|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-444 |
1.21e-140 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 409.93 E-value: 1.21e-140
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 1 MLKLMIMLFMLMPLCLINKIWWVVHSLFMMMCFFFMFHSYSIFNYGFISYFMGMDLFSYMFIMLSLWICSLMVTSSSNIY 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 81 FSFYYNNLFLFLIMFLLLMLYLSFSSMNLFSFYVFFESSLIPTLFLILGWGYQPERMQAGIYLIFYTLFASLPLLLVLFS 160
Cdd:MTH00163 81 KKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 161 VYYSINTLYFPLLVFNINIHFLFYLFSIMAFLVKMPMFMVHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRMMKFIML 240
Cdd:MTH00163 161 LYNNSGSLSFFLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 241 FSHIYNYFVIILSLMGGMIVSIFCLRQIDLKSLIAYSSVVHMSMVICGLLIMNWWGVLGSLILMLGHGLCSSGLFCLANI 320
Cdd:MTH00163 241 LGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 321 IYERSGSRMLLFNKGMMNFMPMMCLWWFLLSSSNMAAPPSINLLGEIMLLNSIMSWSWLMIIILVFLSFFSAMYTLYMYS 400
Cdd:MTH00163 321 IYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYS 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 2473932290 401 YSQHGIYYSGLYSFSLGYFREYHLLLLHWLPLNILFMKGNMLMM 444
Cdd:MTH00163 401 YSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFML 444
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
41-444 |
6.01e-108 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 325.26 E-value: 6.01e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 41 SIFNYGFISYFMGMDLFSYMFIMLSLWICSLMVTSSSNIYFSFYYNNLFLFLIMFLLLMLYLSFSSMNLFSFYVFFESSL 120
Cdd:MTH00150 9 SFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 121 IPTLFLILGWGYQPERMQAGIYLIFYTLFASLPLLLVLFSVYYSINTlYFPLLVFNINIHF----LFYLFSIMAFLVKMP 196
Cdd:MTH00150 89 IPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGS-SFMLLISSLRKLLssmgLWGLLVFLAFLVKLP 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 197 MFMVHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRMMKFIMLFSHIYNYFVIILSLMGGMIVSIFCLRQIDLKSLIAY 276
Cdd:MTH00150 168 MYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAY 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 277 SSVVHMSMVICGLLIMNWWGVLGSLILMLGHGLCSSGLFCLANIIYERSGSRMLLFNKGMMNFMPMMCLWWFLLSSSNMA 356
Cdd:MTH00150 248 SSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMA 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 357 APPSINLLGEIMLLNSIMSWSWLMIIILVFLSFFSAMYTLYMYSYSQHGIYYSGLYSFSLGYFREYHLLLLHWLPLNILF 436
Cdd:MTH00150 328 APPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLI 407
|
....*...
gi 2473932290 437 MKGNMLMM 444
Cdd:MTH00150 408 LKSDLLFM 415
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-405 |
4.03e-104 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 316.75 E-value: 4.03e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 1 MLKLMIMLFMLMPLCLI--NKIWW---VVHSLFMMMCFFFMFHSySIFNYGFISYFMGMDLFSYMFIMLSLWICSLMVTS 75
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLskPKFLWtntTTYSLLIALLSLQWLKP-PYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 76 SSNIYFSFYYNNLFLFLIMFLLLMLYLSFSSM--NLFSFYVFFESSLIPTLFLILGWGYQPERMQAGIYLIFYTLFASLP 153
Cdd:MTH00124 80 SQNHLQHEPLQRKRTFLTTLILLQTFLILAFSatELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 154 LLLVLFSVYYSINTLYFPLL------VFNINIHFLFYLFSIMAFLVKMPMFMVHLWLPKAHVEAPISGSMILAGVLLKLG 227
Cdd:MTH00124 160 LLIAILYLHNQTGTLSLPMLqlthptLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 228 GYGLIRMMKFIMLFSHIYNYFVIILSLMGGMIVSIFCLRQIDLKSLIAYSSVVHMSMVICGLLIMNWWGVLGSLILMLGH 307
Cdd:MTH00124 240 GYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 308 GLCSSGLFCLANIIYERSGSRMLLFNKGMMNFMPMMCLWWFLLSSSNMAAPPSINLLGEIMLLNSIMSWSWLMIIILVFL 387
Cdd:MTH00124 320 GLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLA 399
|
410
....*....|....*...
gi 2473932290 388 SFFSAMYTLYMYSYSQHG 405
Cdd:MTH00124 400 TLITASYTLYMFLSTQRG 417
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-442 |
5.56e-104 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 316.30 E-value: 5.56e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 1 MLKLMIMLFMLMPLCLINKIWWVVHS---LFMMMCFFFMFHSYSIFNYGFISYFMGMDLFSYMFIMLSLWICSLMVTSSS 77
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPWSWALTfstLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 78 NIYFSFYYNNLFLFLIMFLLLMLYLSFSSMNLFSFYVFFESSLIPTLFLILGWGYQPERMQAGIYLIFYTLFASLPLLLV 157
Cdd:MTH00014 81 KIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 158 LFSVYYSINTLYFPLLVFNINIHF---LFYLFSIMAFLVKMPMFMVHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRM 234
Cdd:MTH00014 161 ILLIFYTNNSLSMLMSSMEPPSIYlmnLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 235 MKFIMLFSHIYNYFVIILSLMGGMIVSIFCLRQIDLKSLIAYSSVVHMSMVICGLLIMNWWGVLGSLILMLGHGLCSSGL 314
Cdd:MTH00014 241 SSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSAL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 315 FCLANIIYERSGSRMLLFNKGMMNFMPMMCLWWFLLSSSNMAAPPSINLLGEIMLLNSIMSWSWLMIIILVFLSFFSAMY 394
Cdd:MTH00014 321 FALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAY 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 2473932290 395 TLYMYSYSQHGIYYSGLYSFSLGYFREYHLLLLHWLPLNILFMKGNML 442
Cdd:MTH00014 401 SLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLI 448
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
1-443 |
1.88e-102 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 312.30 E-value: 1.88e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 1 MLKLMIMLFMLMPLCLINKIW-WVVHSLFMMMCFFFMFHSYSIFNYGFISYFMGMDLFSYMFIMLSLWICSLMVTSSSNI 79
Cdd:MTH00205 1 MSIFGVFSLLIILFVLKFKDWsFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 80 YFSFYYNNLFLFLIMFLLLMLYLSFSSMNLFSFYVFFESSLIPTLFLILGWGYQPERMQAGIYLIFYTLFASLPLLLVLF 159
Cdd:MTH00205 81 FKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 160 SVYYSINTLYFPLLV---FNINIHFLFYLFSIMAFLVKMPMFMVHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRMMK 236
Cdd:MTH00205 161 FLNSLNFSLSMFFNFplnFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 237 FIMLFSHIYNYFVIILSLMGGMIVSIFCLRQIDLKSLIAYSSVVHMSMVICGLLIMNWWGVLGSLILMLGHGLCSSGLFC 316
Cdd:MTH00205 241 MLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 317 LANIIYERSGSRMLLFNKGMMNFMPMMCLWWFLLSSSNMAAPPSINLLGEIMLLNSIMSWSWLMIIILVFLSFFSAMYTL 396
Cdd:MTH00205 321 LANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSL 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 2473932290 397 YMYSYSQHGIYYSGLYSFSLGYFREYHLLLLHWLPLNILFMKGNMLM 443
Cdd:MTH00205 401 YLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIFI 447
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
8-422 |
1.98e-97 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 299.97 E-value: 1.98e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 8 LFMLMPLCLINKIWWVVHS----LFMMMCFFFMFHSYSIFNygFISYFMGMDLFSYMFIMLSLWICSLMVTSSSNI--YF 81
Cdd:MTH00044 11 IAITSWIVPKNKLWPISISqsslISLLSLFLLNNHWSSSWH--NLSLSLATDSLSSPLIILSCWLAPLSLLASINHlsNN 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 82 SFYYNNLFLFLIMFLLLMLYLSFSSMNLFSFYVFFESSLIPTLFLILGWGYQPERMQAGIYLIFYTLFASLPLLLVLFSV 161
Cdd:MTH00044 89 SPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAI 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 162 YYSINTLYFPL------LVFNINIHFLFYLFSIMAFLVKMPMFMVHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRMM 235
Cdd:MTH00044 169 YSSSSSLSIPLselnwlTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLI 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 236 K-FIMLFSHIYNYFVIILSLMGGMIVSIFCLRQIDLKSLIAYSSVVHMSMVICGLLIMNWWGVLGSLILMLGHGLCSSGL 314
Cdd:MTH00044 249 NlFSLPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSAL 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 315 FCLANIIYERSGSRMLLFNKGMMNFMPMMCLWWFLLSSSNMAAPPSINLLGEIMLLNSIMSWSWLMIIILVFLSFFSAMY 394
Cdd:MTH00044 329 FCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGLATVFGAIY 408
|
410 420
....*....|....*....|....*...
