIEIALILPLIPIFKM 83
Cdd:MTH00018    3 LFILLIFSVVLSALFSGASYFLGVK-QPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQ 81

                          90       100       110
                  ....*....|....*....|....*....|...
gi 2235262571  84 SSLF-YWLIsfSVFIMLLLMGLYYEWNEGVLKW 115
Cdd:MTH00018   82 IAPFgFWTM--VGFLFILTLGLIYEWIKGGLEW 112
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 11-115 1.26e-16

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 69.74  E-value: 1.26e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235262571  11 SVMIATLMMFLSKMISKKKiSDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLIFDIEIALILPLIPIFKMSSLF-YW 89
Cdd:MTH00055   15 SIGLSTVISGASYIVGVKQ-PDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGLFgFW 93

                          90       100
                  ....*....|....*....|....*.
gi 2235262571  90 LISFsvFIMLLLMGLYYEWNEGVLKW 115
Cdd:MTH00055   94 VMYL--FLIILTIGLIYEWVKGGLEW 117
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 2-115 5.33e-14

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 63.03  E-value: 5.33e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235262571   2 KIMLTTMITSVMIATLMMFLSKMISKKKIS----DREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLIFDIEIALILPL 77
Cdd:MTH00030    6 KTIFFSTLLGVGIILLLVSISFTLGNSRIGltkpDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPW 85

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 2235262571  78 IPIFKMSSLFYWLISFSvFIMLLLMGLYYEWNEGVLKW 115
Cdd:MTH00030   86 SIVFNQLNLFSFWIVYT-FLIVLAIGLAYEWIKGGLEW 122
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
16-115 3.33e-12

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 58.52  E-value: 3.33e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235262571  16 TLMMFLSKMISKK---KISDREKLSPFECGFNPqTHSRLPFSIQFFLISMLFLIFDIEIALILPLIPIFKMSSLFyWLIS 92
Cdd:PRK08489   25 FLTTRLARFISRKlaqKNTEKLKLAIYECGPEP-VKQPNRISSHFYIMALLFILFDVEIVFMFPWAVDFKLLGLF-GLIE 102

                          90       100
                  ....*....|....*....|...
gi 2235262571  93 FSVFIMLLLMGLYYEWNEGVLKW 115
Cdd:PRK08489  103 MLLFIVLLTIGFIYAWKKGALEW 125
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
32-115 5.79e-11

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 55.13  E-value: 5.79e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235262571  32 DREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLIFDIEIALILPLIPIFKMSSLFYwLISFSVFIMLLLMGLYYEWNEG 111
Cdd:PRK07756   39 SAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYDKLGLFA-LIEMLIFVVMLLVGLAYAWKKK 117


                  ....
gi 2235262571 112 VLKW 115
Cdd:PRK07756  118 VLQW 121
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 32-115 6.73e-10

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 52.37  E-value: 6.73e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235262571  32 DREKLSPFECGFNP--QTHSRLPFSIQFFLISMLFLIFDIEIALILPLIPIFKMSSLFyWLISFSVFIMLLLMGLYYEWN 109
Cdd:PRK07928   34 NRAKLEAYECGIEPtpQPAGGGRFPVKYYLTAMLFIVFDIEIVFLYPWAVSFDALGVF-GLVEMALFMLTVFVAYAYVWR 112


                  ....*.
gi 2235262571 110 EGVLKW 115
Cdd:PRK07928  113 RGGLEW 118
ndhC CHL00022
NADH dehydrogenase subunit 3
 3-115 1.73e-07

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 46.13  E-value: 1.73e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235262571   3 IMLTTMITSVMIATLMMFLSKMISKKKiSDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLIFDIEIALILPLIPIFK 82
Cdd:CHL00022    9 IFWAFLIISSLIPILAFLISGLLAPIS-KGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFD 87

                          90       100       110
                  ....*....|....*....|....*....|...
gi 2235262571  83 MSSLFYWLISFsVFIMLLLMGLYYEWNEGVLKW 115
Cdd:CHL00022   88 VLGVSAFIEAL-IFVLILIVGLVYAWRKGALEW 119
PRK06432 PRK06432
NADH dehydrogenase subunit A; Validated
 31-115 9.72e-06

NADH dehydrogenase subunit A; Validated


Pssm-ID: 102372  Cd Length: 144  Bit Score: 41.72  E-value: 9.72e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235262571  31 SDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLIFDIEIALILPLIPIFKMSSLFYWlISFSVFIMLLLMGLYYEWNE 110
Cdd:PRK06432   59 SDQSYLEPYESGEVAREIWGGPSINQYYIVVLLFVVFDVDMLLLFPWAFDFKRLGLIPF-IETLIFLAMPLFAVYYAFKM 137


                  ....*
gi 2235262571 111 GVLKW 115
Cdd:PRK06432  138 GYMRW 142
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-115 7.34e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 39.11  E-value: 7.34e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235262571   1 MKIMLTTMITSVMIATLMMFLSKMISKKKiSDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLIFDIEIALILplipi 80
Cdd:MTH00092    1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKK-FDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFL----- 74

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 2235262571  81 FKMSSLFYWLISFSVFIMLLLMGLYYEWNEGVLKW 115
Cdd:MTH00092   75 GLLVSDFSSLISFFMLMIFIFFGFYMEWWYGKLIW 109
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 30-115 1.78e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 37.95  E-value: 1.78e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235262571  30 ISDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLIFDIEIALilpLIPIFKMSSLFYWLISFSVFIMLLLMGLYYEWN 109
Cdd:MTH00060   32 SGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISL---LLNMPFQGLLFYNFWYYYFFLLLLFLGFVVELF 108


                  ....*.
gi 2235262571 110 EGVLKW 115
Cdd:MTH00060  109 SGYVRW 114
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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