|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-462 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 689.24 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 1 MLKIILPTIMLLPTTLLSPPKLMWTNTTMYSLLIATLSLQWLTPSYYPYKNLTQWTGIDQTSSPLLTLSCWLTPLMILAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 81 QNHLQHEPPARKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRWGSQPERLSAGIYFLFYTLISSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 161 LIAILYLNSQTGTLYFPTLKLhpysTQLTPTKYWSALLLNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLL 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQL----THPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 241 KLGGYGIMRITCLTNPPANNLlHYPFITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMIL 320
Cdd:MTH00124 237 KLGGYGIIRITLLLPPLSNTL-HYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMIL 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 321 MISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMAALFNWSTPTILL 400
Cdd:MTH00124 316 MIAHGLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIIL 395
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2554488875 401 TGVATLLTAAYTLFMLTSTQRGTLPPHITTLQNSTTREHLLMTLHLLPMLLLILKPELISGP 462
Cdd:MTH00124 396 TGLATLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-461 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 549.90 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 1 MLKIILPTIMLLPTTLLSPPKLMWTNTTMYSLLIATLSLQWLTPSYYPYKNLTQWTGIDQTSSPLLTLSCWLTPLMILAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 81 QNHLQHEPPARKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRWGSQPERLSAGIYFLFYTLISSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 161 LIAILYLNSQTGTLYFPTLKLHPYSTQLTptkyWSALLLNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLL 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMT----YTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 241 KLGGYGIMRITCLTNPPANNLLhYPFITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMIL 320
Cdd:MTH00068 237 KLGGYGILRISILLTPLSKELS-YPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIIL 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 321 MISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMAALFNWSTPTILL 400
Cdd:MTH00068 316 MISHGLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILI 395
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2554488875 401 TGVATLLTAAYTLFMLTSTQRGTLPPHITTLQNSTTREHLLMTLHLLPMLLLILKPELISG 461
Cdd:MTH00068 396 TGLGTLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISG 456
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-463 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 548.72 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 1 MLKIILPTIMLLPTTLLSPPKLMWTNTTMYSLLIATLSLQWLTPSYYPYKNLTQWTGIDQTSSPLLTLSCWLTPLMILAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 81 QNHLQHEPPARKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRWGSQPERLSAGIYFLFYTLISSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 161 LIAILYLNSQTGTLYFPTLKLhpYSTQLTPTkyWSALLLNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLL 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQL--WAQPLPNS--WSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 241 KLGGYGIMRITCLTNPPANNLLhYPFITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMIL 320
Cdd:MTH00110 237 KLGGYGMMRITIILNPLTEFMA-YPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATAL 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 321 MISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMAALFNWSTPTILL 400
Cdd:MTH00110 316 MIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIIL 395
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2554488875 401 TGVATLLTAAYTLFMLTSTQRGTLPPHITTLQNSTTREHLLMTLHLLPMLLLILKPELISGPL 463
Cdd:MTH00110 396 MGLNMLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPT 458
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-461 |
1.67e-157 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 454.03 E-value: 1.67e-157
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 1 MLKIILPTIMLLPTTLLSPPKLMWTNTTMYSLLIATLSLQWLT-PSYYPYKNLTQWTGIDQTSSPLLTLSCWLTPLMILA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKnLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 80 SQNHLQHEPPARKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRWGSQPERLSAGIYFLFYTLISSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 160 LLIAILYLNSQTGTLYFPTLKLhpysTQLTPTKYWSALLLNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALL 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQY----SQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 240 LKLGGYGIMRITCLTNPPANNLLhYPFITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMI 319
Cdd:MTH00127 237 LKLGGYGMMRMMVMLDPLTKELS-YPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALI 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 320 LMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMAALFNWSTPTIL 399
Cdd:MTH00127 316 LMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLA 395
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2554488875 400 LTGVATLLTAAYTLFMLTSTQRGTLPPHITTLQNSTTREHLLMTLHLLPMLLLILKPELISG 461
Cdd:MTH00127 396 LTGLGTLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWG 457
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-459 |
1.61e-152 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 440.92 E-value: 1.61e-152
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 3 KIILPTIMLLPTTLLSPPKLMWTNTTMYSLLIATLSLQWLTPSY-YPYKNLTQWTGIDQTSSPLLTLSCWLTPLMILASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSeVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 82 NHLQHEPPARKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRWGSQPERLSAGIYFLFYTLISSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 162 IAILYLNSQTGTLYFPtlkLHPYSTQLTptkyWSALLLNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLK 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLY---ILYFSKLTT----WNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLK 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 242 LGGYGIMRITCLTNPPANNLLhYPFITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILM 321
Cdd:MTH00206 234 LGGYGMMRIILILGPSTKLSS-YFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLM 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 322 ISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMAALFNWSTPTILLT 401
Cdd:MTH00206 313 IAHGLVSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLL 392
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 2554488875 402 GVATLLTAAYTLFMLTSTQRGTLPPHITTLQNSTTREHLLMTLHLLPMLLLILKPELI 459
Cdd:MTH00206 393 GLGFLFTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-438 |
7.39e-137 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 401.28 E-value: 7.39e-137
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 1 MLKIILPTIMLLPTTLLSPPKLMWTNTTMYSLLIATLSLQWLTPSYY-PYKNLTQWTGIDQTSSPLLTLSCWLTPLMILA 79
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSsSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 80 SQNHLQHEPPARKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRWGSQPERLSAGIYFLFYTLISSLP 159
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 160 LLIAILYLNSQTGTLYFPTLKLHPYSTQLTPtkywSALLLNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALL 239
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSN----SSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAIL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 240 LKLGGYGIMRITCLTNPPANNLLHYPFITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMI 319
Cdd:MTH00044 237 LKLGGYGLIRLINLFSLPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALI 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 320 LMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMAALFNWSTPTIL 399
Cdd:MTH00044 317 LMIAHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFP 396
|
410 420 430
....*....|....*....|....*....|....*....
gi 2554488875 400 LTGVATLLTAAYTLFMLTSTQRGTLPPHITTLQNSTTRE 438
Cdd:MTH00044 397 IIGLATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSRE 435
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-438 |
8.27e-112 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 336.74 E-value: 8.27e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 1 MLKIILPTIMLLPttlLSPPKLMWtNTTMYSLLIATLSLQWLTPSYYPYKNLTQWTGIDQTSSPLLTLSCWLTPLMILAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIP---LCFLKNSW-WLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 81 QNHLQHEPPARKRIFMTTLIVVqpLIIMAFSTTELTTFYISFEATLIPTLILITRWGSQPERLSAGIYFLFYTLISSLPL 160
Cdd:MTH00163 77 ESVYKKNNYSNLFLFLILFLLI--FLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 161 LIAILYLNSQTGTLYFPTLKLhpystqltptKYWSALLLNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLL 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLLNF----------FGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLL 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 241 KLGGYGIMRITCLTNPpANNLLHYPFITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMIL 320
Cdd:MTH00163 225 KLGGYGLLRVMSFFSK-LGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLM 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 321 MISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMAALFNWSTPTILL 400
Cdd:MTH00163 304 MIGHGLCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIF 383
|
410 420 430
....*....|....*....|....*....|....*...
