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Conserved domains on  [gi|2431519343|ref|YP_010620162|]
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ATP synthase F1 subunit 6 (mitochondrion) [Herposiphonia versicolor]

Protein Classification

FoF1 ATP synthase subunit a( domain architecture ID 116)

FoF1 ATP synthase subunit a is part of the membrane proton channel (Fo complex) of the F-type ATPase that produces ATP from ADP in the presence of a proton gradient across the membrane; it plays a direct role in the translocation of protons across the membrane

Gene Ontology:  GO:0045263|GO:0015078|GO:0015986
PubMed:  11533110|12370007|30901262

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP-synt_Fo_a_6 super family cl00413
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 5-250 9.56e-55

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


The actual alignment was detected with superfamily member MTH00175:

Pssm-ID: 469762  Cd Length: 244  Bit Score: 175.97  E-value: 9.56e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343   5 ASPLEQFEIINLIPIYFYSFNLSFTNASLSLFLVMCITFFWLSlsFFKVKLIPNYWQLIHEELYFLTSNIVSENLNSKGE 84
Cdd:MTH00175    3 AAYFDQFNIIRLITIQAFLGDWLVTFTNSSMMMVLAVIIFWLL--LKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQ 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343  85 IYFPFIFTLHLFLLFSNLVGMVPYSFTVTSHIAFTFGLSLSIFIGINIIGLKTHGLNFFSLFLPRNVPLIIVPLLISIEF 164
Cdd:MTH00175   81 KYFPFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIET 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343 165 LSYIVKVFTLAIRLFANMTSGHTLLKIIAGFAWTMLISGGLfsFLHLIPLGLLFILIGLELAIAILQAYVFTLLTCIYLN 244
Cdd:MTH00175  161 LSYLIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNGLI--ILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYLG 238


                  ....*.
gi 2431519343 245 DVLDLH 250
Cdd:MTH00175  239 DTIALH 244
 
Name Accession Description Interval E-value
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 5-250 9.56e-55

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 175.97  E-value: 9.56e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343   5 ASPLEQFEIINLIPIYFYSFNLSFTNASLSLFLVMCITFFWLSlsFFKVKLIPNYWQLIHEELYFLTSNIVSENLNSKGE 84
Cdd:MTH00175    3 AAYFDQFNIIRLITIQAFLGDWLVTFTNSSMMMVLAVIIFWLL--LKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQ 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343  85 IYFPFIFTLHLFLLFSNLVGMVPYSFTVTSHIAFTFGLSLSIFIGINIIGLKTHGLNFFSLFLPRNVPLIIVPLLISIEF 164
Cdd:MTH00175   81 KYFPFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIET 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343 165 LSYIVKVFTLAIRLFANMTSGHTLLKIIAGFAWTMLISGGLfsFLHLIPLGLLFILIGLELAIAILQAYVFTLLTCIYLN 244
Cdd:MTH00175  161 LSYLIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNGLI--ILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYLG 238


                  ....*.
gi 2431519343 245 DVLDLH 250
Cdd:MTH00175  239 DTIALH 244
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 7-247 5.63e-46

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 153.13  E-value: 5.63e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343   7 PLEQFEIINlipiyfySFNLSFTNASLSLFLVMCITFFWLSLSffkVKLIPNYWQLIHEELYFLTSNIVSENLNSKGEIY 86
Cdd:TIGR01131   1 LFSQFDISP-------ITLFSLTLLSLILLLSLLIFLISSSLS---RWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKF 70

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343  87 FPFIFTLHLFLLFSNLVGMVPYSFTVTSHIAFTFGLSLSIFIGINIIGLKTHGLNFFSLFLPRNVPLIIVPLLISIEFLS 166
Cdd:TIGR01131  71 FPLIFTLFLFILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETIS 150

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343 167 YIVKVFTLAIRLFANMTSGHTLLKIIAGFAWTMLISGGLfsflhLIPLGLLFILIGLELAIAILQAYVFTLLTCIYLNDV 246
Cdd:TIGR01131 151 YLARPISLSVRLFANISAGHLLLTLLSGLLFSLMSSAIF-----ALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDA 225


