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Conserved domains on  [gi|2473932308|ref|YP_010735845|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Phytomastax pentaspinula]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-311 2.20e-147

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 416.09  E-value: 2.20e-147
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308   6 FIMFLINYLLLIICVLISVAFLTLFERKILGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYMSPIIN 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308  86 LMVSLIIWVIFPYLTYMCSFLYSFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIMLIG 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308 166 TYNISYYYYYQFNCWFIIFMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYASIMFMSMLI 245
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2473932308 246 SLIFLGGDYFSFLFYLKVTTVSFMFIWVRGTLPRYRYDKLMFLAWKSFLPLSLNFFIFFLGFKLLL 311
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-311 2.20e-147

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 416.09  E-value: 2.20e-147
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308   6 FIMFLINYLLLIICVLISVAFLTLFERKILGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYMSPIIN 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308  86 LMVSLIIWVIFPYLTYMCSFLYSFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIMLIG 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308 166 TYNISYYYYYQFNCWFIIFMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYASIMFMSMLI 245
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2473932308 246 SLIFLGGDYFSFLFYLKVTTVSFMFIWVRGTLPRYRYDKLMFLAWKSFLPLSLNFFIFFLGFKLLL 311
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
14-303 3.72e-98

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 291.30  E-value: 3.72e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308  14 LLLIICVLISVAFLTLFERKILGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYMSPIINLMVSLIIW 93
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308  94 VIFPYLTYM--CSFLYSFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIMLIGTYNISY 171
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308 172 YYYYQFNCWFIIFMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYASIMFMSMLISLIFLG 251
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2473932308 252 GDYFSFL------FYLKVTTVSFMFIWVRGTLPRYRYDKLMFLAWKSFLPLSLNFFIF 303
Cdd:pfam00146 243 GWLGPFPlpgllwFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 5-298 2.82e-94

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 282.40  E-value: 2.82e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308   5 DFIMFLINYLLLIICVLISVAFLTLFERKILGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYMSPII 84
Cdd:COG1005     7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308  85 NLMVSLIIWVIFPYLTYMC--SFLYSFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIM 162
Cdd:COG1005    87 AFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308 163 LIGTYNISYYYYYQFNC-WFIIFMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYASIMFM 241
Cdd:COG1005   167 LAGSLNLSEIVEAQAGGlWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2473932308 242 SMLISLIFLGGDYFSFL------------FYLKVTTVSFMFIWVRGTLPRYRYDKLMFLAWKSFLPLSL 298
Cdd:COG1005   247 SALATTLFLGGWLGPFPilplgglpgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
14-298 1.66e-45

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 157.17  E-value: 1.66e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308  14 LLLIICVLISVAFLTLFERKILGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYMSPIINLMVSLIIW 93
Cdd:NF040610   17 LALIGAVFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLML 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308  94 VIFP----------YLTYMCSFLYSFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIML 163
Cdd:NF040610   97 VAIPfgaviingveYPLVVTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIM 176

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308 164 IGTYNISYYYYYQFNCWFIiFMLPL-FLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYASIMFMS 242
Cdd:NF040610  177 AGSLNIVEIVEAQSPIWFA-FLQPIgFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGS 255

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2473932308 243 MLISLIFLGGDYFSFL---------------FYLKVTTVSFMFIWVRGTLPRYRYDKLMFLAWKSFLPLSL 298
Cdd:NF040610  256 FLVVLLFLGGWNLPGFvtdipvlgiilptlfFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSL 326
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-311 2.20e-147

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 416.09  E-value: 2.20e-147
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308   6 FIMFLINYLLLIICVLISVAFLTLFERKILGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYMSPIIN 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308  86 LMVSLIIWVIFPYLTYMCSFLYSFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIMLIG 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308 166 TYNISYYYYYQFNCWFIIFMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYASIMFMSMLI 245
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2473932308 246 SLIFLGGDYFSFLFYLKVTTVSFMFIWVRGTLPRYRYDKLMFLAWKSFLPLSLNFFIFFLGFKLLL 311
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 7-309 1.54e-126

