|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
3.57e-151 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 428.86 E-value: 3.57e-151
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 1 MTPTTKLISTLSILLGTTITITSNHWAMAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSMINARH 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 81 TGQWDITQLTHPPACLLLTTAIATKLGLTPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPTLLTTMSIM 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 161 SITLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYVYILMTASIFLTMNTANISKLSTLMTSWTKTPML 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 241 STTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTTIISVASLLGLFFYLRLAYCSTITLPPNPSSKMKQWSTKNP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 2554488867 321 TNTLISVLTSLSISLLPLSPMIFTVT 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-324 |
1.66e-123 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 358.73 E-value: 1.66e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 1 MTPTTKLISTLSILLGTTITITSNHWAMAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSMINARH 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 81 TGQWDITQLTHPPACLLLTTAIATKLGLTPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSlNPTLLTTMSIM 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 161 SITLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYVYILMTASIFLTMNTANISKLSTLMTSWTKTPML 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 241 STTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTTIISVASLLGLFFYLRLAYCSTITLPPNPSSKMKQWSTKNP 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
....
gi 2554488867 321 TNTL 324
Cdd:MTH00135 320 QLTL 323
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
3.82e-123 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 357.69 E-value: 3.82e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 1 MTPTTKLISTLSILLGTTITITSNHWAMAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSMINARH 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 81 TGQWDITQLTHPPACLLLTTAIATKLGLTPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPTLLTTMSIM 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 161 SITLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYVYILMTASIFLTMNTANISKLSTLMTSWTKTPML 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 241 STTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTTIISVASLLGLFFYLRLAYCSTITLPPNPSSKMKQWSTKNP 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*
gi 2554488867 321 TNTLISVLTSLSISLLPLSPMIFTV 345
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILNL 345
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.84e-109 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 322.95 E-value: 1.84e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 1 MTPTTKLISTLSILLGTTITITSNHWAMAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSMINARH 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 81 TGQWDITQLTHPPACLLLTTAIATKLGLTPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPTLLTTMSIM 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 161 SITLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYVYILMTASIFLTMNTANISKLSTLMTSWTKTPML 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 241 STTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTTIISVASLLGLFFYLRLAYCSTITL-PPNPSSKMKQWSTKN 319
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMfPSTNNMKMKWQFENT 320
|
330 340
....*....|....*....|....*..
gi 2554488867 320 PTNTLISVLTSLSISLLPLSPMIFTVT 346
Cdd:MTH00105 321 KPMTLLPTLIILSTMLLPLTPMLSILE 347
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
5.83e-92 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 278.39 E-value: 5.83e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 1 MTPTTKLISTLSILLGTTITITSNHWAMAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSMINARH 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 81 TGQWDITQLTHPPACLLLTTAIATKLGLTPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPTLLTTMSIM 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 161 SITLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYVYILMTASIFLTMNTANISKLSTLMTSWTKTPML 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 241 STTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTTIISVASLLGLFFYLRLAYCSTITLPPNPSSKMKQWSTKNP 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 2554488867 321 TNTLISVLTSLSISLLPLSPMIFTVT 346
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
11-325 |
3.60e-84 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 258.71 E-value: 3.60e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 11 LSILLGTTITITSNHWAMAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSMINARHTGQWDITQLT 90
Cdd:MTH00041 11 TSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGPL 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 91 HPPACLLLTTAIATKLGLTPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPTLLTTMSIMSITLGGWMGL 170
Cdd:MTH00041 91 NTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGGWGGL 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 171 NQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYVYILMTASIFLTMNTANISKLSTLMTSWTKTPMLSTTLMLTLLS 250
Cdd:MTH00041 171 NQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFILSILS 250
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2554488867 251 LAGLPPLTGFLPKWLIIQELIKQEMTTTTTIISVASLLGLFFYLRLAYCSTITLPPNPSSKMKQWSTKNPTNTLI 325
Cdd:MTH00041 251 LGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGNITVYG 325
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-343 |
1.91e-58 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 191.96 E-value: 1.91e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 1 MTPTTKLISTLSILLGTTITITSNHWAMAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSMINARh 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 81 tgqwdITQLTHPPACLLLTTAIATKLGLTPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLlitSHSLNPTLLTTMSIM 160
Cdd:MTH00160 81 -----NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILL---SYLINNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 161 SITLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYVYILMTASIFLTMNTANISKLSTLMTSWTKTPML 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 241 STTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTTIISVASLLGLFFYLRLAYCSTITlppnpSSKMKQWSTKNP 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLML-----NYNKNKWNLKKK 307
|
330 340
....*....|....*....|...