                  .
gi 2431519343 247 L 247
Cdd:TIGR01131 226 L 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 83-244 6.77e-42

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 140.23  E-value: 6.77e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343  83 GEIYFPFIFTLHLFLLFSNLVGMVPYSFTVTSHIAFTFGLSLSIFIGINIIGLKTHGLNFFSLFLPRNVPLIIVPLLISI 162
Cdd:cd00310     1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343 163 EFLSYIVKVFTLAIRLFANMTSGHTLLKIIAGFAWTMLISGGLFSFLHLIPlgllfiLIGLELAIAILQAYVFTLLTCIY 242
Cdd:cd00310    81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVA------LTLLELFVAFIQAYVFTLLTAVY 154


                  ..
gi 2431519343 243 LN 244
Cdd:cd00310   155 IS 156
ATP-synt_A pfam00119
ATP synthase A chain;
33-244 6.88e-42

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 142.24  E-value: 6.88e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343  33 LSLFLVMCITFFWLSLSFFKV-KLIPNYWQLIHEELYFLTSNIVSENLNSK-GEIYFPFIFTLHLFLLFSNLVGMV---P 107
Cdd:pfam00119   2 LMSLIVALILLLFLLLATRKTkKLVPGRLQNFVEMLVEFVDNIVKDNIGKKkGRKFFPLLLTLFFFILVSNLLGLIpksP 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343 108 YSFTVTSHIAFTFGLSLSIFIGINIIGLKTHGL-NFFSLFLPRNVPLIIVPLLISIEFLSYIVKVFTLAIRLFANMTSGH 186
Cdd:pfam00119  82 GGFTVTADINVTLALALIVFLLVHYYGIKKHGLgGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGH 161

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2431519343 187 TLLKIIAGFAWTMLISGGLFSFlhlIPLGLLFILIGLELAIAILQAYVFTLLTCIYLN 244
Cdd:pfam00119 162 LLLLLLAGLIFALLSAGFLLGV---IPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 30-248 2.46e-40

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 137.90  E-value: 2.46e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343  30 NASLSLFLVMCITFFWLSLSFFKVKLIPNYWQLIHEELYFLTSNIVSENLNSKGEIYFPFIFTLHLFLLFSNLVGMVPYS 109
Cdd:COG0356     1 DTVLMSWLAMLLLLLLFLLATRKLKLVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343 110 FTVTSHIAFTFGLSLSIFIGINIIGLKTHGLNFF--SLFLPRNVPLIivPLLISIEFLSYIVKVFTLAIRLFANMTSGHT 187
Cdd:COG0356    81 FPPTADINVTLALALIVFVLVHYYGIKKKGLGGYlkHLFFPPFPWLA--PLMLPIEIISELARPLSLSLRLFGNMFAGHI 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2431519343 188 LLKIIAGFA--WTMLISGGLFSFLHLIplgllfiligLELAIAILQAYVFTLLTCIYLNDVLD 248
Cdd:COG0356   159 ILLLLAGLApfLLLGVLSLLLPVAWTA----------FELLVGFLQAYIFTMLTAVYISLAVE 211
 
Name Accession Description Interval E-value
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 5-250 9.56e-55

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 175.97  E-value: 9.56e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343   5 ASPLEQFEIINLIPIYFYSFNLSFTNASLSLFLVMCITFFWLSlsFFKVKLIPNYWQLIHEELYFLTSNIVSENLNSKGE 84
Cdd:MTH00175    3 AAYFDQFNIIRLITIQAFLGDWLVTFTNSSMMMVLAVIIFWLL--LKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQ 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343  85 IYFPFIFTLHLFLLFSNLVGMVPYSFTVTSHIAFTFGLSLSIFIGINIIGLKTHGLNFFSLFLPRNVPLIIVPLLISIEF 164
Cdd:MTH00175   81 KYFPFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIET 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343 165 LSYIVKVFTLAIRLFANMTSGHTLLKIIAGFAWTMLISGGLfsFLHLIPLGLLFILIGLELAIAILQAYVFTLLTCIYLN 244
Cdd:MTH00175  161 LSYLIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNGLI--ILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYLG 238


