|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.67e-150 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 427.32 E-value: 1.67e-150
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 1 MSPYANTIITMSLIMGPLLTISSNHWILAWTGLEISTLAIIPLIAKQHHPRAIEAAIKYFLTQATASTLILFSSIINAWT 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 81 LGQWSIMQMSNNISCTILTAALAIKLGLAPFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLMMTVQSTNTPLMLTLGLM 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 161 SAIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSTKLMLLTFYTYIIMTSTTFLMIKLLETNKISTVMTSWTKLPTL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 241 NTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATSMAFLSLLSLFFYLRISYYATITLPPNSTNYLQQWRHKTS 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 84488634 321 QKHYLALMTTLSLSLLPITPTLLTIT 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
7.77e-137 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 392.63 E-value: 7.77e-137
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 1 MSPYANTIITMSLIMGPLLTISSNHWILAWTGLEISTLAIIPLIAKQHHPRAIEAAIKYFLTQATASTLILFSSIINAWT 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 81 LGQWSIMQMSNNISCTILTAALAIKLGLAPFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLMMtVQSTNTPLMLTLGLM 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQ-IAPTNPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 161 SAIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSTKLMLLTFYTYIIMTSTTFLMIKLLETNKISTVMTSWTKLPTL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 241 NTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATSMAFLSLLSLFFYLRISYYATITLPPNSTNYLQQWRHKTS 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|....*..
gi 84488634 321 QKHY-LALMTTLSLSLLPITPTLLTIT 346
Cdd:MTH00135 320 QLTLpLAISTTATLMLLPLTPAILALL 346
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
2.89e-129 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 373.49 E-value: 2.89e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 1 MSPYANTIITMSLIMGPLLTISSNHWILAWTGLEISTLAIIPLIAKQHHPRAIEAAIKYFLTQATASTLILFSSIINAWT 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 81 LGQWSIMQMSNNISCTILTAALAIKLGLAPFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLMMTVQSTNTPLMLTLGLM 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 161 SAIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSTKLMLLTFYTYIIMTSTTFLMIKLLETNKISTVMTSWTKLPTL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 241 NTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATSMAFLSLLSLFFYLRISYYATITLPPNSTNYLQQWRHKTS 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*
gi 84488634 321 QKHYLALMTTLSLSLLPITPTLLTI 345
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILNL 345
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
4.28e-113 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 332.20 E-value: 4.28e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 1 MSPYANTIITMSLIMGPLLTISSNHWILAWTGLEISTLAIIPLIAKQHHPRAIEAAIKYFLTQATASTLILFSSIINAWT 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 81 LGQWSIMQMSNNISCTILTAALAIKLGLAPFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLMMTVQSTNTPLMLTLGLM 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 161 SAIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSTKLMLLTFYTYIIMTSTTFLMIKLLETNKISTVMTSWTKLPTL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 241 NTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATSMAFLSLLSLFFYLRISYYATITLPPNSTNYLQQWRHK-T 319
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFEnT 320
|
330 340
....*....|....*....|....*..
