|
Name |
Accession |
Description |
Interval |
E-value |
| ATP6 |
MTH00120 |
ATP synthase F0 subunit 6; Provisional |
1-226 |
8.29e-91 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177181 Cd Length: 227 Bit Score: 266.31 E-value: 8.29e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 1 MNLNMFEQFASPEILLLPTNIMSMLIPILLI-YTKPTLLGNRISTILNWFLKTALSNMINQLSLAGQKWSRFLMSLLLLI 79
Cdd:MTH00120 1 MNLNFFDQFSSPELLGIPLILLAMLIPALLIpSPKNRLLTNRLTTLQLWLIKLITKQLMLPLNKKGHKWALILTSLMLLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 80 LLSNLLGLLPYTFTTTSQLSMNMAFAIPMWLGTVITGLTMKTSSSLAHMLPEGSPTPLIPFMILIETISLLMRPIALGVR 159
Cdd:MTH00120 81 LLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALGVR 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 74310592 160 LTPNITAGHLLMTMISSAALSFINMYNTLSIMTMMLLMLLTLLEMAVACIQAYVFILLITLYLQENT 226
Cdd:MTH00120 161 LTANLTAGHLLIQLISTATLNLLPTMPTLSLLTLIILLLLTILELAVAMIQAYVFVLLLSLYLQENT 227
|
|
| ATP_synt_6_or_A |
TIGR01131 |
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ... |
6-225 |
8.81e-41 |
|
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]
Pssm-ID: 273458 Cd Length: 226 Bit Score: 138.88 E-value: 8.81e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 6 FEQFASPE--ILLLPTNIMSMLIPILLI----YTKPTLLGNRISTILNWFLKTALSNMINQLSLAGQKWSRFLMSLLLLI 79
Cdd:TIGR01131 2 FSQFDISPitLFSLTLLSLILLLSLLIFlissSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFI 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 80 LLSNLLGLLPYTFTTTSQLSMNMAFAIPMWLGTVITGLTMKTSSSLAHMLPEGSPTPLIPFMILIETISLLMRPIALGVR 159
Cdd:TIGR01131 82 LISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVR 161
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 74310592 160 LTPNITAGHLLMTMISSAALSfiNMYNTLSIMTMMLLMLLTLLEMAVACIQAYVFILLITLYLQEN 225
Cdd:TIGR01131 162 LFANISAGHLLLTLLSGLLFS--LMSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDA 225
|
|
| ATP-synt_Fo_a_6 |
cd00310 |
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ... |
85-223 |
5.32e-31 |
|
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.
Pssm-ID: 349411 [Multi-domain] Cd Length: 156 Bit Score: 111.34 E-value: 5.32e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 85 LGLLPYTFTTTSQLSMNMAFAIPMWLGTVITGLTMKTSSSLAHMLPEGSPTPLIPFMILIETISLLMRPIALGVRLTPNI 164
Cdd:cd00310 21 LGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISELIRPLSLSVRLFANM 100
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 74310592 165 TAGHLLMTMISSAALSFINMyntLSIMTMMLLMLLTLLEMAVACIQAYVFILLITLYLQ 223
Cdd:cd00310 101 FAGHLLLALLSGLVPSLLSS---VGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
|
|
| ATP-synt_A |
pfam00119 |
ATP synthase A chain; |
89-223 |
1.54e-26 |
|
ATP synthase A chain;
Pssm-ID: 459679 [Multi-domain] Cd Length: 216 Bit Score: 101.80 E-value: 1.54e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 89 PYTFTTTSQLSMNMAFAIPMWLGTVITGL-TMKTSSSLAHMLPEGSPTPLIPFMILIETISLLMRPIALGVRLTPNITAG 167