gi 2554488875 401 TGVATLLTAAYTLFMLTSTQRGTLPPHITTLQNSTTRE 438
Cdd:MTH00163 384 LMLLSFFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVRE 421
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-460 |
5.87e-104 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 317.07 E-value: 5.87e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 1 MLKIILPTIMLLPTTLLSPpKLMWTNTTMYSLLIATLSLQWLTPSYYPYKNLTQWTGIDQTSSPLLTLSCWLTPLMILAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKY-PWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 81 QNHLQHEppARKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRWGSQPERLSAGIYFLFYTLISSLPL 160
Cdd:MTH00014 80 FKIFQNN--KAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 161 LIAILYLNSQTGTLYFPTLKLHPYStqLTPTKYWSALLLNLallmaFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLL 240
Cdd:MTH00014 158 LMSILLIFYTNNSLSMLMSSMEPPS--IYLMNLWWLITILA-----FMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 241 KLGGYGIMRITCLTnPPANNLLHYPFITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMIL 320
Cdd:MTH00014 231 KLGGYGLLRMSSLF-MHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAM 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 321 MISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMAALFNWSTPTILL 400
Cdd:MTH00014 310 MIAHGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAIL 389
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 401 TGVATLLTAAYTLFMLTSTQRGTLPPHITTLQNSTTREHLLMTLHLLPMLLLILKPELIS 460
Cdd:MTH00014 390 LAITSFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLIT 449
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
37-438 |
1.50e-101 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 309.85 E-value: 1.50e-101
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 37 LSLQWLTPSYYPYKNLTQWTGIDQTSSPLLTLSCWLTPLMILASQNHLQHEPPARKRIFMTTLIVVqpLIIMAFSTTELT 116
Cdd:MTH00150 1 LSLLLLYSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCL--ILVLAFSVSSLL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 117 TFYISFEATLIPTLILITRWGSQPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFptlklhpYSTQLTPTKYWSA 196
Cdd:MTH00150 79 MFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFM-------LLISSLRKLLSSM 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 197 LLLNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTNppannLLHYPF----ITLALW 272
Cdd:MTH00150 152 GLWGLLVFLAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFS-----LSSSSFsiflISLSLW 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 273 GALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQG 352
Cdd:MTH00150 227 GGVLTSLICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKG 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 353 LQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMAALFNWSTPTILLTGVATLLTAAYTLFMLTSTQRGTLPPHITTLQ 432
Cdd:MTH00150 307 MLMLYPSLSLWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFN 386
|
....*.
gi 2554488875 433 NSTTRE 438
Cdd:MTH00150 387 ELKSSE 392
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
8-422 |
1.29e-99 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 305.75 E-value: 1.29e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 8 TIMLLPTTLLSPPKLMWTNTTMYSLLIATLSLQWLTPSYYPYKNLTQWTGIDQTSSPLLTLSCWLTPLMILASQNHLqhE 87
Cdd:MTH00205 5 GVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVF--K 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 88 PPARKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRWGSQPERLSAGIYFLFYTLISSLPLLIAILYL 167
Cdd:MTH00205 83 SNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 168 NSQTGTLYFPTLKLHPYSTQLtptkywsALLLNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGI 247
Cdd:MTH00205 163 NSLNFSLSMFFNFPLNFSDFY-------LFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGL 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 248 MRITC---LTNPPANNLlhypFITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISH 324
Cdd:MTH00205 236 IRITSmlyKLNSNFSEL----FFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAH 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 325 GLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMAALFNWSTPTILLTGVA 404
Cdd:MTH00205 312 GLCSSGMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLI 391
|
410
....*....|....*...
gi 2554488875 405 TLLTAAYTLFMLTSTQRG 422
Cdd:MTH00205 392 SFLSGAYSLYLYSQSQHG 409
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
113-405 |
2.30e-73 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 232.97 E-value: 2.30e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 113 TELTTFYISFEATLIPTLILITRWGSQPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFPTLKLhpysTQLTPTK 192
Cdd:pfam00361 2 NDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSK----ALTGGLN 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 193 YWSALLLNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTnPPANNLLHYPFITLALW 272
Cdd:pfam00361 78 SSGLLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLY-LPSSPFIQQILLILAII 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 273 GALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLA-NTNYERTHSRILLLTQ 351
Cdd:pfam00361 157 SMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYG 236
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 2554488875 352 GLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMAALFNWSTPTILLTGVAT 405
Cdd:pfam00361 237 GLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
57-438 |
6.84e-73 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 237.67 E-value: 6.84e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 57 GIDQTSSPLLTLSCWLTPLMILASQNHLQHeppaRKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRW 136
Cdd:COG1008 79 GVDGISLPLVLLTALLTPLAILASWNEIKK----RPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIW 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 137 GSqPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYF--PTLKLHPYSTQLTPTKYWsalllnlALLMAFMVKAPLY 214
Cdd:COG1008 155 GG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFdiAELAAAPLPLTAQLLLFL-------AFFIAFAVKVPMF 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 215 GLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTNPPANNLLHYPFITLALWGALMTSSMCLRQIDLKSLIAYS 294
Cdd:COG1008 227 PFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYS 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 295 SVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMAL 374
Cdd:COG1008 307 SVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGL 386
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2554488875 375 PPTTNLMAELSIMAALFNWSTPTILLTGVATLLTAAYTLFMLtstQR---GTLPPHITTLQNSTTRE 438
Cdd:COG1008 387 PGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY---QRvffGPLKEELAELPDLNPRE 450
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
57-416 |
1.59e-64 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 215.57 E-value: 1.59e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 57 GIDQTSSPLLTLSCWLTPLMILASQNHLQHeppaRKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRW 136
Cdd:TIGR01972 74 GVDGISLLLVLLTALLTLLAILASWESIQK----RVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 137 GSqPERLSAGIYFLFYTLISSLPLLIAILYLNSQTG-TLYFPTLKLHPYSTQltpTKYWsallLNLALLMAFMVKAPLYG 215
Cdd:TIGR01972 150 GG-PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGgTFDLLELLNLPLPFG---VQTW----LFLAFFIAFAVKVPLFP 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 216 LHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTNPPANNLLHYPFITLALWGALMTSSMCLRQIDLKSLIAYSS 295
Cdd:TIGR01972 222 LHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSS 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 296 VSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALP 375
Cdd:TIGR01972 302 ISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLP 381
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 2554488875 376 PTTNLMAELSIMAALFNWSTPTILLTGVATLLTAAYTLFML 416
Cdd:TIGR01972 382 GTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
57-415 |
2.79e-64 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 215.45 E-value: 2.79e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 57 GIDQTSSPLLTLSCWLTPLMILASQNHLQHeppaRKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRW 136
Cdd:PRK05846 79 GVDGISLLLVVLTALLTPLAVLASWEEIKK----RVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVW 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 137 GSqPERLSAGIYFLFYTLISSLPLLIAILYL----NSQTGTLYFPTLKLHPYSTQLtptKYWsallLNLALLMAFMVKAP 212