gi 2554488867 321 TNTLISVLTSLSISLLPLSPMIF 343
Cdd:MTH00160 308 KNKFSLILNFLSFISLFGLILSS 330
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
13-318 |
2.01e-49 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 168.14 E-value: 2.01e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 13 ILLGTTITITSNHWAMAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSMINARHTGQWDITqlthp 92
Cdd:MTH00144 13 MVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSM----- 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 93 pacLLLTTAIATKLGLTPFHFWFPEVLQGSSLTTALLLSTIMKLPPttLLLITSHSLNPTLLTT---MSIMSITLGGWMG 169
Cdd:MTH00144 88 ---SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAP--LFLLSNFLDLYWLAYLlcvISVLSALVGSIGG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 170 LNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYVYILMTASIFLTMNTANISKLSTlMTSWTKTPMLSTTLMLTLL 249
Cdd:MTH00144 163 LNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKD-LGSLKPSYKTGLSIISLLL 241
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2554488867 250 SLAGLPPLTGFLPKWLIIQELIKQEMTTTTTIISVASLLGLFFYLRLAYCSTITLPPNPSSKMKQWSTK 318
Cdd:MTH00144 242 SLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSKKSNSSKVLNS 310
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
1-310 |
3.29e-47 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 162.64 E-value: 3.29e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 1 MTPTTKLISTlSILLGTTITITSNHWAMAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSminarh 80
Cdd:MTH00011 4 TFPTMFLFSS-TMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------ 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 81 TGQWDITQLTHPPACLLLTTAIATKLGLTPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPTLLTTMSIM 160
Cdd:MTH00011 77 TMMWSFPSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAM 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 161 SITLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYVYILMTASIFLTMNTANISKLSTLMTSWTKTPML 240
Cdd:MTH00011 157 SALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTT 236
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 241 STTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTTIISVASLLGLFFYLRLAYcSTITLPPNPSS 310
Cdd:MTH00011 237 SMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIF-NFMYLSPTFSS 305
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
11-313 |
2.82e-43 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 152.13 E-value: 2.82e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 11 LSILLGTTITITSNHWAMAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSMINARHTgqwditqLT 90
Cdd:MTH00197 5 FIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNL-------YL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 91 HPPACLLLTTAIATKLGLTPFHFWFPEVLQGSSLTTALLLSTIMKLPPttLLLITSHSLNPTLLTTMSIMSITLGGWMGL 170
Cdd:MTH00197 78 SLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAP--LLILAFNSSSFMGLLICSVLSSLIGGIGGM 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 171 NQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYVYILMTASIFLTMNTANISKLSTLMTSWTKTPMLSTTLMLTLLS 250
Cdd:MTH00197 156 NQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLS 235
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2554488867 251 LAGLPPLTGFLPKWLIIQELIKQEMTTTTTIISVASLLGLFFYLRLAYCSTITLPPNPSSKMK 313
Cdd:MTH00197 236 LGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLILSNWMINFLMK 298
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
10-298 |
1.79e-32 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 126.00 E-value: 1.79e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 10 TLSILLGTTITITSNHWAMAWAGLEINTLSIIPMIS-KSHHPRAIEAATKYFLVQAAASTLMLF-SSMINARhTGQWDIT 87
Cdd:COG1007 108 LLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYGA-TGSLNLA 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 88 QL--------THPP----ACLLLTTAIATKLGLTPFHFWFPEVLQGSSLTTALLLSTIMKL----PPTTLLLITSHSLNP 151
Cdd:COG1007 187 GIaaalaaggANSPllllGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaALLRLLVEAFPGLAA 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 152 ---TLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMI-IITYNPK-LTLLTFY--VYILMTASIFLTM----- 219
Cdd:COG1007 267 dwqLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLgLAAGTPLgVSAALFYllAYLFMNLGAFAVIlllsr 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 220 ---NTANISKLSTLmtsWTKTPMLSTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTTIISVASLLGLFFYLRL 296
Cdd:COG1007 347 kggEAEEIEDLAGL---ARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRV 423
|
..
gi 2554488867 297 AY 298
Cdd:COG1007 424 VK 425
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
5.96e-28 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 112.05 E-value: 5.96e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 13 ILLGTTITITSNHWAMAWAGLEINTLSIIPMI-SKSHHPRAIEAATKYFLVQAAASTLMLFS-------------SMINA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 79 RHTGQWDITQLTHPPACLLLTTAIATKLGLTPFHFWFPEVLQGSSLTTALLLSTIMKLppTTLLLITSHSLNPTLLTTMS 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKL--GIFSILVSIGLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 159 IMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNP----KLTLLTFYVYILMTASIF---LTMNTaNISKLSTLM 231
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFsiiLALNV-YKNLIIEFS 238
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2554488867 232 TSWTKTPMLSTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTTIISVASLLGLFFYLRL 296
Cdd:MTH00196 239 GLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-296 |
9.98e-28 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 112.99 E-value: 9.98e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 14 LLGTTITITSNHWAMAWAGLEINTLSIIPMIS-KSHHPRAIEAATKYFLVQAAASTLMLF-SSMINArHTGQWDITQL-- 89
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYgMSLLYG-ATGSLSFAGIak 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 90 ------THPP----ACLLLTTAIATKLGLTPFHFWFPEVLQGSSLTTALLLSTIMKL----PPTTLLLITSHSLNPT--- 152
Cdd:PRK05777 192 aladgsGNSLlllfGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaVLLRLLVVAFGGLSEDwqq 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 153 LLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMI---IITYNPKLTLLtFY--VYILMTASIF--LTM------ 219
Cdd:PRK05777 272 VLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVglaAGTAEGYSAVL-FYllAYLFMTLGAFgvISLlrrkgg 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2554488867 220 NTANISKLSTLmtSWTKtPMLSTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTTIISVASLLGLFFYLRL 296
Cdd:PRK05777 351 EAESISDFAGL--SKRS-PLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
5.07e-25 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 102.39 E-value: 5.07e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 23 SNHWAMAWAGLEINTLSIIPMI-SKSHHPRAIEAATKYFLVQAAASTLMLFSSMINARHTGQWDITQL--THPPAC---- 95
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskALTGGLnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 96 -----LLLTTAIATKLGLTPFHFWFPEVLQGSSLT-TALLLSTIMKLPPttLLLITSHSLNPT-------LLTTMSIMSI 162
Cdd:pfam00361 81 llllfLLILVGFLFKSAQVPFHTWLPDAYEGAPTPvSALLAATLVKAGG--YGLIRRSLLYLPsspfiqqILLILAIISM 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 163 TLGGWMGLNQTQTRKIMAFSSISHLGWMMIII----TYNPKLTLLTFYVYILMTASIFL--------TMNTANISKLSTL 230
Cdd:pfam00361 159 LLGSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLcagsviyrRVHTRNIRDYGGL 238
|
250 260 270
....*....|....*....|....*....|....*...