Cdd:pfam00119 81 PGGFTVTADINVTLALALIVFLLVHYYGIkKHGLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAG 160
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 74310592 168 HLLMTMISSAALSFINMYNTLSIMTMMLLMLLTLLEMAVACIQAYVFILLITLYLQ 223
Cdd:pfam00119 161 HLLLLLLAGLIFALLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
|
|
| AtpB |
COG0356 |
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ... |
89-224 |
1.93e-15 |
|
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase
Pssm-ID: 440125 [Multi-domain] Cd Length: 212 Bit Score: 72.03 E-value: 1.93e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 89 PYTFTTTSQLSMNMAFAIPMWLGTVITGLTMK-TSSSLAHMLPEGSPtPLIPFMILIETISLLMRPIALGVRLTPNITAG 167
Cdd:COG0356 78 PGLFPPTADINVTLALALIVFVLVHYYGIKKKgLGGYLKHLFFPPFP-WLAPLMLPIEIISELARPLSLSLRLFGNMFAG 156
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 74310592 168 HLLMTMISSAALSFinmynTLSIMTMMLLMLLTLLEMAVACIQAYVFILLITLYLQE 224
Cdd:COG0356 157 HIILLLLAGLAPFL-----LLGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYISL 208
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| ATP6 |
MTH00120 |
ATP synthase F0 subunit 6; Provisional |
1-226 |
8.29e-91 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177181 Cd Length: 227 Bit Score: 266.31 E-value: 8.29e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 1 MNLNMFEQFASPEILLLPTNIMSMLIPILLI-YTKPTLLGNRISTILNWFLKTALSNMINQLSLAGQKWSRFLMSLLLLI 79
Cdd:MTH00120 1 MNLNFFDQFSSPELLGIPLILLAMLIPALLIpSPKNRLLTNRLTTLQLWLIKLITKQLMLPLNKKGHKWALILTSLMLLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 80 LLSNLLGLLPYTFTTTSQLSMNMAFAIPMWLGTVITGLTMKTSSSLAHMLPEGSPTPLIPFMILIETISLLMRPIALGVR 159
Cdd:MTH00120 81 LLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALGVR 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 74310592 160 LTPNITAGHLLMTMISSAALSFINMYNTLSIMTMMLLMLLTLLEMAVACIQAYVFILLITLYLQENT 226
Cdd:MTH00120 161 LTANLTAGHLLIQLISTATLNLLPTMPTLSLLTLIILLLLTILELAVAMIQAYVFVLLLSLYLQENT 227
|
|
| ATP6 |
MTH00073 |
ATP synthase F0 subunit 6; Provisional |
1-226 |
4.08e-64 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177144 Cd Length: 227 Bit Score: 198.65 E-value: 4.08e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 1 MNLNMFEQFASPEILLLPTNIMSMLIPILLIYTKPTL-LGNRISTILNWFLKTALSNMINQLSLAGQKWSRFLMSLLLLI 79
Cdd:MTH00073 1 MNLSFFDQFLSPTLLGIPLIMLAMLLPWLLFPTPTNKwLNNRLSTLQIWFLQNFTKQLMLPLNTPGHKWALILTSLMVFL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 80 LLSNLLGLLPYTFTTTSQLSMNMAFAIPMWLGTVITGLTMKTSSSLAHMLPEGSPTPLIPFMILIETISLLMRPIALGVR 159
Cdd:MTH00073 81 ITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPLALGVR 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 74310592 160 LTPNITAGHLLMTMISSAALSFINMYNTLSIMTMMLLMLLTLLEMAVACIQAYVFILLITLYLQENT 226
Cdd:MTH00073 161 LTANLTAGHLLIQLISTATLVLLPLMPTVSILTMIVLFLLTLLEIAVAMIQAYVFVLLLSLYLQENV 227
|
|
| ATP6 |
MTH00132 |
ATP synthase F0 subunit 6; Provisional |
1-225 |
