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Conserved domains on  [gi|2473932311|ref|YP_010735837|]
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ATP synthase F0 subunit 6 (mitochondrion) [Phytomastax pentaspinula]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 1.12e-89

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 263.18  E-value: 1.12e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311   1 MMTNLFSTFDPSTNiMNLSINWLSSIIGFFMLPAIYWFMPSRIMFIINKINSYLYQEFKMLLGNNNSfKMLLMFISILMM 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNK-GSTLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311  81 MVMNNFMGLFPYIFTSTSHLTMTLTIALPLWTSFMLYGWIINTNNMFSHLVPQGTPNILMPFMVLIETTSNIIRPGTLAV 160
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2473932311 161 RLSANMIAGHLLLTLMGNTGPMISYKLMTIMLIIQLMLVILESAVAVIQGYVFSVLSILYSSEVH 225
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 1.12e-89

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 263.18  E-value: 1.12e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311   1 MMTNLFSTFDPSTNiMNLSINWLSSIIGFFMLPAIYWFMPSRIMFIINKINSYLYQEFKMLLGNNNSfKMLLMFISILMM 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNK-GSTLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311  81 MVMNNFMGLFPYIFTSTSHLTMTLTIALPLWTSFMLYGWIINTNNMFSHLVPQGTPNILMPFMVLIETTSNIIRPGTLAV 160
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2473932311 161 RLSANMIAGHLLLTLMGNTGPMISYKLMTIMLIIQLMLVILESAVAVIQGYVFSVLSILYSSEVH 225
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-223 3.15e-44

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 147.74  E-value: 3.15e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311   5 LFSTFDPSTNIMNLSINW-----LSSIIGFFMLPAIYWFMPSRIMFIINKINSYLYQEFKMLLGNNnSFKMLLMFISILM 79
Cdd:TIGR01131   1 LFSQFDISPITLFSLTLLslillLSLLIFLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGK-KGKFFPLIFTLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311  80 MMVMNNFMGLFPYIFTSTSHLTMTLTIALPLWTSFMLYGWIINTNNMFSHLVPQGTPNILMPFMVLIETTSNIIRPGTLA 159
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2473932311 160 VRLSANMIAGHLLLTLMGNTGP-MISYKLMTIMLIIQLMLVILESAVAVIQGYVFSVLSILYSSE 223
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFsLMSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLND 224
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 69-222 4.97e-39

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 132.14  E-value: 4.97e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311  69 KMLLMFISILMMMVMNNFMGLFPYIFTSTSHLTMTLTIALPLWTSFMLYGWIINTNNMFSHLVPQGTPNILMPFMVLIET 148
Cdd:cd00310     3 KYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIEL 82

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2473932311 149 TSNIIRPGTLAVRLSANMIAGHLLLTLMGNTGPMISYKLMTIMLIIQLMLVILESAVAVIQGYVFSVLSILYSS 222
Cdd:cd00310    83 ISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP-synt_A pfam00119
ATP synthase A chain;
22-222 9.22e-24

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 94.48  E-value: 9.22e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311  22 WLSSIIGFFMLPAIYW----FMPSRIMFIINKINSYLYQEFKMLLGNNNSFKMLLMFISILMMMVMNNFMGLF---PYIF 94
Cdd:pfam00119   5 LIVALILLLFLLLATRktkkLVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311  95 TSTSHLTMTLTIALPLWTSFMLYGWIIN-TNNMFSHLVPQGTPNILMPFMVLIETTSNIIRPGTLAVRLSANMIAGHLLL 173
Cdd:pfam00119  85 TVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2473932311 174 TLMGNTGPMISYKLMT---IMLIIQLMLVILESAVAVIQGYVFSVLSILYSS 222
Cdd:pfam00119 165 LLLAGLIFALLSAGFLlgvIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 40-225 3.08e-18

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 79.35  E-value: 3.08e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311  40 PSRIMFIINKINSYLYQEFKMLLGNNNSfKMLLMFISILMMMVMNNFMGLFPYIFTSTSHLTMTLTIALPLWTSFMLYGW 119
Cdd:COG0356    28 PGGLQNFVEMLVEFVRNQVKDTIGKKGR-KFAPLLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGI 106

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311 120 IIN-TNNMFSHLVPQGTPnILMPFMVLIETTSNIIRPGTLAVRLSANMIAGHLLLTLMGNTGPMISYKLMTImlIIQLML 198
Cdd:COG0356   107 KKKgLGGYLKHLFFPPFP-WLAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSL--LLPVAW 183