gi 84488634 320 SQKHYLALMTTLSLSLLPITPTLLTIT 346
Cdd:MTH00105 321 KPMTLLPTLIILSTMLLPLTPMLSILE 347
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
5.54e-98 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 293.80 E-value: 5.54e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 1 MSPYANTIITMSLIMGPLLTISSNHWILAWTGLEISTLAIIPLIAKQHHPRAIEAAIKYFLTQATASTLILFSSIINAWT 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 81 LGQWSIMQMSNNISCTILTAALAIKLGLAPFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLMMTVQSTNTPLMLTLGLM 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 161 SAIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSTKLMLLTFYTYIIMTSTTFLMIKLLETNKISTVMTSWTKLPTL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 241 NTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATSMAFLSLLSLFFYLRISYYATITLPPNSTNYLQQWRHKTS 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 84488634 321 QKHYLALMTTLSLSLLPITPTLLTIT 346
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
12-324 |
2.23e-82 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 254.08 E-value: 2.23e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 12 SLIMGPLLTISSNHWILAWTGLEISTLAIIPLIAKQHHPRAIEAAIKYFLTQATASTLILFSSIINAWTLGQWSIMQMSN 91
Cdd:MTH00041 12 SIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGPLN 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 92 NISCTILTAALAIKLGLAPFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLMMTVQSTNTPLMLTLGLMSAIIGGWNGLN 171
Cdd:MTH00041 92 TLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGGWGGLN 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 172 QTQLRKIMAFSSIAHLGWMITILTLSTKLMLLTFYTYIIMTSTTFLMIKLLETNKISTVMTSWTKLPTLNTMMMLTLMSL 251
Cdd:MTH00041 172 QTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFILSILSL 251
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 84488634 252 AGLPPLTGFMPKWLIIQELTKQHMLIIATSMAFLSLLSLFFYLRISYYATITLPPNSTNYLQQWRHKTSQKHY 324
Cdd:MTH00041 252 GGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGNITVY 324
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-300 |
2.44e-57 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 188.88 E-value: 2.44e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 1 MSPYANTIITMSLIMGPLLTISSNHWILAWTGLEISTLAIIPLIAKQHHPRAIEAAIKYFLTQATASTLILFSSIINAwt 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNM-- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 81 lgqwSIMQMSNNISCTILTAALAIKLGLAPFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLMMTvqsTNTPLMLTLGLM 160
Cdd:MTH00160 80 ----LNLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 161 SAIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSTKLMLLTFYTYIIMTSTTFLMIKLLETNKISTVMTSWTKLPTL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 241 NTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATSMAFLSLLSLFFYLRISYYA 300
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSS 292
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
1-278 |
1.10e-52 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 176.62 E-value: 1.10e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 1 MSPYANTIITMSLIMGPLLTISSNHWILAWTGLEISTLAIIPLIAKQHHPRAIEAAIKYFLTQATASTLILFSSIINAWT 80
Cdd:MTH00144 1 MSSPSNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 81 LGQWSIMqmsnniscTILTAALAIKLGLAPFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLMMTVQSTNTPLML-TLGL 159
Cdd:MTH00144 81 SFSWFSM--------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLcVISV 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 160 MSAIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSTKLMLLTFYTYIImtSTTFLMIKLLETNKISTVMTSWTKLPT 239
Cdd:MTH00144 153 LSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIV--SSGFLFFSLWSGDSGSMKDLGSLKPSY 230
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 84488634 240 LNTM-MMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLII 278
Cdd:MTH00144 231 KTGLsIISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLL 270
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
12-278 |
1.36e-47 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 163.41 E-value: 1.36e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 12 SLIMGPLLTISSNHWILAWTGLEISTLAIIPLIAKQHHPRAIEAAIKYFLTQATASTLILFSSIInawtlgQWSIMQMSN 91
Cdd:MTH00011 14 TMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTM------MWSFPSLLK 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 92 NISCTILTAALAIKLGLAPFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLMMTVQSTNTPLMLTLGLMSAIIGGWNGLN 171
Cdd:MTH00011 88 NITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGGLGGMN 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 172 QTQLRKIMAFSSIAHLGWMITILTLSTKLMLLTFYTYIIMTSTTFLMIKLLETNKISTVMTSWTKLPTLNTMMMLTLMSL 251
Cdd:MTH00011 168 QTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLSL 247
|
250 260
....*....|....*....|....*..
gi 84488634 252 AGLPPLTGFMPKWLIIQELTKQHMLII 278
Cdd:MTH00011 248 GGLPPFTGFMPKLMAIETLTSNSMILI 274
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
12-279 |
8.57e-37 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 134.80 E-value: 8.57e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 12 SLIMGPLLTISSNHWILAWTGLEISTLAIIPLIAKQHHPRAIEAAIKYFLTQATASTLILFSSIINAWTLGQWSImqmsn 91
Cdd:MTH00197 6 IIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNLYLSLL----- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 92 niSCTILTAALAIKLGLAPFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLMMTvqSTNTPLMLTLGLMSAIIGGWNGLN 171
Cdd:MTH00197 81 --SVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFN--SSSFMGLLICSVLSSLIGGIGGMN 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 172 QTQLRKIMAFSSIAHLGWMITILTLSTKLMLLTFYTYIIMTSTTFLMIKLLETNKISTvMTSWTKLPTLNTM-MMLTLMS 250
Cdd:MTH00197 157 QSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQ-QYSNPESMSSNLVfLGLSFLS 235
|
250 260
....*....|....*....|....*....