Cdd:PRK05846 155 GG-KNRIYAATKFFLYTLLGSLLMLVAIIYLvvvyYNATGTFDIADLLNLPLPPGV---QYW----LFLAFFIAFAVKMP 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 213 LYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTNPPANNLLHYPFITLALWGALMTSSMCLRQIDLKSLIA 292
Cdd:PRK05846 227 MFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIA 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 293 YSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNM 372
Cdd:PRK05846 307 YSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASL 386
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 2554488875 373 ALPPTTNLMAELSIMAALFNWSTPTILLTGVATLLTAAYTLFM 415
Cdd:PRK05846 387 GLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWL 429
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
57-415 |
2.31e-59 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 202.22 E-value: 2.31e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 57 GIDQTSSPLLTLSCWLTPLMILASQNHLQHeppaRKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRW 136
Cdd:MTH00204 80 AVDGVSLFFILLTTLLIPICILISWKSIKF----LFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIW 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 137 GSQPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFPTL---KLhPYSTQLtptkyWsallLNLALLMAFMVKAPL 213
Cdd:MTH00204 156 GSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILlniKL-PLSIQK-----W----LLVGFFLSLAVKIPQ 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 214 YGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTNPPANNLLHYPFITLALWGALMTSSMCLRQIDLKSLIAY 293
Cdd:MTH00204 226 IPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAY 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 294 SSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMA 373
Cdd:MTH00204 306 SSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMG 385
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 2554488875 374 LPPTTNLMAELSIMAALFNWSTPTILLTGVATLLTAAYTLFM 415
Cdd:MTH00204 386 FPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYL 427
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
57-415 |
8.35e-55 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 189.88 E-value: 8.35e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 57 GIDQTSSPLLTLSCWLTPLMILASQNHLQHeppaRKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRW 136
Cdd:MTH00217 77 AVDGISIFFLILTALLTPICILISWNSIKF----LIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIW 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 137 GSQPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFPTLklhpYSTQLtpTKYWSaLLLNLALLMAFMVKAPLYGL 216
Cdd:MTH00217 153 GSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQAL----CCLKI--EKELQ-YFIFLGFFLSLAIKIPKIPF 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 217 HLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTNPPANNLLHyPFI-TLALWGALMTSSMCLRQIDLKSLIAYSS 295
Cdd:MTH00217 226 HIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFS-PLIqTLSLLAIIYGSLTTCRQVDLKRIIAYSS 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 296 VSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALP 375
Cdd:MTH00217 305 VAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIP 384
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 2554488875 376 PTTNLMAE-LSIMAAlFNWSTPTILLTGVATLLTAAYTLFM 415
Cdd:MTH00217 385 LSCNFVGEfLSLLAA-FEYSYIVGVLASLGMVLSAGYSIYL 424
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
58-438 |
3.29e-51 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 180.89 E-value: 3.29e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 58 IDQTSSPLLTLSCWLTPLMILASQNHLQHeppaRKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRWG 137
Cdd:MTH00226 100 VDGISIYFIILTGFIVPCSILISWHSVKY----LTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWG 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 138 SQPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFPTLKLHPYSTQLTPTKYwsallLNLALLMAFMVKAPLYGLH 217
Cdd:MTH00226 176 SREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSHVVSEQTQKW-----IFLGIFLAMAVKIPIFPFH 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 218 LWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTNPPANNLLHYPFITLALWGALMTSSMCLRQIDLKSLIAYSSVS 297
Cdd:MTH00226 251 IWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVA 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 298 HMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPT 377
Cdd:MTH00226 331 HMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPS 410
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2554488875 378 TNLMAELSIMAALFNWSTPTILLTGVATLLTAAYTLFMLTSTQRGTLPPHITTLQNSTTRE 438
Cdd:MTH00226 411 GNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFARDVNRRE 471
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
94-418 |
7.34e-44 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 158.53 E-value: 7.34e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 94 IFMTTLIVVqpLIIMAFSTTELTTFYISFEATLIPTLILITRWGSQPERLSAGIYFLFYTLISSLPLLIaILYLNSQTGT 173
Cdd:MTH00094 65 LILSNLLIL--ICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLF-VYLKNFFFFS 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 174 LYFPTLKLHpystqltptkywsaLLLNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCL 253
Cdd:MTH00094 142 LCYFDFFLS--------------WEMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGS 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 254 TNPPANNLlhypFITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFC 333
Cdd:MTH00094 208 LNFVYNNF----WIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFY 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 334 LANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMAALFNWSTPTILLTGVATLLTAAYTL 413
Cdd:MTH00094 284 LIGEFYHISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSL 363
|
....*
gi 2554488875 414 FMLTS 418
Cdd:MTH00094 364 FLIVS 368
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
54-416 |
2.82e-39 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 148.26 E-value: 2.82e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 54 QWT-GIDQTSSPLLTLSCWLTPLMILASQNhLQHEPparkRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLIL 132
Cdd:PRK12561 52 EWSlGVDGLSMPLVLLSGLITTLSIFASWK-VTRKP----RLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLL 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 133 ITRWGSQpERLSAGIYFLFYTLISSLPLLIAILYL--NSQTGTLYFPTLKLHPYSTQLTPTKYwsalllnLALLMAFMVK 210
Cdd:PRK12561 127 ISIWGGQ-KRLYAATKFILYTALASIFILVAGLALalSGDTFTFDLAELGAKSYPLALELLLY-------AGFLIAFGVK 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 211 APLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTNPPANNLLHYPFITLA----LWGALMTssmcLRQID 286
Cdd:PRK12561 199 LPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPALAILGvvniIYGALNA----FAQDN 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 287 LKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLL 366
Cdd:PRK12561 275 VKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTA 354
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 2554488875 367 ANLTNMALPPTTNLMAELSIMAALFN-------WSTPTILLTGVATLLTAAYTLFML 416
Cdd:PRK12561 355 SSMASLALPGMSGFVSELTVFLGITSsdvysstFRTITILLAAVGLILTPIYLLSML 411
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
58-414 |
9.16e-39 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 145.29 E-value: 9.16e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 58 IDQTSSPLLTLSCWLTPLMILASQNHLQHEppARKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITrWG 137
Cdd:COG0651 74 ADRLSALFLLLTALVALAVLLYSIGYMRHE--RRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVA-LG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 138 SQPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFPTLKLHpySTQLTPTkywSALLLNLALLMAFMVKAPLYGLH 217
Cdd:COG0651 151 GTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAR--LAELDPG---LLLAAFALLLVGFGIKAALFPLH 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 218 LWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRI-TCLTNPPANNLLHYPFITLALWGALMTSSMCLRQIDLKSLIAYSSV 296
Cdd:COG0651 226 FWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVlTLLFGADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSV 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 297 SHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPP 376
Cdd:COG0651 306 SQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPP 385
|
330 340 350
....*....|....*....|....*....|....*...