                  ....*.
gi 2431519343 245 DVLDLH 250
Cdd:MTH00175  239 DTIALH 244
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 4-250 1.78e-47

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 157.13  E-value: 1.78e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343   4 SASPLEQFEIINLIPIyfysfnlsfTNASLSLFLVMCITFfwlsLSFFKVKLIPNYWQLIHEELYFLTSNIVSENLNSKG 83
Cdd:MTH00172    2 SSSYFDQFNIVWLIGL---------TNSSIMMILVIIVVL----LLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEG 68

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343  84 EIYFPFIFTLHLFLLFSNLVGMVPYSFTVTSHIAFTFGLSLSIFIGINIIGLKTHGLNFFSLFLPRNVPLIIVPLLISIE 163
Cdd:MTH00172   69 LKYFPFIISLFFFIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIE 148

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343 164 FLSYIVKVFTLAIRLFANMTSGHTLLKIIAGFAWTMLISGGLFSflhLIPLGLLFILIGLELAIAILQAYVFTLLTCIYL 243
Cdd:MTH00172  149 TVSYISRAISLGVRLAANLSAGHLLFAILAGFGFNMLCASGFLS---LFPLLIMVFITLLEIAVAVIQAYVFCLLTTIYL 225


                  ....*..
gi 2431519343 244 NDVLDLH 250
Cdd:MTH00172  226 ADTIVLH 232
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 7-247 5.63e-46

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 153.13  E-value: 5.63e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343   7 PLEQFEIINlipiyfySFNLSFTNASLSLFLVMCITFFWLSLSffkVKLIPNYWQLIHEELYFLTSNIVSENLNSKGEIY 86
Cdd:TIGR01131   1 LFSQFDISP-------ITLFSLTLLSLILLLSLLIFLISSSLS---RWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKF 70

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343  87 FPFIFTLHLFLLFSNLVGMVPYSFTVTSHIAFTFGLSLSIFIGINIIGLKTHGLNFFSLFLPRNVPLIIVPLLISIEFLS 166
Cdd:TIGR01131  71 FPLIFTLFLFILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETIS 150

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343 167 YIVKVFTLAIRLFANMTSGHTLLKIIAGFAWTMLISGGLfsflhLIPLGLLFILIGLELAIAILQAYVFTLLTCIYLNDV 246
Cdd:TIGR01131 151 YLARPISLSVRLFANISAGHLLLTLLSGLLFSLMSSAIF-----ALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDA 225


                  .
gi 2431519343 247 L 247
Cdd:TIGR01131 226 L 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 83-244 6.77e-42

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 140.23  E-value: 6.77e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343  83 GEIYFPFIFTLHLFLLFSNLVGMVPYSFTVTSHIAFTFGLSLSIFIGINIIGLKTHGLNFFSLFLPRNVPLIIVPLLISI 162
Cdd:cd00310     1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343 163 EFLSYIVKVFTLAIRLFANMTSGHTLLKIIAGFAWTMLISGGLFSFLHLIPlgllfiLIGLELAIAILQAYVFTLLTCIY 242
Cdd:cd00310    81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVA------LTLLELFVAFIQAYVFTLLTAVY 154


                  ..
gi 2431519343 243 LN 244
Cdd:cd00310   155 IS 156
ATP-synt_A pfam00119
ATP synthase A chain;
33-244 6.88e-42

