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Conserved domains on  [gi|2473932296|ref|YP_010735824|]
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ATP synthase F0 subunit 6 (mitochondrion) [Myrmeleomastax wideis]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 2.73e-87

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 257.02  E-value: 2.73e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296   1 MMTNLFSTFDPSTNiMNLSINWVSSIMVLFILPTIYWLMPSRIMIIFHNINNYLYKEFKMLMGNNKSfKMMLMFISILMM 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNK-GSTLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296  81 MVLNNFMGLFPYIFTSTSHLAMTLSIALPIWISFMLYGWIINTNNMFTHLVPQGTPNILMSFMVLIETISNIIRPGTLAV 160
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2473932296 161 RLSANMIAGHLLLTLIGNTGTSISYKLMLFMLIIQLMLMMLESAVAVIQGYVFSVLSILYSSEVH 225
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 2.73e-87

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 257.02  E-value: 2.73e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296   1 MMTNLFSTFDPSTNiMNLSINWVSSIMVLFILPTIYWLMPSRIMIIFHNINNYLYKEFKMLMGNNKSfKMMLMFISILMM 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNK-GSTLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296  81 MVLNNFMGLFPYIFTSTSHLAMTLSIALPIWISFMLYGWIINTNNMFTHLVPQGTPNILMSFMVLIETISNIIRPGTLAV 160
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2473932296 161 RLSANMIAGHLLLTLIGNTGTSISYKLMLFMLIIQLMLMMLESAVAVIQGYVFSVLSILYSSEVH 225
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-223 1.01e-43

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 146.20  E-value: 1.01e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296   5 LFSTFDPSTNIMNLSINW-----VSSIMVLFILPTIYWLMPSRIMIIFHNINNYLYKEFKMLMGNnKSFKMMLMFISILM 79
Cdd:TIGR01131   1 LFSQFDISPITLFSLTLLslillLSLLIFLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGG-KKGKFFPLIFTLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296  80 MMVLNNFMGLFPYIFTSTSHLAMTLSIALPIWISFMLYGWIINTNNMFTHLVPQGTPNILMSFMVLIETISNIIRPGTLA 159
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2473932296 160 VRLSANMIAGHLLLTLIGNTG-TSISYKLMLFMLIIQLMLMMLESAVAVIQGYVFSVLSILYSSE 223
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLfSLMSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLND 224
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 69-222 3.52e-39

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 132.52  E-value: 3.52e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296  69 KMMLMFISILMMMVLNNFMGLFPYIFTSTSHLAMTLSIALPIWISFMLYGWIINTNNMFTHLVPQGTPNILMSFMVLIET 148
Cdd:cd00310     3 KYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIEL 82

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2473932296 149 ISNIIRPGTLAVRLSANMIAGHLLLTLIGNTGTSISYKLMLFMLIIQLMLMMLESAVAVIQGYVFSVLSILYSS 222
Cdd:cd00310    83 ISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP-synt_A pfam00119
ATP synthase A chain;
22-222 6.74e-25

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 97.18  E-value: 6.74e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296  22 WVSSIMVLFILPTIYW----LMPSRIMIIFHNINNYLYKEFKMLMGNNKSFKMMLMFISILMMMVLNNFMGLF---PYIF 94
Cdd:pfam00119   5 LIVALILLLFLLLATRktkkLVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296  95 TSTSHLAMTLSIALPIWISFMLYGWIIN-TNNMFTHLVPQGTPNILMSFMVLIETISNIIRPGTLAVRLSANMIAGHLLL 173
Cdd:pfam00119  85 TVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2473932296 174 TLI---GNTGTSISYKLMLFMLIIQLMLMMLESAVAVIQGYVFSVLSILYSS 222
Cdd:pfam00119 165 LLLaglIFALLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 38-225 7.61e-20