gi 2473932290 395 TLYMYSYSQHGIYYSGLYSFSLGYFREY 422
Cdd:MTH00044 409 SLLIYQLTNSGSFPSWISNVSPISSREH 436
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-421 |
1.47e-93 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 289.89 E-value: 1.47e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 1 MLKLMIMLFMLMPLCLINKIWWV-----VHSLFMMMCFFFMFHSYSIFNYgFISYFMGMDLFSYMFIMLSLWICSLMVTS 75
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLwtlttTNSLIIAFLSLMWFNLPSETMN-FTNKYFGIDQISSPLLILTCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 76 SSN--IYFSFYYNNLFLFLIMFLLLMLYLSFSSMNLFSFYVFFESSLIPTLFLILGWGYQPERMQAGIYLIFYTLFASLP 153
Cdd:MTH00068 80 SQNhlKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 154 LLLVLFSVYYSINTLYFPLLVFNINIHF------LFYLFSIMAFLVKMPMFMVHLWLPKAHVEAPISGSMILAGVLLKLG 227
Cdd:MTH00068 160 LLIALLILQNSLGSLSLILLELMSPMQLmtytnkIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 228 GYGLIRMMKFIMLFSHIYNYFVIILSLMGGMIVSIFCLRQIDLKSLIAYSSVVHMSMVICGLLIMNWWGVLGSLILMLGH 307
Cdd:MTH00068 240 GYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 308 GLCSSGLFCLANIIYERSGSRMLLFNKGMMNFMPMMCLWWFLLSSSNMAAPPSINLLGEIMLLNSIMSWSWLMIIILVFL 387
Cdd:MTH00068 320 GLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLG 399
|
410 420 430
....*....|....*....|....*....|....
gi 2473932290 388 SFFSAMYTLYMYSYSQHGIYYSGLYSFSLGYFRE 421
Cdd:MTH00068 400 TLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTRE 433
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-421 |
1.59e-92 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 287.17 E-value: 1.59e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 1 MLKLMIMLFMLMPLCLINKIWWV-----VHSLFMMMCFFFMFHSYSIFNYGFISYFMgMDLFSYMFIMLSLWICSLMVTS 75
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIwinttTYSLLISLISLLLLNQPNDNSLNFSLLFF-SDSLSTPLLILTTWLLPLMLMA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 76 SSN--IYFSFYYNNLFLFLIMFLLLMLYLSFSSMNLFSFYVFFESSLIPTLFLILGWGYQPERMQAGIYLIFYTLFASLP 153
Cdd:MTH00110 80 SQHhlSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 154 LLLVLFSVYYSINTLYFPLLVFNINI------HFLFYLFSIMAFLVKMPMFMVHLWLPKAHVEAPISGSMILAGVLLKLG 227
Cdd:MTH00110 160 LLVALLYIQNNLGSLNFLLLQLWAQPlpnswsNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 228 GYGLIRMMKFIMLFSHIYNYFVIILSLMGGMIVSIFCLRQIDLKSLIAYSSVVHMSMVICGLLIMNWWGVLGSLILMLGH 307
Cdd:MTH00110 240 GYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 308 GLCSSGLFCLANIIYERSGSRMLLFNKGMMNFMPMMCLWWFLLSSSNMAAPPSINLLGEIMLLNSIMSWSWLMIIILVFL 387
Cdd:MTH00110 320 GLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLN 399
|
410 420 430
....*....|....*....|....*....|....
gi 2473932290 388 SFFSAMYTLYMYSYSQHGIYYSGLYSFSLGYFRE 421
Cdd:MTH00110 400 MLITALYSLYMLITTQRGKLTHHINNIKPSFTRE 433
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-442 |
9.79e-89 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 277.21 E-value: 9.79e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 3 KLMIMLFMLMPLCLINKIWWV-----VHSLFMMMCFFFMFHSYSIFNYGFISYFMGMDLFSYMFIMLSLWICSLMVTSSS 77
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLwrsttFFSFLIALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 78 NIYF--SFYYNNLFLFLIMFLLLMLYLSFSSMNLFSFYVFFESSLIPTLFLILGWGYQPERMQAGIYLIFYTLFASLPLL 155
Cdd:MTH00206 81 NHMKnePINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 156 LVLFSVYYSINTLYFPLLVFN---INIHFLFYLFSIMAFLVKMPMFMVHLWLPKAHVEAPISGSMILAGVLLKLGGYGLI 232
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSkltTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 233 RMMKFIMLFSHIYNYFVIILSLMGGMIVSIFCLRQIDLKSLIAYSSVVHMSMVICGLLIMNWWGVLGSLILMLGHGLCSS 312
Cdd:MTH00206 241 RIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 313 GLFCLANIIYERSGSRMLLFNKGMMNFMPMMCLWWFLLSSSNMAAPPSINLLGEIMLLNSIMSWSWLMIIILVFLSFFSA 392
Cdd:MTH00206 321 ALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTA 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 2473932290 393 MYTLYMYSYSQHGIYYSGLYSFSLGYFREYHLLLLHWLPLNILFMKGNML 442
Cdd:MTH00206 401 IYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-421 |
5.44e-86 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 270.29 E-value: 5.44e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 1 MLKLMIMLFMLMPLCLINKIWW-----VVHSLFMMMCFFFMFHSYSIFNYGFISYFMGMDLFSYMFIMLSLWICSLMVTS 75
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWlwtttLAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 76 SSNIYFSFYYNN--LFLFLIMFLLLMLYLSFSSMNLFSFYVFFESSLIPTLFLILGWGYQPERMQAGIYLIFYTLFASLP 153
Cdd:MTH00127 81 SQNHTAPEPINRqrMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 154 LLLVLFSVYYSINTLYFPLLVFNINIHFLFYLFSI------MAFLVKMPMFMVHLWLPKAHVEAPISGSMILAGVLLKLG 227
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLwwagclLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 228 GYGLIRMMKFIMLFSHIYNYFVIILSLMGGMIVSIFCLRQIDLKSLIAYSSVVHMSMVICGLLIMNWWGVLGSLILMLGH 307
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 308 GLCSSGLFCLANIIYERSGSRMLLFNKGMMNFMPMMCLWWFLLSSSNMAAPPSINLLGEIMLLNSIMSWSWLMIIILVFL 387
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430
....*....|....*....|....*....|....