                         170       180
                  ....*....|....*....|....*..
gi 2473932311 199 VILESAVAVIQGYVFSVLSILYSSEVH 225
Cdd:COG0356   184 TAFELLVGFLQAYIFTMLTAVYISLAV 210
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 1.12e-89

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 263.18  E-value: 1.12e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311   1 MMTNLFSTFDPSTNiMNLSINWLSSIIGFFMLPAIYWFMPSRIMFIINKINSYLYQEFKMLLGNNNSfKMLLMFISILMM 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNK-GSTLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311  81 MVMNNFMGLFPYIFTSTSHLTMTLTIALPLWTSFMLYGWIINTNNMFSHLVPQGTPNILMPFMVLIETTSNIIRPGTLAV 160
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2473932311 161 RLSANMIAGHLLLTLMGNTGPMISYKLMTIMLIIQLMLVILESAVAVIQGYVFSVLSILYSSEVH 225
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-223 3.15e-44

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 147.74  E-value: 3.15e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311   5 LFSTFDPSTNIMNLSINW-----LSSIIGFFMLPAIYWFMPSRIMFIINKINSYLYQEFKMLLGNNnSFKMLLMFISILM 79
Cdd:TIGR01131   1 LFSQFDISPITLFSLTLLslillLSLLIFLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGK-KGKFFPLIFTLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311  80 MMVMNNFMGLFPYIFTSTSHLTMTLTIALPLWTSFMLYGWIINTNNMFSHLVPQGTPNILMPFMVLIETTSNIIRPGTLA 159
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2473932311 160 VRLSANMIAGHLLLTLMGNTGP-MISYKLMTIMLIIQLMLVILESAVAVIQGYVFSVLSILYSSE 223
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFsLMSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLND 224
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 1-224 1.56e-43

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 145.95  E-value: 1.56e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311   1 MMTNLFSTFDP--STNIMNLSINWLSSIIGFFMLPAIYWFMPSRIMFIINKINSYLYQEFkmLLGNNNSFKMLLMFISIL 78
Cdd:MTH00176    1 MLVDLFSSFDPpnKNIFSMISLSWITLLLFLLLMPSSVWFCPSKLQVFMLMFSTFLPEMI--LRSNGSYILGSASIIISL 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311  79 MMMVM-NNFMGLFPYIFTSTSHLTMTLTIALPLWTSFMLYGWIINTNNMFSHLVPQGTPNILMPFMVLIETTSNIIRPGT 157
Cdd:MTH00176   79 FILVMsLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLT 158

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311 158 LAVRLSANMIAGHLLLTLMGNTGP---MISYKLMTIMLIIQLMLVILESAVAVIQGYVFSVLSILYSSEV 224
Cdd:MTH00176  159 LAVRLAANLSAGHLLLGLLGAAMWgllPVSPLIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDEH 228
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 69-222 4.97e-39

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 132.14  E-value: 4.97e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311  69 KMLLMFISILMMMVMNNFMGLFPYIFTSTSHLTMTLTIALPLWTSFMLYGWIINTNNMFSHLVPQGTPNILMPFMVLIET 148
Cdd:cd00310     3 KYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIEL 82

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2473932311 149 TSNIIRPGTLAVRLSANMIAGHLLLTLMGNTGPMISYKLMTIMLIIQLMLVILESAVAVIQGYVFSVLSILYSS 222
Cdd:cd00310    83 ISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 1-223 5.62e-38

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 131.78  E-value: 5.62e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311   1 MMTNLFSTFDPSTNIMNL----SINWLSSIIGFFMLPAIYWFMPSRIMFIINKINSYLYQEFKMLLGNNnsFKMLLMFIS 76
Cdd:MTH00005    1 MLTDIFSSFDPATNSLFNnlssTAFWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFGKH--LKGFSSLIS 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311  77 ILM-MMVMNNFMGLFPYIFTSTSHLTMTLTIALPLWTSFMLYGWIINTNNMFSHLVPQGTPNILMPFMVLIETTSNIIRP 155
Cdd:MTH00005   79 ALFtMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRP 158