gi 2554488867 231 mtsWTKTPMLSTTLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:pfam00361 239 ---AKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
11-297 |
5.09e-23 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 99.25 E-value: 5.09e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 11 LSILLGTTITITSNHWAMAWAGLEINTLSI-IPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSMINARHTGQWDITQL 89
Cdd:TIGR01770 109 LFALLGIFLLVSSNDLLSIYLGLELQSLCFyVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 90 TH--------PPAC----LLLTTAIATKLGLTPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLL-------ITSHSLN 150
Cdd:TIGR01770 189 LLflsngmlnISLLllgiVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLrlflyilFGFSEAW 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 151 PTLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTL--LTFY--VYILMTASIFLTM------- 219
Cdd:TIGR01770 269 QIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIkaVLFYifIYALMSLGAFGVLsllrsyk 348
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 220 --NTANISKLSTLmtSWTKtPMLSTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTTIISVASLLGLFFYLRLA 297
Cdd:TIGR01770 349 deWIEYISDFAGL--FKTN-PILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
11-296 |
1.04e-21 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 95.47 E-value: 1.04e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 11 LSILLGTTITITSNHWAMAWAGLEINTLSIIPMIS-KSHHPRAIEAATKYFLVQAAASTLMLFSSMINARHTGQWDI--- 86
Cdd:MTH00199 104 LIVALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqgi 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 87 -TQLTHPPACLLLTTAIATKLGLTPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPTLLTtmSIMSITLG 165
Cdd:MTH00199 184 nSILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIC--AVLSIIYG 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 166 GWMGLNQTQTRKIMAFSSISHLGWMMIIITYNP----KLTLLTFYVYILMTASIFLTMNTANISK--LSTLMTSWTKTPM 239
Cdd:MTH00199 262 AIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSfesiQASLIYMIIYVIMSICSFSIILSLKLTKglIVEVSGLSRKNPV 341
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 2554488867 240 LSTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTTIISVASLLGLFFYLRL 296
Cdd:MTH00199 342 IALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
14-296 |
3.15e-19 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 87.90 E-value: 3.15e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 14 LLGTTITITSNHWAMAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSMINARHTGQWDITQLT--- 90
Cdd:COG0651 117 LAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAarl 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 91 ---HPP----ACLLLTTAIATKLGLTPFHFWFPEVLQGSSLTTALLLSTIM-KLPP----TTLLLITSHSLNP---TLLT 155
Cdd:COG0651 197 aelDPGlllaAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLtKVGVyailRVLTLLFGADPALflgTLLL 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 156 TMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYVYI----LMTASIFLT-------MNTANI 224
Cdd:COG0651 277 VLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLlnhaLAKALLFLAagaieraTGTRDL 356
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2554488867 225 SKLSTLmtsWTKTPMLSTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTTIISVASLLGLFFYLRL 296
Cdd:COG0651 357 DKLGGL---GKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
3-296 |
5.74e-18 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 84.91 E-value: 5.74e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 3 PTTKLISTLSILLGTTITITSNHWAMAWAGLEINTLSIIPMISKSHHPRAI---------EAATKYFLVQAAASTLMLFS 73
Cdd:MTH00198 187 PRSGFALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFG 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 74 SMINARHTGQ--------------WDITQLTHPPACLLLTTAIATKLGLTPFHFWFPEVLQGSSLTTALLLSTIMKLppT 139
Cdd:MTH00198 267 CALYFGFTGNegmlgtilsatletTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--T 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 140 TLLLITSHSLNPTLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMIII---TYNPKLTLLTFYVYILMTASIF 216
Cdd:MTH00198 345 VYILLTSLVITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVsagTYESLQASWTYAVTYLVSALAS 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 217 LTM----------------------NTANISKLSTLMTSWTKTPMLSTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQE 274
Cdd:MTH00198 425 FTVictleefgtrtptsrqrdgsfgNYNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIA 504
|
330 340
....*....|....*....|....*....
gi 2554488867 275 MTTTTTIISVASLLGL-------FFYLRL 296
Cdd:MTH00198 505 FSSSLSIYYLVALFAIictcisaFYYIRI 533
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-298 |
2.52e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 70.68 E-value: 2.52e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 33 LEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSMINARHTGQWDITQLTH--PPACLLLT------TAIAT 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGalAENPTVVTafgfvlLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 105 KLGLTPFHFWFPEVLQG-SSLTTALLLSTIMKLPPTTLLLITSHSLNP---------TLLTTMSIMSITLGGWMGLNQTQ 174
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAaPPVVTALLSGLVTKVAVYALIRIYFTVFGGdfrfalglgWLLAVLALLSMLVGSLAALGQDD 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 175 TRKIMAFSSISHLGWMMIIITYNPKLTLLTFYVYI----LMTASIFL-------TMNTANISKLSTLMTswtKTPMLSTT 243
Cdd:PRK08375 295 VKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLlhhaLMKGALFLaagaievTYGTRRLSELSGLGR---RMPLTAAA 371
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 2554488867 244 LMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTTIISVASLLGLFFYLRLAY 298
Cdd:PRK08375 372 FAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWY 426
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-263 |
2.99e-13 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 70.42 E-value: 2.99e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 51 RAIEAATKYFLVQAAASTLML--FSSM--INARHTGQWDI------TQLTHPPACLL----LTTAIATKLGLTPFHFWFP 116
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVygFSWLygLSGGEIELQEIvnglinTQMYNSPGISIalifITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 117 EVLQGSSLTTALLLSTIMK---LPPTTLLLITSHSLNPT----LLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGW 189
Cdd:CHL00049 239 DVYEGSPTPVVAFLSVTSKvaaSALATRIFDIPFYFSSNewhlLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGY 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 190 MMI-IITYNPKL---TLLTF-YVYILMTASIF-------LTMNTANISKLSTLmtsWTKTPMLSTTLMLTLLSLAGLPPL 257
Cdd:CHL00049 319 VIIgIIVGDSNDgyaSMITYmLFYIFMNLGTFacivlfgLRTGTDNIRDYAGL---YTKDPFLALSLALCLLSLGGIPPL 395
|
....*.