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 83.97  E-value: 7.61e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296  38 LMPSRIMIIFHNINNYLYKEFKMLMGNnKSFKMMLMFISILMMMVLNNFMGLFPYIFTSTSHLAMTLSIALPIWISFMLY 117
Cdd:COG0356    26 LVPGGLQNFVEMLVEFVRNQVKDTIGK-KGRKFAPLLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYY 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296 118 GWIIN-TNNMFTHLVPQGTPnILMSFMVLIETISNIIRPGTLAVRLSANMIAGHLLLTLIgnTGTSISYKLMLFMLIIQL 196
Cdd:COG0356   105 GIKKKgLGGYLKHLFFPPFP-WLAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLL--AGLAPFLLLGVLSLLLPV 181

                         170       180
                  ....*....|....*....|....*....
gi 2473932296 197 MLMMLESAVAVIQGYVFSVLSILYSSEVH 225
Cdd:COG0356   182 AWTAFELLVGFLQAYIFTMLTAVYISLAV 210
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 2.73e-87

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 257.02  E-value: 2.73e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296   1 MMTNLFSTFDPSTNiMNLSINWVSSIMVLFILPTIYWLMPSRIMIIFHNINNYLYKEFKMLMGNNKSfKMMLMFISILMM 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNK-GSTLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296  81 MVLNNFMGLFPYIFTSTSHLAMTLSIALPIWISFMLYGWIINTNNMFTHLVPQGTPNILMSFMVLIETISNIIRPGTLAV 160
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2473932296 161 RLSANMIAGHLLLTLIGNTGTSISYKLMLFMLIIQLMLMMLESAVAVIQGYVFSVLSILYSSEVH 225
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-223 1.01e-43

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 146.20  E-value: 1.01e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296   5 LFSTFDPSTNIMNLSINW-----VSSIMVLFILPTIYWLMPSRIMIIFHNINNYLYKEFKMLMGNnKSFKMMLMFISILM 79
Cdd:TIGR01131   1 LFSQFDISPITLFSLTLLslillLSLLIFLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGG-KKGKFFPLIFTLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296  80 MMVLNNFMGLFPYIFTSTSHLAMTLSIALPIWISFMLYGWIINTNNMFTHLVPQGTPNILMSFMVLIETISNIIRPGTLA 159
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2473932296 160 VRLSANMIAGHLLLTLIGNTG-TSISYKLMLFMLIIQLMLMMLESAVAVIQGYVFSVLSILYSSE 223
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLfSLMSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLND 224
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 1-224 9.18e-42

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 141.32  E-value: 9.18e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296   1 MMTNLFSTFDP--STNIMNLSINWVSSIMVLFILPTIYWLMPSRIMIIFHNINNYLYkEFKMLMGNNKSFKMMLMFISIL 78
Cdd:MTH00176    1 MLVDLFSSFDPpnKNIFSMISLSWITLLLFLLLMPSSVWFCPSKLQVFMLMFSTFLP-EMILRSNGSYILGSASIIISLF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296  79 MMMVLNNFMGLFPYIFTSTSHLAMTLSIALPIWISFMLYGWIINTNNMFTHLVPQGTPNILMSFMVLIETISNIIRPGTL 158
Cdd:MTH00176   80 ILVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTL 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2473932296 159 AVRLSANMIAGHLLLTLIGNTG---TSISYKLMLFMLIIQLMLMMLESAVAVIQGYVFSVLSILYSSEV 224
Cdd:MTH00176  160 AVRLAANLSAGHLLLGLLGAAMwglLPVSPLIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDEH 228
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 69-222 3.52e-39

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 132.52  E-value: 3.52e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296  69 KMMLMFISILMMMVLNNFMGLFPYIFTSTSHLAMTLSIALPIWISFMLYGWIINTNNMFTHLVPQGTPNILMSFMVLIET 148
Cdd:cd00310     3 KYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIEL 82

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2473932296 149 ISNIIRPGTLAVRLSANMIAGHLLLTLIGNTGTSISYKLMLFMLIIQLMLMMLESAVAVIQGYVFSVLSILYSS 222
Cdd:cd00310    83 ISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 1-223 1.04e-37