gi 2473932290 388 SFFSAMYTLYMYSYSQHGIYYSGLYSFSLGYFRE 421
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTRE 434
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
107-399 |
1.62e-59 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 201.85 E-value: 1.62e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 107 MNLFSFYVFFESSLIPTLFLILGWGYqPERMQAGIYLIFYTLFASLPLLLVLFSVYYSINTLYFPLLV-----FNINIHF 181
Cdd:COG1008 131 LDLFLFYVFWELMLIPMYFLIGIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAElaaapLPLTAQL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 182 LFYLFSIMAFLVKMPMFMVHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRMMkfIMLF---SHIYNYFVIILSLMGGM 258
Cdd:COG1008 210 LLFLAFFIAFAVKVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFA--LPLFpeaSAYFAPLLAALGVIGII 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 259 IVSIFCLRQIDLKSLIAYSSVVHMSMVICGLLIMNWWGVLGSLILMLGHGLCSSGLFCLANIIYERSGSRMLLFNKGMMN 338
Cdd:COG1008 288 YGALVALAQTDLKRLIAYSSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAK 367
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2473932290 339 FMPMMCLWWFLLSSSNMAAPPSINLLGEIMLLNSIMSWSWLMIIILVFLSFFSAMYTLYMY 399
Cdd:COG1008 368 RMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
107-388 |
2.33e-55 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 185.59 E-value: 2.33e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 107 MNLFSFYVFFESSLIPTLFLILGWGYQPERMQAGIYLIFYTLFASLPLLLVLFSVYYSINTLYFPLLV------FNINIH 180
Cdd:pfam00361 2 NDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSkaltggLNSSGL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 181 FLFYLFSIMAFLVKMPMFMVHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRMMKFIMLFSHIYNYFVIILSLMGGMIV 260
Cdd:pfam00361 82 LLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLLG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 261 SIFCLRQIDLKSLIAYSSVVHMSMVICGLLIMNWWGVLGSLILMLGHGLCSSGLFCLA-NIIYERSGSRMLLFNKGMMNF 339
Cdd:pfam00361 162 SLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAKT 241
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 2473932290 340 MPMMCLWWFLLSSSNMAAPPSINLLGEIMLLNSIMSWSWLMIIILVFLS 388
Cdd:pfam00361 242 MPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
48-399 |
2.62e-53 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 185.79 E-value: 2.62e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 48 ISYFMGMDLFSYMFIMLSLWICSLMVTSSSNIyfSFYYNNLFLFLIMFLLLMLYLSFSSMNLFSFYVFFESSLIPTLFLI 127
Cdd:PRK05846 74 ISYHLGVDGISLLLVVLTALLTPLAVLASWEE--IKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 128 LGWGYqPERMQAGIYLIFYTLFASLPLLLVLFSVYYSI-----NTLYFPLLVFNINIH---FLFYLFSImAFLVKMPMFM 199
Cdd:PRK05846 152 GVWGG-KNRIYAATKFFLYTLLGSLLMLVAIIYLVVVYynatgTFDIADLLNLPLPPGvqyWLFLAFFI-AFAVKMPMFP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 200 VHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRMMKFIM-LFSHIYNYFVIILSLMGGMIVSIFCLRQIDLKSLIAYSS 278
Cdd:PRK05846 230 LHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFpDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 279 VVHMSMVICGLLIMNWWGVLGSLILMLGHGLCSSGLFCLANIIYERSGSRMLLFNKGMMNFMPMMCLWWFLLSSSNMAAP 358
Cdd:PRK05846 310 ISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLP 389
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 2473932290 359 PSINLLGEIMLLNSIMSWSWLMIIILVFLSFFSAMYTLYMY 399
Cdd:PRK05846 390 GTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLY 430
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
107-399 |
4.65e-53 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 184.88 E-value: 4.65e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 107 MNLFSFYVFFESSLIPTLFLILGWGYQPERMQAGIYLIFYTLFASLPLLLVLFSVYYSINTL-YFPLLVFNINIHFLFYL 185
Cdd:MTH00204 132 LDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTdYQILLNIKLPLSIQKWL 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 186 FS--IMAFLVKMPMFMVHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRMMKFIM-LFSHIYNYFVIILSLMGGMIVSI 262
Cdd:MTH00204 212 LVgfFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFpAASEYFAPLIVMLSVIAVIYGSL 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 263 FCLRQIDLKSLIAYSSVVHMSMVICGLLIMNWWGVLGSLILMLGHGLCSSGLFCLANIIYERSGSRMLLFNKGMMNFMPM 342
Cdd:MTH00204 292 TTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPL 371
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 2473932290 343 MCLWWFLLSSSNMAAPPSINLLGEIMLLNSIMSWSWLMIIILVFLSFFSAMYTLYMY 399
Cdd:MTH00204 372 FVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
107-399 |
6.60e-51 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 179.09 E-value: 6.60e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 107 MNLFSFYVFFESSLIPTLFLILGWGYQPERMQAGIYLIFYTLFASLPLLLVLFSVY-YSINTLYFPL--LVFNINIHFLF 183
Cdd:MTH00217 129 LDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYsYAGTTDYQALccLKIEKELQYFI 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 184 YLFSIMAFLVKMPMFMVHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRM-MKFIMLFSHIYNYFVIILSLMGGMIVSI 262
Cdd:MTH00217 209 FLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFsWPLLPEASEYFSPLIQTLSLLAIIYGSL 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 263 FCLRQIDLKSLIAYSSVVHMSMVICGLLIMNWWGVLGSLILMLGHGLCSSGLFCLANIIYERSGSRMLLFNKGMMNFMPM 342
Cdd:MTH00217 289 TTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPL 368
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 2473932290 343 MCLWWFLLSSSNMAAPPSINLLGEIMLLNSIMSWSWLMIIILVFLSFFSAMYTLYMY 399
Cdd:MTH00217 369 FGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
48-399 |
2.01e-48 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 172.43 E-value: 2.01e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 48 ISYFMGMDLFSYMFIMLS---LWICSLMVTSSSNIYFSFYYnnlflFLIMFLLLMLYLSFSSMNLFSFYVFFESSLIPTL 124
Cdd:TIGR01972 69 ISYHLGVDGISLLLVLLTallTLLAILASWESIQKRVKEFY-----ALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMY 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 125 FLILGWGyQPERMQAGIYLIFYTLFASLPLLLVLFSVYYSI--NTLYFPLLVFNINI---HFLFYLFSImAFLVKMPMFM 199