gi 84488634 251 LAGLPPLTGFMPKWLIIQELTKQHMLIIA 279
Cdd:MTH00197 236 LGGLPPLSGFFLKWLILTSLLSSNISLIT 264
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-280 |
1.49e-29 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 114.72 E-value: 1.49e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 23 SNHWILAWTGLEISTLAIIPLIA-KQHHPRAIEAAIKYFLTQATASTLILFSSIINAWTLGQWSIMQMSNNISCTI---- 97
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGyWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 98 -------LTAALAIKLGLAPFHFWLPEVLQGT-TTTTALILTTWQKLAPL-----SLLMMTVQSTNTPLMLTLGLMSAII 164
Cdd:pfam00361 81 llllfllILVGFLFKSAQVPFHTWLPDAYEGApTPVSALLAATLVKAGGYglirrSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 165 GGWNGLNQTQLRKIMAFSSIAHLGWMITILTLST----KLMLLTFYTYIIMTSTTFLMIKLLETNKIST---VMTS--WT 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTiygiQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTrniRDYGglAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 84488634 236 KLPTLNTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIAT 280
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVL 285
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
14-279 |
1.65e-28 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 114.83 E-value: 1.65e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 14 IMGPLLTISSNHWILAWTGLEISTLAIIPLIA-KQHHPRAIEAAIKYFLTQATASTLILF-SSIINAWTlGQWSIMQMSN 91
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYGAT-GSLNLAGIAA 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 92 NIS------------CTILTAALAIKLGLAPFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLM-------MTVQSTNTP 152
Cdd:COG1007 191 ALAagganspllllgLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLrllveafPGLAADWQL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 153 LMLTLGLMSAIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSTKLML--LTFY--TYIIMTSTTFLMIKLLETNKIS 228
Cdd:COG1007 271 LLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVsaALFYllAYLFMNLGAFAVILLLSRKGGE 350
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 84488634 229 TV-MTSWTKL----PTLNTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIA 279
Cdd:COG1007 351 AEeIEDLAGLarrsPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLA 406
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-267 |
1.72e-28 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 113.59 E-value: 1.72e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 13 LIMGPLLTISSNHWILAWTGLEISTLAIIPLIA-KQHHPRAIEAAIKYFLTQATASTLILFS-------------SIINA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIAqNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 79 WTLGQWSIMQMSNNISCTILTAALAIKLGLAPFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLMMTvqSTNTPLMLTLG 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSI--GLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 159 LMSAIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTL----STKLMLLTFYTYIIMTSTTFLMIKLLETNKISTVMTS- 233
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIgsfeSIQASLVYLFIYIIMSICVFSIILALNVYKNLIIEFSg 239
|
250 260 270
....*....|....*....|....*....|....*
gi 84488634 234 -WTKLPTLNTMMMLTLMSLAGLPPLTGFMPKWLII 267
Cdd:MTH00196 240 lSRRLPILAITLALTFLSIAGIPPLVGFLGKWLIL 274
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-279 |
1.62e-26 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 109.53 E-value: 1.62e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 14 IMGPLLTISSNHWILAWTGLEISTLAIIPLIA-KQHHPRAIEAAIKYFLTQATASTLILF-SSIINAWTlGQWSIMQMSN 91
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYgMSLLYGAT-GSLSFAGIAK 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 92 NISCTI------------LTAALAIKLGLAPFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLM-------MTVQSTNTP 152
Cdd:PRK05777 192 ALADGSgnsllllfglvfLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLrllvvafGGLSEDWQQ 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 153 LMLTLGLMSAIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSTKLML--LTFY--TYIIMTSTTFLMIKLLETN-KI 227
Cdd:PRK05777 272 VLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsaVLFYllAYLFMTLGAFGVISLLRRKgGE 351
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 84488634 228 STVMTSWTKL----PTLNTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIA 279
Cdd:PRK05777 352 AESISDFAGLskrsPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLA 407
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
8-267 |
3.19e-25 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 105.48 E-value: 3.19e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 8 IITMSLIMGPLLTISSNHWILAWTGLEISTLAIIPLIA-KQHHPRAIEAAIKYFLTQATASTLILFSSIINAWTLGQWSI 86
Cdd:MTH00199 101 ILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSI 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 87 MQ----MSNNISCTILTAALAIKLGLAPFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLMMTVQSTNtpLMLTLGLMSA 162
Cdd:MTH00199 181 QGinsiLTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTN--VVLICAVLSI 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 163 IIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTL----STKLMLLTFYTYIIMTSTTFLMIKLLETNKISTVMTSWT--K 236
Cdd:MTH00199 259 IYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIgsfeSIQASLIYMIIYVIMSICSFSIILSLKLTKGLIVEVSGLsrK 338
|
250 260 270
....*....|....*....|....*....|.