gi 2554488867 258 TGFLPK 263
Cdd:CHL00049 396 AGFFGK 401
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
2.63e-12 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 67.38 E-value: 2.63e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 50 PRAIEAATKYFLVQAAASTLMLF-SSMINARHTGQwdiTQLTH----------PPACLLLTTAIAT---KLGLTPFHFWF 115
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGS---TQLSAialalitspsLGLALALVFVIAGiafKISAVPFHQWT 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 116 PEVLQGSSLTTALLLSTIMKLPPTTL---LLITSHSLNPT----LLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLG 188
Cdd:PRK02504 234 PDVYEGSPTPVVAFLSVGSKAAGFALairLLVTAFPSFDEqwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAG 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 189 WMMI--IITYNPKLTLLTFY--VYILMTASIF-------LTMNTANISKLSTLmtsWTKTPMLSTTLMLTLLSLAGLPPL 257
Cdd:PRK02504 314 FVMIglVAGTEAGYASMVFYllAYLFMNLGAFacvilfsLRTGTDQISDYAGL---YQKDPLLTLGLSLCLLSLGGIPPL 390
|
....*.
gi 2554488867 258 TGFLPK 263
Cdd:PRK02504 391 AGFFGK 396
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
34-298 |
5.43e-12 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 66.56 E-value: 5.43e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 34 EINTLS---IIPMISKshhpRAIEAATKYFLVQAAASTLMLFSSMINARHTGQWDIT-------QLTHPP----ACLLLT 99
Cdd:PRK08668 128 EIMTFSsfmMVPMGKK----ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFAdisqgliNDTSTGfaliVFLFLL 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 100 TAIATKLGLTPFHFWFPE-----------VLQG--SSLTTALLLSTIMKLPPTTLLL----ITSHSLNPTLLTTMSIMSI 162
Cdd:PRK08668 204 AFGVAKAGIFPLHVWAPDayseapqsfsaVLSGqlSKLGAYGFLLVLYVLPGTKLFSefgtYRGVPLFNYILAWLGNISI 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 163 TLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLL--TFYVY---------ILMTASIFLTMNTANISKLSTLM 231
Cdd:PRK08668 284 IVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAggLFHVFnhalfkglfFLIFAAVIYRTGTTKISEMGGLI 363
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2554488867 232 TswtKTPMLSTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTTIISVASLLGLFFYLRLAY 298
Cdd:PRK08668 364 E---KMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFLYVFRPLA 427
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
38-291 |
3.27e-11 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 63.95 E-value: 3.27e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 38 LSIIPM---ISKSHHPRAIEAATKYFLVQAAASTLMLFSSMINARHTGQW--DITQLTHPP--------ACLLLTTAIAT 104
Cdd:COG1008 142 LMLIPMyflIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAAAPlpltaqllLFLAFFIAFAV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 105 KLGLTPFHFWFPEVLQGSSLTTALLLSTIMK-----------LPpttLLLITSHSLNPTLLTtMSIMSITLGGWMGLNQT 173
Cdd:COG1008 222 KVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLkmggygllrfaLP---LFPEASAYFAPLLAA-LGVIGIIYGALVALAQT 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 174 QTRKIMAFSSISHLGWMMI-IITYNPK-LTLLTFYV--YILMTASIFLT-------MNTANISKLSTLmtsWTKTPMLST 242
Cdd:COG1008 298 DLKRLIAYSSVSHMGFVLLgIFALNPLgLQGAVLQMvsHGLITAALFLLvgvlydrTHTRDIADLGGL---AKRMPVLAA 374
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 2554488867 243 TLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMT-----TTTTIISVASLLGLF 291
Cdd:COG1008 375 LFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWlailaALGLILTAAYLLWMY 428
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-292 |
7.77e-11 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 63.25 E-value: 7.77e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 48 HHPRAIEAATKYFLVQAAASTLMLFSSMINARHTGQWDITQLTH-----------PPACLLLTTAIATKLGLTPFHFWFP 116
Cdd:COG1009 156 EKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAaaptilsspllTLILLLLLLGAFGKSAQFPLHFWLP 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 117 EVLQGSSLTTALLLSTIMKlpptTL---LLITSH---SLNPTLLTTMSIM-SITL--GGWMGLNQTQTRKIMAFSSISHL 187
Cdd:COG1009 236 DAMEGPTPVSALLHAATMV----KAgvyLLARLSplfALSPVWLTVVAIIgAITAlfAALIALAQTDIKRVLAYSTVSQL 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 188 GWMMIIITynpkLTLLTFYVYILMT-----ASIFL-------TMNTANISKLSTLmtsWTKTPMLSTTLMLTLLSLAGLP 255
Cdd:COG1009 312 GYMFLALG----VGAYVAALFHLLThaffkALLFLgagsvihATGTRDIRKMGGL---RKKMPITAITFLIGALSLAGIP 384
|
250 260 270
....*....|....*....|....*....|....*..
gi 2554488867 256 PLTGFLPKWLIIQELIkqEMTTTTTIISVASLLGLFF 292
Cdd:COG1009 385 PFAGFFSKEAILEAAL--EAGGLGPLLLAVALLGAFL 419
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
7.63e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 60.11 E-value: 7.63e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 33 LEINTLSIIPMIS-KSHHPRAIEAATKYFLVQAAASTLMLFS-SMINARH---TGQWDITQLTHPPACL------LLTTA 101
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGiALLYGQYgtlNMAYLAVKMSENPTVVakialaLFIAG 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 102 IATKLGLTPFHFWFPEVLQG--SSLTTALLLSTIMKLPPTTLLLITSHSLNPTLLTTMSIMSI------TLGGWMGLNQT 173
Cdd:PRK08376 230 LAMKSGAVPVHMWLPDAYPAapSSISAMLLVIKQAGLYALARVLFSIYGPAINLATVGWVIIIlgcltmFVGVAMAVVQK 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 174 QTRKIMAFSSISHLGWMMI-----IITYNPklTLLTFYVYILMTASIFLTMN--------------------TANISKLS 228
Cdd:PRK08376 310 DVKRLLAYHSVSQIGYMLLglgvgLAALGD--PAMASYGEIALAGGIYHIVNhalykallfltagaviyetgTRNLNELG 387
|
250 260 270
....*....|....*....|....*....|....*...
