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Conserved domains on  [gi|2452628040|ref|YP_010698175|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Paragavialidium hainanense]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-310 4.55e-130

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 372.56  E-value: 4.55e-130
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040   6 YYMFILNFVLISLMVLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGIVQPFSDAIKLFSKEHFFPYRSNYILYYFSPIFG 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040  86 LFLSLFVWLLFPYVTFFCSFSLGLVFLLCVMSLSVYVLMLSGWSSNSNYSLLGSIRAVSQTISYEVSLSVIMLSLFFLLG 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040 166 SYDFICFVSYQ-YIWFMFLCWPLFFCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGSTFALIFLSEYVMIVFMGFLV 244
Cdd:MTH00193  161 SFNLLDFMNYQkYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2452628040 245 VLFFMGGNYNSLSFFFKLVLVSFSFLWVRGTLPRYRYDSLMYLAWSGFLPVSLNYLIFMGGLKLLC 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-310 4.55e-130

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 372.56  E-value: 4.55e-130
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040   6 YYMFILNFVLISLMVLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGIVQPFSDAIKLFSKEHFFPYRSNYILYYFSPIFG 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040  86 LFLSLFVWLLFPYVTFFCSFSLGLVFLLCVMSLSVYVLMLSGWSSNSNYSLLGSIRAVSQTISYEVSLSVIMLSLFFLLG 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040 166 SYDFICFVSYQ-YIWFMFLCWPLFFCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGSTFALIFLSEYVMIVFMGFLV 244
Cdd:MTH00193  161 SFNLLDFMNYQkYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2452628040 245 VLFFMGGNYNSLSFFFKLVLVSFSFLWVRGTLPRYRYDSLMYLAWSGFLPVSLNYLIFMGGLKLLC 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
14-304 8.06e-93

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 277.82  E-value: 8.06e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040  14 VLISLMVLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGIVQPFSDAIKLFSKEHFFPYRSNYILYYFSPIFGLFLSLFVW 93
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040  94 LLFPY--VTFFCSFSLGLVFLLCVMSLSVYVLMLSGWSSNSNYSLLGSIRAVSQTISYEVSLSVIMLSLFFLLGSYDFIC 171
Cdd:pfam00146  83 AVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040 172 FVSYQ-YIWFMFLCWPLFFCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGSTFALIFLSEYVMIVFMGFLVVLFFMG 250
Cdd:pfam00146 163 IVEAQaGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040 251 G------NYNSLSFFFKLVLVSFSFLWVRGTLPRYRYDSLMYLAWSGFLPVSLNYLIFMG 304
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 8-309 2.15e-90

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 272.39  E-value: 2.15e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040   8 MFILNFVLISLMVLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGIVQPFSDAIKLFSKEHFFPYRSNYILYYFSPIFGLF 87
Cdd:COG1005    10 ITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFI 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040  88 LSLFVWLLFPY--VTFFCSFSLGLVFLLCVMSLSVYVLMLSGWSSNSNYSLLGSIRAVSQTISYEVSLSVIMLSLFFLLG 165
Cdd:COG1005    90 PALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAG 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040 166 SYDFICFVSYQ--YIWFMFLCWPLFFCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGSTFALIFLSEYVMIVFMGFL 243
Cdd:COG1005   170 SLNLSEIVEAQagGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSAL 249

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2452628040 244 VVLFFMGGnYNS-------------LSFFFKLVLVSFSFLWVRGTLPRYRYDSLMYLAWSGFLPVSLNYLIFMGGLKLL 309
Cdd:COG1005   250 ATTLFLGG-WLGpfpilplgglpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLTAAVVLL 327
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
20-308 4.29e-48

