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Conserved domains on  [gi|2452623408|ref|YP_010693621|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Gryllotalpa henana]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 3-308 1.89e-152

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 429.19  E-value: 1.89e-152
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408   3 FIMMVLGGVFLIVGVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGLPQPFSDAVKLFTSEQAWPELSNYFLYYFSPVFS 82
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408  83 LFLSLLVWMIFPYFTNLFSFSLGILFFLCCTGMGVYGVMIAGWSSNSNYALLGGLRAVAQTISYEVSLVLLLMSFILLVE 162
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408 163 SFDLLMFSEYQSGFWFIFIGLPLGMCWLSSCLAETNRTPFDFAEGESELVSGFNVEYSGGGFALIFLAEYASILFMSVLF 242
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2452623408 243 SLIFLGGNVMMFMFYVKLMLLSFVFVWVRGTLPRFRYDKLMYLAWSSYLPVSLYFLIFFVGVKLLV 308
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 3-308 1.89e-152

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 429.19  E-value: 1.89e-152
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408   3 FIMMVLGGVFLIVGVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGLPQPFSDAVKLFTSEQAWPELSNYFLYYFSPVFS 82
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408  83 LFLSLLVWMIFPYFTNLFSFSLGILFFLCCTGMGVYGVMIAGWSSNSNYALLGGLRAVAQTISYEVSLVLLLMSFILLVE 162
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408 163 SFDLLMFSEYQSGFWFIFIGLPLGMCWLSSCLAETNRTPFDFAEGESELVSGFNVEYSGGGFALIFLAEYASILFMSVLF 242
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2452623408 243 SLIFLGGNVMMFMFYVKLMLLSFVFVWVRGTLPRFRYDKLMYLAWSSYLPVSLYFLIFFVGVKLLV 308
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
11-300 3.37e-98

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 291.30  E-value: 3.37e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408  11 VFLIVGVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGLPQPFSDAVKLFTSEQAWPELSNYFLYYFSPVFSLFLSLLVW 90
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408  91 MIFPYFTNLF--SFSLGILFFLCCTGMGVYGVMIAGWSSNSNYALLGGLRAVAQTISYEVSLVLLLMSFILLVESFDLLM 168
Cdd:pfam00146  83 AVIPFGPGLVlaDLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408 169 FSEYQSGFWFIFIGLPLGMCWLSSCLAETNRTPFDFAEGESELVSGFNVEYSGGGFALIFLAEYASILFMSVLFSLIFLG 248
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2452623408 249 G------NVMMFMFYVKLMLLSFVFVWVRGTLPRFRYDKLMYLAWSSYLPVSLYFLIF 300
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-308 1.00e-93

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 280.86  E-value: 1.00e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408   1 MDFIMMVLGGVFLIVGVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGLPQPFSDAVKLFTSEQAWPELSNYFLYYFSPV 80
Cdd:COG1005     6 APLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPI 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408  81 FSLFLSLLVWMIFPYFTN--LFSFSLGILFFLCCTGMGVYGVMIAGWSSNSNYALLGGLRAVAQTISYEVSLVLLLMSFI 158
Cdd:COG1005    86 LAFIPALLAFAVIPFGPGlvLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVV 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408 159 LLVESFDLLMFSEYQSGF-WFIFIGLPLGMCWLSSCLAETNRTPFDFAEGESELVSGFNVEYSGGGFALIFLAEYASILF 237
Cdd:COG1005   166 LLAGSLNLSEIVEAQAGGlWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFL 245

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408 238 MSVLFSLIFLGG------------NVMMFMFYVKLMLLSFVFVWVRGTLPRFRYDKLMYLAWSSYLPVSLYFLIFFVGVK 305
Cdd:COG1005   246 VSALATTLFLGGwlgpfpilplggLPGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLTAAVV 325


                  ...
gi 2452623408 306 LLV 308
Cdd:COG1005   326 LLF 328
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 3-308 1.89e-152

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 429.19  E-value: 1.89e-152
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408   3 FIMMVLGGVFLIVGVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGLPQPFSDAVKLFTSEQAWPELSNYFLYYFSPVFS 82
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408  83 LFLSLLVWMIFPYFTNLFSFSLGILFFLCCTGMGVYGVMIAGWSSNSNYALLGGLRAVAQTISYEVSLVLLLMSFILLVE 162
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408 163 SFDLLMFSEYQSGFWFIFIGLPLGMCWLSSCLAETNRTPFDFAEGESELVSGFNVEYSGGGFALIFLAEYASILFMSVLF 242
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2452623408 243 SLIFLGGNVMMFMFYVKLMLLSFVFVWVRGTLPRFRYDKLMYLAWSSYLPVSLYFLIFFVGVKLLV 308
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 4-306 7.94e-133