Cdd:TIGR01972 144 LLIGVWG-GPNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGggTFDLLELLNLPLPFgvqTWLFLAFFI-AFAVKVPLFP 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 200 VHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRMMkfIMLFSHIYNYF---VIILSLMGGMIVSIFCLRQIDLKSLIAY 276
Cdd:TIGR01972 222 LHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFN--LPLFPDASLYFapvLAALGVIAIIYGALIALAQTDIKRLIAY 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 277 SSVVHMSMVICGLLIMNWWGVLGSLILMLGHGLCSSGLFCLANIIYERSGSRMLLFNKGMMNFMPMMCLWWFLLSSSNMA 356
Cdd:TIGR01972 300 SSISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLG 379
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 2473932290 357 APPSINLLGEIMLLNSIMSWSWLMIIILVFLSFFSAMYTLYMY 399
Cdd:TIGR01972 380 LPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
107-419 |
7.43e-47 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 166.24 E-value: 7.43e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 107 MNLFSFYVFFESSLIPTLFLILGWGYQPERMQAGIYLIFYTLFASLPLLLVLFSVYYSINTLYFpllvfNINIHFLFYLF 186
Cdd:MTH00094 82 SNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFFFSLCYF-----DFFLSWEMFFI 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 187 SIMAFLVKMPMFMVHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRMMKFimlFSHIYNYFVIILSLMGGMIVSIFCLR 266
Cdd:MTH00094 157 LSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGS---LNFVYNNFWIIFSLLGMILSSFCCVF 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 267 QIDLKSLIAYSSVVHMSMVICGLLIMNWWGVLGSLILMLGHGLCSSGLFCLANIIYERSGSRMLLFNKGMMNFMPMMCLW 346
Cdd:MTH00094 234 QSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGLI 313
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2473932290 347 WFLLSSSNMAAPPSINLLGEIMLLNSIMSWSWLMIIILVFLSFFSAMYTLYMYSYSQHGIYYSGLYSFSLGYF 419
Cdd:MTH00094 314 FSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVGLS 386
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
107-397 |
1.01e-45 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 165.48 E-value: 1.01e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 107 MNLFSFYVFFESSLIPtLFLILG-WGYQPERMQAGIYLIFYTLFASLPLLLVLFSVYYSINTLYFPLL-----VFNINIH 180
Cdd:MTH00226 151 LDIFMFYILFEGVLIP-MYLILGiWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLascshVVSEQTQ 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 181 FLFYLFSIMAFLVKMPMFMVHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRMMKFIM-LFSHIYNYFVIILSLMGGMI 259
Cdd:MTH00226 230 KWIFLGIFLAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILpLGAQNLAPAVIAMGIVGIVY 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 260 VSIFCLRQIDLKSLIAYSSVVHMSMVICGLLIMNWWGVLGSLILMLGHGLCSSGLFCLANIIYERSGSRMLLFNKGMMNF 339
Cdd:MTH00226 310 GSFATCRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSIT 389
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 2473932290 340 MPMMCLWWFLLSSSNMAAPPSINLLGEIMLLNSIMSWSWLMIIILVFLSFFSAMYTLY 397
Cdd:MTH00226 390 MPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
108-403 |
3.16e-35 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 135.27 E-value: 3.16e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 108 NLFSFYVFFESSLIPTLFLILGWGYqPERMQAGIYLIFYTLFASLPLLLVLFSVYYSINTLYFPLLVFNI-----NIHFL 182
Cdd:COG0651 128 DLFNLFVFFEVMLLASYGLVALGGT-KEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLaeldpGLLLA 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 183 FYLFSIMAFLVKMPMFMVHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRMMK--FIMLFSHIYNYFVIILSLMGGMIV 260
Cdd:COG0651 207 AFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTllFGADPALFLGTLLLVLGLLTMLVG 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 261 SIFCLRQIDLKSLIAYSSVVHMSMVICGLLIMNWWGVLGSLILMLGHGLCSSGLFCLANIIYERSGSRMLLFNKGMMNFM 340
Cdd:COG0651 287 ALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRM 366
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2473932290 341 PMMCLWWFLLSSSNMAAPPSINLLGEIMLLNSIM-SWSWLMIIILVFLSFFSAMYTLYMYSYSQ 403
Cdd:COG0651 367 PLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALeAGAWLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
108-341 |
6.46e-31 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 124.37 E-value: 6.46e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 108 NLFSFYVFFESSLIPTLFLILGWGYQpERMQAGIYLIFYTLFASLPLLLVLFSVYYSINTLYFPLLV-----FNINIHFL 182
Cdd:PRK12561 108 DLLLFFLMWELELVPVYLLISIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAElgaksYPLALELL 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 183 FYLFSIMAFLVKMPMFMVHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRMMkfIMLFSHIYNYFVIILSLMGgmIVSI 262
Cdd:PRK12561 187 LYAGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFN--VQMLPDAHVYFAPALAILG--VVNI 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 263 F-----CLRQIDLKSLIAYSSVVHMSMVICGLLIMNWWGVLGSLILMLGHGLCSSGLFCLANIIYERSGSRMLLFNKGMM 337
Cdd:PRK12561 263 IygalnAFAQDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLA 342
|
....
gi 2473932290 338 NFMP 341
Cdd:PRK12561 343 KVMP 346
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
112-369 |
2.05e-26 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 111.34 E-value: 2.05e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 112 FYVFFESSLIPTLFLILGWGYQpERMQAGIYLIFYTLFASLPLLLVLFSVYYSINTLYFPLLV-----FNINIHFLFYLF 186
Cdd:PRK02546 140 FFLAWELELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTAlaakdFGLGFQLLCYAG 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 187 SIMAFLVKMPMFMVHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRMMKFIMLFSHIY-NYFVIILSLMGGMIVSIFCL 265
Cdd:PRK02546 219 LLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQfAPLLIVLGVVNIIYAALTSF 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 266 RQIDLKSLIAYSSVVHMSMVICGLLIMNWWGVLGSLILMLGHGLCSSGLFCLANIIYERSGSRMLLFNKGMMNFMPMMCL 345
Cdd:PRK02546 299 AQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFA 378
|
250 260
....*....|....*....|....