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 164.11  E-value: 4.29e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040  20 VLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGIVQPFSDAIKLFSKEHFFPYRSNYILYYFSPIFGLFLSLFVWLLFP-- 97
Cdd:NF040610   23 VFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLMLVAIPfg 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040  98 --------YVTFFCSFSLGLVFLLCVMSLSVYVLMLSGWSSNSNYSLLGSIRAVSQTISYEVSLSVIMLSLFFLLGSYDF 169
Cdd:NF040610  103 aviingveYPLVVTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIMAGSLNI 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040 170 ICFVSYQ-YIWFMFLCWPLFFCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGSTFALIFLSEYVMIVFMGFLVVLFF 248
Cdd:NF040610  183 VEIVEAQsPIWFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGSFLVVLLF 262

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2452628040 249 MGGnYN----------------SLSFFFKLVLVSFSFLWVRGTLPRYRYDSLMYLAWSGFLPVSLNYLIFMGGLKL 308
Cdd:NF040610  263 LGG-WNlpgfvtdipvlgiilpTLFFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSLLNLGWAIALGL 337
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-310 4.55e-130

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 372.56  E-value: 4.55e-130
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040   6 YYMFILNFVLISLMVLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGIVQPFSDAIKLFSKEHFFPYRSNYILYYFSPIFG 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040  86 LFLSLFVWLLFPYVTFFCSFSLGLVFLLCVMSLSVYVLMLSGWSSNSNYSLLGSIRAVSQTISYEVSLSVIMLSLFFLLG 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040 166 SYDFICFVSYQ-YIWFMFLCWPLFFCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGSTFALIFLSEYVMIVFMGFLV 244
Cdd:MTH00193  161 SFNLLDFMNYQkYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2452628040 245 VLFFMGGNYNSLSFFFKLVLVSFSFLWVRGTLPRYRYDSLMYLAWSGFLPVSLNYLIFMGGLKLLC 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 8-308 1.55e-115

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 335.47  E-value: 1.55e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040   8 MFILNFVLISLMVLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGIVQPFSDAIKLFSKEHFFPYRSNYILYYFSPIFGLF 87
Cdd:MTH00225    2 SFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040  88 LSLFVWLLFPYVTFFCSFSLGLVFLLCVMSLSVYVLMLSGWSSNSNYSLLGSIRAVSQTISYEVSLSVIMLSLFFLLGSY 167
Cdd:MTH00225   82 LSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTY 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040 168 DFICFVSYQ-YIWFMFLCWPLFFCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGSTFALIFLSEYVMIVFMGFLVVL 246
Cdd:MTH00225  162 NLFDFSYNQkYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSI 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2452628040 247 FFMGGNYNSLSFFF--KLVLVSFSFLWVRGTLPRYRYDSLMYLAWSGFLPVSLNYLIFMGGLKL 308
Cdd:MTH00225  242 LFFGGFFVTIDLFLilKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 7-306 4.65e-111

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 324.13  E-value: 4.65e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040   7 YMFILNFVLISLMVLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGIVQPFSDAIKLFSKEHFFPYRSNYILYYFSPIFGL 86
Cdd:MTH00143    1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040  87 FLSLFVWLLFPYVTFFCSFSLGLVFLLCVMSLSVYVLMLSGWSSNSNYSLLGSIRAVSQTISYEVSLSVIMLSLFFLLGS 166
Cdd:MTH00143   81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040 167 YDFICFVSYQ-YIWFMFLCWPLFFCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGSTFALIFLSEYVMIVFMGFLVV 245
Cdd:MTH00143  161 FSFIEISESQfSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2452628040 246 LFFMGGN-----YNSLSFFFKLVLVSFSFLWVRGTLPRYRYDSLMYLAWSGFLPVSLNYLIFMGGL 306
Cdd:MTH00143  241 VLFFGGSsvlflLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVL 306
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 10-310 4.45e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 309.15  E-value: 4.45e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040  10 ILNFVLISLMVLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGIVQPFSDAIKLFSKEHFFPYRSNYILYYFSPIFGLFLS 89
Cdd:MTH00218    5 LINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLA 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040  90 LFVWLLFPYVTFFCSFSLGLVFLLCVMSLSVYVLMLSGWSSNSNYSLLGSIRAVSQTISYEVSLSVIMLSLFFLLGSYDF 169
Cdd:MTH00218   85 LLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSL 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040 170 ICFVSYQY-IWFMFLCWPLFFCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGSTFALIFLSEYVMIVFMGFLVVLFF 248
Cdd:MTH00218  165 EGFNLTQEtIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILF 244