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 379.38  E-value: 7.94e-133
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408   4 IMMVLGGVFLIVGVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGLPQPFSDAVKLFTSEQAWPELSNYFLYYFSPVFSL 83
Cdd:MTH00225    1 MSFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408  84 FLSLLVWMIFPYFTNLFSFSLGILFFLCCTGMGVYGVMIAGWSSNSNYALLGGLRAVAQTISYEVSLVLLLMSFILLVES 163
Cdd:MTH00225   81 ILSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLT 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408 164 FDLLMFSEYQSGFWFIFIGLPLGMCWLSSCLAETNRTPFDFAEGESELVSGFNVEYSGGGFALIFLAEYASILFMSVLFS 243
Cdd:MTH00225  161 YNLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTS 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2452623408 244 LIFLGG--NVMMFMFYVKLMLLSFVFVWVRGTLPRFRYDKLMYLAWSSYLPVSLYFLIFFVGVKL 306
Cdd:MTH00225  241 ILFFGGffVTIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 7-304 2.33e-124

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 358.03  E-value: 2.33e-124
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408   7 VLGGVFLIVGVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGLPQPFSDAVKLFTSEQAWPELSNYFLYYFSPVFSLFLS 86
Cdd:MTH00143    4 LLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408  87 LLVWMIFPYFTNLFSFSLGILFFLCCTGMGVYGVMIAGWSSNSNYALLGGLRAVAQTISYEVSLVLLLMSFILLVESFDL 166
Cdd:MTH00143   84 LLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSF 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408 167 LMFSEYQSGFWFIFIGLPLGMCWLSSCLAETNRTPFDFAEGESELVSGFNVEYSGGGFALIFLAEYASILFMSVLFSLIF 246
Cdd:MTH00143  164 IEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLF 243

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2452623408 247 LGGNVMMF-----MFYVKLMLLSFVFVWVRGTLPRFRYDKLMYLAWSSYLPVSLYFLIFFVGV 304
Cdd:MTH00143  244 FGGSSVLFllggvVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVL 306
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 1-302 4.20e-110

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 322.34  E-value: 4.20e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408   1 MDFIMMVLGGVFLIVGVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGLPQPFSDAVKLFTSEQAWPELSNYFLYYFSPV 80
Cdd:MTH00071    2 MTLISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPT 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408  81 FSLFLSLLVWMIFPYFTNLFSFSLGILFFLCCTGMGVYGVMIAGWSSNSNYALLGGLRAVAQTISYEVSLVLLLMSFILL 160
Cdd:MTH00071   82 MALTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILL 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408 161 VESFDLLMFSEYQSGFWFIFIGLPLGMCWLSSCLAETNRTPFDFAEGESELVSGFNVEYSGGGFALIFLAEYASILFMSV 240
Cdd:MTH00071  162 TGGFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNT 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2452623408 241 LFSLIFLGGNVMMFM-------FYVKLMLLSFVFVWVRGTLPRFRYDKLMYLAWSSYLPVSLYFLIFFV 302
Cdd:MTH00071  242 LSTILFLGSTYNHLQpelstmnLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHI 310
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 3-311 8.20e-110

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 321.09  E-value: 8.20e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408   3 FIMMVLGGVFLIVGVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGLPQPFSDAVKLFTSEQAWPELSNYFLYYFSPVFS 82
Cdd:MTH00218    1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408  83 LFLSLLVWMIFPYFTNLFSFSLGILFFLCCTGMGVYGVMIAGWSSNSNYALLGGLRAVAQTISYEVSLVLLLMSFILLVE 162
Cdd:MTH00218   81 LTLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408 163 SFDLLMFSEYQSGFWFIFIGLPLGMCWLSSCLAETNRTPFDFAEGESELVSGFNVEYSGGGFALIFLAEYASILFMSVLF 242
Cdd:MTH00218  161 GFSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLS 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2452623408 243 SLIFLGGNVMMFMFYVKLMLLSFVFVWVRGTLPRFRYDKLMYLAWSSYLPVSLYFLIFFVGVKLLVVIL 311
Cdd:MTH00218  241 VILFLGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASL 309
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 14-295 6.48e-108