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 363.59  E-value: 1.54e-126
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308   7 IMFLINYLLLIICVLISVAFLTLFERKILGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYMSPIINL 86
Cdd:MTH00225    1 MSFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308  87 MVSLIIWVIFPYLTYMCSFLYSFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIMLIGT 166
Cdd:MTH00225   81 ILSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLT 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308 167 YNISYYYYYQFNCWFIIFMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYASIMFMSMLIS 246
Cdd:MTH00225  161 YNLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTS 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2473932308 247 LIFLGGDY--FSFLFYLKVTTVSFMFIWVRGTLPRYRYDKLMFLAWKSFLPLSLNFFIFFLGFKL 309
Cdd:MTH00225  241 ILFFGGFFvtIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 7-307 4.45e-120

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 347.24  E-value: 4.45e-120
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308   7 IMFLINYLLLIICVLISVAFLTLFERKILGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYMSPIINL 86
Cdd:MTH00143    1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308  87 MVSLIIWVIFPYLTYMCSFLYSFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIMLIGT 166
Cdd:MTH00143   81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308 167 YNISYYYYYQFNCWFIIFMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYASIMFMSMLIS 246
Cdd:MTH00143  161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2473932308 247 LIFLGGDYFSFL-----FYLKVTTVSFMFIWVRGTLPRYRYDKLMFLAWKSFLPLSLNFFIFFLGF 307
Cdd:MTH00143  241 VLFFGGSSVLFLlggvvFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVL 306
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 6-311 7.23e-110

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 321.47  E-value: 7.23e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308   6 FIMFLINYLLLIICVLISVAFLTLFERKILGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYMSPIIN 85
Cdd:MTH00218    1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308  86 LMVSLIIWVIFPYLTYMCSFLYSFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIMLIG 165
Cdd:MTH00218   81 LTLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308 166 TYNISYYYYYQFNCWFIIFMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYASIMFMSMLI 245
Cdd:MTH00218  161 GFSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLS 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2473932308 246 SLIFLGGDYFSFLFYLKVTTVSFMFIWVRGTLPRYRYDKLMFLAWKSFLPLSLNFFIFFLGFKLLL 311
Cdd:MTH00218  241 VILFLGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSF 306
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 7-298 6.94e-104

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 306.44  E-value: 6.94e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308   7 IMFLINYLLLIICVLISVAFLTLFERKILGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYMSPIINL 86
Cdd:MTH00111    5 LLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILAL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308  87 MVSLIIWVIFPYLTYMCSFLYSFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIMLIGT 166
Cdd:MTH00111   85 LLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGG 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308 167 YNISYYYYYQFNCWFIIFMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYASIMFMSMLIS 246
Cdd:MTH00111  165 YTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTT 244

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2473932308 247 LIFLGGDY-------FSFLFYLKVTTVSFMFIWVRGTLPRYRYDKLMFLAWKSFLPLSL 298
Cdd:MTH00111  245 ILFLNPSTlnlppelFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTL 303
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 7-311 3.33e-103

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 304.36  E-value: 3.33e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308   7 IMFLINYLLLIICVLISVAFLTLFERKILGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYMSPIINL 86
Cdd:MTH00195    2 MISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLAL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308  87 MVSLIIWVIFPYLTYMCSFLYSFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIMLIGT 166
Cdd:MTH00195   82 ALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308 167 YNISYYYYYQFNCWFIIFMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYASIMFMSMLIS 246
Cdd:MTH00195  162 FDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTT 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2473932308 247 LIFLGGDYfSFLFYLKVTTVSFMFIWVRGTLPRYRYDKLMFLAWKSFLPLSLNFFIFFLGFKLLL 311
Cdd:MTH00195  242 ILFLGGGG-TIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 6-305 5.62e-103

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 304.24  E-value: 5.62e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308   6 FIMFLINYLLLIICVLISVAFLTLFERKILGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYMSPIIN 85
Cdd:MTH00071    4 LISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308  86 LMVSLIIWVIFPYLTYMCSFLYSFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIMLIG 165
Cdd:MTH00071   84 LTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTG 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308 166 TYNISYYYYYQFNCWFIIFMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYASIMFMSMLI 245
Cdd:MTH00071  164 GFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLS 243

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2473932308 246 SLIFLGGDYFSFLFYL-------KVTTVSFMFIWVRGTLPRYRYDKLMFLAWKSFLPLSLNFFIFFL 305
Cdd:MTH00071  244 TILFLGSTYNHLQPELstmnlmiKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHI 310
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 8-298 7.12e-103