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2452628040 249 MGGNYNSLSFFFKLVLVSFSFLWVRGTLPRYRYDSLMYLAWSGFLPVSLNYLIFMGGLKLLC 310
Cdd:MTH00218  245 LGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSF 306
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 8-309 3.11e-101

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 299.35  E-value: 3.11e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040   8 MFILNFVLISLMVLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGIVQPFSDAIKLFSKEHFFPYRSNYILYYFSPIFGLF 87
Cdd:MTH00195    3 ISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALA 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040  88 LSLFVWLLFPYVTFFCSFSLGLVFLLCVMSLSVYVLMLSGWSSNSNYSLLGSIRAVSQTISYEVSLSVIMLSLFFLLGSY 167
Cdd:MTH00195   83 LALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSF 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040 168 DFICFVSYQ-YIWFMFLCWPLFFCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGSTFALIFLSEYVMIVFMGFLVVL 246
Cdd:MTH00195  163 DFTIMVISQgFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTI 242

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2452628040 247 FFMGGNYNSLsFFFKLVLVSFSFLWVRGTLPRYRYDSLMYLAWSGFLPVSLNYLIFMGGLKLL 309
Cdd:MTH00195  243 LFLGGGGTII-VALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFA 304
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 10-297 3.46e-101

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 299.89  E-value: 3.46e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040  10 ILNFVLISLMVLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGIVQPFSDAIKLFSKEHFFPYRSNYILYYFSPIFGLFLS 89
Cdd:MTH00111    8 LINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLA 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040  90 LFVWLLFPYVTFFCSFSLGLVFLLCVMSLSVYVLMLSGWSSNSNYSLLGSIRAVSQTISYEVSLSVIMLSLFFLLGSYDF 169
Cdd:MTH00111   88 LTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTL 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040 170 ICFVSYQ-YIWFMFLCWPLFFCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGSTFALIFLSEYVMIVFMGFL-VVLF 247
Cdd:MTH00111  168 QTLATTQePLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLtTILF 247

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2452628040 248 FMGGNYNSLSFFF------KLVLVSFSFLWVRGTLPRYRYDSLMYLAWSGFLPVSL 297
Cdd:MTH00111  248 LNPSTLNLPPELFtinlmtKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTL 303
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 7-302 1.63e-100

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 298.07  E-value: 1.63e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040   7 YMFILNFVLISLMVLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGIVQPFSDAIKLFSKEHFFPYRSNYILYYFSPIFGL 86
Cdd:MTH00071    5 ISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMAL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040  87 FLSLFVWLLFPYVTFFCSFSLGLVFLLCVMSLSVYVLMLSGWSSNSNYSLLGSIRAVSQTISYEVSLSVIMLSLFFLLGS 166
Cdd:MTH00071   85 TLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGG 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040 167 YDFICF-VSYQYIWFMFLCWPLFFCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGSTFALIFLSEYVMIVFMGFLVV 245
Cdd:MTH00071  165 FSLMNFnTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLST 244

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2452628040 246 LFFMGGNYN-------SLSFFFKLVLVSFSFLWVRGTLPRYRYDSLMYLAWSGFLPVSLNYLIF 302
Cdd:MTH00071  245 ILFLGSTYNhlqpelsTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIF 308
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 5-302 2.38e-100

