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Conserved domains on  [gi|2473932298|ref|YP_010735826|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Myrmeleomastax wideis]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009588)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 11-116 2.10e-40

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 129.98  E-value: 2.10e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932298  11 AVLIPIVVMMIANILSKKMINDREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLIIPIMLMFKSSMISTLY 90
Cdd:MTH00148   11 ALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSLGSSFSVWSL 90

                          90       100
                  ....*....|....*....|....*.
gi 2473932298  91 TSTLFFITILLMGLYHEWNQGALKWA 116
Cdd:MTH00148   91 TSLFIFLLILILGLFHEWNEGSLDWV 116
 
Name Accession Description Interval E-value
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 11-116 2.10e-40

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 129.98  E-value: 2.10e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932298  11 AVLIPIVVMMIANILSKKMINDREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLIIPIMLMFKSSMISTLY 90
Cdd:MTH00148   11 ALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSLGSSFSVWSL 90

                          90       100
                  ....*....|....*....|....*.
gi 2473932298  91 TSTLFFITILLMGLYHEWNQGALKWA 116
Cdd:MTH00148   91 TSLFIFLLILILGLFHEWNEGSLDWV 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 2.81e-26

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 93.64  E-value: 2.81e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932298  19 MMIANILSKKmINDREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLIIPIMLMFKSSMISTLyTSTLFFIT 98
Cdd:pfam00507   1 LLLSRLLGPK-RPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFRELGWFGF-VEMLIFIA 78

                          90
                  ....*....|....*.
gi 2473932298  99 ILLMGLYHEWNQGALK 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 11-115 1.65e-24

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 89.80  E-value: 1.65e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932298  11 AVLIPIVVMMIANILSKKMiNDREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLIIPIMLMFKSSMISTLY 90
Cdd:COG0838    15 ALGLALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWFGLI 93

                          90       100
                  ....*....|....*....|....*
gi 2473932298  91 tSTLFFITILLMGLYHEWNQGALKW 115
Cdd:COG0838    94 -EMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 11-116 2.10e-40

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 129.98  E-value: 2.10e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932298  11 AVLIPIVVMMIANILSKKMINDREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLIIPIMLMFKSSMISTLY 90
Cdd:MTH00148   11 ALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSLGSSFSVWSL 90

                          90       100
                  ....*....|....*....|....*.
gi 2473932298  91 TSTLFFITILLMGLYHEWNQGALKWA 116
Cdd:MTH00148   91 TSLFIFLLILILGLFHEWNEGSLDWV 116
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 11-115 4.29e-38

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 124.12  E-value: 4.29e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932298  11 AVLIPIVVMMIANILSKKMINDREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLIIPIMLMFKSSMISTLY 90
Cdd:MTH00161    9 ILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWL 88

                          90       100
                  ....*....|....*....|....*
gi 2473932298  91 TSTLFFITILLMGLYHEWNQGALKW 115
Cdd:MTH00161   89 ITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 11-116 6.36e-34

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 113.55  E-value: 6.36e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932298  11 AVLIPIVVMMIANILSKKMINDREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLIIPIMLMFKSSMISTLY 90
Cdd:MTH00202   11 SILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLKSSWSKGGL 90

                          90       100
                  ....*....|....*....|....*.
gi 2473932298  91 TSTLFFITILLMGLYHEWNQGALKWA 116
Cdd:MTH00202   91 LGGTIFLLILIGGLIHEWKEGSLDWV 116
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 11-116 4.72e-32

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 109.18  E-value: 4.72e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932298  11 AVLIPIVVMMIANILSKKMINDREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLIIPIMLMFKSSMISTLY 90
Cdd:MTH00012   11 SLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILMTSTSKTVV 90

                          90       100
                  ....*....|....*....|....*.
gi 2473932298  91 TSTLFFITILLMGLYHEWNQGALKWA 116
Cdd:MTH00012   91 YTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 34-116 1.16e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 95.39  E-value: 1.16e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932298  34 EKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLIIPIMLMFKSSMISTLYTSTLFFITILLMGLYHEWNQGAL 113
Cdd:MTH00106   32 EKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNTMLTMALLLISLLALSLAYEWTQKGL 111


                  ...
gi 2473932298 114 KWA 116
Cdd:MTH00106  112 EWT 114
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 2.81e-26