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2473932311 156 GTLAVRLSANMIAGHLLLTLMG--NTGPMISYKLMTIMLI-IQLMLVILESAVAVIQGYVFSVLSILYSSE 223
Cdd:MTH00005  159 ITLSFRLAANMSAGHIVLSLIGiyAASALFSSISSTILLIlTQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 3-223 4.58e-37

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 129.32  E-value: 4.58e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311   3 TNLFSTFDPSTnIMNLSINWLSSIIG---FFMLPAIYWFmPSRIMFIINKINSYLyqeFKMLL--GNNNSFKMLLMFISI 77
Cdd:MTH00035    5 NSIFGQFSPDT-ILFIPLTLLSSVIAlswLFFINPTNWL-PSRSQSIWLTFRQEI---LKLIFqnTNPNTAPWAGLLTTV 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311  78 LMMMVMNNFMGLFPYIFTSTSHLTMTLTIALPLWTSFMLYGWIINTNNMFSHLVPQGTPNILMPFMVLIETTSNIIRPGT 157
Cdd:MTH00035   80 FILILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIA 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2473932311 158 LAVRLSANMIAGHLLLTLMGNTGPMI--SYKLMTIMLIIQLMLVILESAVAVIQGYVFSVLSILYSSE 223
Cdd:MTH00035  160 LGLRLAANLTAGHLLIFLLSTAIWELsnSPLISIITLIIFFLLFILEIGVACIQAYVFTALVHFYLEQ 227
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 1-223 3.29e-35

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 124.59  E-value: 3.29e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311   1 MMTNLFSTFDPST-NIMNLSIN-WLSSIIGFFMLPAIYWFMPSRIMFIINKINSYLYQEFKMLLGNNNSFKMLLMFiSIL 78
Cdd:MTH00173    1 MMVDLFSSFDDHNsSFSSLSFLmWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSGLNLGGFSLLLS-SLF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311  79 MMMVMNNFMGLFPYIFTSTSHLTMTLTIALPLWTSFMLYGWIINTNNMFSHLVPQGTPNILMPFMVLIETTSNIIRPGTL 158
Cdd:MTH00173   80 LFLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTL 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2473932311 159 AVRLSANMIAGHLLLTLMGNTGP----MISYKLMTIMLIIQLMLVILESAVAVIQGYVFSVLSILYSSE 223
Cdd:MTH00173  160 TVRLLANISAGHIVLTLIGNYLSsslfSSSVVSLLLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 1-223 3.02e-33

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 119.28  E-value: 3.02e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311   1 MMTNLFSTFDpSTNIMNLSINWLSSIIGFFMLPAIY--WFMPSRIMFIINKINSYLYQEFKMLlgNNNSFKMLLMFISIL 78
Cdd:MTH00179    1 MMLSMFDQFE-SPSLLGIPLLALALLLPWLLFPSLTnrWLNNRLSTLQSWFFGSFTFQLMQPI--NKKGHKWAVLFLSLM 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311  79 MMMVMNNFMGLFPYIFTSTSHLTMTLTIALPLWTSFMLYGWIINTNNMFSHLVPQGTPNILMPFMVLIETTSNIIRPGTL 158
Cdd:MTH00179   78 LFLLTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLAL 157

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2473932311 159 AVRLSANMIAGHLLLTLMGnTGPMISYKLMTIM----LIIQLMLVILESAVAVIQGYVFSVLSILYSSE 223
Cdd:MTH00179  158 GVRLTANITAGHLLMHLIS-SAVFVLMNFMGMValltLLVLFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 1-220 1.01e-32

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 118.13  E-value: 1.01e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311   1 MMTNLFSTFDPSTnIMNLSINWLSSIIGFFMLPAIYWFMPSRIMFI-INKINSYLYQefKMLLGNNNSFKMLLMFISILM 79
Cdd:MTH00101    1 MNENLFASFITPT-ILGLPIVTLIIMFPSLLFPTPNRLINNRLISIqQWLIQLTSKQ--MMTIHNTKGQTWSLMLMSLIL 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311  80 MMVMNNFMGLFPYIFTSTSHLTMTLTIALPLWTSFMLYGWIINTNNMFSHLVPQGTPNILMPFMVLIETTSNIIRPGTLA 159
Cdd:MTH00101   78 FIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALA 157

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2473932311 160 VRLSANMIAGHLLLTLMGNTG---PMISYKLMTIMLIIQLMLVILESAVAVIQGYVFSVLSILY 220
Cdd:MTH00101  158 VRLTANITAGHLLIHLIGGATlalMSISTTTALITFIILILLTILEFAVALIQAYVFTLLVSLY 221
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 60-223 1.50e-32