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 297.66  E-value: 2.38e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040   5 DYYMFILNFVLISLMVLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGIVQPFSDAIKLFSKEHFFPYRSNYILYYFSPIF 84
Cdd:MTH00040    2 SVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040  85 GLFLSLFVWLLFPYVTFFCSFSLGLVFLLCVMSLSVYVLMLSGWSSNSNYSLLGSIRAVSQTISYEVSLSVIMLSLFFLL 164
Cdd:MTH00040   82 FLFLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040 165 GSYDFICFVSYQ-YIWFMFLCWPLFFCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGSTFALIFLSEYVMIVFMGFL 243
Cdd:MTH00040  162 GSFSLSSISNSQnGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLL 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2452628040 244 VVLFFMGGN--------YNSLSFFFKLVLVSFSFLWVRGTLPRYRYDSLMYLAWSGFLPVSLNYLIF 302
Cdd:MTH00040  242 SVILFLGGGspfneifpINIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIF 308
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 8-297 2.62e-100

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 297.31  E-value: 2.62e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040   8 MFILNFVLISLMVLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGIVQPFSDAIKLFSKEHFFPYRSNYILYYFSPIFGLF 87
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040  88 LSLFVWLLFPYVTFFCSFSLGLVFLLCVMSLSVYVLMLSGWSSNSNYSLLGSIRAVSQTISYEVSLSVIMLSLFFLLGSY 167
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040 168 DFICFVSYQ-YIWFMFLCWPLFFCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGSTFALIFLSEYVMIVFMGFLVVL 246
Cdd:MTH00104  161 TLSTLITTQeHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2452628040 247 FFMGGNYN-------SLSFFFKLVLVSFSFLWVRGTLPRYRYDSLMYLAWSGFLPVSL 297
Cdd:MTH00104  241 LFLGAFHNpympelyTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTL 298
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 8-301 1.30e-97

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 290.74  E-value: 1.30e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040   8 MFILNFVLISLMVLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGIVQPFSDAIKLFSKEHFFPYRSNYILYYFSPIFGLF 87
Cdd:MTH00134    7 THIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALT 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040  88 LSLFVWLLFPYVTFFCSFSLGLVFLLCVMSLSVYVLMLSGWSSNSNYSLLGSIRAVSQTISYEVSLSVIMLSLFFLLGSY 167
Cdd:MTH00134   87 LALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGF 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040 168 DFICF-VSYQYIWFMFLCWPLFFCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGSTFALIFLSEYVMIVFMGFLVVL 246
Cdd:MTH00134  167 TLQTFnTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAI 246

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2452628040 247 FFMGGNYN-------SLSFFFKLVLVSFSFLWVRGTLPRYRYDSLMYLAWSGFLPVSLNYLI 301
Cdd:MTH00134  247 LFLGASHIptlpeltTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVI 308
NADHdh pfam00146
NADH dehydrogenase;
14-304 8.06e-93

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 277.82  E-value: 8.06e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040  14 VLISLMVLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGIVQPFSDAIKLFSKEHFFPYRSNYILYYFSPIFGLFLSLFVW 93
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040  94 LLFPY--VTFFCSFSLGLVFLLCVMSLSVYVLMLSGWSSNSNYSLLGSIRAVSQTISYEVSLSVIMLSLFFLLGSYDFIC 171
Cdd:pfam00146  83 AVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040 172 FVSYQ-YIWFMFLCWPLFFCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGSTFALIFLSEYVMIVFMGFLVVLFFMG 250
Cdd:pfam00146 163 IVEAQaGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040 251 G------NYNSLSFFFKLVLVSFSFLWVRGTLPRYRYDSLMYLAWSGFLPVSLNYLIFMG 304
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 8-309 2.15e-90

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 272.39  E-value: 2.15e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040   8 MFILNFVLISLMVLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGIVQPFSDAIKLFSKEHFFPYRSNYILYYFSPIFGLF 87
Cdd:COG1005    10 ITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFI 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040  88 LSLFVWLLFPY--VTFFCSFSLGLVFLLCVMSLSVYVLMLSGWSSNSNYSLLGSIRAVSQTISYEVSLSVIMLSLFFLLG 165
Cdd:COG1005    90 PALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAG 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040 166 SYDFICFVSYQ--YIWFMFLCWPLFFCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGSTFALIFLSEYVMIVFMGFL 243
Cdd:COG1005   170 SLNLSEIVEAQagGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSAL 249