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 142.24  E-value: 6.88e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343  33 LSLFLVMCITFFWLSLSFFKV-KLIPNYWQLIHEELYFLTSNIVSENLNSK-GEIYFPFIFTLHLFLLFSNLVGMV---P 107
Cdd:pfam00119   2 LMSLIVALILLLFLLLATRKTkKLVPGRLQNFVEMLVEFVDNIVKDNIGKKkGRKFFPLLLTLFFFILVSNLLGLIpksP 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343 108 YSFTVTSHIAFTFGLSLSIFIGINIIGLKTHGL-NFFSLFLPRNVPLIIVPLLISIEFLSYIVKVFTLAIRLFANMTSGH 186
Cdd:pfam00119  82 GGFTVTADINVTLALALIVFLLVHYYGIKKHGLgGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGH 161

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2431519343 187 TLLKIIAGFAWTMLISGGLFSFlhlIPLGLLFILIGLELAIAILQAYVFTLLTCIYLN 244
Cdd:pfam00119 162 LLLLLLAGLIFALLSAGFLLGV---IPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 30-248 2.46e-40

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 137.90  E-value: 2.46e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343  30 NASLSLFLVMCITFFWLSLSFFKVKLIPNYWQLIHEELYFLTSNIVSENLNSKGEIYFPFIFTLHLFLLFSNLVGMVPYS 109
Cdd:COG0356     1 DTVLMSWLAMLLLLLLFLLATRKLKLVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343 110 FTVTSHIAFTFGLSLSIFIGINIIGLKTHGLNFF--SLFLPRNVPLIivPLLISIEFLSYIVKVFTLAIRLFANMTSGHT 187
Cdd:COG0356    81 FPPTADINVTLALALIVFVLVHYYGIKKKGLGGYlkHLFFPPFPWLA--PLMLPIEIISELARPLSLSLRLFGNMFAGHI 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2431519343 188 LLKIIAGFA--WTMLISGGLFSFLHLIplgllfiligLELAIAILQAYVFTLLTCIYLNDVLD 248
Cdd:COG0356   159 ILLLLAGLApfLLLGVLSLLLPVAWTA----------FELLVGFLQAYIFTMLTAVYISLAVE 211
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 18-250 1.43e-38

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 133.77  E-value: 1.43e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343  18 PIYFYSFNLSFTNASLSLFLVMCITFFWLSLSFFKVKLIPNYWQLIHEELYFLTSNIVSENLNSKGEIYFPFIFTLHLFL 97
Cdd:PRK05815    4 HLIIGFGGFNFDSLLLSVLLGVLILLLFALVATRKLSGVPGGLQNFVEMIVEFVRGQVKDNIGGKGKKFAPLAFTLFLFI 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343  98 LFSNLVGMVP-YSFTVTSHIAFTFGLSLSIFIGINIIGLKTHGL-NFFSLFLPRnvpliIVPLLISIEFLSYIVKVFTLA 175
Cdd:PRK05815   84 LLMNLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGIKKKGLgGYLKEFYLQ-----PHPLLLPIEIISEFSRPISLS 158

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2431519343 176 IRLFANMTSGHTLLKIIAGFAWTMLisgglfsFLHLIPLGLLFILIGLELAIAILQAYVFTLLTCIYLNDVLDLH 250
Cdd:PRK05815  159 LRLFGNMLAGELILALIALLGGAGL-------LLALAPLILPVAWTIFEIFVGTLQAYIFMMLTIVYISMAVEEE 226
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 5-250 4.43e-32

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 117.73  E-value: 4.43e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343   5 ASPLEQFEIINLIPIYFYS----FNLSFTNASLSLFLVMCITFFWLSLSFFKVK--LIPNYWQLIHEELYFLTSNIVSEN 78
Cdd:MTH00174    3 AAYFDQFNIIPIFSIWVYFlsfwINGEFFCFTNTFFMMSFAVFLFYTIGAKGNNntLVPNRILVGLELIYSHFYTVLKDN 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343  79 LNSKGEIYFPFIFTLHLFLLFSNLVGMVPYSFTVTSHIAFTFGLSLSIFIGINIIGLKTHGLNFFSLFLPRNVPLIIVPL 158
Cdd:MTH00174   83 LGNKGGNYLAFVLSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFSILMPQGAPLALAPL 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343 159 LISIEFLSYIVKVFTLAIRLFANMTSGHTLLKIIAGFAWTMLISGGLFSflHLIPLGLLFILIGLELAIAILQAYVFTLL 238
Cdd:MTH00174  163 LTIIETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMINTGILIG--SFVPFAILIFVTILEMAVAIIQAYVFTLL 240