gi 2473932290 346 WWFLLSSSNMAAPPSINLLGEIML 369
Cdd:PRK02546 379 MWTACSLASLALPGMSGFVAELMV 402
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
108-358 |
3.70e-24 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 104.64 E-value: 3.70e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 108 NLFSFYVFFESSLIPTLFLILGWGYQpERMQAGIYLIFYTLFASLPLLL-VLFSVYYSIN--TLYFPLLV---FNINIHF 181
Cdd:CHL00011 133 DLLLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIgVLGMGLYGSNepTLNFETLAnqsYPVALEI 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 182 LFYLFSIMAFLVKMPMFMVHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRMMkfIMLFSHIYNYFVIILSLMGGMIV- 260
Cdd:CHL00011 212 LFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRIN--MELLPHAHSIFSPWLVIVGAIQIi 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 261 --SIFCLRQIDLKSLIAYSSVVHMSMVICGLLIMNWWGVLGSLILMLGHGLCSSGLFCLANIIYERSGSRMLLFNKGMMN 338
Cdd:CHL00011 290 yaASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAI 369
|
250 260
....*....|....*....|
gi 2473932290 339 FMPMMCLWWFLLSSSNMAAP 358
Cdd:CHL00011 370 PMPKIFTMFSSFSMASLALP 389
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
108-338 |
6.07e-24 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 104.01 E-value: 6.07e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 108 NLFSFYVFFESSLIPTLFLILGWGYQpERMQAGIYLIFYTLFASLPLLLVLFSVYY---SINTLYFPLLVFNINI--HFL 182
Cdd:PRK06473 128 DLLLFFLFYELELIPLYLLIAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWlsgASSFDYEPLRSHTLPLstQLL 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 183 FYLFSIMAFLVKMPMFMVHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRMMkfIMLFSHIYNYFVIILSLMGGMIV-- 260
Cdd:PRK06473 207 LLAPILVGFGIKIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFG--VGLFPEAWVYLAPWLATWAVVSVly 284
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2473932290 261 -SIFCLRQIDLKSLIAYSSVVHMSMVICGLLIMNWWGVLGSLILMLGHGLCSSGLFCLANIIYERSGSRMLLFNKGMMN 338
Cdd:PRK06473 285 gASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLN 363
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-401 |
1.00e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 103.42 E-value: 1.00e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 108 NLFSFYVFFESSLIPTLFLIlGWGYQPERMQAGIYLIFYTLFASLPLLLVLFSVYYSINTLYFPLL----VFNINIHFLF 183
Cdd:PRK08375 127 DLFNLFVFLEIMSLSSYALV-AMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLagalAENPTVVTAF 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 184 YLFSImAFLVKMPMFMVHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRMM----KFIMLFSHIYNYFVIILSLMGGMI 259
Cdd:PRK08375 206 GFVLL-ALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfGGDFRFALGLGWLLAVLALLSMLV 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 260 VSIFCLRQIDLKSLIAYSSVVHMSMVICGLLIMNWWGVLGSLILMLGHGLCSSGLFCLANIIYERSGSRMLLFNKGMMNF 339
Cdd:PRK08375 285 GSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRR 364
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2473932290 340 MPMMCLWWFLLSSSNMAAPPSINLLGEIMLLNSIMS-WSWLMIIILVFLSFFSAMYTLYMYSY 401
Cdd:PRK08375 365 MPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLYFLRIWYR 427
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
20-389 |
5.51e-20 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 91.52 E-value: 5.51e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 20 IWWVVHSLFMMMCFFFMFHSYSIFNYGFISYFMGMDLFSYMFIMLSlwICSLMVTSSSNIYFSFYYNNLFLFLIMFLLLM 99
Cdd:MTH00062 6 VGFFLGFLLLLLFCLLYSSGVGCCILVVNNVFNGLFIFDSLSFYLI--LLVLFLGLYSQVMFYNLLSGVSRFFLFLSLIF 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 100 LYLSFSSMNLFSFYVFFESSLIPTLFLILGWGYQPERMQAGIYLIFYTLFASLPLLLVLFSVYYSINTLYFPLLVFNINI 179
Cdd:MTH00062 84 SILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSDDSV 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 180 HFLFYLFSIMAFLVKMPMFMVHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRMMKFImlfSHIYNYFVIILSLMGGMI 259
Cdd:MTH00062 164 SLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFI---FSGSFLGYLFLCCLFSVF 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 260 VSIFCLRQIDLKSLIAYSSVVHMSMVICGLLIMNWWGVLGSLILMLGHGLCSSGLFCLANIIYERSGSRMLLFNKGMMNF 339
Cdd:MTH00062 241 FLITACSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGING 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 2473932290 340 MPMMCLWWFLLSSSNMAAPPSINLLGEIMLLNSIMSWSWLMIIILVFLSF 389
Cdd:MTH00062 321 SLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYLLFWCFYLFF 370
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
108-357 |
8.69e-20 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 91.70 E-value: 8.69e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 108 NLFSFYVFFESSLIPTLFLILGWGYQpERMQAGIYLIFYTLFASLPLLLVLFSV----------YYSINTLYFPLlvfni 177
Cdd:PRK07363 128 NLLLFFLFYELELIPFYLLIAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIvwlsgstsfdYDAISTQNLSL----- 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 178 NIHFLFYLFSIMAFLVKMPMFMVHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRMMkfIMLFSHIYNYFVIILSLMGG 257
Cdd:PRK07363 202 NTQLILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFG--LQLFPQTWSLVAPGLAIIGT 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 258 MIV---SIFCLRQIDLKSLIAYSSVVHMSMVICGLLIMNWWGVLGSLILMLGHGLCSSGLFCLANIIYERSGSRMLLFNK 334
Cdd:PRK07363 280 ISViygALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLN 359
|
250 260
....*....|....*....|...
gi 2473932290 335 GMMNFMPMMCLWWFLLSSSNMAA 357
Cdd:PRK07363 360 GLMNPIRGLPLTSALLVLAGMAS 382
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-394 |
1.99e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 90.42 E-value: 1.99e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 109 LFSFYVFFESSLIPTLFLILGWGYQPERMQAGIYLIFYTLFASLPLLLVLFSVYYSINTLYFPLL--------------- 173
Cdd:PRK12667 135 AFNLFVMLEVLSISAYGLVAYYRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLsakirglsfpltggl 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 174 VFNINIH-FLFYLFSIMAFLVKMPMFMVHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRMMKFI-------MLFSHIY 245
Cdd:PRK12667 215 AGNPPLAlGVALALALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIfgispslIDFRAAL 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 246 NYFVIILSLMGGMIVSIFCLRQIDLKSLIAYSSVVHMSMVICGLLIMNWWGVLGSLILMLGHGLCSSGLFCLANIIYERS 325
Cdd:PRK12667 295 SPILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAA 374
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 326 GSRMLLFNKGMMNFMPMMCLWWFLLSSSNMAAPPSINLLGEIMLLNSIMSWS-WLMIIILVFLSFFSAMY 394
Cdd:PRK12667 375 GTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGfYLPALVLLIASAISLVG 444
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
186-387 |
3.12e-18 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 86.91 E-value: 3.12e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 186 FSIMAFLVKMPMFMVHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRMmkFIMLFSHIYNYFV----IILSLMGGMIVS 261
Cdd:PRK06458 219 FLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRY--YILIDAAIGSDFPgrllLIFGLLSVLVAA 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 262 IFCLRQIDLKSLIAYSSVVHMSMVICGLLIMNWWGVLGSLILMLGHGLCSSGLFCLANIIYERSGSRMLLFNKGMMNFMP 341
Cdd:PRK06458 297 FFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSP 376
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 2473932290 342 MMClWWFLLSSSNMA-APPSINLLGEIMLLNSIMSWS--WLMIIILVFL 387
Cdd:PRK06458 377 LTG-WGLMLGALAIAgMPPFGVFISEFLILTAGLARGplLIAILLLLLL 424
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
108-391 |
5.37e-16 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 80.16 E-value: 5.37e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 108 NLFSFYVFFESSLIPTLFLILGWGYQPERMQAGIYLIFYTLFASLPLLLVLFSVYYSINTLYFPLLVFNINIHFLFYLFS 187
Cdd:PRK08667 132 NTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLVFLLL 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 188 IMAFLVKMPMFMVHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRMMKFIMLFSHIYNYFVIILSLMGGMIVSIFCLRQ 267