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2452628040 244 VVLFFMGGnYNS-------------LSFFFKLVLVSFSFLWVRGTLPRYRYDSLMYLAWSGFLPVSLNYLIFMGGLKLL 309
Cdd:COG1005   250 ATTLFLGG-WLGpfpilplgglpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLTAAVVLL 327
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 9-311 8.72e-89

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 267.80  E-value: 8.72e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040   9 FILNFVLISLMVLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGIVQPFSDAIKLFSKEHFFPYRSNYILYYFSPIFGLFL 88
Cdd:MTH00010    5 FFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLIL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040  89 SLFVWLLFPYVTFFCSFSLGLVFLLCVMSLSVYVLMLSGWSSNSNYSLLGSIRAVSQTISYEVSLSVIMLSLFFLLGSYD 168
Cdd:MTH00010   85 ALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFS 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040 169 FICFVSYQYIWFMFLCWPLFFCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGSTFALIFLSEYVMIVFMGFLVVLFF 248
Cdd:MTH00010  165 FSKIIMSQYSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFF 244

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2452628040 249 MG----GNYNSLSFFFKLVLVSFSFLWVRGTLPRYRYDSLMYLAWSGFLPVSLNYLIFMGGLKLLCL 311
Cdd:MTH00010  245 TSfipsIFISDLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLLL 311
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-306 2.46e-84

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 256.97  E-value: 2.46e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040   1 MYFIDYYmfILNFVLISLMVLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGIVQPFSDAIKLFSKEHFFPYRSNYILYYF 80
Cdd:MTH00216    2 MVFIIFY--LIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIV 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040  81 SPIFGLFLSLFVWLLFPYV--TFFCSFSLGLVFLLCVMSLSVYVLMLSGWSSNSNYSLLGSIRAVSQTISYEVSLSVIML 158
Cdd:MTH00216   80 APVLSFTLALIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIII 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040 159 SLFFLLGSYDFICFVSYQ--YIWFMFLCWPLFFCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGSTFALIFLSEYVM 236
Cdd:MTH00216  160 SVLLCVGSLSITEIVLAQnnGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAH 239

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2452628040 237 IVFMGFLVVLFFMGG--------NYNSLSFFFKLVLVSFSFLWVRGTLPRYRYDSLMYLAWSGFLPVSLNYLIFMGGL 306
Cdd:MTH00216  240 IILMSCLTTILFLGGwlspikyfKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASV 317
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 7-306 2.13e-83

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 254.65  E-value: 2.13e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040   7 YMFILNFVLISLMVLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGIVQPFSDAIKLFSKEHFFPYRSNYILYYFSPIFGL 86
Cdd:MTH00054    2 GIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040  87 FLSLFVWLLFPYVT--FFCSFSLGLVFLLCVMSLSVYVLMLSGWSSNSNYSLLGSIRAVSQTISYEVSLSVIMLSLFFLL 164
Cdd:MTH00054   82 TLAFIAWGVIPYGEgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCV 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040 165 GSYDFICFVSYQ-YIWFMFLCWPLFFCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGSTFALIFLSEYVMIVFMGFL 243
Cdd:MTH00054  162 GSLNLTEIVLAQkNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTF 241

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2452628040 244 VVLFFMGG----------NYNSLSFFFKLVLVSFSFLWVRGTLPRYRYDSLMYLAWSGFLPVSLNYLIFMGGL 306
Cdd:MTH00054  242 GVILFLGGwlvisgptsyFSNFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGI 314
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
8-306 5.68e-79