gi 2554488867 229 TLMTswtKTPMLSTTLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK08376 388 GLAR---TMPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
55-263 |
2.20e-09 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 58.78 E-value: 2.20e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 55 AATKYFLVQAAASTLMLFSSMINARHTGQWDITQL-THPPACLLLTTAIA-------TKLGLTPFHFWFPEVLQGSSLTT 126
Cdd:PRK12644 158 AALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELlADPPTGPAVSVAVVlilvgalSKSAIVPFHFWLPGAMAAPTPVS 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 127 ALLLSTIM---------KLPPTtllLITSHSLNPTLLTtMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYN 197
Cdd:PRK12644 238 AYLHAAAMvkagiylvaRLAPG---FADVPVWRPTVLV-LGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIG 313
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2554488867 198 PK------LTLLTfyVYILMTASIFLTMN-------TANISKLSTLmtsWTKTPMLSTTLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12644 314 TRdaalagLAMLL--AHALFKAALFLVVGiidhstgTRDIRKLSGL---GRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
1.14e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 56.76 E-value: 1.14e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 48 HHPRAIEAATKYFLVQAAASTLMLFSSMINARHTGQWDITQLTHPPACL--------------LLTTAIATKLGLTPFHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIenikghplflitliLIFIGAAAKSAQGPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 114 WFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPT-----LLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLG 188
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 189 WMMIIITYN----PKLTLLTFYVYIL----MTASIFLTMN-------TANISKLSTLMtswTKTPMLSTTLMLTLLSLAG 253
Cdd:PRK12649 316 YLMTMYGYTtyhePGLGVAAATFHLLnhatFKACLFLVAGivaheaaTRDIRKLGGLR---KEMPITFIVASIAALAMAG 392
|
250
....*....|
gi 2554488867 254 LPPLTGFLPK 263
Cdd:PRK12649 393 IPPLNGFLSK 402
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-291 |
3.43e-08 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 54.95 E-value: 3.43e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 50 PRAIEAATKYFLVQAAASTLMLFSSMINA-RHTGQWDITQLTHPPACLLLTT--------AIATKLGLTPFHFWFPEV-L 119
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYfLGGGTFDLLELLNLPLPFGVQTwlflaffiAFAVKVPLFPLHTWLPDAhV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 120 QGSSLTTALLLSTIMKLPPTTLLLI-------TSHSLNPtLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMI 192
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTYGFLRFnlplfpdASLYFAP-VLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 193 -IITYNPKLTLLTFYVYI---LMTASIFLT-------MNTANISKLSTLmtsWTKTPMLSTTLMLTLLSLAGLPPLTGFL 261
Cdd:TIGR01972 311 gIFSFNELGISGAVFQMIshgLITAALFLLvgvlyerAHTRDIAKYGGL---ANKMPVLAAFFMLFAMASLGLPGTSGFV 387
|
250 260 270
....*....|....*....|....*....|....*
gi 2554488867 262 PKWLIIQELIKQEMTTT-----TTIISVASLLGLF 291
Cdd:TIGR01972 388 GEFLILLGSFKVNPVVAflaalGIVLAAAYMLTLY 422
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
38-194 |
8.43e-08 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 53.67 E-value: 8.43e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 38 LSIIPM---ISKSHHPRAIEAATKYFLVQAAASTLMLFSSM----INARHTGQWDITQLTHPPACLLLTT--------AI 102
Cdd:PRK05846 142 AMLIPMyflIGVWGGKNRIYAATKFFLYTLLGSLLMLVAIIylvvVYYNATGTFDIADLLNLPLPPGVQYwlflaffiAF 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 103 ATKLGLTPFHFWFPEVLQ-----GSSLTTALLLST-------IMkLPpttLLLITSHSLNPtLLTTMSIMSITLGGWMGL 170
Cdd:PRK05846 222 AVKMPMFPLHTWLPDAHVqaptaGSVLLAGILLKMgaygllrFS-LP---LFPDASHEFAP-IIITLGVIAIIYGALVAL 296
|
170 180
....*....|....*....|....
gi 2554488867 171 NQTQTRKIMAFSSISHLGWMMIII 194
Cdd:PRK05846 297 AQTDIKKLIAYSSISHMGFVTLGI 320
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-210 |
1.16e-07 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 53.22 E-value: 1.16e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 13 ILLGTTITITSNHWAMAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAA------STLMLFSSMINARHTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 87 TQLTH-----PPACLLLT-----TAIATKLGLTPFHFWFPEV-LQGSSLTTALLLSTIMKLPPTTLLLITS-------HS 148
Cdd:PRK08676 191 TELAAhasllSPSVLGASflfifIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSAllrqsgaAE 270
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2554488867 149 LNPTLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYVYIL 210
Cdd:PRK08676 271 QFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHML 332
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
20-190 |
1.33e-07 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 53.01 E-value: 1.33e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 20 TITSNHWAMAWAGLEINTLSIIPMISKSHHPRAIEAATKYF---------------LVQAAASTL-------MLFSSMIN 77
Cdd:PRK06458 124 ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIiicsvgvafalfgtiLVYANAATVmgdgemaILWTELLK 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 78 ARHTGQWDITQLthppACLLLTTAIATKLGLTPFHFWFPE-----------VLQGSSLTTAL---------LLSTIMKLP 137
Cdd:PRK06458 204 HASLLDPTLMKL----AFVFLLIGFGTKVGLFPMHAWLPDahseapspvsaLLSGVLLNVALyavlryyilIDAAIGSDF 279
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 2554488867 138 PTTLLLItshslnptllttMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWM 190
Cdd:PRK06458 280 PGRLLLI------------FGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLI 320
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
92-289 |
3.41e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 51.84 E-value: 3.41e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 92 PPACLLLTTAIATKLGLTPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPT-----LLTTMSIMSITLGG 166
Cdd:PRK12647 195 LAILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTplwqtILPLFGGLTMLTGA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 167 WMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYVYI----LMTASIFLT-------MNTANISKLSTLmtsWT 235
Cdd:PRK12647 275 LLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLvahsLYKGALFMVagiidheTGTRDITKLGGL---RR 351
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 2554488867 236 KTPMLSTTLMLTLLSLAGLPPLTGFLPKWLIIQELIkqEMTTTTTIISVASLLG 289
Cdd:PRK12647 352 AMPITAAAALLAALSMAGLPPLFGFLAKELIYEALL--EAPLWSLILTVAAVLG 403
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
29-263 |
9.00e-07 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 50.81 E-value: 9.00e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 29 AWaglEINTLSIIPMISKSHhPRAIEAATKYFLVQAAASTLMLFSSMINARHTGQWDITQLTHPPA-----------CLL 97
Cdd:PRK12650 138 AW---ELVSLASFFLIARSG-SGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVwaekpglttvvAVL 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 98 LTTAIATKLGLTPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITS--HSLNPT---LLTTMSIMSITLGGWMGLNQ 172
Cdd:PRK12650 214 IAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSpvFHDVAVwnwLLIIVGMITALMGAVFAVQK 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 173 TQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYVYI----LMTASIFLTMN-------TANISKLSTLmtsWTKTPMLS 241
Cdd:PRK12650 294 TDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTlahaLFKSSLFMLIGvvdhqagTRDIRRLGSL---WRRMPFTF 370
|
250 260
....*....|....*....|..