gi 84488634 237 LPTLNTMMMLTLMSLAGLPPLTGFMPKWLII 267
Cdd:MTH00199 339 NPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
14-279 |
1.17e-23 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 101.18 E-value: 1.17e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 14 IMGPLLTISSNHWILAWTGLEISTLAIIPLIA-KQHHPRAIEAAIKYFLTQATASTLILF-SSIINAWT-------LGQW 84
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFgISLIYGFTgslnfedLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 85 SIMQMSNNISCTI----LTAALAIKLGLAPFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLM-------MTVQSTNTPL 153
Cdd:TIGR01770 192 LSNGMLNISLLLLgivlILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLrlflyilFGFSEAWQIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 154 MLTLGLMSAIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSTKL----MLLTFYTYIIMTSTTFLMIKLLETNK--- 226
Cdd:TIGR01770 272 LAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEgikaVLFYIFIYALMSLGAFGVLSLLRSYKdew 351
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 84488634 227 ---ISTVMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIA 279
Cdd:TIGR01770 352 ieyISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLA 407
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
13-279 |
5.41e-22 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 95.98 E-value: 5.41e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 13 LIMGPLLTISSNHWILAWTGLEISTLAIIPLIAKQHHPRAIEAAIKYFLTQATASTLILFSSIINAWTLGQWSIMQMSNN 92
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAR 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 93 IS----------CTILTAALAIKLGLAPFHFWLPE-----------VLQGTTTttalilttwqKLAPLSLLMM------- 144
Cdd:COG0651 196 LAeldpglllaaFALLLVGFGIKAALFPLHFWLPDaypaapspvsaLLSGLLT----------KVGVYAILRVltllfga 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 145 TVQSTNTPLMLTLGLMSAIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSTKLMLLTFYTYII----MTSTTFL--- 217
Cdd:COG0651 266 DPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLnhalAKALLFLaag 345
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 84488634 218 -MIKLLETNKISTVMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIA 279
Cdd:COG0651 346 aIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLA 408
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
15-267 |
6.86e-17 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 81.83 E-value: 6.86e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 15 MGPLLTISSNHWILAWTGLEISTLAIIPLIAKQHHPRAI---------EAAIKYFLTQATASTLILFS------------ 73
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGcalyfgftgneg 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 74 ---SIINAwTLGQWSIMQMSNNISCTILTAALAIKLGLAPFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLMMTVQSTN 150
Cdd:MTH00198 279 mlgTILSA-TLETTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILLTSLVITSK 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 151 tpLMLTLGLMSAIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSTKLMLLTFYTYIIMTSTT----FLMIKLLETNK 226
Cdd:MTH00198 358 --LLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTYLVSalasFTVICTLEEFG 435
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 84488634 227 ISTV-----------------MTSWTKL----PTLNTMMMLTLMSLAGLPPLTGFMPKWLII 267
Cdd:MTH00198 436 TRTPtsrqrdgsfgnynlvrrLVDLTILsrgqPYIAFSLAIVFLSLAGIPPLLGFLGKWFIL 497
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-263 |
1.07e-12 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 68.88 E-value: 1.07e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 51 RAIEAAIKYFLTQATASTLIL--FSSI--INAWTLGQWSI------MQMSNNISCTI----LTAALAIKLGLAPFHFWLP 116