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 303.85  E-value: 7.12e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308   8 MFLINYLLLIICVLISVAFLTLFERKILGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYMSPIINLM 87
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308  88 VSLIIWVIFPYLTYMCSFLYSFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIMLIGTY 167
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308 168 NISYYYYYQFNCWFIIFMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYASIMFMSMLISL 247
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2473932308 248 IFLGGDY-------FSFLFYLKVTTVSFMFIWVRGTLPRYRYDKLMFLAWKSFLPLSL 298
Cdd:MTH00104  241 LFLGAFHnpympelYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTL 298
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 7-311 1.51e-102

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 303.05  E-value: 1.51e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308   7 IMFLINYLLLIICVLISVAFLTLFERKILGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYMSPIINL 86
Cdd:MTH00040    4 ILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFL 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308  87 MVSLIIWVIFPYLTYMCSFLYSFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIMLIGT 166
Cdd:MTH00040   84 FLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGS 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308 167 YNISYYYYYQFNCWFIIFMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYASIMFMSMLIS 246
Cdd:MTH00040  164 FSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSV 243

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2473932308 247 LIFLGGD-YFSFLFYL-------KVTTVSFMFIWVRGTLPRYRYDKLMFLAWKSFLPLSLNFFIFFLGFKLLL 311
Cdd:MTH00040  244 ILFLGGGsPFNEIFPIniiivgiKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLL 316
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 2-305 2.76e-100

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 297.29  E-value: 2.76e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308   2 MKYDFIMFLINYLLLIICVLISVAFLTLFERKILGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYMS 81
Cdd:MTH00134    1 MLSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308  82 PIINLMVSLIIWVIFPYLTYMCSFLYSFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTI 161
Cdd:MTH00134   81 PMLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVI 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308 162 MLIGTYNISYYYYYQFNCWFIIFMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYASIMFM 241
Cdd:MTH00134  161 IFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLM 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2473932308 242 SMLISLIFLGGDYFSFLFYL-------KVTTVSFMFIWVRGTLPRYRYDKLMFLAWKSFLPLSLNFFIFFL 305
Cdd:MTH00134  241 NTLSAILFLGASHIPTLPELttinlmtKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHL 311
NADHdh pfam00146
NADH dehydrogenase;
14-303 3.72e-98

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 291.30  E-value: 3.72e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308  14 LLLIICVLISVAFLTLFERKILGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYMSPIINLMVSLIIW 93
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308  94 VIFPYLTYM--CSFLYSFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIMLIGTYNISY 171
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308 172 YYYYQFNCWFIIFMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYASIMFMSMLISLIFLG 251
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2473932308 252 GDYFSFL------FYLKVTTVSFMFIWVRGTLPRYRYDKLMFLAWKSFLPLSLNFFIF 303
Cdd:pfam00146 243 GWLGPFPlpgllwFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 7-311 2.26e-95

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 284.37  E-value: 2.26e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308   7 IMFLINYLLLIICVLISVAFLTLFERKILGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYMSPIINL 86
Cdd:MTH00010    3 ISFFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308  87 MVSLIIWVIFPYLTYMCSFLYSFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIMLIGT 166
Cdd:MTH00010   83 ILALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQT 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308 167 YNISYYYYYQfNCWFIIFMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYASIMFMSMLIS 246
Cdd:MTH00010  163 FSFSKIIMSQ-YSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTS 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2473932308 247 LIFLGGDYFSFL----FYLKVTTVSFMFIWVRGTLPRYRYDKLMFLAWKSFLPLSLNFFIFFLGFKLLL 311
Cdd:MTH00010  242 VFFTSFIPSIFIsdlmLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLL 310
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 5-298 2.82e-94

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 282.40  E-value: 2.82e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308   5 DFIMFLINYLLLIICVLISVAFLTLFERKILGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYMSPII 84
Cdd:COG1005     7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308  85 NLMVSLIIWVIFPYLTYMC--SFLYSFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIM 162
Cdd:COG1005    87 AFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308 163 LIGTYNISYYYYYQFNC-WFIIFMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYASIMFM 241
Cdd:COG1005   167 LAGSLNLSEIVEAQAGGlWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2473932308 242 SMLISLIFLGGDYFSFL------------FYLKVTTVSFMFIWVRGTLPRYRYDKLMFLAWKSFLPLSL 298
Cdd:COG1005   247 SALATTLFLGGWLGPFPilplgglpgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
6-298 5.20e-91