gi 2554488867 242 TTLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12650 371 VSVTIAALSMAAVPPLFGFVSK 392
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-308 |
7.13e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 47.72 E-value: 7.13e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 34 EINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSMINARHTGQWDITQL--------THPP---ACLLLTTAI 102
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDIhnallvnpTSPViygGLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 103 ATKLGLTPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLIT-----SHSLNP---TLLTTMSIMSITLGGWMGLNQTQ 174
Cdd:PRK06277 210 LYGSGLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIfklfgGLSYFPsaqGVLIALSVLAMVFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 175 TRKIMAFSSISHLGWMMIIITYNPKLTLLT--FYV--YILMTASIFL-------TMNTANISKLSTLMTSwtkTPMLSTT 243
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGIVAgiFHAinHVIYKSALFLgagivsyRTKTSNLRKLGGLLPV---MPVVAFM 366
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2554488867 244 LMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTTIISVASLLGLFFYLRLAYcsTITLPPNP 308
Cdd:PRK06277 367 VLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFY--LIYLKPKP 429
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
92-296 |
1.32e-05 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 47.06 E-value: 1.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 92 PPACLLLTTAIATKLGLTPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPT-----LLTTMSIMSITLGG 166
Cdd:PRK12646 210 IPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSnmyiyIVTFVGLITMLFGS 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 167 WMGLNQTQTRKIMAFSSISHLGWMMIII------TYNPKLTLLTFYVYILMtASIFLTMN-------------------- 220
Cdd:PRK12646 290 ITALKQWDLKGILAYSTISQLGMIMAMVgigggyAQHQQDAIASIYVFVLF-AALFHLMNhaifkcalfmgvgiidheag 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 221 TANISKLSTLMTSWtktPMLSTTLMLTLLSLAGLPPLTGFLPKWLIIQELIK--------QEMTTTTTIISV-ASLLGLF 291
Cdd:PRK12646 369 TRDIRILSGMRQLF---PKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQtgqlsqfsLISMIIIVFIGViASIFTFT 445
|
....*
gi 2554488867 292 FYLRL 296
Cdd:PRK12646 446 YALYM 450
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-194 |
2.37e-05 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 45.79 E-value: 2.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 55 AATKYFLVQAAASTLMLFSSMINARHTGQ--WDITQLT--HPPACLLLTT------AIATKLGLTPFHFWFPEVL-QGSS 123
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGakSYPLALELLLyagfliAFGVKLPIFPLHTWLPDAHgEASA 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2554488867 124 LTTALLLSTIMKLPPTTL------LLITSHSLNPTLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMIII 194
Cdd:PRK12561 218 PVSMILAGVLLKMGGYALirfnvqMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGI 294
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
95-311 |
3.55e-05 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 45.45 E-value: 3.55e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 95 CLLLTTAIATKLGLTPFHFWFPEVLQGSSLTTALLLSTIMkLPPTTLLLITSHSL---NPTLLTTMSI---MSITLGGWM 168
Cdd:MTH00020 213 CLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATM-VTAGVFLLIRSSPLfeqAPLALIIVTIvgsLTVFFAATV 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 169 GLNQTQTRKIMAFSSISHLGWMMIII-TYNPKLTLLTFYVYILMTASIFLTMNTA--------NISKLSTLMTSwtkTPM 239
Cdd:MTH00020 292 GLVQNDLKKVIAYSTCSQLGYMVVACgLSHYSISLFHLMNHAFFKALLFLSAGSVihalsdeqDMRKMGGLISF---LPL 368
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2554488867 240 LSTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQE-MTTTTTIISVASLLGLFFYLRLAYCSTITlppNPSSK 311
Cdd:MTH00020 369 TYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYyLIFAYWLGCFSALLTAFYSIRLIYLTFLS---NTNLK 438
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-296 |
5.87e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 44.72 E-value: 5.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 33 LEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSMINARHTGQWDITQL-----------THPPACLLLTTA 101
Cdd:PRK12662 139 LEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMfliiqdlptnrAIQIGVLFIMVG 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 102 IATKLGLTPFHFWFPEVLQG---------SSLTTALLLSTIMKLPPTTL---LLITSHSLNpTLLTTMSIMSITLGGWMG 169
Cdd:PRK12662 219 LFIKAALFPFHKWLIQAYSEapsfisvffSGTSTKVMIYLIIRIVYDVFkanFVFTTLPFN-NVFMILAALAIVFGSVLA 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 170 LNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYVYI----LMTASIFLTM-------NTANISKLSTLmtsWTKTP 238
Cdd:PRK12662 298 ILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIvnhsIVKSALFMVSgsisyhfGTTKLEDCLNL---WKSMP 374
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 2554488867 239 MLSTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTTIISVASLLGLFFYLRL 296
Cdd:PRK12662 375 KITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKI 432
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
59-290 |
1.58e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 43.57 E-value: 1.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 59 YFLVQAAASTLMLFSSMINA-RHTGQWDITQLTHPPAC-----LLLTTAIATKLGLTPFHFWFPEVLQGSSLTTALLLST 132
Cdd:PRK08667 166 FYFVMTQLSTVFLMLGIIVLfIQTGSFELSPLGASAGIlslvfLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSG 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 133 IM-KLPPTTLLLITSHSLNP-----TLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLG--------WMMIIITYNP 198