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 316.84  E-value: 6.48e-108
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408  14 IVGVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGLPQPFSDAVKLFTSEQAWPELSNYFLYYFSPVFSLFLSLLVWMIF 93
Cdd:MTH00111   15 IIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLALTIWTPL 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408  94 PYFTNLFSFSLGILFFLCCTGMGVYGVMIAGWSSNSNYALLGGLRAVAQTISYEVSLVLLLMSFILLVESFDLLMFSEYQ 173
Cdd:MTH00111   95 PMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTLQTLATTQ 174

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408 174 SGFWFIFIGLPLGMCWLSSCLAETNRTPFDFAEGESELVSGFNVEYSGGGFALIFLAEYASILFMSVLFSLIFLGGNVMM 253
Cdd:MTH00111  175 EPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILFLNPSTLN 254

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 2452623408 254 F---MFYVKLM----LLSFVFVWVRGTLPRFRYDKLMYLAWSSYLPVSL 295
Cdd:MTH00111  255 LppeLFTINLMtktlLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTL 303
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 4-308 1.25e-107

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 315.53  E-value: 1.25e-107
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408   4 IMMVLGGVFLIVGVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGLPQPFSDAVKLFTSEQAWPELSNYFLYYFSPVFSL 83
Cdd:MTH00195    2 MISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLAL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408  84 FLSLLVWMIFPYFTNLFSFSLGILFFLCCTGMGVYGVMIAGWSSNSNYALLGGLRAVAQTISYEVSLVLLLMSFILLVES 163
Cdd:MTH00195   82 ALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408 164 FDLLMFSEYQSGFWFIFIGLPLGMCWLSSCLAETNRTPFDFAEGESELVSGFNVEYSGGGFALIFLAEYASILFMSVLFS 243
Cdd:MTH00195  162 FDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTT 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2452623408 244 LIFLGGNvMMFMFYVKLMLLSFVFVWVRGTLPRFRYDKLMYLAWSSYLPVSLYFLIFFVGVKLLV 308
Cdd:MTH00195  242 ILFLGGG-GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 3-299 1.62e-107

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 315.78  E-value: 1.62e-107
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408   3 FIMMVLGGVFLIVGVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGLPQPFSDAVKLFTSEQAWPELSNYFLYYFSPVFS 82
Cdd:MTH00134    5 LITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLA 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408  83 LFLSLLVWMIFPYFTNLFSFSLGILFFLCCTGMGVYGVMIAGWSSNSNYALLGGLRAVAQTISYEVSLVLLLMSFILLVE 162
Cdd:MTH00134   85 LTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTG 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408 163 SFDLLMFSEYQSGFWFIFIGLPLGMCWLSSCLAETNRTPFDFAEGESELVSGFNVEYSGGGFALIFLAEYASILFMSVLF 242
Cdd:MTH00134  165 GFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLS 244

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2452623408 243 SLIFLGGNVMMFM-------FYVKLMLLSFVFVWVRGTLPRFRYDKLMYLAWSSYLPVSLYFLI 299
Cdd:MTH00134  245 AILFLGASHIPTLpelttinLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVI 308
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 1-311 1.05e-105

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 311.14  E-value: 1.05e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408   1 MDFIMMVLGGVFLIVGVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGLPQPFSDAVKLFTSEQAWPELSNYFLYYFSPV 80
Cdd:MTH00040    1 MSVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408  81 FSLFLSLLVWMIFPYFTNLFSFSLGILFFLCCTGMGVYGVMIAGWSSNSNYALLGGLRAVAQTISYEVSLVLLLMSFILL 160
Cdd:MTH00040   81 LFLFLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408 161 VESFDLLMFSEYQSGFWFIFIGLPLGMCWLSSCLAETNRTPFDFAEGESELVSGFNVEYSGGGFALIFLAEYASILFMSV 240
Cdd:MTH00040  161 SGSFSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNL 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2452623408 241 LFSLIFLGGN--------VMMFMFYVKLMLLSFVFVWVRGTLPRFRYDKLMYLAWSSYLPVSLYFLIFFVGVKLLVVIL 311
Cdd:MTH00040  241 LSVILFLGGGspfneifpINIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNIL 319
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 5-302 1.73e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 310.40  E-value: 1.73e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408   5 MMVLGGVFLIVGVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGLPQPFSDAVKLFTSEQAWPELSNYFLYYFSPVFSLF 84
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408  85 LSLLVWMIFPYFTNLFSFSLGILFFLCCTGMGVYGVMIAGWSSNSNYALLGGLRAVAQTISYEVSLVLLLMSFILLVESF 164
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408 165 DLLMFSEYQSGFWFIFIGLPLGMCWLSSCLAETNRTPFDFAEGESELVSGFNVEYSGGGFALIFLAEYASILFMSVLFSL 244
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2452623408 245 IFLGGNVMMFM-------FYVKLMLLSFVFVWVRGTLPRFRYDKLMYLAWSSYLPVSLYFLIFFV 302
Cdd:MTH00104  241 LFLGAFHNPYMpelyttnFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHI 305
NADHdh pfam00146
NADH dehydrogenase;
11-300 3.37e-98