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 117.62  E-value: 1.50e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311  60 MLLGNNNSFKMLLMFISILMMMVMNNFMGLFPYIFTSTSHLTMTLTIALPLWTSFMLYGWIINTNNMFSHLVPQGTPNIL 139
Cdd:MTH00120   59 MLPLNKKGHKWALILTSLMLLLLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPL 138

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311 140 MPFMVLIETTSNIIRPGTLAVRLSANMIAGHLLLTLMG-------NTGPMISyklmTIMLIIQLMLVILESAVAVIQGYV 212
Cdd:MTH00120  139 IPALILIETISLLIRPLALGVRLTANLTAGHLLIQLIStatlnllPTMPTLS----LLTLIILLLLTILELAVAMIQAYV 214

                         170
                  ....*....|.
gi 2473932311 213 FSVLSILYSSE 223
Cdd:MTH00120  215 FVLLLSLYLQE 225
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 69-223 4.47e-29

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 108.42  E-value: 4.47e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311  69 KMLLMFISILMMMVMNNFMGLFPYIFTSTSHLTMTLTIALPLWTSFMLYGWIINTNNMFSHLVPQGTPNILMPFMVLIET 148
Cdd:MTH00132   68 KWALLLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIET 147

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2473932311 149 TSNIIRPGTLAVRLSANMIAGHLLLTLMGNTGPMISYKLMTIML---IIQLMLVILESAVAVIQGYVFSVLSILYSSE 223
Cdd:MTH00132  148 ISLFIRPLALGVRLTANLTAGHLLIQLIATAAFVLLPLMPTVAIltaTLLFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 60-223 1.42e-28

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 107.36  E-value: 1.42e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311  60 MLLGNNNSFKMLLMFISILMMMVMNNFMGLFPYIFTSTSHLTMTLTIALPLWTSFMLYGWIINTNNMFSHLVPQGTPNIL 139
Cdd:MTH00073   59 MLPLNTPGHKWALILTSLMVFLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLL 138

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311 140 MPFMVLIETTSNIIRPGTLAVRLSANMIAGHLLLTLMgNTGPMISYKLMTIM----LIIQLMLVILESAVAVIQGYVFSV 215
Cdd:MTH00073  139 IPILIIIETISLFIRPLALGVRLTANLTAGHLLIQLI-STATLVLLPLMPTVsiltMIVLFLLTLLEIAVAMIQAYVFVL 217


                  ....*...
gi 2473932311 216 LSILYSSE 223
Cdd:MTH00073  218 LLSLYLQE 225
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 15-220 1.70e-25

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 99.35  E-value: 1.70e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311  15 IMNLSINWLSSIIGFFMLPAIYWFMPSRIMFIINKINSYLYQEFKMLLGNNnSFKMLLMFISILMMMVMNNFMGLFPYIF 94
Cdd:MTH00172   17 LTNSSIMMILVIIVVLLLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNE-GLKYFPFIISLFFFIVFLNLLGLFPYVF 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311  95 TSTSHLTMTLTIALPLWTSFMLYGWIINTNNMFSHLVPQGTPNILMPFMVLIETTSNIIRPGTLAVRLSANMIAGHLLLT 174
Cdd:MTH00172   96 TPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAANLSAGHLLFA 175

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 2473932311 175 LMGNTG---PMISYKLMTIMLIIQLMLVILESAVAVIQGYVFSVLSILY 220
Cdd:MTH00172  176 ILAGFGfnmLCASGFLSLFPLLIMVFITLLEIAVAVIQAYVFCLLTTIY 224
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 17-220 8.52e-25

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 97.77  E-value: 8.52e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311  17 NLSINWLSSIIGFFMLPAIYWFMPSRIMFIINKINSYLYQEFKMLLGNNNSfKMLLMFISILMMMVMNNFMGLFPYIFTS 96
Cdd:MTH00175   30 NSSMMMVLAVIIFWLLLKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQ-KYFPFILSLFLFIAILNILGLFPYVFTP 108

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311  97 TSHLTMTLTIALPLWTSFMLYGWIINTNNMFSHLVPQGTPNILMPFMVLIETTSNIIRPGTLAVRLSANMIAGHLLLT-- 174
Cdd:MTH00175  109 TAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIRAISLGVRLAANISAGHLLFAil 188