Cdd:PRK08667 246 VMlKVAVYGLVRFLMDVLSPelwwgVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGiilmgiglYVIFGVYGLD 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 199 KLTLLT-------------FYVYILMTA-SIFLTMNTANISKLSTLMTSwtkTPMLSTTLMLTLLSLAGLPPLTGFLPKW 264
Cdd:PRK08667 326 TLALLAlggalfhslnhalFKSLLFLTAgSVVHATGTRNIEKMGGLVKL---MPYTSALFLVGAVSIAALPPFNGFASEL 402
|
250 260 270
....*....|....*....|....*....|
gi 2554488867 265 LIIQELIKQEMTTTTTI----ISVASLLGL 290
Cdd:PRK08667 403 LLYESFFQSFSVADPLIkillFSVLAIFAL 432
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
103-268 |
3.14e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 42.64 E-value: 3.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 103 ATKLGLtpfHFWFPEVLQGSSLTTALLLSTIMkLPPTTLLLITSHSLNPTLLTTMSIMSIT------LGGWMGLNQTQTR 176
Cdd:MTH00032 239 SAQLGL---HTWLPDAMEGPTPVSALIHAATM-VTAGVFLMIRSFPLFEKAPLTLLIITIFgaltafFAATVGLVQNDLK 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 177 KIMAFSSISHLGWMMIIITYNPKLTLLTFYV--YILMTASIFL---------TMNTANISKLSTLMTSwtkTPMLSTTLM 245
Cdd:MTH00032 315 KVIAYSTCSQLGYMVLIIGIEGSHNVGLFHLvnHAFFKALLFLsagsvihstTVDEQDMRKMGGLIHS---IPFTYTMML 391
|
170 180
....*....|....*....|...
gi 2554488867 246 LTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00032 392 IGSFSIMGLPYLTGFYSKDLILE 414
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
53-296 |
3.83e-04 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 42.24 E-value: 3.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 53 IEAATKYFLVQAAASTLMLFSSMINARHTGQWDITQL-----------THPPACLLLTTAIATKLGLTPFhFWFPEVLQG 121
Cdd:PRK12663 157 LRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIamrlndmgdtaTLTTIALLFLLAFGMKAALFPF-MWLPAAYHT 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 122 SSLTTALLLSTIMK-------LPPTTLLLITSHSLNPTLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMIII 194
Cdd:PRK12663 236 PNTEVAALFAALLTkvgiyalIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGL 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 195 TYNPKLTL--LTFY---VYILMTASIFLTMNTANIS---KLSTLMTSWTKTPMLSTTLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK12663 316 ALGTPAGIngAIFYlvhDMVVKTALFLIAGSLVRLTgyrSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLL 395
|
250 260 270
....*....|....*....|....*....|
gi 2554488867 267 IQELIKQEMTTTTTIISVASLLGLFFYLRL 296
Cdd:PRK12663 396 VQGALDNGAYILLALMLITSLITMYSLFRI 425
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
7.68e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 41.09 E-value: 7.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 33 LEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSMINARHTGQWDITQLTH--PPACLLLTTAIATKLGLTP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 111 FHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPT--LLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLG 188
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLdlIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLG 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 189 WMMIIITYNPKLTLltfyVYILMTASIFL---TMNTANISKL-STLMTSWTKTPmlsttLMLTLLSLAGLPPLTGFLPKW 264
Cdd:PRK07234 283 FILAAPLVGGLYAL----AHGLVKSTLFLcagALPSRNFTELiSQMLGIGKWIP-----LTMASFSIAGFPLLAGFVSKV 353
|
....*..
gi 2554488867 265 LIIQELI 271
Cdd:PRK07234 354 LTLKNLL 360
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
103-296 |
7.80e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 41.09 E-value: 7.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 103 ATKLGLTPFHFWFPEVLQG-----SSLTTALL----LSTIMKLppTTLLLITSHSLNPTLLTTMSIMSITLGGWMGLNQT 173
Cdd:PRK07691 220 ATKAGLFPLYFWLPGSYYAppiaiAALFGALLtkvgVYAIART--FTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYF 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 174 QTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYVY----ILMTASIFLTM-------NTANISKLSTLMTSWtktPMLST 242
Cdd:PRK07691 298 DIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYlihdMIVKAALFLLIgimikitGTTDLKKMGGLIKRY---PVLGW 374
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 2554488867 243 TLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTTIISVASLLGLFFYLRL 296
Cdd:PRK07691 375 MFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
14-192 |
9.90e-04 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 40.84 E-value: 9.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 14 LLGTTITITSNHWAM---AWAGLEI---NTLSIIPmisksHHPRAIEAATKYFLVQAAASTLMLFSSMINARHTGQWDIT 87
Cdd:PRK08168 110 LAAVHLLVLSDHLLVliaAWAAISLalhRLLCFYP-----DRPFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLS 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 88 QL--------THPP---ACLLLTTAIATKLGLTPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTL-----LLITSHSLNp 151
Cdd:PRK08168 185 ALwahlaaqgASPSlqaAALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVVNLGGFVLirfapLLEQAPPAR- 263
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 2554488867 152 TLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMI 192
Cdd:PRK08168 264 WLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLL 304
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
96-268 |
1.09e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 40.85 E-value: 1.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 96 LLLTTAI----ATKLGLTPFHFWFPEVLQGSSLTTALLLSTIM-KLPPTTLLLI-------TSHSLNPTLLTTMSImSIT 163
Cdd:PRK07363 205 LILLTGLllgfGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLaKLGTYGLLRFglqlfpqTWSLVAPGLAIIGTI-SVI 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 164 LGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLL----TFYVYILMTASIF-------LTMNTANISKLSTLMT 232
Cdd:PRK07363 284 YGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLgavaQMISHGLILALLFhlvgiveRKVGTRDLDVLNGLMN 363
|
170 180 190
....*....|....*....|....*....|....*.