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 131.01  E-value: 1.04e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296   1 MMTNLFSTFDPSTNIMNL----SINWVSSIMVLFILPTIYWLMPSRIMIIFHNINNYLYKEFKMLMGNN-KSFKMMLmfI 75
Cdd:MTH00005    1 MLTDIFSSFDPATNSLFNnlssTAFWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFGKHlKGFSSLI--S 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296  76 SILMMMVLNNFMGLFPYIFTSTSHLAMTLSIALPIWISFMLYGWIINTNNMFTHLVPQGTPNILMSFMVLIETISNIIRP 155
Cdd:MTH00005   79 ALFTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRP 158

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2473932296 156 GTLAVRLSANMIAGHLLLTLIGNTGTS--ISYKLMLFMLI-IQLMLMMLESAVAVIQGYVFSVLSILYSSE 223
Cdd:MTH00005  159 ITLSFRLAANMSAGHIVLSLIGIYAASalFSSISSTILLIlTQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 1-223 3.51e-36

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 126.90  E-value: 3.51e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296   1 MMTNLFSTFDPSTNIMNL--SINWVSSIMVLFILPTIYWLMPSRIMIIFHNINNYLYKEFKMLMGNNKSfKMMLMFISIL 78
Cdd:MTH00173    1 MMVDLFSSFDDHNSSFSSlsFLMWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSGLNLG-GFSLLLSSLF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296  79 MMMVLNNFMGLFPYIFTSTSHLAMTLSIALPIWISFMLYGWIINTNNMFTHLVPQGTPNILMSFMVLIETISNIIRPGTL 158
Cdd:MTH00173   80 LFLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTL 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2473932296 159 AVRLSANMIAGHLLLTLIGNTGTS----ISYKLMLFMLIIQLMLMMLESAVAVIQGYVFSVLSILYSSE 223
Cdd:MTH00173  160 TVRLLANISAGHIVLTLIGNYLSSslfsSSVVSLLLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 1-220 6.85e-36

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 126.22  E-value: 6.85e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296   1 MMTNLFSTFDPSTnIMNLSINWVSSIMVLFILPTIYWLMPSRIMIIFHNINNYLYKEFkMLMGNNKSFKMMLMFISILMM 80
Cdd:MTH00101    1 MNENLFASFITPT-ILGLPIVTLIIMFPSLLFPTPNRLINNRLISIQQWLIQLTSKQM-MTIHNTKGQTWSLMLMSLILF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296  81 MVLNNFMGLFPYIFTSTSHLAMTLSIALPIWISFMLYGWIINTNNMFTHLVPQGTPNILMSFMVLIETISNIIRPGTLAV 160
Cdd:MTH00101   79 IGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2473932296 161 RLSANMIAGHLLLTLIGNTG---TSISYKLMLFMLIIQLMLMMLESAVAVIQGYVFSVLSILY 220
Cdd:MTH00101  159 RLTANITAGHLLIHLIGGATlalMSISTTTALITFIILILLTILEFAVALIQAYVFTLLVSLY 221
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 3-223 1.05e-35

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 125.86  E-value: 1.05e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296   3 TNLFSTFDPSTnIMNLSINWVSSIMVL---FILPTIYWLmPSRIMIIFHNINNYLykeFKMLM--GNNKSFKMMLMFISI 77
Cdd:MTH00035    5 NSIFGQFSPDT-ILFIPLTLLSSVIALswlFFINPTNWL-PSRSQSIWLTFRQEI---LKLIFqnTNPNTAPWAGLLTTV 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296  78 LMMMVLNNFMGLFPYIFTSTSHLAMTLSIALPIWISFMLYGWIINTNNMFTHLVPQGTPNILMSFMVLIETISNIIRPGT 157
Cdd:MTH00035   80 FILILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIA 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2473932296 158 LAVRLSANMIAGHLLLTLIGNTGTSISYKLMLFM--LIIQLMLMMLESAVAVIQGYVFSVLSILYSSE 223
Cdd:MTH00035  160 LGLRLAANLTAGHLLIFLLSTAIWELSNSPLISIitLIIFFLLFILEIGVACIQAYVFTALVHFYLEQ 227
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 1-223 2.10e-33

