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Conserved domains on  [gi|2235262588|ref|YP_010373102|]
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NADH dehydrogenase subunit 4L (mitochondrion) [Teredorus bashanensis]

Protein Classification

NADH dehydrogenase subunit 4L( domain architecture ID 10009597)

NADH dehydrogenase subunit 4L is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (complex I) that is believed to belong to the minimal assembly required for catalysis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 14-90 1.37e-12

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 177218  Cd Length: 89  Bit Score: 57.86  E-value: 1.37e-12
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2235262588 14 SGLYVFCSVRKHLLLVLLSLEYMVLSVFFLVFLLLEIYGYLNSFLVIYLIFSVCEGALGLSVLVGMIRSEGNDYVFS 90
Cdd:MTH00162  13 SGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSHGNDYFSS 89
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 14-90 1.37e-12

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 57.86  E-value: 1.37e-12
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2235262588 14 SGLYVFCSVRKHLLLVLLSLEYMVLSVFFLVFLLLEIYGYLNSFLVIYLIFSVCEGALGLSVLVGMIRSEGNDYVFS 90
Cdd:MTH00162  13 SGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSHGNDYFSS 89
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 14-90 1.37e-12

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 57.86  E-value: 1.37e-12
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2235262588 14 SGLYVFCSVRKHLLLVLLSLEYMVLSVFFLVFLLLEIYGYLNSFLVIYLIFSVCEGALGLSVLVGMIRSEGNDYVFS 90
Cdd:MTH00162  13 SGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSHGNDYFSS 89
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 14-88 2.86e-06

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 41.75  E-value: 2.86e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2235262588 14 SGLYVFCSVRKHLLLVLLSLEYMVLSVFFLVFLLLEIYGYLNSFLVIYLIFSVCEGALGLSVLVGMIRSEGNDYV 88
Cdd:MTH00149  15 MGVFALLFQYKHLLSILLSLEALMLSLLVMMFSSSGLISFSSYLFLIILTFGACEASLGLSLLVSLIRLHGNDYV 89
ND4L MTH00013
NADH dehydrogenase subunit 4L; Validated
 13-90 7.52e-05

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 133655  Cd Length: 97  Bit Score: 38.19  E-value: 7.52e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2235262588 13 YSGLYVFCSVRKHLLLVLLSLEYMVLSVFFLVFLLLEIYGYLNSFL-VIYLIFSVCEGALGLSVLVGMIRSEGNDYVFS 90
Cdd:MTH00013  13 FISMFNLSLQRKHLLMSLLSLEAMILSLALFIPLSLMFANQVNGMLaIVLLTFGACEASLGLSLLVLMTRSYGNDMLKS 91
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 15-96 3.06e-04

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 36.49  E-value: 3.06e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2235262588 15 GLYVFCSVRKHLLLVLLSLEYMVLSVFFLVFLLLEIYGYLNSFLVIYLIFSVCEGALGLSVLVGMIRSEGNDYVFSSFVF 94
Cdd:MTH00188  16 GLFTFLLNRKHLLMLLLSLEAIMLSLFWFLLVGLSYMEKELYLSLVLLTFAACEASVGLALLVSLIRSHGSDYVSSLNLI 95


                 ..
gi 2235262588 95 MC 96
Cdd:MTH00188  96 KC 97
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 23-87 8.98e-04

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 35.21  E-value: 8.98e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2235262588 23 RKHLLLVLLSLEYMVLSVFFLVFLLLEIYGYLNSFL--VIYLIFSVCEGALGLSVLVGMIRSEGNDY 87
Cdd:MTH00125  23 RTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPmpIILLTFSACEAGTGLALLVATTRTHGSDH 89
ND4L MTH00107
NADH dehydrogenase subunit 4L; Provisional
 23-88 1.68e-03

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177169  Cd Length: 98  Bit Score: 34.52  E-value: 1.68e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2235262588 23 RKHLLLVLLSLEYMVLSVFFLVFLLLEIYGYLNSFLV--IYLIFSVCEGALGLSVLVGMIRSEGNDYV 88
Cdd:MTH00107  23 RSHLMSSLLCLEGMMLSLFIMATLTILNTHFTLASMMpiILLVFAACEAAVGLALLVMVSNTYGTDYV 90
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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