Cdd:PRK08667 212 FLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKE 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 268 IDLKSLIAYSSVVHMSMVICGLLIMNWWGVLGSLILML-----------GHGLCSSGLFCLANIIYERSGSRMLLFNKGM 336
Cdd:PRK08667 292 HDLKGLLAYSSIENIGIILMGIGLYVIFGVYGLDTLALlalggalfhslNHALFKSLLFLTAGSVVHATGTRNIEKMGGL 371
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 337 MNFMPMMCLWWFLLSSSNMAAPPSINLLGEIMLLNSI-----MSWSWLMIIILVFLSFFS 391
Cdd:PRK08667 372 VKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFfqsfsVADPLIKILLFSVLAIFA 431
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
181-387 |
1.60e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 72.09 E-value: 1.60e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 181 FLFYLFSIMAFLVKMPMFMVHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRMMKfIMLFSHIYNYFVIILSLMGGMIV 260
Cdd:PRK08676 206 GASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSA-LLRQSGAAEQFSNVLIGLGIFSI 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 261 SIFC---LRQIDLKSLIAYSSVVHMSMVICGLLIMNWWGVLGSLILMLGHGLCSSGLFCLANIIYERSGSRMLLFNKGMM 337
Cdd:PRK08676 285 AVAAfsmLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVF 364
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 2473932290 338 NFMPMMCLWWFLLSSSNMAAPPSINLLGEIMLLNSIMSWS-WLMIIILVFL 387
Cdd:PRK08676 365 RLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISvWLVLAVLLLL 415
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-324 |
9.69e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 69.60 E-value: 9.69e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 108 NLFSFYVFFESSLIPTlFLILGWGYQPERMQAGIYLIFYTLFASLPLLLVLFSVYYSINTLYFPLLVfNINIHFLFYLFs 187
Cdd:PRK07234 115 DLISLYVALEVLSIAT-FLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLA-TADPEAFALIA- 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 188 iMAFLVKMPMFMVHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRMMKFIMLFSHIYNYFVIILSLMGgmivSIFCLRQ 267
Cdd:PRK07234 192 -LGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRIFGVGTALLG----VLFALLE 266
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 2473932290 268 IDLKSLIAYSSVVHMSMVICGLLimnWWGVLGslilmLGHGLCSSGLFCLANIIYER 324
Cdd:PRK07234 267 KDLKRMLAFSTISQLGFILAAPL---VGGLYA-----LAHGLVKSTLFLCAGALPSR 315
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-397 |
3.80e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 68.07 E-value: 3.80e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 109 LFSFYVFFESSLIPTlFLILGWGYQPERMQAGIYLIFYTLFASLPLLLVLFSVYYSINTLYFPLLVFNIN-----IHFLF 183
Cdd:PRK12665 133 LFNLYVGFEILLVAS-YVLLTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDelpsgTRTAL 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 184 YLFSIMAFLVKMPMFMVHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRMMKfiMLF-SHIYNYFVIILSLMgGMIVSI 262
Cdd:PRK12665 212 FAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHT--LLFpGGGLDTLLMVVALL-TMVVGI 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 263 F-CLRQIDLKSLIAYSSVVHMSMVICGLLIMNWWGVLGSLILMLGHGLCSSGLFCLANIIYERSGSRMLLFNKGMMNFMP 341
Cdd:PRK12665 289 LgAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASP 368
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 2473932290 342 MMCLWWFLLSSSNMAAPPSINLLGEIMLLNS-IMSWSWLMiIILVFLSFFSAMYTLY 397
Cdd:PRK12665 369 LLAVLFFVPALNLGGIPPFSGFIGKVALLEAgAEDGTWLA-WALVAGGVVTSLLTLY 424
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
109-399 |
1.42e-11 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 66.56 E-value: 1.42e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 109 LFSFYVFFESSLIPTLFLILgWGYQPERMQAGIYLIFYTLFASLpLLLVLFSVYYSINTLYFPLLVFN------INIHFL 182
Cdd:PRK08668 120 LLTLYIFWEIMTFSSFMMVP-MGKKESRKASLKYFVLSAIGAYA-MLYAIFLIYAKTGTFDFADISQGlindtsTGFALI 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 183 FYLFSIMAFLVKMPMFMVHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRMMKFIM---LFSHI--------YNYFVII 251
Cdd:PRK08668 198 VFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLPgtkLFSEFgtyrgvplFNYILAW 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 252 LSLMGGMIVSIFCLRQIDLKSLIAYSSVVHMSMVICGLLIMNWWGVLGSLILMLGHGLCSSGLFCLANIIYERSGSRMLL 331
Cdd:PRK08668 278 LGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTKIS 357
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2473932290 332 FNKGMMNFMPMMCLWWFLLSSSNMAAPPSINLLGEIMLLNSIMSWSwlMIIILVFLSFFSAMYTLYMY 399
Cdd:PRK08668 358 EMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKG--MPITAFMAFFGSIGSFLYVF 423
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-395 |
4.74e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 64.37 E-value: 4.74e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 108 NLFSFYVFFESSLIPTLFLILGWGYQPERMQAGIYLIFYTLFASLPLLLV--LFSVYYSINTLYFPLLVFNI---NIHFL 182
Cdd:PRK12662 131 DVFNIYVFLEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGIgfLYAITGTLNMGDMFLIIQDLptnRAIQI 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 183 FYLFSIMAFLVKMPMFMVHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRMMKFI-----MLFSHIYNYFVIILSLMGG 257
Cdd:PRK12662 211 GVLFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVfkanfVFTTLPFNNVFMILAALAI 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 258 MIVSIFCLRQIDLKSLIAYSSVVHMSMVICGLLIMNWWGVLGSLILMLGHGLCSSGLFCLANIIYERSGSRMLLFNKGMM 337
Cdd:PRK12662 291 VFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLW 370
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 2473932290 338 NFMPMMCLWWFLLSSSNMAAPPSINLLGEIMLLNSIM-SWSWLMIIILVFLSFFSAMYT 395
Cdd:PRK12662 371 KSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIkSNAWIGLVVLLVGSGLSVIYV 429
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
109-396 |
4.98e-10 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 61.50 E-value: 4.98e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 109 LFSFYVFFESSLIPTlFLILGWGYQPERMQAGIYLIFYTLFASLPLLLVLFSVYYSINTLYFPLLVFNIN-------IHF 181
Cdd:PRK12663 130 LFNLYVWFEVMLIAS-FVLITLGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNdmgdtatLTT 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 182 LFYLFsIMAFLVKMPMFMVHlWLPKAHVEAPISGSMILAGVLLKLGGYGLIRMmkFIMLFSHIYNYFVIILSLMGG--MI 259
Cdd:PRK12663 209 IALLF-LLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRV--FTLLFPQERELLHPLLATMAAitMV 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 260 VSIF-CLRQIDLKSLIAYSSVVHMSMVICGLLIMNWWGVLGSLILMLGHGLCSSGLFCLANIIYERSGSRMLLFNKGMMN 338
Cdd:PRK12663 285 IGALgALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYR 364
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 2473932290 339 FMPMMCLWWFLLSSSNMAAPPSINLLGEIMLLN-SIMSWSWLMIIILVFLSFFsAMYTL 396
Cdd:PRK12663 365 KEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQgALDNGAYILLALMLITSLI-TMYSL 422
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
108-398 |
7.05e-09 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 58.23 E-value: 7.05e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 108 NLFSFYVFFESSLIPTLFLILGWGYQPERMQAGIYLIFYTLFASLPLLLVLFSVYYSINTLYFPLLV---FNINIHFLFY 184
Cdd:PRK12646 131 NTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILgqaDHIKNHGLFI 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 185 LFSIMAFL---VKMPMFMVHLWLPKAhVEAPISGSMILAGVLLKLGGYGLIRMMKFIMLFSHIYNYFVIILSLMGGMIVS 261
Cdd:PRK12646 211 PMIFMFLLgafTKSAQFPFHIWLPRA-MAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGS 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 262 IFCLRQIDLKSLIAYSSVVH----MSMV-ICGLLIMNWWGVLGSLILM---------LGHGLCSSGLFCLANIIYERSGS 327
Cdd:PRK12646 290 ITALKQWDLKGILAYSTISQlgmiMAMVgIGGGYAQHQQDAIASIYVFvlfaalfhlMNHAIFKCALFMGVGIIDHEAGT 369
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 328 RMLLFNKGMMNFMPMMCLwWFLLSSSNMAAPPSIN-LLGEIMLLNSIMSWSWL----------MIIILVFLSFFSAMYTL 396
Cdd:PRK12646 370 RDIRILSGMRQLFPKMNL-VMTIAALSMAGVPFLNgFLSKEMFLDALTQTGQLsqfslismiiIVFIGVIASIFTFTYAL 448
|
..