5.12e-64 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177190 Cd Length: 227 Bit Score: 198.17 E-value: 5.12e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 1 MNLNMFEQFASPEILLLPTNIMSMLIPILLIYTKPT-LLGNRISTILNWFLKTALSNMINQLSLAGQKWSRFLMSLLLLI 79
Cdd:MTH00132 1 MTLSFFDQFMSPTYLGIPLIALALTLPWILFPTPTSrWLNNRLLTLQGWFINRFTQQLLLPLNVGGHKWALLLTSLMLFL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 80 LLSNLLGLLPYTFTTTSQLSMNMAFAIPMWLGTVITGLTMKTSSSLAHMLPEGSPTPLIPFMILIETISLLMRPIALGVR 159
Cdd:MTH00132 81 ITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLFIRPLALGVR 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 74310592 160 LTPNITAGHLLMTMISSAALSFINMYNTLSIMTMMLLMLLTLLEMAVACIQAYVFILLITLYLQEN 225
Cdd:MTH00132 161 LTANLTAGHLLIQLIATAAFVLLPLMPTVAILTATLLFLLTLLEVAVAMIQAYVFVLLLSLYLQEN 226
|
|
| ATP6 |
MTH00179 |
ATP synthase F0 subunit 6; Provisional |
1-226 |
6.00e-60 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177230 Cd Length: 227 Bit Score: 187.85 E-value: 6.00e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 1 MNLNMFEQFASPEILLLPTNIMSMLIPILL-IYTKPTLLGNRISTILNWFLKTALSNMINQLSLAGQKWSRFLMSLLLLI 79
Cdd:MTH00179 1 MMLSMFDQFESPSLLGIPLLALALLLPWLLfPSLTNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWAVLFLSLMLFL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 80 LLSNLLGLLPYTFTTTSQLSMNMAFAIPMWLGTVITGLTMKTSSSLAHMLPEGSPTPLIPFMILIETISLLMRPIALGVR 159
Cdd:MTH00179 81 LTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGVR 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 74310592 160 LTPNITAGHLLMTMISSAALSFINMYNTLSIMTMMLLMLLTLLEMAVACIQAYVFILLITLYLQENT 226
Cdd:MTH00179 161 LTANITAGHLLMHLISSAVFVLMNFMGMVALLTLLVLFLLTLLEVAVAMIQAYVFVLLLSLYLQENL 227
|
|
| ATP6 |
MTH00101 |
ATP synthase F0 subunit 6; Validated |
1-226 |
2.52e-59 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177163 Cd Length: 226 Bit Score: 186.31 E-value: 2.52e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 1 MNLNMFEQFASPEILLLPTNIMSMLIPILLIYTKPTLLGNRISTILNWFLKTALSNMINQLSLAGQKWSRFLMSLLLLIL 80
Cdd:MTH00101 1 MNENLFASFITPTILGLPIVTLIIMFPSLLFPTPNRLINNRLISIQQWLIQLTSKQMMTIHNTKGQTWSLMLMSLILFIG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 81 LSNLLGLLPYTFTTTSQLSMNMAFAIPMWLGTVITGLTMKTSSSLAHMLPEGSPTPLIPFMILIETISLLMRPIALGVRL 160
Cdd:MTH00101 81 STNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRL 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 74310592 161 TPNITAGHLLMTMISSAALSFINMYNTLSIMTMMLLMLLTLLEMAVACIQAYVFILLITLYLQENT 226
Cdd:MTH00101 161 TANITAGHLLIHLIGGATLALMSISTTTALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNT 226
|
|
| ATP6 |
MTH00035 |
ATP synthase F0 subunit 6; Validated |
1-225 |
4.41e-41 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177110 Cd Length: 229 Bit Score: 139.72 E-value: 4.41e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 1 MNLNMFEQFASPEILLLPTNIMSMLIPI--LLIYTKPTLLGNRISTILNWFLKTALSNMINQLSLAGQKWSRFLMSLLLL 78
Cdd:MTH00035 3 INNSIFGQFSPDTILFIPLTLLSSVIALswLFFINPTNWLPSRSQSIWLTFRQEILKLIFQNTNPNTAPWAGLLTTVFIL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 79 ILLSNLLGLLPYTFTTTSQLSMNMAFAIPMWLGTVITGLTMKTSSSLAHMLPEGSPTPLIPFMILIETISLLMRPIALGV 158