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVygFSWLygLSGGEIELQEIvnglinTQMYNSPGISIalifITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 117 EVLQGTTTTTALILTTWQKLAPLSL------LMMTVQSTNTPLMLT-LGLMSAIIGGWNGLNQTQLRKIMAFSSIAHLGW 189
Cdd:CHL00049 239 DVYEGSPTPVVAFLSVTSKVAASALatrifdIPFYFSSNEWHLLLEiLAILSMILGNLIAITQTSMKRMLAYSSIGQIGY 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 190 -MITILTLSTKL----MLLTFYTYIIMTSTTFLMIKLLE----TNKISTVMTSWTKLPTLNTMMMLTLMSLAGLPPLTGF 260
Cdd:CHL00049 319 vIIGIIVGDSNDgyasMITYMLFYIFMNLGTFACIVLFGlrtgTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGF 398
|
...
gi 84488634 261 MPK 263
Cdd:CHL00049 399 FGK 401
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
1.86e-12 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 68.15 E-value: 1.86e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 50 PRAIEAAIKYFLTQATASTLILF-SSIINAWTLGQWSIMQMSNN----------ISCTILTAALAIKLGLAPFHFWLPEV 118
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGSTQLSAIALAlitspslglaLALVFVIAGIAFKISAVPFHQWTPDV 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 119 LQGTTTTTALILTTWQKLAPLSL---LMMTVQSTNTP----LMLTLGLMSAIIGGWNGLNQTQLRKIMAFSSIAHLGWMI 191
Cdd:PRK02504 237 YEGSPTPVVAFLSVGSKAAGFALairLLVTAFPSFDEqwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVM 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 192 TILTLSTK----LMLLTFYTYIIMTSTTFLMIKLLE----TNKISTVMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFMPK 263
Cdd:PRK02504 317 IGLVAGTEagyaSMVFYLLAYLFMNLGAFACVILFSlrtgTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
38-267 |
2.01e-11 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 64.72 E-value: 2.01e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 38 LAIIP---LIAKQHHPRAIEAAIKYFLTQATASTLILFSSIINAWTLGQWS--IMQMSN-NISCTI-------LTAALAI 104
Cdd:COG1008 142 LMLIPmyfLIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTfdIAELAAaPLPLTAqlllflaFFIAFAV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 105 KLGLAPFHFWLPE-----------VLQGTTTttalilttwqKLAP-----LSLLMMTVQS-TNTPLMLTLGLMSAIIGGW 167
Cdd:COG1008 222 KVPMFPFHTWLPDahveaptagsvLLAGVLL----------KMGGygllrFALPLFPEASaYFAPLLAALGVIGIIYGAL 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 168 NGLNQTQLRKIMAFSSIAHLGWMITILTLSTKL-----MLLTFyTYIIMTSTTFLMIKLLE----TNKISTVMTSWTKLP 238
Cdd:COG1008 292 VALAQTDLKRLIAYSSVSHMGFVLLGIFALNPLglqgaVLQMV-SHGLITAALFLLVGVLYdrthTRDIADLGGLAKRMP 370
|
250 260
....*....|....*....|....*....
gi 84488634 239 TLNTMMMLTLMSLAGLPPLTGFMPKWLII 267
Cdd:COG1008 371 VLAALFLLAALASLGLPGTSGFVGEFLVL 399
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-268 |
5.48e-11 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 63.42 E-value: 5.48e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 50 PRAIEAAIKYFLTQATASTLILFSSIINAW-TLGQWSIMQMSN-NISCTILT-------AALAIKLGLAPFHFWLPEV-L 119
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFlGGGTFDLLELLNlPLPFGVQTwlflaffIAFAVKVPLFPLHTWLPDAhV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 120 QGTTTTTALILTTWQKLAPLSLLMMTVQ------STNTPLMLTLGLMSAIIGGWNGLNQTQLRKIMAFSSIAHLGW-MIT 192
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTYGFLRFNLPlfpdasLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFvLLG 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 193 ILTLSTKLMLLTFYTYI---IMTSTTFLMIKLLE----TNKISTVMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFMPKWL 265
Cdd:TIGR01972 312 IFSFNELGISGAVFQMIshgLITAALFLLVGVLYerahTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFL 391
|
...
