|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
14-366 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 618.34 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 14 MVNKALIDLPTPLNISMWWNLGSMLGLCLLIQIMSGLLLSMHYTSNIEMAYESIIHICRDVNKGWLMRTMHANGASMFFF 93
Cdd:MTH00156 3 IINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFFI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 94 CIYLHVGRGLYYGSYLYMYTWSTGVMIMLITMATAFMGYVLPWGQMSFWGATVITNMLSAIPYMGKELVQWLWGGFAVDN 173
Cdd:MTH00156 83 CIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVDN 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 174 ATLNRFFTMHFMLPFIIMAMVMMHLMFLHQTGSNNPIGMKSNTEKIPFHPYFSTKDSITFMLMVIMLMMTSIMYPYSMGD 253
Cdd:MTH00156 163 ATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLGD 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 254 PDNFIPANPLLTPIHIQPEWYFLFAYAILRSIPNKLGGVLALMMSIMIMMIMPFYNKMKFKGNEFYPMNQIMFWSMAMVV 333
Cdd:MTH00156 243 PENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVNIV 322
|
330 340 350
....*....|....*....|....*....|...
gi 2473932263 334 IMLTWIGKRPVEEPFIMNGQVLTTMYFSYFLIN 366
Cdd:MTH00156 323 ILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
17-365 |
8.66e-112 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 331.75 E-value: 8.66e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 17 KALIDLPTPLNISMWWNLGSMLGLCLLIQIMSGLLLSMHYTSNIEMAYESIIHICRDVNKGWLMRTMHANGASMFFFCIY 96
Cdd:COG1290 25 REHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVY 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 97 LHVGRGLYYGSY-----LymyTWSTGVMIMLITMATAFMGYVLPWGQMSFWGATVITNMLSAIPYMGKELVQWLWGGFAV 171
Cdd:COG1290 105 LHMFRGFFYGAYkkpreL---NWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFP 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 172 DNATLNRFFTMHFM-LPFIIMAMVMMHLMFLHQTGSNNPIGMKSNTEK----IPFHPYFSTKDSITFMLMVIMLMMTSIM 246
Cdd:COG1290 182 GDATLNRFFALHVLlLPALLLALVVLHLWLLHRHGHNNPPGPERKKTEkvdgVPFHPYYTVKDGFGFFVFLGVFALLAFF 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 247 YPysMGDPDNFIPANPLLTPIHIQPEWYFLFAYAILRSIP--NKLGGVLALMMSIMIMMIMPFYNKMKFKGNEFYPMNQI 324
Cdd:COG1290 262 FP--INPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTA 339
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 2473932263 325 MFWSMAMVVIMLTWIGKRPVEEPFImnGQVLTTMYFSYFLI 365
Cdd:COG1290 340 LGVAFIVFFIVLTILGANPPIATLL--GSINTVTYFAFFLI 378
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-207 |
2.76e-85 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 257.30 E-value: 2.76e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 10 PVILMVNKALIDLPTPLNISMWWNLGSMLGLCLLIQIMSGLLLSMHYTSNIEMAYESIIHICRDVNKGWLMRTMHANGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 90 MFFFCIYLHVGRGLYYGSY--LYMYTWSTGVMIMLITMATAFMGYVLPWGQMSFWGATVITNMLSAIPYMGKELVQWLWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 2473932263 168 GFAVDNATLNRFFTMHFMLPFIIMAMVMMHLMFLHQTGSN 207
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
8.83e-76 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 232.66 E-value: 8.83e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 19 LIDLPTPLNISMWWNLGSMLGLCLLIQIMSGLLLSMHYTSNIEMAYESIIHICRDVNKGWLMRTMHANGASMFFFCIYLH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 99 VGRGLYYGSYLYMY--TWSTGVMIMLITMATAFMGYVLPWGQMSFWGATVITNMLSAIPYMGKELVQWLWGGFAVDNATL 176
Cdd:pfam00033 81 IFRGLYYGGFSYPRelTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 2473932263 177 NRFFTMHFMLPFIIMAMVMMHLMFLHQTG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
244-340 |
2.98e-08 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 52.49 E-value: 2.98e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 244 SIMYPYSMGDPdnfipANPLLTPIHIQPEWYFLFAYAILRSIPNKLGGVLALMMSIMIMMIMPFY-NKMKFKGNEFYPMN 322
Cdd:TIGR01156 55 AVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIeNVNKFQNPFRRPVA 129
|
90
....*....|....*...