                         250
                  ....*....|..
gi 2431519343 239 TCIYLNDVLDLH 250
Cdd:MTH00174  241 TIVYLRDTVELH 252
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 23-246 3.57e-25

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 99.09  E-value: 3.57e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343  23 SFNLSFTNASLSLFLVMCITFFWLslsffkvklIPNYWQLIHEELYFLTSNIVSENLNSKGEIYFPFIFTLHLFLLFSNL 102
Cdd:MTH00157   14 SFNLSLNWLSTFLGLLFIPSSFWL---------IPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFILFNNF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343 103 VGMVPYSFTVTSHIAFTFGLSLSIFIGINIIGLKTHGLNFFSLFLPRNVPLIIVPLLISIEFLSYIVKVFTLAIRLFANM 182
Cdd:MTH00157   85 LGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLAANM 164

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2431519343 183 TSGHTLLKIIAGFAWTMLISGGLFSFLHLIplgllfILIGLELAIAILQAYVFTLLTCIYLNDV 246
Cdd:MTH00157  165 IAGHLLLTLLGNTGPSLSSMILSILILIQI------LLLILESAVAIIQSYVFSVLSTLYSSEV 222
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 54-245 3.47e-23

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 93.86  E-value: 3.47e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343  54 KLIPNYWQLIHEELYFLTSNIVSENLNSKGEIYFPFIFTLHLFLLFSNLVGMVPYSFTVTSHIAFTFGLSLSIFIGINII 133
Cdd:MTH00101   36 RLINNRLISIQQWLIQLTSKQMMTIHNTKGQTWSLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVIT 115

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343 134 GLKTHGLNFFSLFLPRNVPLIIVPLLISIEFLSYIVKVFTLAIRLFANMTSGHTLLKIIAGFAWTML-ISgglfSFLHLI 212
Cdd:MTH00101  116 GFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMsIS----TTTALI 191

                         170       180       190
                  ....*....|....*....|....*....|...
gi 2431519343 213 PLGLLFILIGLELAIAILQAYVFTLLTCIYLND 245
Cdd:MTH00101  192 TFIILILLTILEFAVALIQAYVFTLLVSLYLHD 224
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 25-247 5.36e-23

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 93.17  E-value: 5.36e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343  25 NLSFTNASLSLFLVMCITFFWLSLSFFkvkLIPNYWQLIHEELYFLTSNIVSENLNSKGEIYFPFIFTLHLFLLFSNLVG 104
Cdd:MTH00176   13 NKNIFSMISLSWITLLLFLLLMPSSVW---FCPSKLQVFMLMFSTFLPEMILRSNGSYILGSASIIISLFILVMSLNLSG 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343 105 MVPYSFTVTSHIAFTFGLSLSIFIGINIIGLKTHGLNFFSLFLPRNVPLIIVPLLISIEFLSYIVKVFTLAIRLFANMTS 184
Cdd:MTH00176   90 LIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTLAVRLAANLSA 169

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2431519343 185 GHTLLKIIAGFAWTMLISGGLFSFLHLIPlglLFILIGLELAIAILQAYVFTLLTCIYLNDVL 247
Cdd:MTH00176  170 GHLLLGLLGAAMWGLLPVSPLIGFLLLIV---QILYFMFEIAVCMIQAYVFTLLLSLYLDEHP 229
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 36-244 2.11e-22