gi 2554488867 233 SWTKTPMLSTTLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK07363 364 PIRGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQ 399
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
98-266 |
1.53e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 40.07 E-value: 1.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 98 LTTAIATKLGLTPFHFWFPEV-LQGSSLTTALLLSTIMKLPPTTLL------LITSHSLNPTLLTTMSIMSITLGGWMGL 170
Cdd:PRK06473 211 ILVGFGIKIPLVPFHTWLPDAhVEASTPVSVLLAGVLLKLGTYGLLrfgvglFPEAWVYLAPWLATWAVVSVLYGASCAI 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 171 NQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYVYI----LMTASIFLTM-------NTANISKLSTLMTSWTKTPM 239
Cdd:PRK06473 291 AQKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMishgLISALLFLLVgvvykktGSRDVDVLRGLLNPERGLPI 370
|
170 180
....*....|....*....|....*..
gi 2554488867 240 LSTTLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK06473 371 TGSLMILGVMASAGIPGMVGFIAEFLV 397
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-268 |
1.95e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 39.95 E-value: 1.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 96 LLLTTAIATKLGLTPFHFWFPEVL-QGSSLTTALLLSTIMK-----LPPTTLLLITSHSLNpTLLTTMSIMSITLGGWMG 169
Cdd:PRK12665 213 AVLLVAFGIKAAVFPLSFWLPDSYpTAPAPVTAVFAGLLTKvgvyaIIRTHTLLFPGGGLD-TLLMVVALLTMVVGILGA 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 170 LNQTQTRKIMAFSSISHLGWMMIIITYNPKLTL--LTFYV--YILMTASIFLTMN-------TANISKLSTLMTSwtkTP 238
Cdd:PRK12665 292 IAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLsgAIYYVahHITVQTTLFLVVGlierqagSSSLRRLGGLAKA---SP 368
|
170 180 190
....*....|....*....|....*....|
gi 2554488867 239 MLSTTLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK12665 369 LLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-227 |
2.15e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 39.90 E-value: 2.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 101 AIATKLGLTPFHFWFPEVLQGSSLTTALLLSTI-MKLPPTTLLLIT-------SHSLNPTLLtTMSIMSITLGGWMGLNQ 172
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGIlLKLGGYGLVRLSwpilplgAQNLAPAVI-AMGIVGIVYGSFATCRQ 317
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 2554488867 173 TQTRKIMAFSSISHLGWMMIiitynpklTLLTFYVyILMTASIFLTMNTANISKL 227
Cdd:MTH00226 318 IDVKRLVAYSSVAHMGLVSI--------TLVTHDI-IGLTGSIFIMLAHGIVSSL 363
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
95-300 |
3.52e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 39.24 E-value: 3.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 95 CLLLTTAIATKLGLTPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPTLLTTMSIMSIT-----LGGWMG 169
Cdd:MTH00209 178 SVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLLLLGslttlMASMSA 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 170 LNQTQTRKIMAFSSISHLGWMMIIITYN-PKLTLLTFYVYILMTASIFLT--------MNTANISKLSTLmtsWTKTPML 240
Cdd:MTH00209 258 NVESDLKKIIALSTLSQLGLMMCSLGLNqPELAFFHLITHALFKALLFICagniihshGHSQDIRMVGNL---WYQMPIT 334
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2554488867 241 STTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTTIISVASL-LGLFFYLRLAYCS 300
Cdd:MTH00209 335 SICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTsLTAAYSMRLSYFS 395
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
107-272 |
4.70e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 38.65 E-value: 4.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 107 GLTPFHFWFPEVLQGSSLTTALLLSTI-MKLPPTTLLLITSHSLNPTL-----LTTMSIMSITLGGWMGLNQTQTRKIMA 180
Cdd:PRK08042 195 GIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAPLwwgvaLLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 181 FSSISHLGWMMI--------IITYNPKLTLLTFY--------------VYILMTASIFLTMNTANISKLSTLmtsWTKTP 238
Cdd:PRK08042 275 YHTLENIGIILLglgagvtgIALEQPALIALGLVgglyhllnhslfksVLFLGAGSVWFRTGHRDIEKLGGI---GKKMP 351
|
170 180 190
....*....|....*....|....*....|....
gi 2554488867 239 MLSTTLMLTLLSLAGLPPLTGFLPKWLIIQELIK 272
Cdd:PRK08042 352 VISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
82-268 |
4.95e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 38.59 E-value: 4.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 82 GQWDITQLTHPPACLLLTTAIA----TKLGLTPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLL------LITSHSLNP 151
Cdd:MTH00207 165 GHWSITNMWQTDMNNYIALSIMiaamTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLirfypfLSSTYWFNP 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 152 TLLTTMSiMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYN-PKLTLLTFYVYILMTASIFLTMNTA-----NIS 225
Cdd:MTH00207 245 ALLLTAS-LTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGmPKLALFHLITHALFKALLFVCAGSLihshhHSQ 323
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 2554488867 226 KLSTLMTSWTKTPMLSTTLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00207 324 DLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILE 366
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
53-188 |
6.42e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 38.12 E-value: 6.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488867 53 IEAATKYFLVQAAASTLMLFSSMINARHTGQWDITQLTHP--PACLLLTTAI------ATKLGLTPFHFWFPEVLQGSSL 124
Cdd:MTH00204 162 VRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIklPLSIQKWLLVgfflslAVKIPQIPFHIWLPQAHVEAPV 241
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90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2554488867 125 TTALLLSTI-MKLPPTTLLLIT-------SHSLNPtLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLG 188
Cdd:MTH00204 242 AGSVILAGIlLKLGGYGFLRFSwplfpaaSEYFAP-LIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMG 312
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