gi 2473932263 323 QIMFWSMAMVVImltWIG 340
Cdd:TIGR01156 130 TTVFLFGTVVAL---WLG 144
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
14-366 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 618.34 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 14 MVNKALIDLPTPLNISMWWNLGSMLGLCLLIQIMSGLLLSMHYTSNIEMAYESIIHICRDVNKGWLMRTMHANGASMFFF 93
Cdd:MTH00156 3 IINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFFI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 94 CIYLHVGRGLYYGSYLYMYTWSTGVMIMLITMATAFMGYVLPWGQMSFWGATVITNMLSAIPYMGKELVQWLWGGFAVDN 173
Cdd:MTH00156 83 CIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVDN 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 174 ATLNRFFTMHFMLPFIIMAMVMMHLMFLHQTGSNNPIGMKSNTEKIPFHPYFSTKDSITFMLMVIMLMMTSIMYPYSMGD 253
Cdd:MTH00156 163 ATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLGD 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 254 PDNFIPANPLLTPIHIQPEWYFLFAYAILRSIPNKLGGVLALMMSIMIMMIMPFYNKMKFKGNEFYPMNQIMFWSMAMVV 333
Cdd:MTH00156 243 PENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVNIV 322
|
330 340 350
....*....|....*....|....*....|...
gi 2473932263 334 IMLTWIGKRPVEEPFIMNGQVLTTMYFSYFLIN 366
Cdd:MTH00156 323 ILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-377 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 573.00 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 1 MNKPMRLKNPVILMVNKALIDLPTPLNISMWWNLGSMLGLCLLIQIMSGLLLSMHYTSNIEMAYESIIHICRDVNKGWLM 80
Cdd:MTH00145 1 MLSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 81 RTMHANGASMFFFCIYLHVGRGLYYGSYLYMYTWSTGVMIMLITMATAFMGYVLPWGQMSFWGATVITNMLSAIPYMGKE 160
Cdd:MTH00145 81 RSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 161 LVQWLWGGFAVDNATLNRFFTMHFMLPFIIMAMVMMHLMFLHQTGSNNPIGMKSNTEKIPFHPYFSTKDSITFMLMVIML 240
Cdd:MTH00145 161 LVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 241 MMTSIMYPYSMGDPDNFIPANPLLTPIHIQPEWYFLFAYAILRSIPNKLGGVLALMMSIMIMMIMPFYNKMKFKGNEFYP 320
Cdd:MTH00145 241 VFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 2473932263 321 MNQIMFWSMAMVVIMLTWIGKRPVEEPFIMNGQVLTTMYFSYFLINIHAANMWDYFI 377
Cdd:MTH00145 321 LNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLILPLVQKLWDNIL 377
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 562.60 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 1 MNKPMRLKNPVILMVNKALIDLPTPLNISMWWNLGSMLGLCLLIQIMSGLLLSMHYTSNIEMAYESIIHICRDVNKGWLM 80
Cdd:MTH00119 1 MAPNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 81 RTMHANGASMFFFCIYLHVGRGLYYGSYLYMYTWSTGVMIMLITMATAFMGYVLPWGQMSFWGATVITNMLSAIPYMGKE 160
Cdd:MTH00119 81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 161 LVQWLWGGFAVDNATLNRFFTMHFMLPFIIMAMVMMHLMFLHQTGSNNPIGMKSNTEKIPFHPYFSTKDSITFMLMVIML 240
Cdd:MTH00119 161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 241 MMTSIMYPYSMGDPDNFIPANPLLTPIHIQPEWYFLFAYAILRSIPNKLGGVLALMMSIMIMMIMPFYNKMKFKGNEFYP 320
Cdd:MTH00119 241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRP 320
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 2473932263 321 MNQIMFWSMAMVVIMLTWIGKRPVEEPFIMNGQVLTTMYFSYFLI 365