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 93.64  E-value: 2.81e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932298  19 MMIANILSKKmINDREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLIIPIMLMFKSSMISTLyTSTLFFIT 98
Cdd:pfam00507   1 LLLSRLLGPK-RPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFRELGWFGF-VEMLIFIA 78

                          90
                  ....*....|....*.
gi 2473932298  99 ILLMGLYHEWNQGALK 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 32-117 1.80e-25

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 92.35  E-value: 1.80e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932298  32 DREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLIIPIMLMFKSSMISTLYTSTLFFITILLMGLYHEWNQG 111
Cdd:MTH00042   31 DLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATLITNPSTLLPISLIFLIILTIGLVYEWVNG 110


                  ....*.
gi 2473932298 112 ALKWAN 117
Cdd:MTH00042  111 GLEWAE 116
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 16-116 1.88e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 92.29  E-value: 1.88e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932298  16 IVVMMIANILS----------KKMINDREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLIIPimLMFKSSM 85
Cdd:MTH00136    5 TTILTITIALSlilaivsfwlPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLP--LPWGDQL 82

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 2473932298  86 ISTLYtsTLFFITILLM----GLYHEWNQGALKWA 116
Cdd:MTH00136   83 PSPLL--TFFWATAVLIlltlGLIYEWLQGGLEWA 115
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 11-116 4.61e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 91.10  E-value: 4.61e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932298  11 AVLIPIVVMMIaNILSKKMINDREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLIIPIMLMFKSSMISTLY 90
Cdd:MTH00113   10 SLALSTILTTL-NFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAINLTTPTTTL 88

                          90       100
                  ....*....|....*....|....*.
gi 2473932298  91 TSTLFFITILLMGLYHEWNQGALKWA 116
Cdd:MTH00113   89 TWATIILTLLTLGLIYEWLQGGLEWA 114
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 11-115 1.65e-24

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 89.80  E-value: 1.65e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932298  11 AVLIPIVVMMIANILSKKMiNDREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLIIPIMLMFKSSMISTLY 90
Cdd:COG0838    15 ALGLALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWFGLI 93

                          90       100
                  ....*....|....*....|....*
gi 2473932298  91 tSTLFFITILLMGLYHEWNQGALKW 115
Cdd:COG0838    94 -EMLVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 11-115 4.28e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 86.10  E-value: 4.28e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932298  11 AVLIPIVVMMIAnILSKKMINDREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLIIPIMLMFKSSMISTLY 90
Cdd:MTH00203   11 ALLLSLILLFIA-FWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLSSLSLLL 89

                          90       100
                  ....*....|....*....|....*
gi 2473932298  91 TStlFFITILLMGLYHEWNQGALKW 115
Cdd:MTH00203   90 AF--LFLILLTLGLIYEWLQGGLEW 112
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 11-116 4.79e-23

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 86.07  E-value: 4.79e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932298  11 AVLIPIVVMMIANILSKKMiNDREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLIIPIMLMFKSSMISTLY 90
Cdd:PRK06602   18 AIGLGILLLVAGKLLGPRA-PDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSFREIGWLGFV 96

                          90       100
                  ....*....|....*....|....*.
gi 2473932298  91 tSTLFFITILLMGLYHEWNQGALKWA 116
Cdd:PRK06602   97 -EAMIFILVLLVGLVYLWRKGALDWE 121
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 16-116 9.04e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 85.43  E-value: 9.04e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932298  16 IVVMMIANILSKKMIN----------DREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLIIPImlMFKSSM 85
Cdd:MTH00069    3 MLMLLISTILSLILITisfwlplnnpDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPT--PWASQL 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 2473932298  86 ISTLYTSTLFFITILL--MGLYHEWNQGALKWA 116
Cdd:MTH00069   81 NTPTNTLFWSTLILILltLGLIYEWIQGGLEWA 113
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 32-115 1.80e-16

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 69.35  E-value: 1.80e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932298  32 DREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLIIPIMLMFKSSMISTLYTSTLFFItILLMGLYHEWNQG 111
Cdd:MTH00055   35 DSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGLFGFWVMYLFLI-ILTIGLIYEWVKG 113


                  ....
gi 2473932298 112 ALKW 115
Cdd:MTH00055  114 GLEW 117
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 11-115 1.86e-16