Cdd:MTH00035 83 ILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIALGL 162
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 74310592 159 RLTPNITAGHLLMTMISSAALSFINmYNTLSIMTMMLLMLLTLLEMAVACIQAYVFILLITLYLQEN 225
Cdd:MTH00035 163 RLAANLTAGHLLIFLLSTAIWELSN-SPLISIITLIIFFLLFILEIGVACIQAYVFTALVHFYLEQN 228
|
|
| ATP_synt_6_or_A |
TIGR01131 |
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ... |
6-225 |
8.81e-41 |
|
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]
Pssm-ID: 273458 Cd Length: 226 Bit Score: 138.88 E-value: 8.81e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 6 FEQFASPE--ILLLPTNIMSMLIPILLI----YTKPTLLGNRISTILNWFLKTALSNMINQLSLAGQKWSRFLMSLLLLI 79
Cdd:TIGR01131 2 FSQFDISPitLFSLTLLSLILLLSLLIFlissSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFI 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 80 LLSNLLGLLPYTFTTTSQLSMNMAFAIPMWLGTVITGLTMKTSSSLAHMLPEGSPTPLIPFMILIETISLLMRPIALGVR 159
Cdd:TIGR01131 82 LISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVR 161
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 74310592 160 LTPNITAGHLLMTMISSAALSfiNMYNTLSIMTMMLLMLLTLLEMAVACIQAYVFILLITLYLQEN 225
Cdd:TIGR01131 162 LFANISAGHLLLTLLSGLLFS--LMSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDA 225
|
|
| ATP6 |
MTH00157 |
ATP synthase F0 subunit 6; Provisional |
1-224 |
9.61e-40 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214441 Cd Length: 223 Bit Score: 136.07 E-value: 9.61e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 1 MNLNMFEQFASPEILLLPTNIMSMLIPILLIYTKPTLLGNRISTILNWFLKTALSNMINQLSLAGQKWSRFLMSLLLLIL 80
Cdd:MTH00157 1 MMTNLFSIFDPSTSFNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 81 LSNLLGLLPYTFTTTSQLSMNMAFAIPMWLGTVITGLTMKTSSSLAHMLPEGSPTPLIPFMILIETISLLMRPIALGVRL 160
Cdd:MTH00157 81 FNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRL 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 74310592 161 TPNITAGHLLMTMISSAALSFINMYNTLSImtmMLLMLLTLLEMAVACIQAYVFILLITLYLQE 224
Cdd:MTH00157 161 AANMIAGHLLLTLLGNTGPSLSSMILSILI---LIQILLLILESAVAIIQSYVFSVLSTLYSSE 221
|
|
| ATP6 |
MTH00173 |
ATP synthase F0 subunit 6; Provisional |
89-224 |
4.47e-32 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214448 Cd Length: 231 Bit Score: 116.50 E-value: 4.47e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 89 PYTFTTTSQLSMNMAFAIPMWLGTVITGLTMKTSSSLAHMLPEGSPTPLIPFMILIETISLLMRPIALGVRLTPNITAGH 168
Cdd:MTH00173 92 PFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLTVRLLANISAGH 171
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 74310592 169 LLMTMISSAALSFINMYNTLSIMTMMLLMLLTLL-EMAVACIQAYVFILLITLYLQE 224
Cdd:MTH00173 172 IVLTLIGNYLSSSLFSSSVVSLLLVLLIQVGYFIfEVAVMLIQAYIFTLLIKLYSDE 228
|
|
| ATP-synt_Fo_a_6 |
cd00310 |
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ... |
85-223 |
5.32e-31 |
|
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.