gi 2554488875 377 TTNLMAELSIMAALFNWSTPTILLTGVATLLTAAYTLF 414
Cdd:COG0651 386 LSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFV 423
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
57-431 |
1.40e-37 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 143.69 E-value: 1.40e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 57 GIDQTSSPLLTLSCWLTPLMILASQNHLQheppaRKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRW 136
Cdd:PRK06473 76 GVDGLSLPLLVLNSLLTLIAIYSSDESIQ-----RPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 137 GSQpERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTlyfPTLKLHPYSTQLTPTKywSALLLNLALLMAFMVKAPLYGL 216
Cdd:PRK06473 151 GGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGA---SSFDYEPLRSHTLPLS--TQLLLLAPILVGFGIKIPLVPF 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 217 HLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTNPPANNLLHYPFITLALWGALMTSSMCLRQIDLKSLIAYSSV 296
Cdd:PRK06473 225 HTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSI 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 297 SHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQGL---QPLLPLMATWWLLANLTNMA 373
Cdd:PRK06473 305 GHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAG 384
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 2554488875 374 LPPTTNLMAELSIMAALFNWSTPTILLTGVATLLTAAYTLFMLTSTQRGTLPPHITTL 431
Cdd:PRK06473 385 IPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNL 442
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
45-416 |
5.29e-33 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 130.98 E-value: 5.29e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 45 SYYPYKNLTQWTGIDQTSSPLLTLSCWLTPLMILASQnhlqhePPARK-RIFMTTLIVVQPLIIMAFSTTELTTFYISFE 123
Cdd:PRK02546 72 SWLPQLGLTWSVGADGLSMPLILLTGFITTLAVLAAW------PVTFKpKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWE 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 124 ATLIPTLILITRWGSQpERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYF--PTLKLHPYSTQLTPTKYwsalllnL 201
Cdd:PRK02546 146 LELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFdmTALAAKDFGLGFQLLCY-------A 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 202 ALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTNPPANNLLHYPFITLALWGALMTSSMC 281
Cdd:PRK02546 218 GLLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLIVLGVVNIIYAALTS 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 282 LRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMA 361
Cdd:PRK02546 298 FAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMF 377
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2554488875 362 TWWLLANLTNMALPPTTNLMAELSIMAAL-------FNWSTPTILLTGVATLLTAAYTLFML 416
Cdd:PRK02546 378 AMWTACSLASLALPGMSGFVAELMVFVGFatsdaytLPFRVVVVFLAAVGVILTPIYLLSML 439
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
57-416 |
1.31e-29 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 120.82 E-value: 1.31e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 57 GIDQTSSPLLTLSCWLTPLMILASQnhlqhePPARK-RIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITR 135
Cdd:CHL00011 81 GIDGLSIGPILLTGFITTLATLAAW------PVTRNsRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSM 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 136 WGSQpERLSAGIYFLFYTLISSLPLLIAILYL---NSQTGTLYFPTLKLHPYSTQLTPTKYWSALLLnlallmaFMVKAP 212
Cdd:CHL00011 155 WGGK-KRLYSATKFILYTAGGSIFLLIGVLGMglyGSNEPTLNFETLANQSYPVALEILFYIGFLIA-------YAVKLP 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 213 LYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTNPPAnnllHYPFIT-LALWGALM---TSSMCLRQIDLK 288
Cdd:CHL00011 227 IIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHA----HSIFSPwLVIVGAIQiiyAASTSLGQRNLK 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 289 SLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLAN 368
Cdd:CHL00011 303 KRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFS 382
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 2554488875 369 LTNMALPPTTNLMAEL----SIMAALFNWSTPTILLT---GVATLLTAAYTLFML 416
Cdd:CHL00011 383 MASLALPGMSGFVAELivffGIITSQKYLLMPKILITfvmAIGMILTPIYLLSML 437
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
57-424 |
1.80e-28 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 117.51 E-value: 1.80e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 57 GIDQTSSPLLTLSCWLTPLMILASQNHLQheppaRKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRW 136
Cdd:PRK07363 76 GVDGLSLPLLVLNSLLTWIAIYSIGENTE-----RPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 137 GSQpERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFptlKLHPYSTQLTPTKywSALLLNLALLMAFMVKAPLYGL 216
Cdd:PRK07363 151 GGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSF---DYDAISTQNLSLN--TQLILLTGLLLGFGIKIPLVPL 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 217 HLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTNPPANNLLHypfITLALWG---ALMTSSMCLRQIDLKSLIAY 293
Cdd:PRK07363 225 HTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVA---PGLAIIGtisVIYGALSAIAQKDIKRMVAY 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 294 SSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQGL-QPL--LPLMATWWLLANLT 370
Cdd:PRK07363 302 SSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLmNPIrgLPLTSALLVLAGMA 381
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 2554488875 371 NMALPPTTNLMAELSIMAALFNWSTPTILLTGVATLLTAAYTLFMLTSTQRGTL 424
Cdd:PRK07363 382 SAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRL 435
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-109 |
8.39e-27 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 103.76 E-value: 8.39e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 1 MLKIILPTIMLLPTTLLSPPKLMWTNTTMYSLLIATLSLQWLT-PSYYPYKNLTQWTGIDQTSSPLLTLSCWLTPLMILA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNnPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 2554488875 80 SQNHLQHEPPARKRIFMTTLIVVQPLIIMA 109
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-414 |
9.41e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 103.90 E-value: 9.41e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 58 IDQTSSPLLTLSCWLTPLMILASQNHLQHEppARKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRWG 137
Cdd:PRK12667 80 VDLLGALLGLLTALVMFLILIYSYWYLEHE--SGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 138 SQPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFP--TLKLHPYS----TQLTPTKYWSALLLNLALLMAFMVKA 211
Cdd:PRK12667 158 DRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMAdlSAKIRGLSfpltGGLAGNPPLALGVALALALWAFTIKA 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 212 PLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRI------TCLTNPPANNLLHYPFITLALWGALMTSSMCLRQI 285
Cdd:PRK12667 238 AIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlytifgISPSLIDFRAALSPILIILGAVSAIIGALMMVVQK 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 286 DLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWL 365
Cdd:PRK12667 318 DVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFL 397
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 2554488875 366 LANLTNMALPPTTNLMAELSIMAALFNWStptILLTGVATLLTAAYTLF 414
Cdd:PRK12667 398 IGALSLVGIPPLNGFFSKLLLFNALLESG---FYLPALVLLIASAISLV 443
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-411 |
1.36e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 99.95 E-value: 1.36e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 109 AFSTTELTTFYISFEATLIPTLILITRWGSqPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFPTL--KLHPYST 186
Cdd:PRK08375 122 ALLTADLFNLFVFLEIMSLSSYALVAMGGD-RRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLagALAENPT 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 187 QLTPTkywsalllnLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCL---TNPPANNLLH 263
Cdd:PRK08375 201 VVTAF---------GFVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTvfgGDFRFALGLG 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 264 YPFITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTH 343
Cdd:PRK08375 272 WLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYG 351
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2554488875 344 SRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSI-MAALFNWSTPTILLTGVATLLTAAY 411
Cdd:PRK08375 352 TRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLvVGAVEAGQWLVLAVLLASSLLALLY 420
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
89-414 |
2.02e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 74.99 E-value: 2.02e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 89 PARKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITrWGSQPERLSAGIYFLFYTLISSLPLLIAILYLN 168
Cdd:PRK07234 90 SAKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVY 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 169 SQTGTLYFPTLKLHPystqltptkywsaLLLNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIM 248
Cdd:PRK07234 169 QANGTFAFSGLATAD-------------PEAFALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLV 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 249 RITCLTNPPANnllhyPFITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIqthwsfsgAMILMISHGLTS 328
Cdd:PRK07234 236 RCALDVPGLDL-----IVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVK 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 329 SMLFCLANTNYERTHSRILLLTQGLQPLLPLmatwwLLANLTNMALPPTTNLMAELSIMAALFNWSTPTILLTGVATLLT 408
Cdd:PRK07234 303 STLFLCAGALPSRNFTELISQMLGIGKWIPL-----TMASFSIAGFPLLAGFVSKVLTLKNLLPWQAIALNLAAVGTAAS 377
|
....*.