Cdd:MTH00119 321 LSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLI 365
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
5-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 561.46 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 5 MRLKNPVILMVNKALIDLPTPLNISMWWNLGSMLGLCLLIQIMSGLLLSMHYTSNIEMAYESIIHICRDVNKGWLMRTMH 84
Cdd:MTH00191 1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 85 ANGASMFFFCIYLHVGRGLYYGSYLYMYTWSTGVMIMLITMATAFMGYVLPWGQMSFWGATVITNMLSAIPYMGKELVQW 164
Cdd:MTH00191 81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 165 LWGGFAVDNATLNRFFTMHFMLPFIIMAMVMMHLMFLHQTGSNNPIGMKSNTEKIPFHPYFSTKDSITFMLMVIMLMMTS 244
Cdd:MTH00191 161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 245 IMYPYSMGDPDNFIPANPLLTPIHIQPEWYFLFAYAILRSIPNKLGGVLALMMSIMIMMIMPFYNKMKFKGNEFYPMNQI 324
Cdd:MTH00191 241 LFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQV 320
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 2473932263 325 MFWSMAMVVIMLTWIGKRPVEEPFIMNGQVLTTMYFSYFLI 365
Cdd:MTH00191 321 VFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLL 361
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-378 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 557.37 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 1 MNKPMRLKNPVILMVNKALIDLPTPLNISMWWNLGSMLGLCLLIQIMSGLLLSMHYTSNIEMAYESIIHICRDVNKGWLM 80
Cdd:MTH00016 1 MFSPMRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 81 RTMHANGASMFFFCIYLHVGRGLYYGSYLYMYTWSTGVMIMLITMATAFMGYVLPWGQMSFWGATVITNMLSAIPYMGKE 160
Cdd:MTH00016 81 RNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 161 LVQWLWGGFAVDNATLNRFFTMHFMLPFIIMAMVMMHLMFLHQTGSNNPIGMKSNTEKIPFHPYFSTKDSITFMLMVIML 240
Cdd:MTH00016 161 LVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 241 MMTSIMYPYSMGDPDNFIPANPLLTPIHIQPEWYFLFAYAILRSIPNKLGGVLALMMSIMIMMIMPFYNKMKFKGNEFYP 320
Cdd:MTH00016 241 LSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 2473932263 321 MNQIMFWSMAMVVIMLTWIGKRPVEEPFIMNGQVLTTMYFSYFLINIHAANMWDYFIK 378
Cdd:MTH00016 321 LNQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMINPLLMKLWDKLLK 378
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
5-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 556.57 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 5 MRLKNPVILMVNKALIDLPTPLNISMWWNLGSMLGLCLLIQIMSGLLLSMHYTSNIEMAYESIIHICRDVNKGWLMRTMH 84
Cdd:MTH00131 4 LRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLH 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 85 ANGASMFFFCIYLHVGRGLYYGSYLYMYTWSTGVMIMLITMATAFMGYVLPWGQMSFWGATVITNMLSAIPYMGKELVQW 164
Cdd:MTH00131 84 ANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQW 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 165 LWGGFAVDNATLNRFFTMHFMLPFIIMAMVMMHLMFLHQTGSNNPIGMKSNTEKIPFHPYFSTKDSITFMLMVIMLMMTS 244
Cdd:MTH00131 164 IWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLA 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 245 IMYPYSMGDPDNFIPANPLLTPIHIQPEWYFLFAYAILRSIPNKLGGVLALMMSIMIMMIMPFYNKMKFKGNEFYPMNQI 324
Cdd:MTH00131 244 LFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQF 323