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 119.67  E-value: 2.10e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296   1 MMTNLFSTFDpSTNIMNLSINWVSSIMVLFILPTIYWLMP-SRIMIIFHNINNYLYKEFkMLMGNNKSFKMMLMFISILM 79
Cdd:MTH00179    1 MMLSMFDQFE-SPSLLGIPLLALALLLPWLLFPSLTNRWLnNRLSTLQSWFFGSFTFQL-MQPINKKGHKWAVLFLSLML 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296  80 MMVLNNFMGLFPYIFTSTSHLAMTLSIALPIWISFMLYGWIINTNNMFTHLVPQGTPNILMSFMVLIETISNIIRPGTLA 159
Cdd:MTH00179   79 FLLTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALG 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2473932296 160 VRLSANMIAGHLLLTLIGNT---GTSISYKLMLFMLIIQLMLMMLESAVAVIQGYVFSVLSILYSSE 223
Cdd:MTH00179  159 VRLTANITAGHLLMHLISSAvfvLMNFMGMVALLTLLVLFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 1-223 6.11e-33

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 118.39  E-value: 6.11e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296   1 MMTNLFSTFDpSTNIMNLSINWVSSIM-VLFILPTIYWLMPSRIMIIFHNINNYLYKEFkMLMGNNKSFKMMLMFISILM 79
Cdd:MTH00120    1 MNLNFFDQFS-SPELLGIPLILLAMLIpALLIPSPKNRLLTNRLTTLQLWLIKLITKQL-MLPLNKKGHKWALILTSLML 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296  80 MMVLNNFMGLFPYIFTSTSHLAMTLSIALPIWISFMLYGWIINTNNMFTHLVPQGTPNILMSFMVLIETISNIIRPGTLA 159
Cdd:MTH00120   79 LLLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALG 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2473932296 160 VRLSANMIAGHLLLTLIGNTG---TSISYKLMLFMLIIQLMLMMLESAVAVIQGYVFSVLSILYSSE 223
Cdd:MTH00120  159 VRLTANLTAGHLLIQLISTATlnlLPTMPTLSLLTLIILLLLTILELAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 69-223 1.26e-29

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 109.96  E-value: 1.26e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296  69 KMMLMFISILMMMVLNNFMGLFPYIFTSTSHLAMTLSIALPIWISFMLYGWIINTNNMFTHLVPQGTPNILMSFMVLIET 148
Cdd:MTH00132   68 KWALLLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIET 147

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2473932296 149 ISNIIRPGTLAVRLSANMIAGHLLLTLIGnTGTSISYKLM----LFMLIIQLMLMMLESAVAVIQGYVFSVLSILYSSE 223
Cdd:MTH00132  148 ISLFIRPLALGVRLTANLTAGHLLIQLIA-TAAFVLLPLMptvaILTATLLFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 1-223 1.38e-28

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 107.36  E-value: 1.38e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296   1 MMTNLFSTFDPSTnIMNLSINWVSSIM--VLFILPTIYWLmPSRIMIIFHNINNYLYKEFkMLMGNNKSFKMMLMFISIL 78
Cdd:MTH00073    1 MNLSFFDQFLSPT-LLGIPLIMLAMLLpwLLFPTPTNKWL-NNRLSTLQIWFLQNFTKQL-MLPLNTPGHKWALILTSLM 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296  79 MMMVLNNFMGLFPYIFTSTSHLAMTLSIALPIWISFMLYGWIINTNNMFTHLVPQGTPNILMSFMVLIETISNIIRPGTL 158
Cdd:MTH00073   78 VFLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPLAL 157