gi 2554488875 409 AAYTLF 414
Cdd:PRK07234 378 FWKFIF 383
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
210-400 |
8.87e-13 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 69.96 E-value: 8.87e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 210 KAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTN-PPANNLLHYPFITLALWGALMTSSMCLRQIDLK 288
Cdd:PRK06458 227 KVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDaAIGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIK 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 289 SLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLAN 368
Cdd:PRK06458 307 RLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGA 386
|
170 180 190
....*....|....*....|....*....|....*.
gi 2554488875 369 LTNMALPPTTNLMAELSIMAALFN----WSTPTILL 400
Cdd:PRK06458 387 LAIAGMPPFGVFISEFLILTAGLArgplLIAILLLL 422
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
57-418 |
1.90e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 69.37 E-value: 1.90e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 57 GIDQTSSPLLTLSCWLTPLMILASQNHLQHEPPARKR----IFMTTLIVVQPLIIMAFSTTELTTFYisfEATLIPTLIL 132
Cdd:PRK08667 74 HIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERAnllsALTALFILSMLGVVASANTFSFLFFW---EIMALSSFFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 133 ITRWGSQPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFPTLKlhpYSTQLTPTKYwsalllnLALLMAFMVKAP 212
Cdd:PRK08667 151 VMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLG---ASAGILSLVF-------LLLFLGFGIKAG 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 213 LYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTNPPAnnlLHYPFITLAL--WGALMTSSMCLRQIDLKSL 290
Cdd:PRK08667 221 IIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPE---LWWGVLILLAgsISALLGVIYALKEHDLKGL 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 291 IAYSSVSHMGL--------VIAACM-IQT--HWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPL 359
Cdd:PRK08667 298 LAYSSIENIGIilmgiglyVIFGVYgLDTlaLLALGGALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPY 377
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 2554488875 360 MATWWLLANLTNMALPPTTNLMAELSIMAALFNwsTPTILLTGVATLLTAAYTLFMLTS 418
Cdd:PRK08667 378 TSALFLVGAVSIAALPPFNGFASELLLYESFFQ--SFSVADPLIKILLFSVLAIFALTS 434
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
94-414 |
2.67e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 68.46 E-value: 2.67e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 94 IFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRWGSqPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGT 173
Cdd:PRK12665 112 IFLPTYLILVAGVSNAFLAGDLFNLYVGFEILLVASYVLLTLGAT-AARVRAGVTYVMVSMVSSLLFLIGIALVYAATGT 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 174 LYFPTLKLH----PYSTQLTptkywsallLNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMR 249
Cdd:PRK12665 191 LNMADLAVRldelPSGTRTA---------LFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIR 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 250 ITCLTNPpannllHYPFITLALWGALMTSSM----CLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHG 325
Cdd:PRK12665 262 THTLLFP------GGGLDTLLMVVALLTMVVgilgAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHI 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 326 LTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIM-AALFNWSTPTILLTGVA 404
Cdd:PRK12665 336 TVQTTLFLVVGLIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLeAGAEDGTWLAWALVAGG 415
|
330
....*....|
gi 2554488875 405 TlLTAAYTLF 414
Cdd:PRK12665 416 V-VTSLLTLY 424
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
110-332 |
5.88e-12 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 67.71 E-value: 5.88e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 110 FSTTELTTFYISFEATLIPTLILITRwGSQPERLSAGIYFLFyTLISSLPLLIAILYLNSQTGTLYFPTLklhpYSTQLT 189
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGTFDFADI----SQGLIN 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 190 PTKYWSALLLNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYG-------IMRITCLTNPPA---N 259
Cdd:PRK08668 189 DTSTGFALIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGfllvlyvLPGTKLFSEFGTyrgV 268
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2554488875 260 NLLHYPFITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLF 332
Cdd:PRK08668 269 PLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-418 |
7.53e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 67.15 E-value: 7.53e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 58 IDQTSSPLLTLSCWLTPLMILASQNHLQH---EPPARKRIFMTTLIVVQPLIimAFSTTELTTFyISFEATLIPTLILIT 134
Cdd:PRK06589 81 LEPLGLIFLLLIGFLWICALLYTPKYLAInniDSSSRFLFFFNLTILIGVLI--ALSSDLFTMF-VCYELLTISTAFLIG 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 135 rWGSQPERLSAGIYFLFYTLISSLPL-LIAILYLNSQTGTLYFPTLKLHPYSTQLtptkywsallLNLALLMAFMVKAPL 213
Cdd:PRK06589 158 -HTRNNISLSGGYKYLKILMISALLLfLPAVILIYTKTGNLDFVSGGLFSKNQSI----------ILLLMFIYGIAKTAI 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 214 YGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITC----LTNPPANNLLHYPFITLALWGALMTSSMCLRQIDLKS 289
Cdd:PRK06589 227 FPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLyifgLSYLQRIFAEFNWLIFIPIVSIFYSSLKALKTDNIKK 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 290 LIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANL 369
Cdd:PRK06589 307 ILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSL 386
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 2554488875 370 TNMALPPTTNLMAELSIMAALFNWSTPTI-----LLTGVATLLTAAYTLFMLTS 418
Cdd:PRK06589 387 SLIGIPIFSGFISKFLILLAASEQNQPWLsiivmLVVIASSILSALYLLKILSS 440
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
118-349 |
7.88e-12 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 66.87 E-value: 7.88e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 118 FYISFEATLIPTLILITRWGSQPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFptlKLHPYSTQLTPTKYWsal 197
Cdd:MTH00062 96 FWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNF---SDWGSDDSVSLIVYY--- 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 198 llnlALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTNPpaNNLLHYPFITLALWGALMT 277
Cdd:MTH00062 170 ----VLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFS--GSFLGYLFLCCLFSVFFLI 243
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2554488875 278 SSMclRQIDLKSLIAYSSVSHMglVIAACMIQTHWSFSGAMILMIS--HGLTSSMLFCLANTNYERTHSRILLL 349
Cdd:MTH00062 244 TAC--SELDGKRWLAFLSLSHI--LVPVLGLFVGDWSSINLSFFYClgHGLSAGLVFLLLWCFYEVSGSRNWVL 313
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
111-412 |
1.46e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 63.19 E-value: 1.46e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 111 STTELTTFYISFEATLIPTLILITRWGSQPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLyfpTLKLHPYSTQLTP 190
Cdd:PRK08376 139 ITGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTL---NMAYLAVKMSENP 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 191 TKYwsALLLNLALLMAFMVKAPLYGLHLWLPKAHVEAPiaGSMLLAALLLKLGG-YGIMRITCLTNPPANNLLHYPF--I 267
Cdd:PRK08376 216 TVV--AKIALALFIAGLAMKSGAVPVHMWLPDAYPAAP--SSISAMLLVIKQAGlYALARVLFSIYGPAINLATVGWviI 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 268 TLALWGALMTSSMCLRQIDLKSLIAYSSVSHMG---------LVIAACMIQTHWSF---SGAMILMISHGLTSSMLFCLA 335