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 2473932263 325 MFWSMAMVVIMLTWIGKRPVEEPFIMNGQVLTTMYFSYFLI 365
Cdd:MTH00131 324 LFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLV 364
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
4-372 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 542.69 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 4 PMRLKNPVILMVNKALIDLPTPLNISMWWNLGSMLGLCLLIQIMSGLLLSMHYTSNIEMAYESIIHICRDVNKGWLMRTM 83
Cdd:MTH00100 3 NIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 84 HANGASMFFFCIYLHVGRGLYYGSYLYMYTWSTGVMIMLITMATAFMGYVLPWGQMSFWGATVITNMLSAIPYMGKELVQ 163
Cdd:MTH00100 83 HANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVE 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 164 WLWGGFAVDNATLNRFFTMHFMLPFIIMAMVMMHLMFLHQTGSNNPIGMKSNTEKIPFHPYFSTKDSITFMLMVIMLMMT 243
Cdd:MTH00100 163 WIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 244 SIMYPYSMGDPDNFIPANPLLTPIHIQPEWYFLFAYAILRSIPNKLGGVLALMMSIMIMMIMPFYNKMKFKGNEFYPMNQ 323
Cdd:MTH00100 243 VLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQ 322
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 2473932263 324 IMFWSMAMVVIMLTWIGKRPVEEPFIMNGQVLTTMYFSYFLINIHAANM 372
Cdd:MTH00100 323 CLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASL 371
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-374 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 541.58 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 1 MNKPMRLKNPVILMVNKALIDLPTPLNISMWWNLGSMLGLCLLIQIMSGLLLSMHYTSNIEMAYESIIHICRDVNKGWLM 80
Cdd:MTH00074 1 MAHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 81 RTMHANGASMFFFCIYLHVGRGLYYGSYLYMYTWSTGVMIMLITMATAFMGYVLPWGQMSFWGATVITNMLSAIPYMGKE 160
Cdd:MTH00074 81 RNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 161 LVQWLWGGFAVDNATLNRFFTMHFMLPFIIMAMVMMHLMFLHQTGSNNPIGMKSNTEKIPFHPYFSTKDSITFMLMVIML 240
Cdd:MTH00074 161 LVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTAL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 241 MMTSIMYPYSMGDPDNFIPANPLLTPIHIQPEWYFLFAYAILRSIPNKLGGVLALMMSIMIMMIMPFYNKMKFKGNEFYP 320
Cdd:MTH00074 241 ALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 2473932263 321 MNQIMFWSMAMVVIMLTWIGKRPVEEPFIMNGQVLTTMYFSYFLINIHAANMWD 374
Cdd:MTH00074 321 LTQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLE 374
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
4-365 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 527.74 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 4 PMRLKNPVILMVNKALIDLPTPLNISMWWNLGSMLGLCLLIQIMSGLLLSMHYTSNIEMAYESIIHICRDVNKGWLMRTM 83
Cdd:MTH00034 3 PLRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 84 HANGASMFFFCIYLHVGRGLYYGSYLYMYTWSTGVMIMLITMATAFMGYVLPWGQMSFWGATVITNMLSAIPYMGKELVQ 163
Cdd:MTH00034 83 HANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQ 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 164 WLWGGFAVDNATLNRFFTMHFMLPFIIMAMVMMHLMFLHQTGSNNPIGMKSNTEKIPFHPYFSTKDSITFMLMVIMLMMT 243
Cdd:MTH00034 163 WIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 244 SIMYPYSMGDPDNFIPANPLLTPIHIQPEWYFLFAYAILRSIPNKLGGVLALMMSIMIMMIMPFYNKMKFKGNEFYPMNQ 323