gi 84488634 266 IIQ 268
Cdd:TIGR01972 392 ILL 394
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
34-282 |
5.55e-11 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 63.48 E-value: 5.55e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 34 EISTLA---IIPLIAKqhhpRAIEAAIKYFLTQATASTLILFSSIINAWTLGQWSIMQMSNNISCT-----------ILT 99
Cdd:PRK08668 128 EIMTFSsfmMVPMGKK----ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADISQGLINDtstgfalivflFLL 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 100 AALAIKLGLAPFHFWLPE-----------VLQGTTTTT--ALILTTWQKLAPLSLL--MMTVQSTNTP--LMLTLGLMSA 162
Cdd:PRK08668 204 AFGVAKAGIFPLHVWAPDayseapqsfsaVLSGQLSKLgaYGFLLVLYVLPGTKLFseFGTYRGVPLFnyILAWLGNISI 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 163 IIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSTKL------------------MLLTFYTYIIMTSTTflmikllet 224
Cdd:PRK08668 284 IVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLgfagglfhvfnhalfkglFFLIFAAVIYRTGTT--------- 354
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 84488634 225 nKISTVMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATSM 282
Cdd:PRK08668 355 -KISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMA 411
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
8.46e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 62.81 E-value: 8.46e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 33 LEISTLAIIPLIAKQHH-PRAIEAAIKYFLTQATASTLILFSSII-----NAWTLGQWSI-MQMS----NNISCTILTAA 101
Cdd:PRK08376 150 LEIMSIASYALVAFRNDtWEAIEAGIKYMFVGSLASSMVLLGIALlygqyGTLNMAYLAVkMSENptvvAKIALALFIAG 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 102 LAIKLGLAPFHFWLPEVlQGTTTTTALILTTWQKLAPLSLLMMTVQSTNTP---------LMLTLGLMSAIIGGWNGLNQ 172
Cdd:PRK08376 230 LAMKSGAVPVHMWLPDA-YPAAPSSISAMLLVIKQAGLYALARVLFSIYGPainlatvgwVIIILGCLTMFVGVAMAVVQ 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 173 TQLRKIMAFSSIAHLGWM-----ITILTLSTKLM-----------LLTFYTYIIMTSTTFL----MIKLLETNKISTVMT 232
Cdd:PRK08376 309 KDVKRLLAYHSVSQIGYMllglgVGLAALGDPAMasygeialaggIYHIVNHALYKALLFLtagaVIYETGTRNLNELGG 388
|
250 260 270
....*....|....*....|....*....|....
gi 84488634 233 SWTKLPTLNTMMMLTLMSLAGLPPLTGFMPKWLI 266
Cdd:PRK08376 389 LARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
18-279 |
6.29e-10 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 60.33 E-value: 6.29e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 18 LLTISSNHWILAWTGLEISTLAIIPLIAKQHHPRAIEAAIKYFLTQATASTLILFSSII---NAWTL-------GQWS-I 86
Cdd:PRK06458 122 LLALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFGTILvyaNAATVmgdgemaILWTeL 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 87 MQMSNNISCTILTAALAI-------KLGLAPFHFWLPE-----------VLQGTttttalilttwqkLAPLSLL------ 142
Cdd:PRK06458 202 LKHASLLDPTLMKLAFVFlligfgtKVGLFPMHAWLPDahseapspvsaLLSGV-------------LLNVALYavlryy 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 143 MMTVQSTNT----PLMLTLGLMSAIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSTKLMLLTFYTYIIMTSTTFLM 218
Cdd:PRK06458 269 ILIDAAIGSdfpgRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSA 348
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 84488634 219 I--------KLLETNKISTVMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIA 279
Cdd:PRK06458 349 IffasgnvlQKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIA 417
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
96-263 |
9.50e-10 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 60.06 E-value: 9.50e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 96 TILTAALAIKLGLA--------PFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLMM--TVQSTNTP---LMLTLGLMSA 162
Cdd:PRK12650 204 PGLTTVVAVLIAVAaftksaqfPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRfsPVFHDVAVwnwLLIIVGMITA 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 163 IIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSTKLMLLTFYTYII----MTSTTFLMIKLLE----TNKISTVMTSW 234
Cdd:PRK12650 284 LMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLahalFKSSLFMLIGVVDhqagTRDIRRLGSLW 363
|
170 180
....*....|....*....|....*....