Cdd:PRK08376 292 ILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGymllglgvgLAALGDPAMASYGEialAGGIYHIVNHALYKALLFLTA 371
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2554488875 336 NTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIM--AALFNWSTPTILLTGVAtLLTAAYT 412
Cdd:PRK08376 372 GAVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYesSALFNPILGVIAMIGSV-LTLASFV 449
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
93-410 |
4.25e-10 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 61.69 E-value: 4.25e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 93 RIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRWGSQpERLSAGIYFLFYTLISSLPLLIAILYLNSQT- 171
Cdd:PRK08676 102 KVFYLGFNLLLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSAR-ENIDAALKYIFIASTAMIFAFIGLIFLFSLTr 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 172 -----GTLYFPTLKLHpySTQLTPTkywSALLLNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYG 246
Cdd:PRK08676 181 qalgtGTLNWTELAAH--ASLLSPS---VLGASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYG 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 247 IMRITCLTN-----PPANNLLhypfITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILM 321
Cdd:PRK08676 256 ILRLSALLRqsgaaEQFSNVL----IGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHM 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 322 ISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMAALFNWSTPTILLT 401
Cdd:PRK08676 332 LAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAV 411
|
....*....
gi 2554488875 402 GVATLLTAA 410
Cdd:PRK08676 412 LLLLLLAAS 420
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
106-406 |
5.45e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 61.50 E-value: 5.45e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 106 IIMAFSTTELTTFYISFEATLIPTLILITRWGSQPErLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFPTL--KLhp 183
Cdd:PRK07691 121 VNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQ-LRESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADIsvKI-- 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 184 ysTQLTPTKYWSALLLNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTNPPANNLLH 263
Cdd:PRK07691 198 --AELSAGQTGLITVVAILFLFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTH 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 264 YPFITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTH 343
Cdd:PRK07691 276 YLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITG 355
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2554488875 344 SRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMAALFN----WSTPTILLTGVATL 406
Cdd:PRK07691 356 TTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEagfyVSGIIVLLSSLLVL 422
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
117-413 |
7.51e-10 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 61.21 E-value: 7.51e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 117 TFYISFEATLIPTLILITRWGSQPErlSAGIYFLFYTLISSLPLLIAILYLNSQTGTlyfptlklhpysTQLT---PTKY 193
Cdd:PRK12650 134 VLFVAWELVSLASFFLIARSGSGGE--AGSIRTLILTFFGGLTLLAAVAIAATQTGT------------TSLSgilHSDV 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 194 WSALLLNLALLMAFMV-----KAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCL-TNPPANNLLhypFI 267
Cdd:PRK12650 200 WAEKPGLTTVVAVLIAvaaftKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVfHDVAVWNWL---LI 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 268 TLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRIL 347
Cdd:PRK12650 277 IVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDI 356
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2554488875 348 LLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMAALfnWSTP-----TILLT---GVATLLTAAYTL 413
Cdd:PRK12650 357 RRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTAF--LEAPggnagVVLLLvgaALGAVFTFAYSA 428
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
109-407 |
1.24e-09 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 60.35 E-value: 1.24e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 109 AFSTTELTTFYISFEATLIPTLILITrWGSQPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFPTLKLHPYSTQL 188
Cdd:PRK12663 124 SFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGD 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 189 TPTkywsALLLNLALLMAFMVKAPLYGLHlWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTNPPANNLLHYPFIT 268
Cdd:PRK12663 203 TAT----LTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLAT 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 269 LALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILL 348
Cdd:PRK12663 278 MAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQ 357
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2554488875 349 LTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIM-AALFN---WSTPTILLTGVATLL 407
Cdd:PRK12663 358 YLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVqGALDNgayILLALMLITSLITMY 420
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
267-428 |
1.46e-09 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 60.17 E-value: 1.46e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 267 ITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQthwSFSGAMILMISHGLTSSMLFCLANTNYERTHSRI 346
Cdd:COG1009 279 AIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRD 355
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 347 LLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMAALFNWSTPTILLTGVATL---LTAAYT--LFMLT--ST 419
Cdd:COG1009 356 IRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTAFYSfrLFFLVffGK 435
|
....*....
gi 2554488875 420 QRGTLPPHI 428
Cdd:COG1009 436 PRPKTPKHP 444
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
209-389 |
4.82e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 58.21 E-value: 4.82e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 209 VKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRIT--------CLTNPPANNLlhypFITLALWGALMTSSM 280
Cdd:PRK12662 221 IKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVydvfkanfVFTTLPFNNV----FMILAALAIVFGSVL 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 281 CLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANT---NYERTHSRILLltqGLQPLL 357
Cdd:PRK12662 297 AILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSisyHFGTTKLEDCL---NLWKSM 373
|
170 180 190
....*....|....*....|....*....|..
gi 2554488875 358 PLMATWWLLANLTNMALPPTTNLMAELSIMAA 389
Cdd:PRK12662 374 PKITLAFVLLSLSLIGMPPTSGFVAKWYILDA 405
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
155-411 |
1.31e-08 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 57.08 E-value: 1.31e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 155 ISSLPLLIAILYLNSQTGTLYFptLKLHPYSTQLTPTkywSALLLNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSML 234
Cdd:PRK08377 169 IGSSFFLIGVALIYGATGTLNM--AHIAQLAGTIDPT---VAQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVM 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 235 LAALLLKLGGYGIMRITCLTNPPA--NNLLHYpFITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHW 312
Cdd:PRK08377 244 FSAFVVKAGLYAMARILYLMQNANgwSSVLKL-VIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQA 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 313 SFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMAALFN 392
Cdd:PRK08377 323 GVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLS 402
|
250 260
....*....|....*....|.
