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Conserved domains on  [gi|2431519385|ref|YP_010620202|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Dipterosiphonia australica]

Protein Classification

similar to NADH dehydrogenase I subunit H( domain architecture ID 10002943)

protein similar to NADH dehydrogenase I subunit H

Graphical summary

 Zoom to residue level

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List of domain hits

Name Accession Description Interval E-value
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
1-313 7.54e-147

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


:

Pssm-ID: 440629  Cd Length: 329  Bit Score: 416.45  E-value: 7.54e-147
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385   1 MLHIFLKIFSIILPLLIAVAYITLAERKVMGAIQRRKGPDFVGIFGLLQPLADGLKLFVKETILPSSANSSIFILAPILT 80
Cdd:COG1005     8 LLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILA 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385  81 FLFGLLSWCVIPFDEGLVFADLNIGVLYILAISSLGVYGIIIAGWSSNSKYAFLGALRSTAQMISYEISIGLIVITVLLC 160
Cdd:COG1005    88 FIPALLAFAVIPFGPGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLL 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385 161 VGSLNFSEIVLAQQ-NIWFIIPLFPASLMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMS 239
Cdd:COG1005   168 AGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVS 247
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2431519385 240 SLMAIFFLGGWLPILPLTFFFWIPGSFWFGLKITLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPISLSYIFII 313
Cdd:COG1005   248 ALATTLFLGGWLGPFPILPLGGLPGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLT 321
 
Name Accession Description Interval E-value
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
1-313 7.54e-147

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 416.45  E-value: 7.54e-147
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385   1 MLHIFLKIFSIILPLLIAVAYITLAERKVMGAIQRRKGPDFVGIFGLLQPLADGLKLFVKETILPSSANSSIFILAPILT 80
Cdd:COG1005     8 LLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILA 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385  81 FLFGLLSWCVIPFDEGLVFADLNIGVLYILAISSLGVYGIIIAGWSSNSKYAFLGALRSTAQMISYEISIGLIVITVLLC 160
Cdd:COG1005    88 FIPALLAFAVIPFGPGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLL 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385 161 VGSLNFSEIVLAQQ-NIWFIIPLFPASLMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMS 239
Cdd:COG1005   168 AGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVS 247
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2431519385 240 SLMAIFFLGGWLPILPLTFFFWIPGSFWFGLKITLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPISLSYIFII 313
Cdd:COG1005   248 ALATTLFLGGWLGPFPILPLGGLPGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLT 321
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
4-314 2.01e-139

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 397.26  E-value: 2.01e-139
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385   4 IFLKIFSIILPLLIAVAYITLAERKVMGAIQRRKGPDFVGIFGLLQPLADGLKLFVKETILPSSANSSIFILAPILTFLF 83
Cdd:PRK06076   12 ILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIP 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385  84 GLLSWCVIPFDEGLVFADLNIGVLYILAISSLGVYGIIIAGWSSNSKYAFLGALRSTAQMISYEISIGLIVITVLLCVGS 163
Cdd:PRK06076   92 AFLAWAVIPFGPELVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGS 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385 164 LNFSEIVLAQQNIWFIIPLFPASLMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMSSLMA 243
Cdd:PRK06076  172 LNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALIT 251
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2431519385 244 IFFLGGWLPILPLTffFWIPGSFWFGLKITLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPISLSYIFIIS 314
Cdd:PRK06076  252 TLFLGGWLPPFPLG--GGIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLLTA 320
NADHdh pfam00146
NADH dehydrogenase;
7-313 3.57e-137

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 390.68  E-value: 3.57e-137
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385   7 KIFSIILPLLIAVAYITLAERKVMGAIQRRKGPDFVGIFGLLQPLADGLKLFVKETILPSSANSSIFILAPILTFLFGLL 86
Cdd:pfam00146   1 KILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385  87 SWCVIPFDEGLVFADLNIGVLYILAISSLGVYGIIIAGWSSNSKYAFLGALRSTAQMISYEISIGLIVITVLLCVGSLNF 166
Cdd:pfam00146  81 AFAVIPFGPGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385 167 SEIVLAQQNIWFIIPLFPASLMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMSSLMAIFF 246
Cdd:pfam00146 161 SEIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLF 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2431519385 247 LGGWLPILPltfffwIPGSFWFGLKITLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPISLSYIFII 313
Cdd:pfam00146 241 LGGWLGPFP------LPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLT 301
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
10-307 3.08e-73