Cdd:MTH00034 243 ALLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQ 322
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 2473932263 324 IMFWSMAMVVIMLTWIGKRPVEEPFIMNGQVLTTMYFSYFLI 365
Cdd:MTH00034 323 IAFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLF 364
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-378 |
1.51e-177 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 498.68 E-value: 1.51e-177
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 1 MNKPMRLKNPVILMVNKALIDLPTPLNISMWWNLGSMLGLCLLIQIMSGLLLSMHYTSNIEMAYESIIHICRDVNKGWLM 80
Cdd:MTH00224 1 MFKPFRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 81 RTMHANGASMFFFCIYLHVGRGLYYGSYLYMYTWSTGVMIMLITMATAFMGYVLPWGQMSFWGATVITNMLSAIPYMGKE 160
Cdd:MTH00224 81 RSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 161 LVQWLWGGFAVDNATLNRFFTMHFMLPFIIMAMVMMHLMFLHQTGSNNPIGMKSNTEKIPFHPYFSTKDSITFMLMVIML 240
Cdd:MTH00224 161 LVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 241 MMTSIMYPYSMGDPDNFIPANPLLTPIHIQPEWYFLFAYAILRSIPNKLGGVLALMMSIMIMMIMPFYNKMKFKGNEFYP 320
Cdd:MTH00224 241 SLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 2473932263 321 MNQIMFWSMAMVVIMLTWIGKRPVEEPFIMNGQVLTTMYFSYFLINIHAANMWDYFIK 378
Cdd:MTH00224 321 LNQLLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYFIISPAISKLWDDLLN 378
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
4-367 |
6.71e-167 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 471.49 E-value: 6.71e-167
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 4 PMRLKNPVILMVNKALIDLPTPLNISMWWNLGSMLGLCLLIQIMSGLLLSMHYTSNIEMAYESIIHICRDVNKGWLMRTM 83
Cdd:MTH00022 2 PLRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 84 HANGASMFFFCIYLHVGRGLYYGSYLYMYTWSTGVMIMLITMATAFMGYVLPWGQMSFWGATVITNMLSAIPYMGKELVQ 163
Cdd:MTH00022 82 HANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 164 WLWGGFAVDNATLNRFFTMHFMLPFIIMAMVMMHLMFLHQTGSNNPIGMKSNTEKIPFHPYFSTKDSITFMLMVIMLMMT 243
Cdd:MTH00022 162 WVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFI 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 244 SIMYPYSMGDPDNFIPANPLLTPIHIQPEWYFLFAYAILRSIPNKLGGVLALMMSIMIMMIMPFYNKMKFKGNEFYPMNQ 323
Cdd:MTH00022 242 VYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGR 321
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 2473932263 324 IMFWSMAMVVIMLTWIGKRPVEEPFIMNGQVLTTMYFSYFLINI 367
Cdd:MTH00022 322 MAFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLI 365
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-365 |
2.95e-165 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 467.26 E-value: 2.95e-165
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 1 MNKPMRLKNPVILMVNKALIDLPTPLNISMWWNLGSMLGLCLLIQIMSGLLLSMHYTSNIEMAYESIIHICRDVNKGWLM 80
Cdd:MTH00053 1 MTKTIRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 81 RTMHANGASMFFFCIYLHVGRGLYYGSYLYMYTWSTGVMIMLITMATAFMGYVLPWGQMSFWGATVITNMLSAIPYMGKE 160
Cdd:MTH00053 81 RYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 161 LVQWLWGGFAVDNATLNRFFTMHFMLPFIIMAMVMMHLMFLHQTGSNNPIGMKSNTEKIPFHPYFSTKDSITFMLMVIML 240