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 91.55  E-value: 2.11e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343  36 FLVMCITFFWLSLSFFKVKLIPNYWQLIHEELYFLTSNIVSENLNSKGEIYFPFIFTLHLFLLFSNLVGMVPYSFTVTSH 115
Cdd:MTH00179   19 LLALALLLPWLLFPSLTNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWAVLFLSLMLFLLTLNLLGLLPYTFTPTTQ 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343 116 IAFTFGLSLSIFIGINIIGLKTHGLNFFSLFLPRNVPLIIVPLLISIEFLSYIVKVFTLAIRLFANMTSGHTLLKIIAGF 195
Cdd:MTH00179   99 LSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGVRLTANITAGHLLMHLISSA 178

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 2431519343 196 AWTMLISGGLFSFLhliPLGLLFILIGLELAIAILQAYVFTLLTCIYLN 244
Cdd:MTH00179  179 VFVLMNFMGMVALL---TLLVLFLLTLLEVAVAMIQAYVFVLLLSLYLQ 224
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 36-243 7.01e-21

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 87.72  E-value: 7.01e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343  36 FLVMCITFFWLSLSFfKVKLIPNYWQLIHEELYFLTSNIVSENLNSKGEIYFPFIFTLHLFLLFSNLVGMVPYSFTVTSH 115
Cdd:MTH00035   23 LLSSVIALSWLFFIN-PTNWLPSRSQSIWLTFRQEILKLIFQNTNPNTAPWAGLLTTVFILILSINVLGLFPYAFTSTSH 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343 116 IAFTFGLSLSIFIGINIIGLKTHGLNFFSLFLPRNVPLIIVPLLISIEFLSYIVKVFTLAIRLFANMTSGHTLLKIIAGF 195
Cdd:MTH00035  102 ISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIALGLRLAANLTAGHLLIFLLSTA 181

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*...
gi 2431519343 196 AWtMLISGGLFSFLHLIplgLLFILIGLELAIAILQAYVFTLLTCIYL 243
Cdd:MTH00035  182 IW-ELSNSPLISIITLI---IFFLLFILEIGVACIQAYVFTALVHFYL 225
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 20-245 1.33e-20

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 86.84  E-value: 1.33e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343  20 YFYSFNLSFTNASLSLFLVMCITFFWLSLSFFKVKLIPNYWQLIHEeLYFLTSNIVSENLNSKGEIYFP-FIFTLHLFLL 98
Cdd:MTH00173    5 LFSSFDDHNSSFSSLSFLMWLLSLMSLFFFSSSVWVSSSNLSSVFK-LFVLTVSSQVTRSSGLNLGGFSlLLSSLFLFLI 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343  99 FSNLVGMVPYSFTVTSHIAFTFGLSLSIFIGINIIGLKTHGLNFFSLFLPRNVPLIIVPLLISIEFLSYIVKVFTLAIRL 178
Cdd:MTH00173   84 SLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLTVRL 163

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2431519343 179 FANMTSGHTLLKIIAGFAWTMLISGGLFSFLHLIplGLLFILIGLELAIAILQAYVFTLLTCIYLND 245
Cdd:MTH00173  164 LANISAGHIVLTLIGNYLSSSLFSSSVVSLLLVL--LIQVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 79-243 1.04e-18

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 81.79  E-value: 1.04e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343  79 LNSKGEIYFPFIFTLHLFLLFSNLVGMVPYSFTVTSHIAFTFGLSLSIFIGINIIGLKTHGLNFFSLFLPRNVPLIIVPL 158
Cdd:MTH00120   62 LNKKGHKWALILTSLMLLLLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPA 141

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343 159 LISIEFLSYIVKVFTLAIRLFANMTSGHTLLKIIAGFAWTMLisgGLFSFLHLIPLGLLFILIGLELAIAILQAYVFTLL 238
Cdd:MTH00120  142 LILIETISLLIRPLALGVRLTANLTAGHLLIQLISTATLNLL---PTMPTLSLLTLIILLLLTILELAVAMIQAYVFVLL 218


                  ....*
gi 2431519343 239 TCIYL 243
Cdd:MTH00120  219 LSLYL 223
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 79-243 1.67e-18