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 229.21  E-value: 3.08e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385  10 SIILPLLIAVAYITLAERKVMGAIQRRKGPDFVGIFGLLQPLADGLKLFVKETILPSSANSSIFILAPILTFLFGLLSWC 89
Cdd:NF040610   18 ALIGAVFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLMLV 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385  90 VIPF--------DEGLVFADLNIGVLYILAISSLGVYGIIIAGWSSNSKYAFLGALRSTAQMISYEISIGLIVITVLLCV 161
Cdd:NF040610   98 AIPFgaviingvEYPLVVTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIMA 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385 162 GSLNFSEIVLAQQNIWFIIPLFPASLMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMSSL 241
Cdd:NF040610  178 GSLNIVEIVEAQSPIWFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGSFL 257
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2431519385 242 MAIFFLGGW-LPIL--PLTFFFWIPGSFWFGLKITLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPISL 307
Cdd:NF040610  258 VVLLFLGGWnLPGFvtDIPVLGIILPTLFFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSL 326
 
Name Accession Description Interval E-value
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
1-313 7.54e-147

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 416.45  E-value: 7.54e-147
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385   1 MLHIFLKIFSIILPLLIAVAYITLAERKVMGAIQRRKGPDFVGIFGLLQPLADGLKLFVKETILPSSANSSIFILAPILT 80
Cdd:COG1005     8 LLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILA 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385  81 FLFGLLSWCVIPFDEGLVFADLNIGVLYILAISSLGVYGIIIAGWSSNSKYAFLGALRSTAQMISYEISIGLIVITVLLC 160
Cdd:COG1005    88 FIPALLAFAVIPFGPGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLL 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385 161 VGSLNFSEIVLAQQ-NIWFIIPLFPASLMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMS 239
Cdd:COG1005   168 AGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVS 247
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2431519385 240 SLMAIFFLGGWLPILPLTFFFWIPGSFWFGLKITLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPISLSYIFII 313
Cdd:COG1005   248 ALATTLFLGGWLGPFPILPLGGLPGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLT 321
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
4-314 2.01e-139

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 397.26  E-value: 2.01e-139
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385   4 IFLKIFSIILPLLIAVAYITLAERKVMGAIQRRKGPDFVGIFGLLQPLADGLKLFVKETILPSSANSSIFILAPILTFLF 83
Cdd:PRK06076   12 ILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIP 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385  84 GLLSWCVIPFDEGLVFADLNIGVLYILAISSLGVYGIIIAGWSSNSKYAFLGALRSTAQMISYEISIGLIVITVLLCVGS 163
Cdd:PRK06076   92 AFLAWAVIPFGPELVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGS 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385 164 LNFSEIVLAQQNIWFIIPLFPASLMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMSSLMA 243
Cdd:PRK06076  172 LNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALIT 251
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2431519385 244 IFFLGGWLPILPLTffFWIPGSFWFGLKITLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPISLSYIFIIS 314
Cdd:PRK06076  252 TLFLGGWLPPFPLG--GGIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLLTA 320
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
1-323 2.12e-137

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 392.17  E-value: 2.12e-137
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385   1 MLHIFLKIFSIILPLLIAVAYITLAERKVMGAIQRRKGPDFVGIFGLLQPLADGLKLFVKETILPSSANSSIFILAPILT 80
Cdd:MTH00054    1 MGIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385  81 FLFGLLSWCVIPFDEGLVFADLNIGVLYILAISSLGVYGIIIAGWSSNSKYAFLGALRSTAQMISYEISIGLIVITVLLC 160
Cdd:MTH00054   81 LTLAFIAWGVIPYGEGVVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLC 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385 161 VGSLNFSEIVLAQQNIWFIIPLFPASLMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMSS 240
Cdd:MTH00054  161 VGSLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMST 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385 241 LMAIFFLGGWLPILPLTFFFWipGSFWFGLKITLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPISLSYIFIISSSLLTF 320
Cdd:MTH00054  241 FGVILFLGGWLVISGPTSYFS--NFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGF 318