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2473932296 159 AVRLSANMIAGHLLLTLIgNTGTSISYKLM----LFMLIIQLMLMMLESAVAVIQGYVFSVLSILYSSE 223
Cdd:MTH00073  158 GVRLTANLTAGHLLIQLI-STATLVLLPLMptvsILTMIVLFLLTLLEIAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 15-220 4.89e-27

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 103.20  E-value: 4.89e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296  15 IMNLSINWVSSIMVLFILPTIYWLMPSRIMIIFHNINNYLYKEFKMLMGNNkSFKMMLMFISILMMMVLNNFMGLFPYIF 94
Cdd:MTH00172   17 LTNSSIMMILVIIVVLLLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNE-GLKYFPFIISLFFFIVFLNLLGLFPYVF 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296  95 TSTSHLAMTLSIALPIWISFMLYGWIINTNNMFTHLVPQGTPNILMSFMVLIETISNIIRPGTLAVRLSANMIAGHLLLT 174
Cdd:MTH00172   96 TPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAANLSAGHLLFA 175

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 2473932296 175 LIGNTGTSI---SYKLMLFMLIIQLMLMMLESAVAVIQGYVFSVLSILY 220
Cdd:MTH00172  176 ILAGFGFNMlcaSGFLSLFPLLIMVFITLLEIAVAVIQAYVFCLLTTIY 224
ATP-synt_A pfam00119
ATP synthase A chain;
22-222 6.74e-25

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 97.18  E-value: 6.74e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296  22 WVSSIMVLFILPTIYW----LMPSRIMIIFHNINNYLYKEFKMLMGNNKSFKMMLMFISILMMMVLNNFMGLF---PYIF 94
Cdd:pfam00119   5 LIVALILLLFLLLATRktkkLVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296  95 TSTSHLAMTLSIALPIWISFMLYGWIIN-TNNMFTHLVPQGTPNILMSFMVLIETISNIIRPGTLAVRLSANMIAGHLLL 173
Cdd:pfam00119  85 TVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2473932296 174 TLI---GNTGTSISYKLMLFMLIIQLMLMMLESAVAVIQGYVFSVLSILYSS 222
Cdd:pfam00119 165 LLLaglIFALLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 17-220 4.38e-24

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 95.84  E-value: 4.38e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296  17 NLSINWVSSIMVLFILPTIYWLMPSRIMIIFHNINNYLYKEFKMLMGNNKSfKMMLMFISILMMMVLNNFMGLFPYIFTS 96
Cdd:MTH00175   30 NSSMMMVLAVIIFWLLLKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQ-KYFPFILSLFLFIAILNILGLFPYVFTP 108

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296  97 TSHLAMTLSIALPIWISFMLYGWIINTNNMFTHLVPQGTPNILMSFMVLIETISNIIRPGTLAVRLSANMIAGHLLLTLI 176
Cdd:MTH00175  109 TAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIRAISLGVRLAANISAGHLLFAIL 188

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*...
gi 2473932296 177 G----NTGTSISYKLMLFMLIIQLMLMMLESAVAVIQGYVFSVLSILY 220
Cdd:MTH00175  189 SgfafNMLSNGLIILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIY 236
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 38-225 7.61e-20

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 83.97  E-value: 7.61e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296  38 LMPSRIMIIFHNINNYLYKEFKMLMGNnKSFKMMLMFISILMMMVLNNFMGLFPYIFTSTSHLAMTLSIALPIWISFMLY 117
Cdd:COG0356    26 LVPGGLQNFVEMLVEFVRNQVKDTIGK-KGRKFAPLLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYY 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296 118 GWIIN-TNNMFTHLVPQGTPnILMSFMVLIETISNIIRPGTLAVRLSANMIAGHLLLTLIgnTGTSISYKLMLFMLIIQL 196
Cdd:COG0356   105 GIKKKgLGGYLKHLFFPPFP-WLAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLL--AGLAPFLLLGVLSLLLPV 181