gi 84488634 235 TKLPTLNTMMMLTLMSLAGLPPLTGFMPK 263
Cdd:PRK12650 364 RRMPFTFVSVTIAALSMAAVPPLFGFVSK 392
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-307 |
1.58e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 58.74 E-value: 1.58e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 33 LEISTLAIIPLIAKQHHPRAIEAAIKYFLTQATASTLILFSSIINAWTLGQWSIMQMSNNI--SCTILTA------ALAI 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALaeNPTVVTAfgfvllALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 105 KLGLAPFHFWLPEVLQGTTTTTALILTTWQKLAP---LSLLMMTV-------QSTNTPLMLTLGLMSAIIGGWNGLNQTQ 174
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAvyaLIRIYFTVfggdfrfALGLGWLLAVLALLSMLVGSLAALGQDD 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 175 LRKIMAFSSIAHLGWMITILTLSTKLMLL--TFYT--YIIMTSTTFLMIKLLETNKISTVMTSWTKL----PTLNTMMML 246
Cdd:PRK08375 295 VKRVLAYSTVSQMGYILLGLALLTPLALAagLLHLlhHALMKGALFLAAGAIEVTYGTRRLSELSGLgrrmPLTAAAFAV 374
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 84488634 247 TLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATSMAFLSLLSLFFYLRISYYATITLPPN 307
Cdd:PRK08375 375 ASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGPPPP 435
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-279 |
1.75e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 58.83 E-value: 1.75e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 33 LEISTLAIIPLIA-KQHHPRAIEAAIKYFLTQATASTL------ILFSSI-------INAWTLGQWSIMQMS---NNISC 95
Cdd:PRK12667 142 LEVLSISAYGLVAyYRDRGDAVEAAIKYALIGAVGTTLyflalaFLYATFgtlnmadLSAKIRGLSFPLTGGlagNPPLA 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 96 TILTAALA-----IKLGLAPFHFWLPEVLQGTTTTTAlilttwqklAPLSLLMMTV----------------------QS 148
Cdd:PRK12667 222 LGVALALAlwaftIKAAIFPNHFWLPDAHPAAPSPVS---------AMLSGLVVNVgayaiirflytifgispslidfRA 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 149 TNTPLMLTLGLMSAIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSTKLMLLTFYTYII----------MTSTTFlm 218
Cdd:PRK12667 293 ALSPILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIInhaiaksllfLASGVF-- 370
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 84488634 219 IKLLETNKISTVMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIA 279
Cdd:PRK12667 371 IHAAGTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPA 431
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
38-266 |
4.58e-08 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 54.32 E-value: 4.58e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 38 LAIIPL---IAKQHHPRAIEAAIKYFLTQATASTLILFSSIINAWTLGQWSI---MQMSNNISCTI-------LTAALAI 104
Cdd:PRK06473 138 LELIPLyllIAIWGGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFdyePLRSHTLPLSTqllllapILVGFGI 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 105 KLGLAPFHFWLPEV-LQGTTTTTALILTTWQKLAPLSLLMMTVQ------STNTPLMLTLGLMSAIIGGWNGLNQTQLRK 177
Cdd:PRK06473 218 KIPLVPFHTWLPDAhVEASTPVSVLLAGVLLKLGTYGLLRFGVGlfpeawVYLAPWLATWAVVSVLYGASCAIAQKDMKK 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 178 IMAFSSIAHLGWMITILTLSTKLMLLT----FYTYIIMTSTTFLMIKLL-------ETNKISTVMTSWTKLPTLNTMMML 246
Cdd:PRK06473 298 MVAYSSIGHMGYILLAAAAATPLSILAavfqMISHGLISALLFLLVGVVykktgsrDVDVLRGLLNPERGLPITGSLMIL 377