                  ...
gi 2431519385 321 DWL 323
Cdd:MTH00054  319 NAL 321
NADHdh pfam00146
NADH dehydrogenase;
7-313 3.57e-137

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 390.68  E-value: 3.57e-137
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385   7 KIFSIILPLLIAVAYITLAERKVMGAIQRRKGPDFVGIFGLLQPLADGLKLFVKETILPSSANSSIFILAPILTFLFGLL 86
Cdd:pfam00146   1 KILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385  87 SWCVIPFDEGLVFADLNIGVLYILAISSLGVYGIIIAGWSSNSKYAFLGALRSTAQMISYEISIGLIVITVLLCVGSLNF 166
Cdd:pfam00146  81 AFAVIPFGPGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385 167 SEIVLAQQNIWFIIPLFPASLMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMSSLMAIFF 246
Cdd:pfam00146 161 SEIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLF 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2431519385 247 LGGWLPILPltfffwIPGSFWFGLKITLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPISLSYIFII 313
Cdd:pfam00146 241 LGGWLGPFP------LPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLT 301
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
2-321 4.89e-132

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 378.69  E-value: 4.89e-132
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385   2 LHIFLKIFSIILPLLIAVAYITLAERKVMGAIQRRKGPDFVGIFGLLQPLADGLKLFVKETILPSSANSSIFILAPILTF 81
Cdd:MTH00216    6 IFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSF 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385  82 LFGLLSWCVIPFDEGLVFADLNIGVLYILAISSLGVYGIIIAGWSSNSKYAFLGALRSTAQMISYEISIGLIVITVLLCV 161
Cdd:MTH00216   86 TLALIVWGVIPYERGVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCV 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385 162 GSLNFSEIVLAQQN-IWFIIPLFPASLMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMSS 240
Cdd:MTH00216  166 GSLSITEIVLAQNNgIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSC 245
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385 241 LMAIFFLGGWLPilPLTFFFwiPGSFWFGLKITLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPISLSYIFIISSSLLTF 320
Cdd:MTH00216  246 LTTILFLGGWLS--PIKYFK--GGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFGF 321

                  .
gi 2431519385 321 D 321
Cdd:MTH00216  322 N 322
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
4-321 2.59e-116

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 339.69  E-value: 2.59e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385   4 IFLKIFSIILPLLIAVAYITLAERKVMGAIQRRKGPDFVGIFGLLQPLADGLKLFVKETILPSSANSSIFILAPILTFLF 83
Cdd:MTH00029    9 VTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTL 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385  84 GLLSWCVIPFDEGLVFADLNIGVLYILAISSLGVYGIIIAGWSSNSKYAFLGALRSTAQMISYEISIGLIVITVLLCVGS 163
Cdd:MTH00029   89 AILAWAIVTMDQGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGS 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385 164 LNFSEIVLAQQNIWFIIPLFPASLMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMSSLMA 243
Cdd:MTH00029  169 LNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMT 248
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385 244 IFFLGGWLPIL--PLTFFFW---------IPGSFWFGLKITLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPISLSYIFI 312
Cdd:MTH00029  249 IFFLGGWLSPLdgIPTPPEAfsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVIL 328

                  ....*....
gi 2431519385 313 ISSSLLTFD 321
Cdd:MTH00029  329 TAGILIGFN 337
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
1-308 1.11e-114

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 334.56  E-value: 1.11e-114
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385   1 MLHIfLKIFSIILPLLIAVAYITLAERKVMGAIQRRKGPDFVGIFGLLQPLADGLKLFVKETILPSSANSSIFILAPILT 80
Cdd:MTH00111    5 LLNL-INPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILA 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385  81 FLFGLLSWCVIPFDEGLvfADLNIGVLYILAISSLGVYGIIIAGWSSNSKYAFLGALRSTAQMISYEISIGLIVITVLLC 160
Cdd:MTH00111   84 LLLALTIWTPLPMPFPL--ADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILL 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385 161 VGSLNFSEIVLAQQNIWFIIPLFPASLMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMSS 240
Cdd:MTH00111  162 SGGYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNT 241
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2431519385 241 LMAIFFLGGWLPILPLTFFfwipgSFWFGLKITLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPISLS 308
Cdd:MTH00111  242 LTTILFLNPSTLNLPPELF-----TINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLA 304
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
1-320 9.95e-113