Cdd:MTH00053 161 IVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 241 MMTSIMYPYSMGDPDNFIPANPLLTPIHIQPEWYFLFAYAILRSIPNKLGGVLALMMSIMIMMIMPFYNKMKFKGNEFYP 320
Cdd:MTH00053 241 SIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRP 320
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 2473932263 321 MNQIMFWSMAMVVIMLTWIGKRPVEEPFIMNGQVLTTMYFSYFLI 365
Cdd:MTH00053 321 LSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLI 365
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
5-365 |
1.50e-129 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 376.97 E-value: 1.50e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 5 MRLKNPVILMVNKALIDLPTPLNISMWWNLGSMLGLCLLIQIMSGLLLSMHYTSNIEMAYESIIHICRDVNKGWLMRTMH 84
Cdd:MTH00033 1 MRLRKTGLLEPVNDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 85 ANGASMFFFCIYLHVGRGLYYGSYLYMYTWSTGVMIMLITMATAFMGYVLPWGQMSFWGATVITNMLSAIPYMGKELVQW 164
Cdd:MTH00033 81 ANGASLFFICVYCHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEW 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 165 LWGGFAVDNATLNRFFTMHFMLPFIIMAMVMMHLMFLHQTGSNNPIGMKSNTEKIPFHPYFSTKDSITFMLMVIMLMMTS 244
Cdd:MTH00033 161 IWGGFSVSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 245 I--MYPYSMGDPDNFIPANPLLTPIHIQPEWYFLFAYAILRSIPNKLGGVLALMMSIMIMMIMPFYNKMKFKGNEFYPMN 322
Cdd:MTH00033 241 IepRIETLLQDPENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTG 320
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 2473932263 323 QIMFWSMAMVVIMLTWIGKRPV-EEPFIMNGQVLTTMYFSYFLI 365
Cdd:MTH00033 321 KFFFWFIVGDFIILTWIGSAPAgADPYVLIGRIATIFYFGYFLV 364
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
13-365 |
7.79e-118 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 345.77 E-value: 7.79e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 13 LMVNKALIDLPTPLNISMWWNLGSMLGLCLLIQIMSGLLLSMHYTSNIEMAYESIIHICRDVNKGWLMRTMHANGASMFF 92
Cdd:MTH00086 1 NFVNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 93 FCIYLHVGRGLYYGSYLYMYTWSTGVMIMLITMATAFMGYVLPWGQMSFWGATVITNMLSAIPYMGKELVQWLWGGFAVD 172
Cdd:MTH00086 81 IFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 173 NATLNRFFTMHFMLPFIIMAMVMMHLMFLHQTGSNNPIGMKSNTEKIPFHPYFSTKDSITfMLMVIMLMMTSIMYPYSMG 252
Cdd:MTH00086 161 SATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYN-IIFWLVFIIFSLFYPFNLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 253 DPDNFIPANPLLTPIHIQPEWYFLFAYAILRSIPNKLGGVLALMMSIMIMMIMPFYNkmkFKGNEFYPMNQIMFWSMAMV 332
Cdd:MTH00086 240 DPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVN---NYTSCLNKLNKFLVFSFIVV 316
|
330 340 350
....*....|....*....|....*....|...
gi 2473932263 333 VIMLTWIGKRPVEEPFIMNGQVLTTMYFSYFLI 365
Cdd:MTH00086 317 NVILSWLGQCLVEYPFLFLSQIFSFIYFFLILL 349
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
17-365 |
8.66e-112 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 331.75 E-value: 8.66e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 17 KALIDLPTPLNISMWWNLGSMLGLCLLIQIMSGLLLSMHYTSNIEMAYESIIHICRDVNKGWLMRTMHANGASMFFFCIY 96