gi 2473932290 397 YM 398
Cdd:PRK12646 449 YM 450
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
66-396 |
7.83e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 57.52 E-value: 7.83e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 66 LWICSLMVTSSSNIYFSFYYNNLFLFLIMFLLLMLYLSFSSMNLFSFYVFFESSLIPTLFLIlGWGYQPERMQAGIYLIF 145
Cdd:PRK06589 95 LWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLI-GHTRNNISLSGGYKYLK 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 146 YTLFASLPLLL-VLFSVYYSINTLYFPLLVFNINIHFLFYLFSIMAFLVKMPMFMVHLWLPKAHVEAPISGSMILAGVLL 224
Cdd:PRK06589 174 ILMISALLLFLpAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVV 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 225 KLGGYGLIRMMKFIMLFSHIYNYFVIILSLMGGMIVSIF-----CLRQIDLKSLIAYSSVVHMSMVICGLLIMNWWGVLG 299
Cdd:PRK06589 254 KTGLFCIYKILLYIFGLSYLQRIFAEFNWLIFIPIVSIFysslkALKTDNIKKILAYSTISQLSLALLSAFILTPKALGA 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 300 SLILMLGHGLCSSGLFCLANIIYERSGSRMLLFNKGMMNFMPMMCLWWFLLSSSNMAAPPSINLLGEIMLL-----NSIM 374
Cdd:PRK06589 334 AILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILlaaseQNQP 413
|
330 340
....*....|....*....|..
gi 2473932290 375 SWSWLMIIILVFLSFFSAMYTL 396
Cdd:PRK06589 414 WLSIIVMLVVIASSILSALYLL 435
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
189-359 |
8.08e-09 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 58.13 E-value: 8.08e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 189 MAFLVKMPMFMVHLWLPKAHVEA-PISGSMILAGVLlKLGGYGLIRmmkFIMLFSH--IYNYFVIILSLMGGMIVSIFCL 265
Cdd:PRK12650 216 VAAFTKSAQFPFHFWLPEAMAAItPVSAFLHAAAVV-KAGIYLLLR---FSPVFHDvaVWNWLLIIVGMITALMGAVFAV 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 266 RQIDLKSLIAYSSVVHMSMVICGLLIMNWWGVLGSLILMLGHGLCSSGLFCLANIIYERSGSRMLLFNKGMMNFMPMMcL 345
Cdd:PRK12650 292 QKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRRMPFT-F 370
|
170
....*....|....
gi 2473932290 346 WWFLLSSSNMAAPP 359
Cdd:PRK12650 371 VSVTIAALSMAAVP 384
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
188-394 |
2.77e-08 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 55.93 E-value: 2.77e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 188 IMAFLVKMPMFMVHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRMMKFIMLFSHIYNY--FVIILSLMGGMIVSIFCL 265
Cdd:PRK08377 213 IFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVlkLVIIMATLTVFFAELSAL 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 266 RQIDLKSLIAYSSVVHMSMVICGLLIMNWWGVLGSLILMLGHGLCSSGLFCLANIIYERSGSRMLLFNKGMMNFMPMMCL 345
Cdd:PRK08377 293 RQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTAL 372
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 2473932290 346 WWFLLSSSNMAAPPSINLLGEIMLLNSIMSWSWLMIIILV-FLSFFSAMY 394
Cdd:PRK08377 373 ALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVlGASVVEAVY 422
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
108-362 |
5.26e-08 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 55.28 E-value: 5.26e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 108 NLFSFYVFFESSLIPTLFLILGWGYQPERMQAGIYLIFYTLFASLPLLLVLFSVYYSINTLYF------PLLVFNINIHF 181
Cdd:PRK06521 134 DAFSFLVAWETMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFaamraaHLSPFWASLVF 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 182 LFYLFsimAFLVKMPMFMVHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRMMkFIMLFSHIYNYFVIILSLMGGMIV- 260
Cdd:PRK06521 214 LLALF---GFGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVV-FDLLGAPGWWWGVLVLALGAISAVl 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 261 -SIFCLRQIDLKSLIAYSSV-----VHMSMVICGLLIMNWWGVLGSLILM------LGHGLCSSGLFCLANIIYERSGSR 328
Cdd:PRK06521 290 gVLYALAEHDLKRLLAYSTIenigiIFVGLGLAMVFIAYGMPLLAALALTaalyhlLNHALFKSLLFLGAGAVLHATGTR 369
|
250 260 270
....*....|....*....|....*....|....
gi 2473932290 329 MLLFNKGMMNFMPMMClWWFLLSSSNMAAPPSIN 362
Cdd:PRK06521 370 DMEKLGGLIRRMPWTA-WAFLIGCLAISALPPLN 402
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-398 |
1.06e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 53.95 E-value: 1.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 108 NLFSFYVFFESSLIPTLFLILGWGYQPERMQAGIYLIFYTLFASLPLLLVLFSVYYSINTLYFPLLVFNI-----NIHFL 182
Cdd:PRK08376 142 DLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMsenptVVAKI 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 183 FYLFSIMAFLVKMPMFMVHLWLPKAHVEAPISGSMILagVLLKLGG-YGLIRMMkfIMLFSHIYN-----YFVIILSLMG 256
Cdd:PRK08376 222 ALALFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVL--FSIYGPAINlatvgWVIIILGCLT 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 257 GMIVSIFCLRQIDLKSLIAYSSV---------VHMSMVICGLLIMNWWGVL---GSLILMLGHGLCSSGLFCLANIIYER 324
Cdd:PRK08376 298 MFVGVAMAVVQKDVKRLLAYHSVsqigymllgLGVGLAALGDPAMASYGEIalaGGIYHIVNHALYKALLFLTAGAVIYE 377
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 325 SGSRMLLFNKGMMNFMPMMCLwWFLLSSSNMAAPPSIN------LLGE-IMLLNSIMSWSWLMIIILVFLSFFSAMYTLY 397
Cdd:PRK08376 378 TGTRNLNELGGLARTMPKTTI-AFLIGAAAIVGLPPFNgfaskwLIYEsSALFNPILGVIAMIGSVLTLASFVKVFHTAF 456
|
.
gi 2473932290 398 M 398
Cdd:PRK08376 457 F 457
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-87 |
2.27e-07 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 49.06 E-value: 2.27e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 1 MLKLMIMLFMLMPLCLINKIWW-----VVHSLFMMMCFFFMFHSYSIFNYGFISYFMGMDLFSYMFIMLSLWICSLMVTS 75
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWlwttsTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90
....*....|..