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 291.30  E-value: 3.37e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408  11 VFLIVGVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGLPQPFSDAVKLFTSEQAWPELSNYFLYYFSPVFSLFLSLLVW 90
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408  91 MIFPYFTNLF--SFSLGILFFLCCTGMGVYGVMIAGWSSNSNYALLGGLRAVAQTISYEVSLVLLLMSFILLVESFDLLM 168
Cdd:pfam00146  83 AVIPFGPGLVlaDLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408 169 FSEYQSGFWFIFIGLPLGMCWLSSCLAETNRTPFDFAEGESELVSGFNVEYSGGGFALIFLAEYASILFMSVLFSLIFLG 248
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2452623408 249 G------NVMMFMFYVKLMLLSFVFVWVRGTLPRFRYDKLMYLAWSSYLPVSLYFLIF 300
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 14-308 5.47e-98

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 291.30  E-value: 5.47e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408  14 IVGVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGLPQPFSDAVKLFTSEQAWPELSNYFLYYFSPVFSLFLSLLVWMIF 93
Cdd:MTH00010   13 YVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLWSLY 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408  94 PYFTNLFSFSLGILFFLCCTGMGVYGVMIAGWSSNSNYALLGGLRAVAQTISYEVSLVLLLMSFILLVESFDLLMFSEYQ 173
Cdd:MTH00010   93 PHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSKIIMSQ 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408 174 SgFWFIFIGLPLGMCWLSSCLAETNRTPFDFAEGESELVSGFNVEYSGGGFALIFLAEYASILFMSVLFSLIFLGGNVMM 253
Cdd:MTH00010  173 Y-SWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFFTSFIPSI 251

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2452623408 254 F----MFYVKLMLLSFVFVWVRGTLPRFRYDKLMYLAWSSYLPVSLYFLIFFVGVKLLV 308
Cdd:MTH00010  252 FisdlMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLL 310
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-308 1.00e-93

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 280.86  E-value: 1.00e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408   1 MDFIMMVLGGVFLIVGVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGLPQPFSDAVKLFTSEQAWPELSNYFLYYFSPV 80
Cdd:COG1005     6 APLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPI 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408  81 FSLFLSLLVWMIFPYFTN--LFSFSLGILFFLCCTGMGVYGVMIAGWSSNSNYALLGGLRAVAQTISYEVSLVLLLMSFI 158
Cdd:COG1005    86 LAFIPALLAFAVIPFGPGlvLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVV 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408 159 LLVESFDLLMFSEYQSGF-WFIFIGLPLGMCWLSSCLAETNRTPFDFAEGESELVSGFNVEYSGGGFALIFLAEYASILF 237
Cdd:COG1005   166 LLAGSLNLSEIVEAQAGGlWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFL 245

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408 238 MSVLFSLIFLGG------------NVMMFMFYVKLMLLSFVFVWVRGTLPRFRYDKLMYLAWSSYLPVSLYFLIFFVGVK 305
Cdd:COG1005   246 VSALATTLFLGGwlgpfpilplggLPGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLTAAVV 325


                  ...
gi 2452623408 306 LLV 308
Cdd:COG1005   326 LLF 328
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 4-304 6.73e-89

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 268.53  E-value: 6.73e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408   4 IMMVLGGVFLIVGVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGLPQPFSDAVKLFTSEQAWPELSNYFLYYFSPVFSL 83
Cdd:MTH00216    6 IFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSF 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408  84 FLSLLVWMIFPYFTN--LFSFSLGILFFLCCTGMGVYGVMIAGWSSNSNYALLGGLRAVAQTISYEVSLVLLLMSFILLV 161
Cdd:MTH00216   86 TLALIVWGVIPYERGvlISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCV 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408 162 ESFDLLMFSEYQS-GFWFIFIGLPLGMCWLSSCLAETNRTPFDFAEGESELVSGFNVEYSGGGFALIFLAEYASILFMSV 240
Cdd:MTH00216  166 GSLSITEIVLAQNnGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSC 245