                         170       180
                  ....*....|....*....|....*....
gi 2473932296 197 MLMMLESAVAVIQGYVFSVLSILYSSEVH 225
Cdd:COG0356   182 AWTAFELLVGFLQAYIFTMLTAVYISLAV 210
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 38-220 7.30e-18

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 79.60  E-value: 7.30e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296  38 LMPSRIMIIFHNINNYLYKEFKMLMGNnKSFKMMLMFISILMMMVLNNFMGLFPYIFTSTSHLAMTLSIALPIWISFMLY 117
Cdd:MTH00174   59 LVPNRILVGLELIYSHFYTVLKDNLGN-KGGNYLAFVLSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLA 137

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296 118 GWIINTNNMFTHLVPQGTPNILMSFMVLIETISNIIRPGTLAVRLSANMIAGHLLLTLIGNTGTSISYKLMLF----MLI 193
Cdd:MTH00174  138 GLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMINTGILIgsfvPFA 217

                         170       180
                  ....*....|....*....|....*..
gi 2473932296 194 IQLMLMMLESAVAVIQGYVFSVLSILY 220
Cdd:MTH00174  218 ILIFVTILEMAVAIIQAYVFTLLTIVY 244
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 65-225 9.45e-17

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 75.99  E-value: 9.45e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296  65 NKSFKMMLMFISILMMMVLNNFMGLFP-YIFTSTSHLAMTLSIALPIWISFMLYGWIIN-TNNMFTHLVPQGTPnilmsF 142
Cdd:PRK05815   67 GKGKKFAPLAFTLFLFILLMNLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGIKKKgLGGYLKEFYLQPHP-----L 141

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296 143 MVLIETISNIIRPGTLAVRLSANMIAGHLLLTLIGNTGTSISYkLMLFMLIIQLMLMMLESAVAVIQGYVFSVLSILYSS 222
Cdd:PRK05815  142 LLPIEIISEFSRPISLSLRLFGNMLAGELILALIALLGGAGLL-LALAPLILPVAWTIFEIFVGTLQAYIFMMLTIVYIS 220


                  ...
gi 2473932296 223 EVH 225
Cdd:PRK05815  221 MAV 223
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 69-220 7.91e-11

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 60.53  E-value: 7.91e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296  69 KMMLMFISILMMMVLNNFMGLFPYIFTSTSHLAMTLSIAlpIWISFMLYGWIINTNNM---FTHLVpQGTPNILMSFMVL 145
Cdd:PRK13419  169 KFLPYLLTVFFFILVCNLLGLVPYGATATGNINVTLTLA--VFTFFITQYAAIKAHGIkgyLAHLT-GGTHWSLWIIMIP 245

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2473932296 146 IETISNIIRPGTLAVRLSANMIAGHL-LLTLIGNTGTSISYKLMLFMLI-IQLMLMMLESAVAVIQGYVFSVLSILY 220
Cdd:PRK13419  246 IEFIGLFTKPFALTVRLFANMTAGHIvILSLIFISFILKSYIVAVAVSVpFAIFIYLLELFVAFLQAYIFTMLSALF 322
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 74-223 6.76e-08

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 50.75  E-value: 6.76e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296  74 FISILMMMVLNNFMGLFPYIFTSTSHLAMTLSIALPIWISFMLYgwIINTNNMFTHLVPQGTPNILMSF-MVLIETISNI 152
Cdd:MTH00087   55 SFFTFIVLLLFCFGGLFPYSFSPCGMVEFTFLYALVAWLSTFLS--FLSKSEKFSVYLSKGSDSFLKTFsMLFVEIVSEL 132