gi 2473932290 76 SSNIYFSFYYNN 87
Cdd:pfam01059 81 SQKHLKSEPNNR 92
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-388 |
5.33e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 48.41 E-value: 5.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 109 LFSFYVFFESSLIPTLFLILGWGYQPERMQAGIYLIFYTLFASLPLLLV--LFSVYYSINTLYFPLLVFNIN------IH 180
Cdd:PRK07691 130 IFNLFVFFEVMLMASYVLIVIGGTKIQLRESIKYVLINVVSSAFFVVAVaiLYSVVGTLNMADISVKIAELSagqtglIT 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 181 FLFYLFsIMAFLVKMPMFMVHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRMmkFIMLFSH---IYNYFVIILSLMGG 257
Cdd:PRK07691 210 VVAILF-LFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIART--FTLFFSHdtsFTHYLILILALLTI 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 258 MIVSIFCLRQIDLKSLIAYSSVVHMSMVICGLLIMNWWGVLGSLILMLGHGLCSSGLFCLANIIYERSGSRMLLFNKGMM 337
Cdd:PRK07691 287 IFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLI 366
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 2473932290 338 NFMPMMClWWFLLSSSNMAA-PPSINLLGEIMLLNSIMSWSWLMIIILVFLS 388
Cdd:PRK07691 367 KRYPVLG-WMFFIAALSLAGiPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLS 417
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
108-397 |
7.91e-05 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 44.97 E-value: 7.91e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 108 NLFSFYVFFESSLIPTLFLIlGWGYQPERMQAGIYLIFYTLFASLPLLLVLFSVYYSINTL-YFPLLVFNINIHFLFYLF 186
Cdd:PRK06525 134 TLLGLLLFFEITGLCSWALI-SYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFaLSALSGLHGSLKYLVFLG 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 187 SIMAFLVKMPMFMVHLWLPKAhVEAPISGSMIL-AGVLLKLGGYGLIRMMKFIMLFSHIYNYFVIILSLMGGMIVSIFCL 265
Cdd:PRK06525 213 ILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYL 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 266 RQIDLKSLIAYSSVVHMSMVICGLLIM---NWWGVLGSLILMLGHGLCSSGLFCLANIIYERSGSRMLLFNKGMMNFMPM 342
Cdd:PRK06525 292 PQQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPL 371
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2473932290 343 MCLWWFLLSSSNMAAPPSINLLGEIML------LNSIMSWSWLMIIILVFLSFFSAMYTLY 397
Cdd:PRK06525 372 VGVGFCVAALAITGVPPFNGFFSKFPIfaagfeLSVEYWILLPAMVLLLIESVASFAWFLR 432
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
173-373 |
8.56e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 44.78 E-value: 8.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 173 LVFNINIHFLFYLFSIMAFLVKMPM--FMVHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRMMKFIMLFShiYNYFVI 250
Cdd:PRK06459 150 TNFSYLPSPVPLILASFGFIIKMGMmpFLVSEWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIP--IGYFGL 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 251 ILSLMGG---MIVSIFCLRQIDLKSLIAYSSV----VHMSMVICGLLIMNWWGVLGSLILM------LGHGLCSSGLFCL 317
Cdd:PRK06459 228 TILAIGAfsiLFGALYAYVSENVKGLLAFSTIenngAILVALGLYMVTKQLITSIEHFSLItvilysFAHSVAKTGLFLS 307
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 2473932290 318 ANIIYERSGSRMLLFNKGMMNfmpmmcLWWFLLSSSNMAAPPSINLLGEIMLLNSI 373
Cdd:PRK06459 308 SGLQEKQSITYSKKIRNRWIE------LGLTLLASSLSGLLPNIGGVASWLLLESL 357
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
108-399 |
1.92e-04 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 43.60 E-value: 1.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 108 NLFSFYVFFESSLIPTLFLILGWGYQPERMQAGIYLIFYTLFASLPLLLVLFSVYYSINTLYFPLLVFNINIHFLFYLFS 187
Cdd:COG1009 132 NLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTILSSPLLT 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 188 IMAFLV------KMPMFMVHLWLPKAhVEAPISGS-------MILAGVLLklggygLIRMMkFIMLFSHIYNYFVIILSL 254
Cdd:COG1009 212 LILLLLllgafgKSAQFPLHFWLPDA-MEGPTPVSallhaatMVKAGVYL------LARLS-PLFALSPVWLTVVAIIGA 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 255 MGGMIVSIFCLRQIDLKSLIAYSSVVHMSMVICGLLIMNWWgvlGSLILMLGHGLCSSGLFCLANIIYERSGSRMLLFNK 334
Cdd:COG1009 284 ITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYV---AALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMG 360
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2473932290 335 GMMNFMPMMClWWFLLSSSNMAA-PPSINLLGEIMLLNSIM---SWSWLMIIILVFLSFFSAMYTLYMY 399
Cdd:COG1009 361 GLRKKMPITA-ITFLIGALSLAGiPPFAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLF 428
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
108-386 |
2.64e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 43.37 E-value: 2.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 108 NLFSFYVFFESSLIPTLFLIlgwGYQPERMQA---GIYLIFYTLFASLPLL---LVLFSV--YYSINTLYFPLLVFNINI 179
Cdd:PRK12647 116 NLITLFVFWELTSITSFLLI---GFNHEREAArraALQALLVTGGGGLALLaglILLGNVtgTYSLSELLASGDVIREHP 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 180 HFLFYLFSIM--AFlVKMPMFMVHLWLPKAhVEAPI-------SGSMILAGVLLklggyglirMMKFIMLFSHIYNYFvI 250
Cdd:PRK12647 193 LYLAILLLVLggAF-TKSAQFPFHFWLPNA-MEAPTpvsaylhSATMVKAGIYL---------LARLNPVLGGTPLWQ-T 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 251 ILSLMGG--MIVS-IFCLRQIDLKSLIAYSSVvhMSMvicGLLIM-----NWWGVLGSLILMLGHGLCSSGLFCLANIIY 322
Cdd:PRK12647 261 ILPLFGGltMLTGaLLAVRQTDLKLILAYSTV--SAL---GTLVMllglgSELAIKAAVLFLVAHSLYKGALFMVAGIID 335
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2473932290 323 ERSGSRMLLFNKGMMNFMPMMCLWWFLLSSSNMAAPPSINLLGEIMLLNSIM---SWSWLMIIILVF 386
Cdd:PRK12647 336 HETGTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLeapLWSLILTVAAVL 402
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
200-362 |
3.25e-04 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 42.89 E-value: 3.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 200 VHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRMMKFIMLFSHIYNYFVIILSLMGGMIVSIFCLRQIDLKSLIAYSSV 279
Cdd:PRK08042 199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTL 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 280 VHMSMVICGL-------------LIMnwWGVLGSLILMLGHGLCSSGLFCLANIIYERSGSRMLLFNKGMMNFMPMMCLw 346
Cdd:PRK08042 279 ENIGIILLGLgagvtgialeqpaLIA--LGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISI- 355
|
170
....*....|....*.
gi 2473932290 347 WFLLSSSNMAAPPSIN 362
Cdd:PRK08042 356 AMLVGLMAMAALPPLN 371
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
201-397 |
2.00e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 40.68 E-value: 2.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 201 HLWLPKAhVEAPISGSMIL-AGVLLKLGGYGLIRMMKfimLFSHIYNYFVIILSL-MGGMIVSIF-CLRQIDLKSLIAYS 277
Cdd:PRK12644 223 HFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARLAP---GFADVPVWRPTVLVLgLATMLLGGWrALRQHDLKLILAYG 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932290 278 SVVHMSMVICGLLIMNWWGVLGSLILMLGHGLCSSGLFCLANIIYERSGSRMLLFNKGMMNFMPMMClWWFLLSSSNMAA 357
Cdd:PRK12644 299 TVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSGLGRRQPVLA-VVAALAAASMAG 377
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 2473932290 358 -PPSINLLGEIMLLNSIM------SWSWLMIIILVFLSFFSAMYTLY 397
Cdd:PRK12644 378 lPPLLGFVAKEAALEAVLhdgalgPAGPVVLAGIVLGSILTVAYSLR 424
|
|
| |