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2452623408 241 LFSLIFLGG--------NVMMFMFYVKLMLLSFVFVWVRGTLPRFRYDKLMYLAWSSYLPVSLYFLIFFVGV 304
Cdd:MTH00216  246 LTTILFLGGwlspikyfKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASV 317
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 4-304 1.77e-88

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 267.36  E-value: 1.77e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408   4 IMMVLGGVFLIVGVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGLPQPFSDAVKLFTSEQAWPELSNYFLYYFSPVFSL 83
Cdd:MTH00054    2 GIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408  84 FLSLLVWMIFPYFTN--LFSFSLGILFFLCCTGMGVYGVMIAGWSSNSNYALLGGLRAVAQTISYEVSLVLLLMSFILLV 161
Cdd:MTH00054   82 TLAFIAWGVIPYGEGvvLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCV 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408 162 ESFDLLMFSEYQSGFWFIFIGLPLGMCWLSSCLAETNRTPFDFAEGESELVSGFNVEYSGGGFALIFLAEYASILFMSVL 241
Cdd:MTH00054  162 GSLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTF 241

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2452623408 242 FSLIFLGGNVMMF----------MFYVKLMLLSFVFVWVRGTLPRFRYDKLMYLAWSSYLPVSLYFLIFFVGV 304
Cdd:MTH00054  242 GVILFLGGWLVISgptsyfsnfvWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGI 314
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
3-304 5.39e-86

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 260.89  E-value: 5.39e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408   3 FIMMVLGGVFLIVGVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGLPQPFSDAVKLFTSEQAWPELSNYFLYYFSPVFS 82
Cdd:PRK06076    9 LLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIA 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408  83 LFLSLLVWMIFPYFTN--LFSFSLGILFFLCCTGMGVYGVMIAGWSSNSNYALLGGLRAVAQTISYEVSLVLLLMSFILL 160
Cdd:PRK06076   89 FIPAFLAWAVIPFGPElvIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLL 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408 161 VESFDLLMFSEYQSGFWFIFIGLPLGMCWLSSCLAETNRTPFDFAEGESELVSGFNVEYSGGGFALIFLAEYASILFMSV 240
Cdd:PRK06076  169 AGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSA 248

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2452623408 241 LFSLIFLGG----------NVMMFMFYVKLMLLSFVFVWVRGTLPRFRYDKLMYLAWSSYLPVSLYFLIFFVGV 304
Cdd:PRK06076  249 LITTLFLGGwlppfplgggIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLLTAAV 322
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 3-304 2.97e-69

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 218.73  E-value: 2.97e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408   3 FIMMVLGGVFLIVGVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGLPQPFSDAVKLFTSEQAWPELSNYFLYYFSPVFS 82
Cdd:MTH00029    6 YITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIIS 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408  83 LFLSLLVWMIFPYFTNLF--SFSLGILFFLCCTGMGVYGVMIAGWSSNSNYALLGGLRAVAQTISYEVSLVLLLMSFILL 160
Cdd:MTH00029   86 FTLAILAWAIVTMDQGVFlsDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILC 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408 161 VESFDLLMFSEYQSGFWFIFIGLPLGMCWLSSCLAETNRTPFDFAEGESELVSGFNVEYSGGGFALIFLAEYASILFMSV 240
Cdd:MTH00029  166 VGSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSC 245

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408 241 LFSLIFLGGNV-----------------------MMFMFYVKLMLLSFVFVWVRGTLPRFRYDKLMYLAWSSYLPVSLYF 297
Cdd:MTH00029  246 MMTIFFLGGWLspldgiptppeafsifeqiasskSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGL 325


                  ....*..
gi 2452623408 298 LIFFVGV 304
Cdd:MTH00029  326 VILTAGI 332
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 13-306 6.62e-64

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 203.21  E-value: 6.62e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408  13 LIVGVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGLPQPFSDAVKLFTSEQAWPELSNYFLYYFSPVFSLFLSLLVWMI 92
Cdd:MTH00090    5 MMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFV 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408  93 FPYFTNLFSFSLGILFFLCCTGMGVYGVMIAGWSSNSNYALLGGLRAVAQTISYEVSLVLLLMSFILLVESFdllMFSEY 172
Cdd:MTH00090   85 LPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSF---SFVSS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408 173 QSGFWFIFIglplgMCWLSSCLAETNRTPFDFAEGESELVSGFNVEYSGGGFALIFLAEYASILFMSVLFSLIFLggNVM 252
Cdd:MTH00090  162 FSLSLFVIY-----LPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFF--KFS 234