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 329.66  E-value: 9.95e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385   1 MLHIFLKIFSIIlPLLIAVAYITLAERKVMGAIQRRKGPDFVGIFGLLQPLADGLKLFVKETILPSSANSSIFILAPILT 80
Cdd:MTH00071    5 ISLIINPLLYII-PVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMA 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385  81 FLFGLLSWcvIPFDEGLVFADLNIGVLYILAISSLGVYGIIIAGWSSNSKYAFLGALRSTAQMISYEISIGLIVITVLLC 160
Cdd:MTH00071   84 LTLALIIW--TPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILL 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385 161 VGSLNFSEIVLAQQNIWFIIPLFPASLMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMSS 240
Cdd:MTH00071  162 TGGFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNT 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385 241 LMAIFFLGGwlpilplTFFFWIPGSFWFGL--KITLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPISLSY-IFIISSSL 317
Cdd:MTH00071  242 LSTILFLGS-------TYNHLQPELSTMNLmiKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMtIFHISLPI 314

                  ...
gi 2431519385 318 LTF 320
Cdd:MTH00071  315 STL 317
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
4-321 2.83e-111

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 325.78  E-value: 2.83e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385   4 IFLKIFSIILPLLIAVAYITLAERKVMGAIQRRKGPDFVGIFGLLQPLADGLKLFVKETILPSSANSSIFILAPILTFLF 83
Cdd:MTH00040    6 FLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFL 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385  84 GLLSWCVIPFDEGLVfaDLNIGVLYILAISSLGVYGIIIAGWSSNSKYAFLGALRSTAQMISYEISIGLIVITVLLCVGS 163
Cdd:MTH00040   86 ALLLWSLIPVPTPTL--NVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGS 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385 164 LNFSEIVLAQQNIWFIIPLFPASLMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMSSLMA 243
Cdd:MTH00040  164 FSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSV 243
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2431519385 244 IFFLGGWLPILPLTFFfwipGSFWFGLKITLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPISLSYIFIISSSLLTFD 321
Cdd:MTH00040  244 ILFLGGGSPFNEIFPI----NIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLN 317
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
12-310 5.91e-109

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 320.01  E-value: 5.91e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385  12 ILPLLIAVAYITLAERKVMGAIQRRKGPDFVGIFGLLQPLADGLKLFVKETILPSSANSSIFILAPILTFLFGLLSWCVI 91
Cdd:MTH00134   16 IVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLALTLWAPM 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385  92 PFDEGLvfADLNIGVLYILAISSLGVYGIIIAGWSSNSKYAFLGALRSTAQMISYEISIGLIVITVLLCVGSLNFSEIVL 171
Cdd:MTH00134   96 PMPYPV--TDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQTFNT 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385 172 AQQNIWFIIPLFPASLMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMSSLMAIFFLGG-W 250
Cdd:MTH00134  174 AQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILFLGAsH 253
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2431519385 251 LPILP-LTFFFWIpgsfwfgLKITLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPISLSYI 310
Cdd:MTH00134  254 IPTLPeLTTINLM-------TKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALV 307
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
5-308 1.52e-108

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 318.88  E-value: 1.52e-108
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385   5 FLKIFSIILPLLIAVAYITLAERKVMGAIQRRKGPDFVGIFGLLQPLADGLKLFVKETILPSSANSSIFILAPILTFLFG 84
Cdd:MTH00104    3 MINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLA 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385  85 LLSWCVIPFDEGLVfaDLNIGVLYILAISSLGVYGIIIAGWSSNSKYAFLGALRSTAQMISYEISIGLIVITVLLCVGSL 164
Cdd:MTH00104   83 LTMWIPLPMPYPLI--NMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385 165 NFSEIVLAQQNIWFIIPLFPASLMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMSSLMAI 244
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2431519385 245 FFLGGWL-PILPLTFffwipgSFWFGLKITLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPISLS 308
Cdd:MTH00104  241 LFLGAFHnPYMPELY------TTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLA 299
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
1-317 9.92e-108