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 243.18  E-value: 5.68e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040   8 MFILNFVLISLMVLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGIVQPFSDAIKLFSKEHFFPYRSNYILYYFSPIFGLF 87
Cdd:PRK06076   11 LILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFI 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040  88 LSLFVWLLFPYVTFF--CSFSLGLVFLLCVMSLSVYVLMLSGWSSNSNYSLLGSIRAVSQTISYEVSLSVIMLSLFFLLG 165
Cdd:PRK06076   91 PAFLAWAVIPFGPELviADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAG 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040 166 SYDFICFVSYQ-YIWFMFLCWPLFFCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGSTFALIFLSEYVMIVFMGFLV 244
Cdd:PRK06076  171 SLNLSDIVEAQfLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALI 250

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2452628040 245 VLFFMGGNY----------NSLSFFFKLVLVSFSFLWVRGTLPRYRYDSLMYLAWSGFLPVSLNYLIFMGGL 306
Cdd:PRK06076  251 TTLFLGGWLppfplgggipGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLLTAAV 322
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 1-306 4.00e-68

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 216.04  E-value: 4.00e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040   1 MYFIDYYMFILNFVLISLMVLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGIVQPFSDAIKLFSKEHFFPYRSNYILYYF 80
Cdd:MTH00029    1 MTIYSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040  81 SPIFGLFLSLFVWLL--FPYVTFFCSFSLGLVFLLCVMSLSVYVLMLSGWSSNSNYSLLGSIRAVSQTISYEVSLSVIML 158
Cdd:MTH00029   81 APIISFTLAILAWAIvtMDQGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIII 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040 159 SLFFLLGSYDFICFV-SYQYIWFMFLCWPLFFCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGSTFALIFLSEYVMI 237
Cdd:MTH00029  161 SVILCVGSLNISEIViSQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNI 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040 238 VFMGFLVVLFFMGG-----------------------NYNSLSFFFKLVLVSFSFLWVRGTLPRYRYDSLMYLAWSGFLP 294
Cdd:MTH00029  241 ILMSCMMTIFFLGGwlspldgiptppeafsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLP 320

                         330
                  ....*....|..
gi 2452628040 295 VSLNYLIFMGGL 306
Cdd:MTH00029  321 LSLGLVILTAGI 332
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 12-303 4.48e-58

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 188.18  E-value: 4.48e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040  12 NFVLISLMVLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGIVQPFSDAIKLFSKEHFFPYRSNYILYYFSPIFGLFLSLF 91
Cdd:MTH00090    1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040  92 VWLLFPYVTFFCSFSLGLVFLLCVMSLSVYVLMLSGWSSNSNYSLLGSIRAVSQTISYEVSLSVIMLSLFFLLGSYdfiC 171
Cdd:MTH00090   81 EWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSF---S 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040 172 FVSYQYIWFMFlcwpLFFCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGSTFALIFLSEYVMIVFMGFLVVLFFMGg 251
Cdd:MTH00090  158 FVSSFSLSLFV----IYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK- 232

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2452628040 252 nynsLSFFFKLVLVSFsFLWVRGTLPRYRYDSLMYLAWSGFLPVSLNYLIFM 303
Cdd:MTH00090  233 ----FSFLMLFLIFSL-LIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFF 279
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 18-302 2.33e-48

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 163.56  E-value: 2.33e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040  18 LMVLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGIVQPFSDAIKLFSKEHFFPYRSNYILYYFSPIFGLFLSLFVWLLFP 97
Cdd:MTH00058   12 LIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVVFYCFIYG 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040  98 YVTFFCSFSLGLVFLLCVMSLSVYVLMLSGWSSNSNYSLLGSIRAVSQTISYEVSLSVIMLSLFFLLGSYDFICFvSYQY 177
Cdd:MTH00058   92 SYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDF-YYSG 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040 178 IWFMFLCWPLFFCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGSTFALIFLSEYVMIVFMGFLVVLFFMGGNYNSLS 257
Cdd:MTH00058  171 WLSVLLFPLIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFGGGFVSIM 250

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 2452628040 258 FFFKLVLvsfsFLWVRGTLPRYRYDSLMYLAWSGFLPVSLNYLIF 302
Cdd:MTH00058  251 LLFHLLF----FMWARATLPRVRYDYFVNFFWEYCLVLLILSLFV 291
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
20-308 4.29e-48