gi 2554488875 393 --WSTPTILLTGvATLLTAAY 411
Cdd:PRK08377 403 agYTWPVALVLG-ASVVEAVY 422
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
266-406 |
3.48e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 56.08 E-value: 3.48e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 266 FITLALWGA---LMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERT 342
Cdd:PRK12647 259 QTILPLFGGltmLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHET 338
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2554488875 343 HSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMAALFNWSTPTILLTGVATL 406
Cdd:PRK12647 339 GTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
119-419 |
5.03e-08 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 55.53 E-value: 5.03e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 119 YISFEATLIPTLILITRWGSQPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTlyfptlklHPYSTQLTPTKYWSALL 198
Cdd:PRK12646 136 YVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGT--------NNITEILGQADHIKNHG 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 199 LNLALLMAFMV----KAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRITCLTNppANNLLHYPFITLALWG 273
Cdd:PRK12646 208 LFIPMIFMFLLgaftKSAQFPFHIWLPRA-MAAPTPVSAYLHSATMVKAGiFLLFRFTPLLG--LSNMYIYIVTFVGLIT 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 274 ALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMI------QTHWSFS--------GAMILMISHGLTSSMLFCLANTNY 339
Cdd:PRK12646 285 MLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIgggyaqHQQDAIAsiyvfvlfAALFHLMNHAIFKCALFMGVGIID 364
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 340 ERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMAALFNW---------STPTILLTGV-ATLLTA 409
Cdd:PRK12646 365 HEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTgqlsqfsliSMIIIVFIGViASIFTF 444
|
330
....*....|
gi 2554488875 410 AYTLFMLTST 419
Cdd:PRK12646 445 TYALYMVKEV 454
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
140-391 |
3.15e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 52.97 E-value: 3.15e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 140 PERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFPTLKLHPystqLTPtkyWSALLLNLALLMAFMVKAPLYGLHLW 219
Cdd:PRK06521 160 AEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMRAAH----LSP---FWASLVFLLALFGFGAKAGLVPLHVW 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 220 LPKAHVEAPIAGSMLLAALLLKLGGYGIMRItcltnppANNLLHYPfitLALWGALM------TSSM----CLRQIDLKS 289
Cdd:PRK06521 233 LPRAHPAAPSHVSALMSGVMLKVAIYGILRV-------VFDLLGAP---GWWWGVLVlalgaiSAVLgvlyALAEHDLKR 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 290 LIAYSSVSHMGLVIAA---CMI--------QTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLP 358
Cdd:PRK06521 303 LLAYSTIENIGIIFVGlglAMVfiaygmplLAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMP 382
|
250 260 270
....*....|....*....|....*....|...
gi 2554488875 359 LMATWWLLANLTNMALPPTTNLMAELSIMAALF 391
Cdd:PRK06521 383 WTAWAFLIGCLAISALPPLNGFVSEWLLLQSLL 415
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
75-328 |
5.89e-06 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 48.57 E-value: 5.89e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 75 LMILASQNHLQHEPPARKRIFMTTLIVVQPLIIMAfSTTELTTFYISFEATLIPTLILITRWGSQPERLSAGI-YFLFYT 153
Cdd:COG1007 85 LVLLLSRDYLERRGLLRGEFYALLLFATLGMMLMA-SANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGA 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 154 LISSLPLL-IAILYLnsQTGTLYFPTLKLHPYSTQLTPTkywsalllNLALLMAFMV-----KAPLYGLHLWLPKAHVEA 227
Cdd:COG1007 164 LSSGFLLYgISLLYG--ATGSLNLAGIAAALAAGGANSP--------LLLLGLVLVLaglafKLSAVPFHMWTPDVYEGA 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 228 PIAGSMLLAALLLKLGGYGIMRITCLTNPPANNLLHYPFITLA----LWGALMTssmcLRQIDLKSLIAYSSVSHMGLVI 303
Cdd:COG1007 234 PTPVTAFLATAPKIAAFAALLRLLVEAFPGLAADWQLLLAVLAvlsmTVGNLAA----LAQTNVKRMLAYSSIAHAGYLL 309
|
250 260
....*....|....*....|....*
gi 2554488875 304 AACMIQTHWSFSGAMILMISHGLTS 328
Cdd:COG1007 310 LGLAAGTPLGVSAALFYLLAYLFMN 334
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
83-419 |
6.75e-06 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 48.43 E-value: 6.75e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 83 HLQHEPPARKRIFMTTLIVVQPLIImaFSTTeLTTFYISFEATLIPTLILITRWGSqPERLSAGIYFLFYTLISSLPLLI 162
Cdd:PRK06525 106 HPVHEGTGRYYAFLLLFIGAMAGLV--YSST-LLGLLLFFEITGLCSWALISYYQS-PKALRSALKALLITHIGSLGLYL 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 163 AILYLNSQTGTLYFPTLKlhpystQLTP-TKYWSALLLNLALLMafmvKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLK 241
Cdd:PRK06525 182 AAATLFLQTGTFALSALS------GLHGsLKYLVFLGILFAAWG----KSAQLPFYSWLPDA-MEAPTPASAYLHAASMV 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 242 LGGYGIMRITCLTNPPANNLLHYPFITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWS---FSGAM 318
Cdd:PRK06525 251 KVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAILGSrlaLEGSI 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 319 ILMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMAALFnwstpti 398
Cdd:PRK06525 331 AYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGF------- 403
|
330 340
....*....|....*....|.
gi 2554488875 399 LLTGVATLLTAAYTLFMLTST 419
Cdd:PRK06525 404 ELSVEYWILLPAMVLLLIESV 424
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
261-376 |
1.86e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 46.95 E-value: 1.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 261 LLHYPFITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYE 340
Cdd:PRK06277 264 SAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSY 343
|
90 100 110
....*....|....*....|....*....|....*.
gi 2554488875 341 RTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPP 376
Cdd:PRK06277 344 RTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPP 379
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
95-413 |
2.84e-05 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 46.61 E-value: 2.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 95 FMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRWGSQPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTL 174
Cdd:MTH00020 113 FMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSL 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 175 YFPTLklhpySTQLTPTKYWSALLLNLALLMAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRITcl 253
Cdd:MTH00020 193 DFSSV-----FNMVVSAPSSDITLICLFLFIGAVGKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGvFLLIRSS-- 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 254 tnpPANNLLHYPFITLALWGAL---MTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIqTHWSFSgaMILMISHGLTSSM 330
Cdd:MTH00020 265 ---PLFEQAPLALIIVTIVGSLtvfFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGL-SHYSIS--LFHLMNHAFFKAL 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 331 LFCLANtnyerthSRILLLTQ--------GLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMAALF--NWSTPTILL 400
Cdd:MTH00020 339 LFLSAG-------SVIHALSDeqdmrkmgGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFgqYYLIFAYWL 411
|
330
....*....|...