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 273.61  E-value: 5.20e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308   6 FIMFLINYLLLIICVLISVAFLTLFERKILGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYMSPIIN 85
Cdd:PRK06076    9 LLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIA 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308  86 LMVSLIIWVIFPYL-TYMCSFL-YSFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIML 163
Cdd:PRK06076   89 FIPAFLAWAVIPFGpELVIADLnVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLL 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308 164 IGTYNISYYYYYQFNCWFIIFMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYASIMFMSM 243
Cdd:PRK06076  169 AGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSA 248

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2473932308 244 LISLIFLGGDYFSFL----------FYLKVTTVSFMFIWVRGTLPRYRYDKLMFLAWKSFLPLSL 298
Cdd:PRK06076  249 LITTLFLGGWLPPFPlgggipgaiwFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 7-306 6.24e-88

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 266.21  E-value: 6.24e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308   7 IMFLINYLLLIICVLISVAFLTLFERKILGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYMSPIINL 86
Cdd:MTH00054    2 GIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308  87 MVSLIIWVIFPYLT--YMCSFLYSFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIMLI 164
Cdd:MTH00054   82 TLAFIAWGVIPYGEgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCV 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308 165 GTYNISYYYYYQFNCWFIIFMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYASIMFMSML 244
Cdd:MTH00054  162 GSLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTF 241

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2473932308 245 ISLIFLGG----------DYFSFLFYLKVTTVSFMFIWVRGTLPRYRYDKLMFLAWKSFLPLSLNFFIFFLG 306
Cdd:MTH00054  242 GVILFLGGwlvisgptsyFSNFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSG 313
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 2-303 8.95e-88

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 265.83  E-value: 8.95e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308   2 MKYDFIMFLINYLLLIICVLISVAFLTLFERKILGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYMS 81
Cdd:MTH00216    1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308  82 PIINLMVSLIIWVIFPYL--TYMCSFLYSFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLS 159
Cdd:MTH00216   81 PVLSFTLALIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308 160 TIMLIGTYNISYYYYYQFN-CWFIIFMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYASI 238
Cdd:MTH00216  161 VLLCVGSLSITEIVLAQNNgIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2473932308 239 MFMSMLISLIFLGG-----DYF---SFLFYLKVTTVSFMFIWVRGTLPRYRYDKLMFLAWKSFLPLSLNFFIF 303
Cdd:MTH00216  241 ILMSCLTTILFLGGwlspiKYFkggAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIF 313
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 1-306 1.38e-73

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 229.90  E-value: 1.38e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308   1 MMKYDFIMFLINYLLLIICVLISVAFLTLFERKILGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYM 80
Cdd:MTH00029    1 MTIYSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308  81 SPIINLMVSLIIWVI--FPYLTYMCSFLYSFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILL 158
Cdd:MTH00029   81 APIISFTLAILAWAIvtMDQGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIII 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308 159 STIMLIGTYNISYYYYYQFNCWFIIFMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYASI 238
Cdd:MTH00029  161 SVILCVGSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNI 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308 239 MFMSMLISLIFLGG-----------------------DYFSFLFYLKVTTVSFMFIWVRGTLPRYRYDKLMFLAWKSFLP 295
Cdd:MTH00029  241 ILMSCMMTIFFLGGwlspldgiptppeafsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLP 320

                         330
                  ....*....|.
gi 2473932308 296 LSLNFFIFFLG 306
Cdd:MTH00029  321 LSLGLVILTAG 331
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 14-309 4.58e-64

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 203.59  E-value: 4.58e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308  14 LLLIICVLISVAFLTLFERKILGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYMSPIINLMVSLIIW 93
Cdd:MTH00090    3 LLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEW 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308  94 VIFPYLTYMCSFLYSFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIMligtYNISYYY 173
Cdd:MTH00090   83 FVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIML----HNNSFSF 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308 174 YYQFNCWFIIFMLPLFLccftSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYASIMFMSMLISLIFLGGD 253
Cdd:MTH00090  159 VSSFSLSLFVIYLPFLI----MIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFKFS 234

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2473932308 254 YFSFLFYLkvttvsFMFIWVRGTLPRYRYDKLMFLAWKSFLPLSLNFFIFFLGFKL 309
Cdd:MTH00090  235 FLMLFLIF------SLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 6-305 7.48e-53