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 316.43  E-value: 9.92e-108
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385   1 MLHIFLKIFSIILPLLiAVAYITLAERKVMGAIQRRKGPDFVGIFGLLQPLADGLKLFVKETILPSSANSSIFILAPILT 80
Cdd:MTH00143    1 LVSLLSSVFTYLCVLL-AVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLS 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385  81 FLFGLLSWCVIPFDEGLVFADLniGVLYILAISSLGVYGIIIAGWSSNSKYAFLGALRSTAQMISYEISIGLIVITVLLC 160
Cdd:MTH00143   80 LILALLLWQLYPSYFSSSYFGW--GLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFL 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385 161 VGSLNFSEIVLAQQNIWFIIPLFPASLMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMSS 240
Cdd:MTH00143  158 SGSFSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSL 237
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2431519385 241 LMAIFFLGGWlpilpltFFFWIPGSFWFGLKITLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPISLSYIFIISSSL 317
Cdd:MTH00143  238 LTVVLFFGGS-------SVLFLLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVLV 307
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
1-320 2.68e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 310.30  E-value: 2.68e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385   1 MLHIFLKIFSIILPLLIAVAYITLAERKVMGAIQRRKGPDFVGIFGLLQPLADGLKLFVKETILPSSANSSIFILAPILT 80
Cdd:MTH00218    1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385  81 FLFGLLSWCVIPFDEGLVfaDLNIGVLYILAISSLGVYGIIIAGWSSNSKYAFLGALRSTAQMISYEISIGLIVITVLLC 160
Cdd:MTH00218   81 LTLALLLWMPLPLPFSLI--NLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIIL 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385 161 VGSLNFSEIVLAQQNIWFIIPLFPASLMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMSS 240
Cdd:MTH00218  159 TGGFSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNT 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385 241 LMAIFFLGGWLPilpltfffwipgSFWFGLKITLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPISLSYIFIISSSLLTF 320
Cdd:MTH00218  239 LSVILFLGTSLT------------TINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSF 306
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
1-315 1.51e-100

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 297.84  E-value: 1.51e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385   1 MLHIFLKIFSIILPLLIAVAYITLAERKVMGAIQRRKGPDFVGIFGLLQPLADGLKLFVKETILPSSANSSIFILAPILT 80
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385  81 FLFGLLSWCVIPFDEGLVfaDLNIGVLYILAISSLGVYGIIIAGWSSNSKYAFLGALRSTAQMISYEISIGLIVITVLLC 160
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLI--SFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFL 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385 161 VGSLNFSEIVLAQQNIWFIIPLFPASLMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMSS 240
Cdd:MTH00193  159 IGSFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSM 238
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2431519385 241 LMAIFFLGGWLPilpltfffwipgSFWFGLKITLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPISLSYIFIISS 315
Cdd:MTH00193  239 LFVLMFLGGDLL------------SLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFG 301
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
4-318 1.74e-96

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 287.70  E-value: 1.74e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385   4 IFLKIFSIILPLLIAVAYITLAERKVMGAIQRRKGPDFVGIFGLLQPLADGLKLFVKETILPSSANSSIFILAPILTFLF 83
Cdd:MTH00225    3 FLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLIL 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385  84 GLLSWCVIPFdeGLVFADLNIGVLYILAISSLGVYGIIIAGWSSNSKYAFLGALRSTAQMISYEISIGLIVITVLLCVGS 163
Cdd:MTH00225   83 SLILWSLYPS--MFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLT 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385 164 LNFSEIVLAQQNIWFIIPLFPASLMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMSSLMA 243
Cdd:MTH00225  161 YNLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTS 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2431519385 244 IFFLGGWLPILPLTFFfwipgsfwfgLKITLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPISLSYIFIISSSLL 318
Cdd:MTH00225  241 ILFFGGFFVTIDLFLI----------LKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
1-321 1.55e-93