Cdd:COG1290 25 REHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVY 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 97 LHVGRGLYYGSY-----LymyTWSTGVMIMLITMATAFMGYVLPWGQMSFWGATVITNMLSAIPYMGKELVQWLWGGFAV 171
Cdd:COG1290 105 LHMFRGFFYGAYkkpreL---NWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFP 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 172 DNATLNRFFTMHFM-LPFIIMAMVMMHLMFLHQTGSNNPIGMKSNTEK----IPFHPYFSTKDSITFMLMVIMLMMTSIM 246
Cdd:COG1290 182 GDATLNRFFALHVLlLPALLLALVVLHLWLLHRHGHNNPPGPERKKTEkvdgVPFHPYYTVKDGFGFFVFLGVFALLAFF 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 247 YPysMGDPDNFIPANPLLTPIHIQPEWYFLFAYAILRSIP--NKLGGVLALMMSIMIMMIMPFYNKMKFKGNEFYPMNQI 324
Cdd:COG1290 262 FP--INPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTA 339
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 2473932263 325 MFWSMAMVVIMLTWIGKRPVEEPFImnGQVLTTMYFSYFLI 365
Cdd:COG1290 340 LGVAFIVFFIVLTILGANPPIATLL--GSINTVTYFAFFLI 378
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-207 |
2.76e-85 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 257.30 E-value: 2.76e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 10 PVILMVNKALIDLPTPLNISMWWNLGSMLGLCLLIQIMSGLLLSMHYTSNIEMAYESIIHICRDVNKGWLMRTMHANGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 90 MFFFCIYLHVGRGLYYGSY--LYMYTWSTGVMIMLITMATAFMGYVLPWGQMSFWGATVITNMLSAIPYMGKELVQWLWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 2473932263 168 GFAVDNATLNRFFTMHFMLPFIIMAMVMMHLMFLHQTGSN 207
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
8.83e-76 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 232.66 E-value: 8.83e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 19 LIDLPTPLNISMWWNLGSMLGLCLLIQIMSGLLLSMHYTSNIEMAYESIIHICRDVNKGWLMRTMHANGASMFFFCIYLH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 99 VGRGLYYGSYLYMY--TWSTGVMIMLITMATAFMGYVLPWGQMSFWGATVITNMLSAIPYMGKELVQWLWGGFAVDNATL 176
Cdd:pfam00033 81 IFRGLYYGGFSYPRelTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 2473932263 177 NRFFTMHFMLPFIIMAMVMMHLMFLHQTG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
12-358 |
9.00e-76 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 238.34 E-value: 9.00e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 12 ILMVNKALIDLPTPLNISMWWNLGSMLGLCLLIQIMSGLLLSMHYTSNIEMAYESIIHICRDVNKGWLMRTMHANGASMF 91
Cdd:MTH00046 2 ISLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 92 FFCIYLHVGRGLYYGSYLYMYTWSTGVMIMLITMATAFMGYVLPWGQMSFWGATVITNMLSAIPYMGKELVQWLWGGFAV 171
Cdd:MTH00046 82 FILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSV 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 172 DNATLNRFFTMHFMLPFIIMAMVMMHLMFLHQTGSNNPIGMKSN-TEKIPFHPYFSTKDSITFMLMVIMLMMTSIMYPYS 250
Cdd:MTH00046 162 TGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGySDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDL 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 251 MGDPDNFIPANPLLTPIHIQPEWYFLFAYAILRSIPNKLGGvLALMMSIMIMMIMPFYNkmkfKGNEFYPMNQIMFWSMA 330
Cdd:MTH00046 242 VLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGG-LVLVLSFLFFLWVPTFN----GSSVYSVWRQVNFWLIV 316
|
330 340
....*....|....*....|....*...