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 69.32  E-value: 1.86e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932298  11 AVLIPIVVMMIANILSKKmINDREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLIIPIMLMFKSSMISTLY 90
Cdd:MTH00018   10 SVVLSALFSGASYFLGVK-QPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQIAPFGFW 88

                          90       100
                  ....*....|....*....|....*
gi 2473932298  91 TSTLFFItILLMGLYHEWNQGALKW 115
Cdd:MTH00018   89 TMVGFLF-ILTLGLIYEWIKGGLEW 112
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 32-115 5.21e-14

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 63.03  E-value: 5.21e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932298  32 DREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLIIPIMLMFKSSMISTLYTSTLFFItILLMGLYHEWNQG 111
Cdd:MTH00030   40 DSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQLNLFSFWIVYTFLI-VLAIGLAYEWIKG 118


                  ....
gi 2473932298 112 ALKW 115
Cdd:MTH00030  119 GLEW 122
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
12-115 2.39e-10

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 53.59  E-value: 2.39e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932298  12 VLIPIVVMMIANILSKKMINDrEKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLIIPIMLMFKSSMISTLyT 91
Cdd:PRK07756   20 ILLPVVALTLGRMLRPNKPSA-AKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYDKLGLFAL-I 97

                          90       100
                  ....*....|....*....|....
gi 2473932298  92 STLFFITILLMGLYHEWNQGALKW 115
Cdd:PRK07756   98 EMLIFVVMLLVGLAYAWKKKVLQW 121
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 11-115 4.35e-10

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 52.75  E-value: 4.35e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932298  11 AVLIPIVVMMIANILSKKMINdREKSSPFECGFDPKSSARMP--FSLQFFMIAVIFLIFDVEIVLIIPIMLMFKSSMIST 88
Cdd:PRK07928   14 AAAFAVVSVVVASLVGPKRYN-RAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYPWAVSFDALGVFG 92

                          90       100
                  ....*....|....*....|....*..
gi 2473932298  89 LYTSTLFFITILLMGLYhEWNQGALKW 115
Cdd:PRK07928   93 LVEMALFMLTVFVAYAY-VWRRGGLEW 118
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
20-115 7.47e-10

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 52.36  E-value: 7.47e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932298  20 MIANILSKKMIN---DREKSSPFECGFDP-KSSARMpfSLQFFMIAVIFLIFDVEIVLIIPIMLMFKSSMISTLyTSTLF 95
Cdd:PRK08489   29 RLARFISRKLAQkntEKLKLAIYECGPEPvKQPNRI--SSHFYIMALLFILFDVEIVFMFPWAVDFKLLGLFGL-IEMLL 105

                          90       100
                  ....*....|....*....|
gi 2473932298  96 FITILLMGLYHEWNQGALKW 115
Cdd:PRK08489  106 FIVLLTIGFIYAWKKGALEW 125
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 13-115 6.75e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 39.11  E-value: 6.75e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932298  13 LIPIVVMMIANILSKKMINDREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLIIPIMLMFKSSMIstlytS 92
Cdd:MTH00092   12 LLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVSDFSSLI-----S 86

                          90       100
                  ....*....|....*....|...
gi 2473932298  93 TLFFITILLMGLYHEWNQGALKW 115
Cdd:MTH00092   87 FFMLMIFIFFGFYMEWWYGKLIW 109
PRK06432 PRK06432
NADH dehydrogenase subunit A; Validated
 32-115 8.22e-05

NADH dehydrogenase subunit A; Validated


Pssm-ID: 102372  Cd Length: 144  Bit Score: 39.41  E-value: 8.22e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932298  32 DREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLIIPIMLMFKSSMISTlYTSTLFFITILLMGLYHEWNQG 111
Cdd:PRK06432   60 DQSYLEPYESGEVAREIWGGPSINQYYIVVLLFVVFDVDMLLLFPWAFDFKRLGLIP-FIETLIFLAMPLFAVYYAFKMG 138


                  ....
gi 2473932298 112 ALKW 115
Cdd:PRK06432  139 YMRW 142
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 30-117 1.54e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 38.34  E-value: 1.54e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932298  30 INDREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLIIPIM---LMFKSsmistlYTSTLFFITILLMGLYH 106
Cdd:MTH00060   32 SGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMPfqgLLFYN------FWYYYFFLLLLFLGFVV 105

                          90
                  ....*....|.
gi 2473932298 107 EWNQGALKWAN 117
Cdd:MTH00060  106 ELFSGYVRWVY 116
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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