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 280.09  E-value: 1.55e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385   1 MLHIFLKIFSIILPLLIAVAYITLAERKVMGAIQRRKGPDFVGIFGLLQPLADGLKLFVKETILPSSANSSIFILAPILT 80
Cdd:MTH00195    1 WMISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385  81 FLFGLLSWCVIPFDEGlvFADLNIGVLYILAISSLGVYGIIIAGWSSNSKYAFLGALRSTAQMISYEISIGLIVITVLLC 160
Cdd:MTH00195   81 LALALILWVPIPSPFG--FSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICL 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385 161 VGSLNFSEIVLAQQNIWFIIPLFPASLMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMSS 240
Cdd:MTH00195  159 AGSFDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSV 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385 241 LMAIFFLGGwlpilpltfffwiPGSFWFGLKITLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPISLSYIFIISSSLLTF 320
Cdd:MTH00195  239 LTTILFLGG-------------GGTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305

                  .
gi 2431519385 321 D 321
Cdd:MTH00195  306 N 306
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
8-320 7.10e-80

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 245.46  E-value: 7.10e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385   8 IFSIILPLLiAVAYITLAERKVMGAIQRRKGPDFVGIFGLLQPLADGLKLFVKETILPSSANSSIFILAPILTFLFGLLS 87
Cdd:MTH00010   10 LLSYVMALL-AMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLL 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385  88 WCVIPFDEGLVFadLNIGVLYILAISSLGVYGIIIAGWSSNSKYAFLGALRSTAQMISYEISIGLIVITVLLCVGSLNFS 167
Cdd:MTH00010   89 WSLYPHKHPSFF--LKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFS 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385 168 EIVLAQqNIWFIIPLFPASLMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMSSLMAIFFl 247
Cdd:MTH00010  167 KIIMSQ-YSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFF- 244
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2431519385 248 ggwLPILPLTFFfwipGSFWFGLKITLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPISLSYIFIISSSLLTF 320
Cdd:MTH00010  245 ---TSFIPSIFI----SDLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLL 310
ndhA CHL00032
NADH dehydrogenase subunit 1
4-320 5.80e-79

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 244.86  E-value: 5.80e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385   4 IFLKIFSIILPLLIAVAYITLAERKVMGAIQRRKGPDFVGIFGLLQPLADGLKLFVKETILPSSANSSIFILAPILTFLF 83
Cdd:CHL00032   29 ILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVIS 108
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385  84 GLLSWCVIPFDEGLVFADLNIGVLYILAISSLGVYGIIIAGWSSNSKYAFLGALRSTAQMISYEISIGLIVITVLLCVGS 163
Cdd:CHL00032  109 ILLSYLVIPFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNS 188
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385 164 LNFSEIVLAQQ-------NIW-----FIIplfpaslmFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGE 231
Cdd:CHL00032  189 LSTVDIVEAQSkygfwgwNLWrqpigFIV--------FLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVAS 260
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385 232 YANMILMSSLMAIFFLGGW---LPILPLTFFFWIPGSF-----WFGLKITLL-----LFGFIWVRSSFPRYRYDQLMRLG 298
Cdd:CHL00032  261 YLNLLVSSLFVTVLYLGGWnlsIPYIFIPELFEINKTGgvfgtTIGIFITLAktylfLFISITTRWTLPRLRMDQLLNLG 340
                         330       340
                  ....*....|....*....|..
gi 2431519385 299 WKIFLPISLSYIFIISSSLLTF 320
Cdd:CHL00032  341 WKFLLPISLGNLLLTTSFQLLS 362
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
10-307 3.08e-73