gi 2473932263 331 MVVIMLTWIGKRPVEEPFIMNGQVLTTM 358
Cdd:MTH00046 317 SLFFSLSYLGGCHPEYPYLLISQLFSVL 344
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
89-254 |
1.08e-42 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 146.62 E-value: 1.08e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 89 SMFFFCIYLHVGRGLYYGSYLY--MYTWSTGVMIMLITMATAFMGYVLPWGQMSFWGATVITNMLSAIPYMGKELVQWLW 166
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKprELNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 167 GGFAVDNATLNRFFTMHFM-LPFIIMAMVMMHLMFLHQTGSNNPIGMKSNTEKIPFHPYFSTKDSITFMLMVIMLMMTSI 245
Cdd:pfam13631 81 GGPFPGTATIPRFYALHILlLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 2473932263 246 MYPYSMGDP 254
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
208-354 |
1.52e-40 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 140.09 E-value: 1.52e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 208 NPIGMKSNTEKIPFHPYFSTKDSITFMLMVIMLMMTSIMYPYSMGDPDNFIPANPLLTPIHIQPEWYFLFAYAILRSIPN 287
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2473932263 288 KLGGVLALMMSIMIMMIMPFYNKMKFKGNeFYPMNQIMFWSMAMVVIMLTWIGKRPVEEPFIMNGQV 354
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRSQ-FRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQL 146
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
34-210 |
3.25e-34 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 125.98 E-value: 3.25e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 34 LGSMLGLCLLIQIMSGLLLSMHYTSNIEMAYESIIHICRDVNKGWLMRTMHANGASMFFFCIYLHVGRGLYYGSYL--YM 111
Cdd:PRK03735 44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKkpRE 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 112 YTWSTGVMIMLITMATAFMGYVLPWGQMSFWGATVITNMLSAIPYMGKELVQWLWGGFAVDNATLNRFFTMH-FMLPFII 190
Cdd:PRK03735 124 LNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203
|
170 180
....*....|....*....|
gi 2473932263 191 MAMVMMHLMFLHQTGSNNPI 210
Cdd:PRK03735 204 AVLMLAHFLMIRKQGISGPL 223
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
259-359 |
9.25e-33 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 118.35 E-value: 9.25e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 259 PANPLLTPIHIQPEWYFLFAYAILRSIPNKLGGVLALMMSIMIMMIMPFYNKMKFKGNEFYPMNQIMFWSMAMVVIMLTW 338
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 2473932263 339 IGKRPVEEPFIMNGQVLTTMY 359
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| petB |
CHL00070 |
cytochrome b6 |
25-210 |
4.11e-30 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 114.82 E-value: 4.11e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 25 PLNISMWWNLGSMLGLCLLIQIMSGLLLSMHYTSNIEMAYESIIHICRDVNKGWLMRTMHANGASMFFFCIYLHVGRGLY 104
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 105 YGSYL--YMYTWSTGVMIMLITMATAFMGYVLPWGQMSFWGATVITNMLSAIPYMGKELVQWLWGGFAVDNATLNRFFTM 182
Cdd:CHL00070 107 TGGFKkpRELTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170 180
....*....|....*....|....*....
gi 2473932263 183 H-FMLPFIIMAMVMMHLMFLHQTGSNNPI 210
Cdd:CHL00070 187 HtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
244-307 |
7.13e-10 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 57.32 E-value: 7.13e-10
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2473932263 244 SIMYPYSMGDPdnfipANPLLTPIHIQPEWYFLFAYAILRSIPNKLGGVLALMMSIMIMMIMPF 307
Cdd:CHL00058 55 AVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPF 113
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
244-348 |
1.33e-09 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 56.34 E-value: 1.33e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 244 SIMYPYSMGDPdnfipANPLLTPIHIQPEWYFLFAYAILRSIPNKLGGVLALMMSIMIMMIMPFY-NKMKFKgNEFYPMN 322
Cdd:COG5679 56 AVLDPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIeNVNKFQ-NPFRRPV 129
|
90 100
....*....|....*....|....*..
gi 2473932263 323 QIMFWSMAMVVIMLTWIGKR-PVEEPF 348
Cdd:COG5679 130 ATAVFLFGTLVTLWLGIGAAlPIDKSL 156
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
244-340 |
2.98e-08 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 52.49 E-value: 2.98e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932263 244 SIMYPYSMGDPdnfipANPLLTPIHIQPEWYFLFAYAILRSIPNKLGGVLALMMSIMIMMIMPFY-NKMKFKGNEFYPMN 322
Cdd:TIGR01156 55 AVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIeNVNKFQNPFRRPVA 129
|
90
....*....|....*...
gi 2473932263 323 QIMFWSMAMVVImltWIG 340
Cdd:TIGR01156 130 TTVFLFGTVVAL---WLG 144
|
|
| |