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 81.07  E-value: 1.67e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343  79 LNSKGEIYFPFIFTLHLFLLFSNLVGMVPYSFTVTSHIAFTFGLSLSIFIGINIIGLKTHGLNFFSLFLPRNVPLIIVPL 158
Cdd:MTH00132   62 LNVGGHKWALLLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPV 141

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343 159 LISIEFLSYIVKVFTLAIRLFANMTSGHTLLKIIAGFAWTMLisgGLFSFLHLIPLGLLFILIGLELAIAILQAYVFTLL 238
Cdd:MTH00132  142 LIIIETISLFIRPLALGVRLTANLTAGHLLIQLIATAAFVLL---PLMPTVAILTATLLFLLTLLEVAVAMIQAYVFVLL 218


                  ....*
gi 2431519343 239 TCIYL 243
Cdd:MTH00132  219 LSLYL 223
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 79-243 2.54e-18

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 80.78  E-value: 2.54e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343  79 LNSKGEIYFPFIFTLHLFLLFSNLVGMVPYSFTVTSHIAFTFGLSLSIFIGINIIGLKTHGLNFFSLFLPRNVPLIIVPL 158
Cdd:MTH00073   62 LNTPGHKWALILTSLMVFLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPI 141

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343 159 LISIEFLSYIVKVFTLAIRLFANMTSGHTLLKIIAGFAWTMLISGGLFSFLHLIplgLLFILIGLELAIAILQAYVFTLL 238
Cdd:MTH00073  142 LIIIETISLFIRPLALGVRLTANLTAGHLLIQLISTATLVLLPLMPTVSILTMI---VLFLLTLLEIAVAMIQAYVFVLL 218


                  ....*
gi 2431519343 239 TCIYL 243
Cdd:MTH00073  219 LSLYL 223
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 69-243 4.61e-18

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 81.71  E-value: 4.61e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343  69 FLTSNIVSENLNSKGEIYFPFIFTLHLFLLFSNLVGMVPYSFTVTSHIAFTFGLSLSIFIGINIIGLKTHGLNFFSLFLP 148
Cdd:PRK13419  153 FIRLDVAKSNIGHGYEKFLPYLLTVFFFILVCNLLGLVPYGATATGNINVTLTLAVFTFFITQYAAIKAHGIKGYLAHLT 232

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343 149 RNVPLIIVPLLISIEFLSYIVKVFTLAIRLFANMTSGHTLlkIIAGFAWTMLISGGLFSFLHLIPlgLLFILIGLELAIA 228
Cdd:PRK13419  233 GGTHWSLWIIMIPIEFIGLFTKPFALTVRLFANMTAGHIV--ILSLIFISFILKSYIVAVAVSVP--FAIFIYLLELFVA 308

                         170
                  ....*....|....*
gi 2431519343 229 ILQAYVFTLLTCIYL 243
Cdd:PRK13419  309 FLQAYIFTMLSALFI 323
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 27-245 3.61e-17

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 77.85  E-value: 3.61e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343  27 SFTNASLSLFLVMCITFFWLSLSFFKVKLIPNYWQLIHEELYFLTSNI------VSENLNSKGEIYFPFIFTLHLFLLFS 100
Cdd:MTH00005    8 SFDPATNSLFNNLSSTAFWAFNFSIILLLSSSFWITPNRLSSIMSPPKstmhtqLSRTFGKHLKGFSSLISALFTMIILM 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343 101 NLVGMVPYSFTVTSHIAFTFGLSLSIFIGINIIGLKTHGLNFFSLFLPRNVPLIIVPLLISIEFLSYIVKVFTLAIRLFA 180
Cdd:MTH00005   88 NLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPITLSFRLAA 167

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2431519343 181 NMTSGHTLLKIIAGFAWTMLISGGLFSFLHLIplgLLFILIGLELAIAILQAYVFTLLTCIYLND 245
Cdd:MTH00005  168 NMSAGHIVLSLIGIYAASALFSSISSTILLIL---TQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 69-250 1.41e-14