gi 2554488875 401 TGVATLLTAAYTL 413
Cdd:MTH00020 412 GCFSALLTAFYSI 424
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
210-415 |
3.25e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 46.46 E-value: 3.25e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 210 KAPLYGLHLWLPKAhVEAPI-------AGSMLLAalllklGGYGIMRITcltnPPANNLLHYPFITLALWGALMTSS--M 280
Cdd:PRK12644 216 KSAIVPFHFWLPGA-MAAPTpvsaylhAAAMVKA------GIYLVARLA----PGFADVPVWRPTVLVLGLATMLLGgwR 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 281 CLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLM 360
Cdd:PRK12644 285 ALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSGLGRRQPVL 364
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2554488875 361 ATWWLLANLTNMALPPTTNLMAELSIMAALFNWSTP----TILLTGVA--TLLTAAYTL-FM 415
Cdd:PRK12644 365 AVVAALAAASMAGLPPLLGFVAKEAALEAVLHDGALgpagPVVLAGIVlgSILTVAYSLrFL 426
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
99-392 |
3.44e-05 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 46.09 E-value: 3.44e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 99 LIVVQPLIIMAfSTTELTTFYISFEATLIPTLILITRWGSQPERLSAGI-YFLFYTLISSLPLL-IAILYLnsQTGTLYF 176
Cdd:TIGR01770 109 LFALLGIFLLV-SSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLkYFILGAFSSGLLLFgISLIYG--FTGSLNF 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 177 PTLKLhpYSTQLTPTkYWSALLLNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTNP 256
Cdd:TIGR01770 186 EDLLL--FLSNGMLN-ISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYILF 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 257 PANNLLHYPFITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTS----SMLF 332
Cdd:TIGR01770 263 GFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSlgafGVLS 342
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 333 CLANTNYERTHSriLLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMAALFN 392
Cdd:TIGR01770 343 LLRSYKDEWIEY--ISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLK 400
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
137-406 |
1.33e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 44.46 E-value: 1.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 137 GSQPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFPTL--KLhpysTQLTPTKYWSALLLNLALLMAFMVKAPLY 214
Cdd:PRK12666 152 GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLaqRI----AQLPAADRALLEAGAALLLVVFLIKAAMW 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 215 GLHLWLPKAHVEA--PIAGSMllaALLLKLGGYGIMRITCLTNPPANNLLHYPFITLALWGALMTSSM----CLRQIDLK 288
Cdd:PRK12666 228 PLNFWLPPAYAAAsaPVAALF---AIMTKVGIYAILRLSTLLFGPEAGASAGFGQDWLLPGGLATLAFgaigVLAAQRLR 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 289 SLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTnYERTHSRI---LLLTQGLQPLLPLMATWWL 365
Cdd:PRK12666 305 RLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLADL-VERQRGAAadrLAVTPELYDLDEEEEEEVG 383
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2554488875 366 LANLTNMA---------------LPPTTNLMAELSIMAALFN--------WSTPTILLTGVATL 406
Cdd:PRK12666 384 VAIPATMAllgllfficalalagLPPLSGFLGKFALLQALLNppgagaawWLWALVLLSGLAAL 447
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
59-378 |
2.95e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 43.41 E-value: 2.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 59 DQTSSPLLTLSCWLTPLMILASQNHLQHEPPARKriFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRWGS 138
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPR--FLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTT 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 139 QPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFPTLKLHPYSTQLTPTKYWSALLLNLALLMAFMV--------- 209
Cdd:MTH00032 157 RIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNGGSVGSGIMDRGYYGGGAYESPLAPFAIIgillligci 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 210 -KAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGGYGIMritcLTNPPANNLLHYPFITLALWGAL---MTSSMCLRQI 285
Cdd:MTH00032 237 gKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFLM----IRSFPLFEKAPLTLLIITIFGALtafFAATVGLVQN 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 286 DLKSLIAYSSVSHMGLVIaaCMIQTHWSFSGAMILMISHGLTSSMLFCLA-----NTNYERTHSRILlltQGLQPLLPLM 360
Cdd:MTH00032 312 DLKKVIAYSTCSQLGYMV--LIIGIEGSHNVGLFHLVNHAFFKALLFLSAgsvihSTTVDEQDMRKM---GGLIHSIPFT 386
|
330
....*....|....*...
gi 2554488875 361 ATWWLLANLTNMALPPTT 378
Cdd:MTH00032 387 YTMMLIGSFSIMGLPYLT 404
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
280-328 |
4.39e-04 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 42.50 E-value: 4.39e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 2554488875 280 MCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTS 328
Cdd:PRK05777 287 AALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMT 335
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
117-332 |
8.38e-04 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 41.80 E-value: 8.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 117 TFYISFEATLIPTLILItrWGS-QPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFPTLklhpysTQLTPTKYWs 195
Cdd:PRK12668 117 TLFVFWELMAFTSTFLV--WARgTKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAI------AGLGGTAAW- 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 196 alllnlALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITcltnpPANNLLHYPFITLALWGAL 275
Cdd:PRK12668 188 ------LILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAF-----PGTELLIYIGAAMAVYGVF 256
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 2554488875 276 MTssmcLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLF 332
Cdd:PRK12668 257 FA----LLENDLRRLLSYHIVSQVGYMVAGIGIGTALAINGAVAHAFNHILYKGLLF 309
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
207-394 |
8.39e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 38.33 E-value: 8.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 207 FMVKAPLYGLHLWLPkahveaPIAGSMLLAALLLKLGGYGIMRITCLTNPPANNLLHYPFITLALWGALMTSSMCLRQID 286
Cdd:MTH00144 94 LCLKLGLFPFHFWVP------SVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLCVISVLSALVGSIGGLNQTQ 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 287 LKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGltsSMLFCLANTNYerthSRILLLTQGLQPLLPLMATWWLL 366
Cdd:MTH00144 168 VRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSG---FLFFSLWSGDS----GSMKDLGSLKPSYKTGLSIISLL 240
|
170 180
....*....|....*....|....*...
gi 2554488875 367 ANLtnMALPPTTNLMAELSIMAALFNWS 394
Cdd:MTH00144 241 LSL--GGLPPFLGFCSKLLVLISSMESS 266
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
106-332 |
9.77e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 38.09 E-value: 9.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 106 IIMAFSTTELTTFYISFEATLIPTLILITRWGSQPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFPTLKLHPYS 185
Cdd:MTH00196 6 ILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINLVLNS 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2554488875 186 TQLTPTKYWSALLLNLALLMAFMVKAPLYglHLWLPKAHVEAPiagsMLLAALLLKLGGYGIMRITCLTNPPANNLLHYP 265
Cdd:MTH00196 86 GQSFSSVSVPIGYLLIIVALLFKLSVAPF--HMWAPDVYEGAP----TKTTALLAIVPKLGIFSILVSIGLNVNILLIGG 159
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2554488875 266 FITLALwGALMTssmcLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLF 332
Cdd:MTH00196 160 LFSLFV-GAIGA----LNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVF 221
|
|
| |