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 175.11  E-value: 7.48e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308   6 FIMFLINYLLLIICVLIsVAFLTLFERKILGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYMSPIIN 85
Cdd:MTH00058    1 IFGLVSGLEGLLIILLL-VAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308  86 LMVSLIIWVIFPYLTYMCSFLYSFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIMLIG 165
Cdd:MTH00058   80 VLLVVFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYG 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308 166 TYNISYYYyyqFNCWFIIFMLPLFLCCFTSC-LAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYASIMFMSML 244
Cdd:MTH00058  160 SYSLVDFY---YSGWLSVLLFPLIYILWLVCiLCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWL 236

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2473932308 245 ISLIFLGGDYFSFLFYLKVttvsFMFIWVRGTLPRYRYDKLMFLAWKSFLPLSLNFFIFFL 305
Cdd:MTH00058  237 GSVLFFGGGFVSIMLLFHL----LFFMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVIV 293
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
14-298 1.66e-45

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 157.17  E-value: 1.66e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308  14 LLLIICVLISVAFLTLFERKILGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYMSPIINLMVSLIIW 93
Cdd:NF040610   17 LALIGAVFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLML 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308  94 VIFP----------YLTYMCSFLYSFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIML 163
Cdd:NF040610   97 VAIPfgaviingveYPLVVTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIM 176

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308 164 IGTYNISYYYYYQFNCWFIiFMLPL-FLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYASIMFMS 242
Cdd:NF040610  177 AGSLNIVEIVEAQSPIWFA-FLQPIgFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGS 255

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2473932308 243 MLISLIFLGGDYFSFL---------------FYLKVTTVSFMFIWVRGTLPRYRYDKLMFLAWKSFLPLSL 298
Cdd:NF040610  256 FLVVLLFLGGWNLPGFvtdipvlgiilptlfFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSL 326
ndhA CHL00032
NADH dehydrogenase subunit 1
 4-311 1.83e-34

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 128.53  E-value: 1.83e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308   4 YDFIMFLINYLLLIICVLISVAFLTLFERKILGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEmhNLFIS--NYFIYYMS 81
Cdd:CHL00032   24 YGLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKE--DLLPSrgDIRLFSIG 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308  82 PIINLMVSLIIWVIFP--YLTYMCSFLYSFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLS 159
Cdd:CHL00032  102 PSIAVISILLSYLVIPfgYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLS 181

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308 160 TIML---IGTYNI----SYYYYYQFNCW-----FIIFmlplflccFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGF 227
Cdd:CHL00032  182 ISLLsnsLSTVDIveaqSKYGFWGWNLWrqpigFIVF--------LISSLAECERLPFDLPEAEEELVAGYQTEYSGIKF 253

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308 228 TLIFLSEYASIMFMSMLISLIFLGGDYFS--FLFYLK---------------------VTTVSFMFIWV--RGTLPRYRY 282
Cdd:CHL00032  254 GLFYVASYLNLLVSSLFVTVLYLGGWNLSipYIFIPElfeinktggvfgttigifitlAKTYLFLFISIttRWTLPRLRM 333

                         330       340
                  ....*....|....*....|....*....
gi 2473932308 283 DKLMFLAWKSFLPLSLNFFIFFLGFKLLL 311
Cdd:CHL00032  334 DQLLNLGWKFLLPISLGNLLLTTSFQLLS 362
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
7-305 2.67e-26

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 105.27  E-value: 2.67e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308   7 IMFLINYLLLIICVLISVAFLTLFERKILGYIQIRKGPnkvgllGLPQPFADAIKLLNKEmHNLFISNYFIYYMSPIINL 86
Cdd:COG0650     1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKE-TVVPETASWLFRAAPYVAL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308  87 MVSLIIWVIFPYLTYMC--SFLYSFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIMLI 164
Cdd:COG0650    74 AAMLLAALLVPVLTTGPplSFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLA 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308 165 GTYNISYYYYYQFN---CWFIIFMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYASIMFM 241
Cdd:COG0650   154 GSTSLSDIVAYQAAhgpLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVL 233

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2473932308 242 SMLISLIFLGGDYFS------FLFYLKVTTVSFMFIWVRGTLPRYRYDKLMFLAWKSFLPLSLNFFIFFL 305
Cdd:COG0650   234 LSLFVNLFLPWGIALtlllalLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAVL 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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