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 72.23  E-value: 1.41e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343  69 FLTSNIVSENLNSKGEIYFPFIFTLHLFLLFSNLVGMVP-----------------------------------YSFTVT 113
Cdd:PRK13417  140 FLRKDIVDESMHGHGHSYYHYIFTLFFFILFCNLMGLVPsvgeltvvasdygglvalgvmdhtphalptfakvwSGITVT 219

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343 114 SHIAFTFGLSLSIFIGINIIGLKTHGLNFFSLFLPRNVPLIIVPLLISIEFL-SYIVKVFTLAIRLFANMTSGHTLLKII 192
Cdd:PRK13417  220 GDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHVIILAL 299

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2431519343 193 AGFAWtMLISGGLFsflhLIPLGLLFILIGLELAIAILQAYVFTLLTCIYLNDVLDLH 250
Cdd:PRK13417  300 MGFIF-QFQSWGIV----PVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLFVGLSMHRH 352
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 16-243 7.15e-13

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 65.92  E-value: 7.15e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343  16 LIPIYFYSFNLSFTNASLSLFLVMCITFFWLSLSFFKVKLIPNYWQLIHEELYFLTSNIVSENLNSKGEIYFPFIFTLHL 95
Cdd:PRK13420    4 LAHVLFHIGPLPITESVLTTWGIMIVLVLASWLTTRRLSLDPGRFQVALEGVVSTIEDAIKEVLPRHARLVLPFVGTLWI 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343  96 FLLFSNLVGMVPYSFTVTSHIAFTFGLSLSIFIGINIIGLKTHGL-NFFSLFLPRNvpliivPLLISIEFLSYIVKVFTL 174
Cdd:PRK13420   84 FILVANLIGLIPGFHSPTADLSVTAALALLVFFSVHWFGIRAEGLrEYLKHYLSPS------PFLLPFHLISEITRTLAL 157

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2431519343 175 AIRLFANMTSghtlLKIIAGFawtMLISGGLFS-----FLHLIPlgllfiliglelaiAILQAYVFTLLTCIYL 243
Cdd:PRK13420  158 AVRLFGNIMS----LELAALL---VLLVAGFLVpvpilMLHIIE--------------ALVQAYIFGMLALIYI 210
PRK13421 PRK13421
F0F1 ATP synthase subunit A; Provisional
 86-243 4.13e-08

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237383  Cd Length: 223  Bit Score: 52.39  E-value: 4.13e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343  86 YFPFIFTLHLFLLFSNLVGMVPYSFTVTSHIAFTFGLSLSIFIGINIIGLKTHGL-NFFSLFLPRNvpliivPLLISIEF 164
Cdd:PRK13421   77 YRALIGTLFLFVLVANWSSLVPGVEPPTAHLETDAALALIVFLATIYYGVRARGVrGYLATFAEPT------WVMIPLNL 150

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2431519343 165 LSYIVKVFTLAIRLFANMTSGHTLLKIIAGFAwtmlisgGLFSFLHLIplgllfiliGLELAIAILQAYVFTLLTCIYL 243
Cdd:PRK13421  151 VEQLTRTFSLIVRLFGNVMSGVFVIGIVLSLA-------GLLVPIPLM---------ALDLLTGAVQAYIFAVLAMVFI 213
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 91-185 1.41e-03

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 38.33  E-value: 1.41e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519343  91 FTLHLFLLFSNLVGMVPYSFTVTSHIAFTFGLSLSIFIGINIIGLKTHGLNFFSLFLPRNVPLIIVPLLISIEFLSYIVK 170
Cdd:MTH00050   27 SVVLFIVLFLFLLYRLPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFVCIAETISYIIR 106

                          90
                  ....*....|....*
gi 2431519343 171 VFTLAIRLFANMTSG 185
Cdd:MTH00050  107 PVVLILRPFINISLG 121
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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