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Conserved domains on  [gi|2452623406|ref|YP_010693619|]
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NADH dehydrogenase subunit 6 (mitochondrion) [Gryllotalpa henana]

Protein Classification

NADH dehydrogenase subunit 6( domain architecture ID 10009599)

NADH dehydrogenase subunit 6 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND6 MTH00166
NADH dehydrogenase subunit 6; Provisional
 2-171 1.28e-31

NADH dehydrogenase subunit 6; Provisional


:

Pssm-ID: 214445  Cd Length: 160  Bit Score: 111.44  E-value: 1.28e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623406   2 MNILIFMLFLSSLIFIQLNHPLSITINIIIHTLITCLITGYMSSTFWFSYILFMIFLGGMLVLFLYITSLASNEMFDIPF 81
Cdd:MTH00166    1 KMMLMMLLLILSIIFLFLNHPLSMGLILIIQTILISLLLGLMMKSFWFSYILFLIFLGGMLVLFIYITSLASNEKFKFSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623406  82 NMFLLIPMILlailmlpllepFITTPQINSTDMIPSHWLNWSFTPIQPFLMKIYNYPTHLITITLVFYLLLTLVVIVKIT 161
Cdd:MTH00166   81 KLLILFLLML-----------LLMLNNFIKNSEMSNFNNNFNFFENSFSLSKLYNFPTMLITLFMIIYLLLTLIVVVKIT 149

                         170
                  ....*....|
gi 2452623406 162 DIFKGPLRQS 171
Cdd:MTH00166  150 NIFKGPLRSK 159
 
Name Accession Description Interval E-value
ND6 MTH00166
NADH dehydrogenase subunit 6; Provisional
 2-171 1.28e-31

NADH dehydrogenase subunit 6; Provisional


Pssm-ID: 214445  Cd Length: 160  Bit Score: 111.44  E-value: 1.28e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623406   2 MNILIFMLFLSSLIFIQLNHPLSITINIIIHTLITCLITGYMSSTFWFSYILFMIFLGGMLVLFLYITSLASNEMFDIPF 81
Cdd:MTH00166    1 KMMLMMLLLILSIIFLFLNHPLSMGLILIIQTILISLLLGLMMKSFWFSYILFLIFLGGMLVLFIYITSLASNEKFKFSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623406  82 NMFLLIPMILlailmlpllepFITTPQINSTDMIPSHWLNWSFTPIQPFLMKIYNYPTHLITITLVFYLLLTLVVIVKIT 161
Cdd:MTH00166   81 KLLILFLLML-----------LLMLNNFIKNSEMSNFNNNFNFFENSFSLSKLYNFPTMLITLFMIIYLLLTLIVVVKIT 149

                         170
                  ....*....|
gi 2452623406 162 DIFKGPLRQS 171
Cdd:MTH00166  150 NIFKGPLRSK 159
 
Name Accession Description Interval E-value
ND6 MTH00166
NADH dehydrogenase subunit 6; Provisional
 2-171 1.28e-31

NADH dehydrogenase subunit 6; Provisional


Pssm-ID: 214445  Cd Length: 160  Bit Score: 111.44  E-value: 1.28e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623406   2 MNILIFMLFLSSLIFIQLNHPLSITINIIIHTLITCLITGYMSSTFWFSYILFMIFLGGMLVLFLYITSLASNEMFDIPF 81
Cdd:MTH00166    1 KMMLMMLLLILSIIFLFLNHPLSMGLILIIQTILISLLLGLMMKSFWFSYILFLIFLGGMLVLFIYITSLASNEKFKFSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623406  82 NMFLLIPMILlailmlpllepFITTPQINSTDMIPSHWLNWSFTPIQPFLMKIYNYPTHLITITLVFYLLLTLVVIVKIT 161
Cdd:MTH00166   81 KLLILFLLML-----------LLMLNNFIKNSEMSNFNNNFNFFENSFSLSKLYNFPTMLITLFMIIYLLLTLIVVVKIT 149

                         170
                  ....*....|
gi 2452623406 162 DIFKGPLRQS 171
Cdd:MTH00166  150 NIFKGPLRSK 159
ND6 MTH00152
NADH dehydrogenase subunit 6; Provisional
 4-169 1.93e-11

NADH dehydrogenase subunit 6; Provisional


Pssm-ID: 214437  Cd Length: 163  Bit Score: 59.13  E-value: 1.93e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623406   4 ILIFMLFLSSLIFIQLNHPLSITINIIIHTLITCLITGYMSStFWFSYILFMIFLGGMLVLFLYITSLASNEMFDIPFNM 83
Cdd:MTH00152    5 ILLSVCFSLFLLLPLSKQPLSLGLVLLLLSLFVCVEIGLTLS-SWYGYLLFLVYVGGLLVMFAYVVSLSPNPLFGSNFKF 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623406  84 FLLIPMILLAILMLPLLEPFITTPQINSTDMIPSHWLNWSFTPIqpflmkIYNYPTHLITITLVFYLLLTLVVIVKITDI 163
Cdd:MTH00152   84 VFFSLTLFGFLGLFFFFLYLYSSGGLSLSSLFDGSSGSLSFGGG------LYSSSGWSIFVFLAVLLLIVMVSVVKICYY 157


                  ....*.
gi 2452623406 164 FKGPLR 169
Cdd:MTH00152  158 EEGSLR 163
ND6 MTH00212
NADH dehydrogenase subunit 6; Provisional
 2-170 4.12e-11

NADH dehydrogenase subunit 6; Provisional


Pssm-ID: 214460  Cd Length: 160  Bit Score: 58.09  E-value: 4.12e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623406   2 MNILIFMLFLSSLIFIQLNHPLSITINIIIHTLITCLITGyMSSTFWFSYILFMIFLGGMLVLFLYITSLASNEMF--DI 79
Cdd:MTH00212    3 LSLLLSLLLLLMLLFPLSAHPLTLGVSLLLSSLLSCLIIT-MESNSWYGYILFLIYIGGLLVLFGYMVALSPNEHLffKK 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623406  80 PFNMFLLIPMILLAILMLPLLEPFITTPQINSTdmipshwlnwsftpIQPFLMKIYNYPTHLITITLVFYLLLTLVVIVK 159
Cdd:MTH00212   82 YFKGFGMILISLNLYLLLMTLGSSNFSPMLNLK--------------LELNVSKILSNNNIPILLFLGLILLIALLMVVK 147

                         170
                  ....*....|.
gi 2452623406 160 ITDIFKGPLRQ 170
Cdd:MTH00212  148 ICQYYKGPLRP 158
ND6 MTH00138
NADH dehydrogenase subunit 6; Provisional
 50-73 9.15e-04

NADH dehydrogenase subunit 6; Provisional


Pssm-ID: 177196  Cd Length: 173  Bit Score: 37.81  E-value: 9.15e-04
                          10        20
                  ....*....|....*....|....
gi 2452623406  50 SYILFMIFLGGMLVLFLYITSLAS 73
Cdd:MTH00138   52 SLVLFLIYLGGMLVVFAYSAALAA 75
ND6 MTH00115
NADH dehydrogenase subunit 6; Provisional
 37-73 5.51e-03

NADH dehydrogenase subunit 6; Provisional


Pssm-ID: 214424  Cd Length: 174  Bit Score: 35.88  E-value: 5.51e-03
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 2452623406  37 CLITGYMSSTFwFSYILFMIFLGGMLVLFLYITSLAS 73
Cdd:MTH00115   40 CGVLVSLGGSF-VSLVLFLVYLGGMLVVFAYSVSLAA 75
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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