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2473932311 175 ------LMGNTGPMISYKLMTIMLIIqlmlVILESAVAVIQGYVFSVLSILY 220
Cdd:MTH00175  189 sgfafnMLSNGLIILSLFPMLIMIFI----TLLEMAVAVIQAYVFCLLTTIY 236
ATP-synt_A pfam00119
ATP synthase A chain;
22-222 9.22e-24

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 94.48  E-value: 9.22e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311  22 WLSSIIGFFMLPAIYW----FMPSRIMFIINKINSYLYQEFKMLLGNNNSFKMLLMFISILMMMVMNNFMGLF---PYIF 94
Cdd:pfam00119   5 LIVALILLLFLLLATRktkkLVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311  95 TSTSHLTMTLTIALPLWTSFMLYGWIIN-TNNMFSHLVPQGTPNILMPFMVLIETTSNIIRPGTLAVRLSANMIAGHLLL 173
Cdd:pfam00119  85 TVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2473932311 174 TLMGNTGPMISYKLMT---IMLIIQLMLVILESAVAVIQGYVFSVLSILYSS 222
Cdd:pfam00119 165 LLLAGLIFALLSAGFLlgvIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 38-220 2.57e-18

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 80.75  E-value: 2.57e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311  38 FMPSRIMFIINKINSYLYQEFKMLLGNNNSfKMLLMFISILMMMVMNNFMGLFPYIFTSTSHLTMTLTIALPLWTSFMLY 117
Cdd:MTH00174   59 LVPNRILVGLELIYSHFYTVLKDNLGNKGG-NYLAFVLSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLA 137

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311 118 GWIINTNNMFSHLVPQGTPNILMPFMVLIETTSNIIRPGTLAVRLSANMIAGHLLLTLMGNTG-PMISYKLMT---IMLI 193
Cdd:MTH00174  138 GLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIASFAwKMINTGILIgsfVPFA 217

                         170       180
                  ....*....|....*....|....*..
gi 2473932311 194 IQLMLVILESAVAVIQGYVFSVLSILY 220
Cdd:MTH00174  218 ILIFVTILEMAVAIIQAYVFTLLTIVY 244
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 40-225 3.08e-18

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 79.35  E-value: 3.08e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311  40 PSRIMFIINKINSYLYQEFKMLLGNNNSfKMLLMFISILMMMVMNNFMGLFPYIFTSTSHLTMTLTIALPLWTSFMLYGW 119
Cdd:COG0356    28 PGGLQNFVEMLVEFVRNQVKDTIGKKGR-KFAPLLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGI 106

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311 120 IIN-TNNMFSHLVPQGTPnILMPFMVLIETTSNIIRPGTLAVRLSANMIAGHLLLTLMGNTGPMISYKLMTImlIIQLML 198
Cdd:COG0356   107 KKKgLGGYLKHLFFPPFP-WLAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSL--LLPVAW 183

                         170       180
                  ....*....|....*....|....*..
gi 2473932311 199 VILESAVAVIQGYVFSVLSILYSSEVH 225
Cdd:COG0356   184 TAFELLVGFLQAYIFTMLTAVYISLAV 210
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 69-225 1.63e-14

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 69.82  E-value: 1.63e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311  69 KMLLMFISILMMMVMNNFMGLFP-YIFTSTSHLTMTLTIALPLWTSFMLYGWIIN-TNNMFSHLVPQgtpniLMPFMVLI 146
Cdd:PRK05815   71 KFAPLAFTLFLFILLMNLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGIKKKgLGGYLKEFYLQ-----PHPLLLPI 145

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2473932311 147 ETTSNIIRPGTLAVRLSANMIAGHLLLTLMGNTGPMISYkLMTIMLIIQLMLVILESAVAVIQGYVFSVLSILYSSEVH 225
Cdd:PRK05815  146 EIISEFSRPISLSLRLFGNMLAGELILALIALLGGAGLL-LALAPLILPVAWTIFEIFVGTLQAYIFMMLTIVYISMAV 223
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 69-220 2.54e-10

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 58.99  E-value: 2.54e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311  69 KMLLMFISILMMMVMNNFMGLFPYIFTSTSHLTMTLTIALplWTSFMLYGWIINTNNM---FSHLVpQGTPNILMPFMVL 145
Cdd:PRK13419  169 KFLPYLLTVFFFILVCNLLGLVPYGATATGNINVTLTLAV--FTFFITQYAAIKAHGIkgyLAHLT-GGTHWSLWIIMIP 245