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 229.21  E-value: 3.08e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385  10 SIILPLLIAVAYITLAERKVMGAIQRRKGPDFVGIFGLLQPLADGLKLFVKETILPSSANSSIFILAPILTFLFGLLSWC 89
Cdd:NF040610   18 ALIGAVFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLMLV 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385  90 VIPF--------DEGLVFADLNIGVLYILAISSLGVYGIIIAGWSSNSKYAFLGALRSTAQMISYEISIGLIVITVLLCV 161
Cdd:NF040610   98 AIPFgaviingvEYPLVVTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIMA 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385 162 GSLNFSEIVLAQQNIWFIIPLFPASLMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMSSL 241
Cdd:NF040610  178 GSLNIVEIVEAQSPIWFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGSFL 257
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2431519385 242 MAIFFLGGW-LPIL--PLTFFFWIPGSFWFGLKITLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPISL 307
Cdd:NF040610  258 VVLLFLGGWnLPGFvtDIPVLGIILPTLFFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSL 326
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
8-313 6.41e-59

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 190.88  E-value: 6.41e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385   8 IFSIILPLLIAVAYITLAERKVMGAIQRRKGPDFVGIFGLLQPLADGLKLFVKETILPSSANSSIFILAPILTFLFGLLS 87
Cdd:MTH00090    2 LLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLE 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385  88 WCVIPFdeGLVFADLNIGVLYILAISSLGVYGIIIAGWSSNSKYAFLGALRSTAQMISYEISIGLIVITVLLCVGSLNFS 167
Cdd:MTH00090   82 WFVLPY--FFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFV 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385 168 EivlaQQNIWFIIPLFPaslmFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMSSLMAIFFL 247
Cdd:MTH00090  160 S----SFSLSLFVIYLP----FLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFF 231
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2431519385 248 GgwlpilpLTFFFWipgsfwfglkiTLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPISLSYIFII 313
Cdd:MTH00090  232 K-------FSFLML-----------FLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFF 279
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
1-313 1.30e-45

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 156.62  E-value: 1.30e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385   1 MLHIFLKIFSIILPLLIaVAYITLAERKVMGAIQRRKGPDFVGIFGLLQPLADGLKLFVKETILPSSANSSIFILAPILT 80
Cdd:MTH00058    1 IFGLVSGLEGLLIILLL-VAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLL 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385  81 FLFGLLSWCVIPFDEGLVFAdlNIGVLYILAISSLGVYGIIIAGWSSNSKYAFLGALRSTAQMISYEISIGLIVITVLLC 160
Cdd:MTH00058   80 VLLVVFYCFIYGSYYSGSYS--SLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLC 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385 161 VGSLNFSEIVLAQQNIWFIIPLFpaSLMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYANMILMSS 240
Cdd:MTH00058  158 YGSYSLVDFYYSGWLSVLLFPLI--YILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSW 235
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2431519385 241 LMAIFFLGgwlpilpltfffwipGSFWFGLKITLLLFgFIWVRSSFPRYRYDQLMRLGWKIFLPISLSYIFII 313
Cdd:MTH00058  236 LGSVLFFG---------------GGFVSIMLLFHLLF-FMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVI 292
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
1-313 1.81e-39

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 140.70  E-value: 1.81e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385   1 MLHIFLKIFSIILPLLIAVAYITLAeRKVMGAIQRRKGPdfvgifGLLQPLADGLKLFVKETILPSSAnSSIFILAPILT 80
Cdd:COG0650     1 MMLILLALLQLLLALLLAPLLLGII-RKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETA-SWLFRAAPYVA 72
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385  81 FLFGLLSWCVIPF---DEGLVFADLNIGVLYILAISSLGvygIIIAGWSSNSKYAFLGALRSTAQMISYEISIGLIVITV 157
Cdd:COG0650    73 LAAMLLAALLVPVlttGPPLSFSGDLIVLVYLLALARFF---LALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFAL 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385 158 LLCVGSLNFSEIVLAQQN---IWFIIPLFPASLMFYISILAETNRAPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYAN 234
Cdd:COG0650   150 ALLAGSTSLSDIVAYQAAhgpLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALK 229
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2431519385 235 MILMSSL-MAIFFLGGWLPILPLTFffwipgsFWFGLKITLLLFGFIWVRSSFPRYRYDQLMRLGWKIFLPISLSYIFII 313
Cdd:COG0650   230 LFVLLSLfVNLFLPWGIALTLLLAL-------LLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAV 302
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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