Pssm-ID: 349411 [Multi-domain] Cd Length: 156 Bit Score: 111.34 E-value: 5.32e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 85 LGLLPYTFTTTSQLSMNMAFAIPMWLGTVITGLTMKTSSSLAHMLPEGSPTPLIPFMILIETISLLMRPIALGVRLTPNI 164
Cdd:cd00310 21 LGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISELIRPLSLSVRLFANM 100
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 74310592 165 TAGHLLMTMISSAALSFINMyntLSIMTMMLLMLLTLLEMAVACIQAYVFILLITLYLQ 223
Cdd:cd00310 101 FAGHLLLALLSGLVPSLLSS---VGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
|
|
| ATP6 |
MTH00176 |
ATP synthase F0 subunit 6; Provisional |
1-226 |
5.00e-28 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214449 Cd Length: 229 Bit Score: 105.89 E-value: 5.00e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 1 MNLNMFEQFASPEILLLPTNIMSMLIPILLIYTKPTLLGNRISTILNWFLKTALSNMINQLSLAGQK---WSRFLMSLLL 77
Cdd:MTH00176 1 MLVDLFSSFDPPNKNIFSMISLSWITLLLFLLLMPSSVWFCPSKLQVFMLMFSTFLPEMILRSNGSYilgSASIIISLFI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 78 LILLSNLLGLLPYTFTTTSQLSMNMAFAIPMWLGTVITGLTMKTSSSLAHMLPEGSPTPLIPFMILIETISLLMRPIALG 157
Cdd:MTH00176 81 LVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTLA 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 74310592 158 VRLTPNITAGHLLMTMISSAALSFINMYNTLSIMTMMLLMLLTLLEMAVACIQAYVFILLITLYLQENT 226
Cdd:MTH00176 161 VRLAANLSAGHLLLGLLGAAMWGLLPVSPLIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDEHP 229
|
|
| ATP-synt_A |
pfam00119 |
ATP synthase A chain; |
89-223 |
1.54e-26 |
|
ATP synthase A chain;
Pssm-ID: 459679 [Multi-domain] Cd Length: 216 Bit Score: 101.80 E-value: 1.54e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 89 PYTFTTTSQLSMNMAFAIPMWLGTVITGL-TMKTSSSLAHMLPEGSPTPLIPFMILIETISLLMRPIALGVRLTPNITAG 167
Cdd:pfam00119 81 PGGFTVTADINVTLALALIVFLLVHYYGIkKHGLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAG 160
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 74310592 168 HLLMTMISSAALSFINMYNTLSIMTMMLLMLLTLLEMAVACIQAYVFILLITLYLQ 223
Cdd:pfam00119 161 HLLLLLLAGLIFALLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
|
|
| ATP6 |
MTH00172 |
ATP synthase F0 subunit 6; Provisional |
1-222 |
2.37e-24 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214447 Cd Length: 232 Bit Score: 96.26 E-value: 2.37e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 1 MNLNMFEQFASPEILLLPTNIMSMLIPI---LLIYTKPTLLGNRISTILNWFLKTALSNMINQLSLAGQKWSRFLMSLLL 77
Cdd:MTH00172 1 MSSSYFDQFNIVWLIGLTNSSIMMILVIivvLLLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFIISLFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 78 LILLSNLLGLLPYTFTTTSQLSMNMAFAIPMWLGTVITGLTMKTSSSLAHMLPEGSPTPLIPFMILIETISLLMRPIALG 157
Cdd:MTH00172 81 FIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLG 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 74310592 158 VRLTPNITAGHLLMTMISSAALSFINMYNTLSIMTMMLLMLLTLLEMAVACIQAYVFILLITLYL 222
Cdd:MTH00172 161 VRLAANLSAGHLLFAILAGFGFNMLCASGFLSLFPLLIMVFITLLEIAVAVIQAYVFCLLTTIYL 225
|
|
| ATP6 |
MTH00005 |
ATP synthase F0 subunit 6; Provisional |
9-226 |