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2473932296 153 IRPGTLAVRLSANMIAGHLLLTLIGNTGtsisyklmLFMLIIQLMLMMLESAVAVIQGYVFSVLSILYSSE 223
Cdd:MTH00087  133 SRPLALTLRLTVNLMVGHLISSLLNFLG--------EKYVWLSILAIMMECFVAFIQSYIFSRLIYLYLNE 195
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 95-220 4.76e-07

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 49.50  E-value: 4.76e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296  95 TSTSHLAMTLSIALPIWISFMLYGWIINTNNMFTHLVPQGTPNILMSFMVLIETI-SNIIRPGTLAVRLSANMIAGH-LL 172
Cdd:PRK13417  217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHvII 296

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 2473932296 173 LTLIGNTGTSISYKLMLFMLIIQLMLMMLESAVAVIQGYVFSVLSILY 220
Cdd:PRK13417  297 LALMGFIFQFQSWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLF 344
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 46-225 4.21e-06

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 45.26  E-value: 4.21e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296  46 IFHNINNYLYKEFKMLMGNNKSfkmmLMFISILMMMVLNNFMGL-FPYIFTSTSHLAMTLSIALPIWISFMLYGWIINTN 124
Cdd:MTH00050    1 MFVNDFSSLFSLIYKLILGGSV----SYYYSVVLFIVLFLFLLYrLPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLN 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296 125 NMFTHLVPQGTPNILMSFMVLIETISNIIRPGTLAVRLSANMIAGHLLLTLIGNTgTSISYKLMLFMLIiqlmLMMLESA 204
Cdd:MTH00050   77 EFFSSFVPVGTPLYICPFVCIAETISYIIRPVVLILRPFINISLGCFGGVALGNL-CFISYWWFLVLFF----LFFYEVF 151

                         170       180
                  ....*....|....*....|.
gi 2473932296 205 VAVIQGYVfsVLSILYSSEVH 225
Cdd:MTH00050  152 VALVHWFI--VSSILSFSVDH 170
PRK13421 PRK13421
F0F1 ATP synthase subunit A; Provisional
 76-220 6.87e-04

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237383  Cd Length: 223  Bit Score: 39.68  E-value: 6.87e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296  76 SILMMMVLNNFMGLFPYIFTSTSHLAMTLSIALPIWISFMLYGwiINTNNMFTHLVPQGTPNILMSFMVLIETISniiRP 155
Cdd:PRK13421   83 TLFLFVLVANWSSLVPGVEPPTAHLETDAALALIVFLATIYYG--VRARGVRGYLATFAEPTWVMIPLNLVEQLT---RT 157

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2473932296 156 GTLAVRLSANMIAGHLLLTLIgntgtsisykLMLFMLIIQLMLMMLESAVAVIQGYVFSVLSILY 220
Cdd:PRK13421  158 FSLIVRLFGNVMSGVFVIGIV----------LSLAGLLVPIPLMALDLLTGAVQAYIFAVLAMVF 212
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 38-220 1.15e-03

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 38.96  E-value: 1.15e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296  38 LMPSRIMIIFHNINNYLYKEFKMLMGNNksFKMMLMFISILMMMVL-NNFMGLFPYIFTSTSHLAMTLSIALPIWISFML 116
Cdd:PRK13420   43 LDPGRFQVALEGVVSTIEDAIKEVLPRH--ARLVLPFVGTLWIFILvANLIGLIPGFHSPTADLSVTAALALLVFFSVHW 120

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932296 117 YGwiINTNNMFTHLVPQGTPN-ILMSFMVlietISNIIRPGTLAVRLSANMIAGHLLLTLIgntgtsisykLMLFMLIIQ 195
Cdd:PRK13420  121 FG--IRAEGLREYLKHYLSPSpFLLPFHL----ISEITRTLALAVRLFGNIMSLELAALLV----------LLVAGFLVP 184

                         170       180
                  ....*....|....*....|....*
gi 2473932296 196 LMLMMLESAVAVIQGYVFSVLSILY 220
Cdd:PRK13420  185 VPILMLHIIEALVQAYIFGMLALIY 209
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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