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 2452623408 253 MFMFYVKLMLLSFvfvwVRGTLPRFRYDKLMYLAWSSYLPVSLYFLIFFVGVKL 306
Cdd:MTH00090  235 FLMLFLIFSLLIF----IRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 4-302 1.51e-48

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 163.94  E-value: 1.51e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408   4 IMMVLGGVFLIVGVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGLPQPFSDAVKLFTSeqawpelSNYFLYYFSPVFSL 83
Cdd:MTH00058    1 IFGLVSGLEGLLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVK-------FKVYGFQSRSWFSL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408  84 FLSLLVWMIFPYFTNLFSF-------SLGILFFLCCTGMGVYGVMIAGWSSNSNYALLGGLRAVAQTISYEVSLVLLLMS 156
Cdd:MTH00058   74 FGVFLLVLLVVFYCFIYGSyysgsysSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIF 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408 157 FILLVESFDLLMFseYQSGFWFIFIGLPLGMCWLSSCLAETNRTPFDFAEGESELVSGFNVEYSGGGFALIFLAEYASIL 236
Cdd:MTH00058  154 CGLCYGSYSLVDF--YYSGWLSVLLFPLIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIF 231

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2452623408 237 FMSVLFSLIFLGGNVMMFMFYVKLMLlsfvFVWVRGTLPRFRYDKLMYLAWSSYLPVSLYFLIFFV 302
Cdd:MTH00058  232 IFSWLGSVLFFGGGFVSIMLLFHLLF----FMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVIV 293
ndhA CHL00032
NADH dehydrogenase subunit 1
 3-295 7.16e-42

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 148.18  E-value: 7.16e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408   3 FIMMVLGGVFLIVGVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGLPQPFSDAVKLFTSEQAWPELSNYFLYYFSP--- 79
Cdd:CHL00032   26 LIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPsia 105

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408  80 VFSLFLSLLVwMIFPYFTNLFSFSLGILFFLCCTGMGVYGVMIAGWSSNSNYALLGGLRAVAQTISYEVSLVLLLMSFIL 159
Cdd:CHL00032  106 VISILLSYLV-IPFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 184

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408 160 LVESFDLLMFSEYQSGFWFIFIGL---PLG-MCWLSSCLAETNRTPFDFAEGESELVSGFNVEYSGGGFALIFLAEY--- 232
Cdd:CHL00032  185 LSNSLSTVDIVEAQSKYGFWGWNLwrqPIGfIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYlnl 264

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408 233 -ASILFMSVL------FSLIF---------------LGGNVMMFMFYVKLMLLSFVFVWVRGTLPRFRYDKLMYLAWSSY 290
Cdd:CHL00032  265 lVSSLFVTVLylggwnLSIPYifipelfeinktggvFGTTIGIFITLAKTYLFLFISITTRWTLPRLRMDQLLNLGWKFL 344


                  ....*
gi 2452623408 291 LPVSL 295
Cdd:CHL00032  345 LPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
4-302 1.69e-27

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 108.73  E-value: 1.69e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408   4 IMMVLGGVFLIVGVLVGVAFLTLLERKVLGYIQIRKGPnkvgfvGLPQPFSDAVKLFTSEQAWPELSNyFLYYFSPVFSL 83
Cdd:COG0650     1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETAS-WLFRAAPYVAL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408  84 FLSLLVWMIFPYFTN--LFSFSLGILFFLCCTGMGVYGVMIAGWSSNSNYALLGGLRAVAQTISYEVSLVLLLMSFILLV 161
Cdd:COG0650    74 AAMLLAALLVPVLTTgpPLSFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLA 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408 162 ESFDLLMFSEYQS---GFWFIFIGLPLGMCWLSSCLAETNRTPFDFAEGESELVSGFNVEYSGGGFALIFLAEYASILFM 238
Cdd:COG0650   154 GSTSLSDIVAYQAahgPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVL 233

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452623408 239 SVLFSLIFLGGNVMMFM------FYVKLMLLSFVFVWVRGTLPRFRYDKLMYLAWSSYLpVSLYFLIFFV 302
Cdd:COG0650   234 LSLFVNLFLPWGIALTLllalllFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFL-LALLALLLAV 302
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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