4.01e-24 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 164583 Cd Length: 231 Bit Score: 95.57 E-value: 4.01e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 9 FASPEILLLPTNIMSMLIPILLIYTKPtllgNRISTILNWFLKTALSNMINQLSLAGQKWSRFLMSLLLLILLSNLLGLL 88
Cdd:MTH00005 18 NNLSSTAFWAFNFSIILLLSSSFWITP----NRLSSIMSPPKSTMHTQLSRTFGKHLKGFSSLISALFTMIILMNLSGLL 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 89 PYTFTTTSQLSMNMAFAIPMWLGTVITGLTMKTSSSLAHMLPEGSPTPLIPFMILIETISLLMRPIALGVRLTPNITAGH 168
Cdd:MTH00005 94 PYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPITLSFRLAANMSAGH 173
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 74310592 169 LLMTMISSAALSFINMYNTLSIMTMMLLMLLTLLEMAVACIQAYVFILLITLYLQENT 226
Cdd:MTH00005 174 IVLSLIGIYAASALFSSISSTILLILTQMGYILFEVGICLIQAYIFCLLLSLYSDDHP 231
|
|
| ATP6 |
MTH00175 |
ATP synthase F0 subunit 6; Provisional |
21-222 |
1.57e-22 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177228 Cd Length: 244 Bit Score: 91.61 E-value: 1.57e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 21 IMSMLIPILLIYTKPTLLGNRISTILNWFLKTALSNMINQLSLAGQKWSRFLMSLLLLILLSNLLGLLPYTFTTTSQLSM 100
Cdd:MTH00175 35 MVLAVIIFWLLLKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQKYFPFILSLFLFIAILNILGLFPYVFTPTAHIII 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 101 NMAFAIPMWLGTVITGLTMKTSSSLAHMLPEGSPTPLIPFMILIETISLLMRPIALGVRLTPNITAGHLLMTMISSAALS 180
Cdd:MTH00175 115 TFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIRAISLGVRLAANISAGHLLFAILSGFAFN 194
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 74310592 181 -FINMYNTLSIMTMMLLMLLTLLEMAVACIQAYVFILLITLYL 222
Cdd:MTH00175 195 mLSNGLIILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYL 237
|
|
| ATP6 |
MTH00174 |
ATP synthase F0 subunit 6; Provisional |
36-224 |
4.70e-16 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 133799 Cd Length: 252 Bit Score: 74.59 E-value: 4.70e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 36 TLLGNRISTILNWFLKTALSNMINQLSLAGQKWSRFLMSLLLLILLSNLLGLLPYTFTTTSQLSMNMAFAIPMWLGTVIT 115
Cdd:MTH00174 58 TLVPNRILVGLELIYSHFYTVLKDNLGNKGGNYLAFVLSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLA 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 116 GLTMKTSSSLAHMLPEGSPTPLIPFMILIETISLLMRPIALGVRLTPNITAGHLLMTMISSAALSFINMYNTL-SIMTMM 194
Cdd:MTH00174 138 GLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMINTGILIgSFVPFA 217
|
170 180 190
....*....|....*....|....*....|
gi 74310592 195 LLMLLTLLEMAVACIQAYVFILLITLYLQE 224
Cdd:MTH00174 218 ILIFVTILEMAVAIIQAYVFTLLTIVYLRD 247
|
|
| AtpB |
COG0356 |
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ... |
89-224 |
1.93e-15 |
|
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase
Pssm-ID: 440125 [Multi-domain] Cd Length: 212 Bit Score: 72.03 E-value: 1.93e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 89 PYTFTTTSQLSMNMAFAIPMWLGTVITGLTMK-TSSSLAHMLPEGSPtPLIPFMILIETISLLMRPIALGVRLTPNITAG 167
Cdd:COG0356 78 PGLFPPTADINVTLALALIVFVLVHYYGIKKKgLGGYLKHLFFPPFP-WLAPLMLPIEIISELARPLSLSLRLFGNMFAG 156
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 74310592 168 HLLMTMISSAALSFinmynTLSIMTMMLLMLLTLLEMAVACIQAYVFILLITLYLQE 224