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311 146 IETTSNIIRPGTLAVRLSANMIAGHL-LLTLMGntgpmISYKLMTIMLII------QLMLVILESAVAVIQGYVFSVLSI 218
Cdd:PRK13419  246 IEFIGLFTKPFALTVRLFANMTAGHIvILSLIF-----ISFILKSYIVAVavsvpfAIFIYLLELFVAFLQAYIFTMLSA 320


                  ..
gi 2473932311 219 LY 220
Cdd:PRK13419  321 LF 322
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 95-220 1.22e-07

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 51.04  E-value: 1.22e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311  95 TSTSHLTMTLTIALPLWTSFMLYGWIINTNNMFSHLVPQGTPNILMPFMVLIE-TTSNIIRPGTLAVRLSANMIAGH-LL 172
Cdd:PRK13417  217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEfIVSPMAKTFALTVRLLANMTAGHvII 296

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 2473932311 173 LTLMGNTGPMISYKLMTIMLIIQLMLVILESAVAVIQGYVFSVLSILY 220
Cdd:PRK13417  297 LALMGFIFQFQSWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLF 344
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 74-223 7.37e-07

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 48.05  E-value: 7.37e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311  74 FISILMMMVMNNFMGLFPYIFTSTSHLTMTLTIALPLWTSFMLYgwIINTNNMFSHLVPQGTPNILMPF-MVLIETTSNI 152
Cdd:MTH00087   55 SFFTFIVLLLFCFGGLFPYSFSPCGMVEFTFLYALVAWLSTFLS--FLSKSEKFSVYLSKGSDSFLKTFsMLFVEIVSEL 132

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2473932311 153 IRPGTLAVRLSANMIAGHLLLTLMGNTGpmisyklmTIMLIIQLMLVILESAVAVIQGYVFSVLSILYSSE 223
Cdd:MTH00087  133 SRPLALTLRLTVNLMVGHLISSLLNFLG--------EKYVWLSILAIMMECFVAFIQSYIFSRLIYLYLNE 195
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 46-225 1.73e-05

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 43.72  E-value: 1.73e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311  46 IINKINSYLYQEFKMLLGNNNSfkmlLMFISILMMMVMNNFMGL-FPYIFTSTSHLTMTLTIALPLWTSFMLYGWIINTN 124
Cdd:MTH00050    1 MFVNDFSSLFSLIYKLILGGSV----SYYYSVVLFIVLFLFLLYrLPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLN 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311 125 NMFSHLVPQGTPNILMPFMVLIETTSNIIRPGTLAVRLSANMIAGHLLLTLMGNTGpMISYKLMTIMLIiqlmLVILESA 204
Cdd:MTH00050   77 EFFSSFVPVGTPLYICPFVCIAETISYIIRPVVLILRPFINISLGCFGGVALGNLC-FISYWWFLVLFF----LFFYEVF 151

                         170       180
                  ....*....|....*....|.
gi 2473932311 205 VAVIQGYVfsVLSILYSSEVH 225
Cdd:MTH00050  152 VALVHWFI--VSSILSFSVDH 170
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 40-220 8.20e-04

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 39.34  E-value: 8.20e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311  40 PSRIMFIINKINSYLYQEFKMLLGNNnsFKMLLMFISIL-MMMVMNNFMGLFPYIFTSTSHLTMTLTIALPLWTSFMLYG 118
Cdd:PRK13420   45 PGRFQVALEGVVSTIEDAIKEVLPRH--ARLVLPFVGTLwIFILVANLIGLIPGFHSPTADLSVTAALALLVFFSVHWFG 122

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932311 119 wiINTNNMFSHLVPQGTPN-ILMPFMVLiettSNIIRPGTLAVRLSANM----IAGHLLLTLMGNTGPmisyklmtimlI 193
Cdd:PRK13420  123 --IRAEGLREYLKHYLSPSpFLLPFHLI----SEITRTLALAVRLFGNImsleLAALLVLLVAGFLVP-----------V 185

                         170       180
                  ....*....|....*....|....*..
gi 2473932311 194 IQLMLVILEsavAVIQGYVFSVLSILY 220
Cdd:PRK13420  186 PILMLHIIE---ALVQAYIFGMLALIY 209
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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