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 164.11  E-value: 4.29e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040  20 VLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGIVQPFSDAIKLFSKEHFFPYRSNYILYYFSPIFGLFLSLFVWLLFP-- 97
Cdd:NF040610   23 VFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLMLVAIPfg 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040  98 --------YVTFFCSFSLGLVFLLCVMSLSVYVLMLSGWSSNSNYSLLGSIRAVSQTISYEVSLSVIMLSLFFLLGSYDF 169
Cdd:NF040610  103 aviingveYPLVVTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIMAGSLNI 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040 170 ICFVSYQ-YIWFMFLCWPLFFCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGSTFALIFLSEYVMIVFMGFLVVLFF 248
Cdd:NF040610  183 VEIVEAQsPIWFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGSFLVVLLF 262

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2452628040 249 MGGnYN----------------SLSFFFKLVLVSFSFLWVRGTLPRYRYDSLMYLAWSGFLPVSLNYLIFMGGLKL 308
Cdd:NF040610  263 LGG-WNlpgfvtdipvlgiilpTLFFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSLLNLGWAIALGL 337
ndhA CHL00032
NADH dehydrogenase subunit 1
 5-311 1.79e-36

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 133.92  E-value: 1.79e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040   5 DYYMFILNFVLISLMVL---LSVAFLTLLERSVLGYIQIRKGPNKVGYWGIVQPFSDAIKLFSKEHFFPYRSNYILYYFS 81
Cdd:CHL00032   22 EVYGLIWILVPILTLVLgitIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIG 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040  82 P---IFGLFLSLFVwLLFPYVTFFCSFSLGLVFLLCVMSLSVYVLMLSGWSSNSNYSLLGSIRAVSQTISYEVSLSVIML 158
Cdd:CHL00032  102 PsiaVISILLSYLV-IPFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040 159 SLFFLLGSYDFICFVSYQYIWfMFLCWPL------FFCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGSTFALIFLS 232
Cdd:CHL00032  181 SISLLSNSLSTVDIVEAQSKY-GFWGWNLwrqpigFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVA 259

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040 233 EYVMIVFMGFLVVLFFMGGNYNSLSFFFKLVLV---------------------SFSFLWV----RGTLPRYRYDSLMYL 287
Cdd:CHL00032  260 SYLNLLVSSLFVTVLYLGGWNLSIPYIFIPELFeinktggvfgttigifitlakTYLFLFIsittRWTLPRLRMDQLLNL 339

                         330       340
                  ....*....|....*....|....
gi 2452628040 288 AWSGFLPVSLNYLIFMGGLKLLCL 311
Cdd:CHL00032  340 GWKFLLPISLGNLLLTTSFQLLSL 363
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
8-293 4.65e-29

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 112.97  E-value: 4.65e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040   8 MFILNFVLISLMVLLSVAFLTLLERSVLGYIQIRKGPnkvgywGIVQPFSDAIKLFSKEHFFPYRSNYIlYYFSPIFGLF 87
Cdd:COG0650     2 MLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASWL-FRAAPYVALA 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040  88 LSLFVWLLFPYVTFFCSFSLG--LVFLLCVMSLSVYVLMLSGWSSNSNYSLLGSIRAVSQTISYEVSLSVIMLSLFFLLG 165
Cdd:COG0650    75 AMLLAALLVPVLTTGPPLSFSgdLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAG 154

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2452628040 166 SYDFICFVSYQYIW----FMFLCWPLFFCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGSTFALIFLSEYV-MIVFM 240
Cdd:COG0650   155 STSLSDIVAYQAAHgpllLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALkLFVLL 234

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2452628040 241 GFLVVLFFMGG-----NYNSLSFFFKLVLVSFSFLWVRGTLPRYRYDSLMYLAWSGFL 293
Cdd:COG0650   235 SLFVNLFLPWGialtlLLALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFL 292
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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