Cdd:COG0356 157 HIILLLLAGLAPFL-----LLGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYISL 208
|
|
| PRK05815 |
PRK05815 |
F0F1 ATP synthase subunit A; Validated |
90-224 |
1.37e-13 |
|
F0F1 ATP synthase subunit A; Validated
Pssm-ID: 235617 Cd Length: 227 Bit Score: 67.13 E-value: 1.37e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 90 YTFTTTSQLSMNMAFAIPMWLGTVITGLTMKtssSLAHMLPEGSPTPlIPFMILIETISLLMRPIALGVRLTPNITAGHL 169
Cdd:PRK05815 95 LLFPPTADINVTLALALIVFVLVIYYGIKKK---GLGGYLKEFYLQP-HPLLLPIEIISEFSRPISLSLRLFGNMLAGEL 170
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 74310592 170 LMTMISSAALSFInmynTLSIMTMMLLMLLTLLEMAVACIQAYVFILLITLYLQE 224
Cdd:PRK05815 171 ILALIALLGGAGL----LLALAPLILPVAWTIFEIFVGTLQAYIFMMLTIVYISM 221
|
|
| ATP6 |
MTH00087 |
ATP synthase F0 subunit 6; Provisional |
89-224 |
1.56e-12 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177152 Cd Length: 195 Bit Score: 63.84 E-value: 1.56e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 89 PYTFTTTSQLSMNMAFAIPMWLGTVITglTMKTSSSLAHMLPEGSPTPLIPF-MILIETISLLMRPIALGVRLTPNITAG 167
Cdd:MTH00087 72 PYSFSPCGMVEFTFLYALVAWLSTFLS--FLSKSEKFSVYLSKGSDSFLKTFsMLFVEIVSELSRPLALTLRLTVNLMVG 149
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 74310592 168 HLLMTMIssaalsfinmyNTLSIMTMMLLMLLTLLEMAVACIQAYVFILLITLYLQE 224
Cdd:MTH00087 150 HLISSLL-----------NFLGEKYVWLSILAIMMECFVAFIQSYIFSRLIYLYLNE 195
|
|
| PRK13417 |
PRK13417 |
F0F1 ATP synthase subunit A; Provisional |
93-222 |
4.07e-09 |
|
F0F1 ATP synthase subunit A; Provisional
Pssm-ID: 237380 Cd Length: 352 Bit Score: 55.67 E-value: 4.07e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 93 TTTSQLSMNMAFAIPMWLGTVITGLTMKTSSSLAHMLPEGSPTPLIPFMILIETI-SLLMRPIALGVRLTPNITAGHLLM 171
Cdd:PRK13417 217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHVII 296
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 74310592 172 TmissAALSFINMYNTLSIMTMMLLMLLTL--LEMAVACIQAYVFILLITLYL 222
Cdd:PRK13417 297 L----ALMGFIFQFQSWGIVPVSVIGSGLIyvLEIFVAFLQAYIFVLLTSLFV 345
|
|
| PRK13419 |
PRK13419 |
F0F1 ATP synthase subunit A; Provisional |
89-222 |
8.41e-09 |
|
F0F1 ATP synthase subunit A; Provisional
Pssm-ID: 237381 Cd Length: 342 Bit Score: 54.75 E-value: 8.41e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 89 PYTFTTTSQLSMNMAFAIPMWLGTVITGL-TMKTSSSLAHmLPEGSPTPLIPFMILIETISLLMRPIALGVRLTPNITAG 167
Cdd:PRK13419 191 PYGATATGNINVTLTLAVFTFFITQYAAIkAHGIKGYLAH-LTGGTHWSLWIIMIPIEFIGLFTKPFALTVRLFANMTAG 269
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 74310592 168 HLLmtMISSAALSFI-NMYNTLSIMTMMLLMLLTLLEMAVACIQAYVFILLITLYL 222
Cdd:PRK13419 270 HIV--ILSLIFISFIlKSYIVAVAVSVPFAIFIYLLELFVAFLQAYIFTMLSALFI 323
|
|
| ATP6 |
MTH00050 |
ATP synthase F0 subunit 6; Validated |
106-185 |
9.52e-04 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177125 Cd Length: 170 Bit Score: 38.71 E-value: 9.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74310592 106 IPMWLGTVITGLTMKTSSSLAHMLPEGSPTPLIPFMILIETISLLMRPIALGVRLTPNITAGHLLMTMISSaaLSFINMY 185
Cdd:MTH00050 60 FPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFVCIAETISYIIRPVVLILRPFINISLGCFGGVALGN--LCFISYW 137
|
|
|