|
250 260
....*....|....*....|
gi 84488634 247 TLMSLAGLPPLTGFMPKWLI 266
Cdd:PRK06473 378 GVMASAGIPGMVGFIAEFLV 397
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
97-268 |
2.29e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 52.28 E-value: 2.29e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 97 ILTAALAIKLGLAPFHFWLPE-----------VLQGTTTttalilttwqKLAPLSL-----LMMTVQSTNTPLMLtLGLM 160
Cdd:PRK12665 214 VLLVAFGIKAAVFPLSFWLPDsyptapapvtaVFAGLLT----------KVGVYAIirthtLLFPGGGLDTLLMV-VALL 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 161 SAIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSTKLML--LTFYT--YIIMTSTTFLMIKLLETNKISTVMTSWTK 236
Cdd:PRK12665 283 TMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLsgAIYYVahHITVQTTLFLVVGLIERQAGSSSLRRLGG 362
|
170 180 190
....*....|....*....|....*....|....*.
gi 84488634 237 L----PTLNTMMMLTLMSLAGLPPLTGFMPKWLIIQ 268
Cdd:PRK12665 363 LakasPLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
96-268 |
3.46e-07 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 51.64 E-value: 3.46e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 96 TILTAALAIKLGLAPFHFWLPEV-LQGTTTTTALILTTWQKLAPLSLLMMTVQ------STNTPLMLTLGLMSAIIGGWN 168
Cdd:PRK07363 209 TGLLLGFGIKIPLVPLHTWLPDAyTEASPAVAILLGGVLAKLGTYGLLRFGLQlfpqtwSLVAPGLAIIGTISVIYGALS 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 169 GLNQTQLRKIMAFSSIAHLGWMITILTLSTKLMLL----TFYTYIIMTSTTFLMIKLLET-------NKISTVMTSWTKL 237
Cdd:PRK07363 289 AIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLgavaQMISHGLILALLFHLVGIVERkvgtrdlDVLNGLMNPIRGL 368
|
170 180 190
....*....|....*....|....*....|.
gi 84488634 238 PTLNTMMMLTLMSLAGLPPLTGFMPKWLIIQ 268
Cdd:PRK07363 369 PLTSALLVLAGMASAGIPGLVGFVAEFIVFQ 399
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
11-270 |
4.93e-07 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 51.31 E-value: 4.93e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 11 MSLIMGPLLTI-SSNHWILAWTGLEISTLAIIPLIA-KQHHPRAIEAAIKYFLTQATASTLILFSSIINAWTLGQWSIMQ 88
Cdd:COG1009 117 LLLFMAAMLGLvLSDNLLLLFVFWELVGLCSYLLIGfWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSE 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 89 MSNNI-----SCTILTAALAI------KLGLAPFHFWLPE-----------------VLQGTTTttalilttwqkLAPLS 140
Cdd:COG1009 197 LLAAAptilsSPLLTLILLLLllgafgKSAQFPLHFWLPDamegptpvsallhaatmVKAGVYL-----------LARLS 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 141 LLMMTVQSTNTpLMLTLGLMSAIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLS-TKLMLLTFYTYIIMTSTTFLM- 218
Cdd:COG1009 266 PLFALSPVWLT-VVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGaYVAALFHLLTHAFFKALLFLGa 344
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 84488634 219 ---IKLLETNKISTVMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFMPKWLIIQEL 270
Cdd:COG1009 345 gsvIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAA 399
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
97-263 |
7.65e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 51.08 E-value: 7.65e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 97 ILTAALAiKLGLAPFHFWLPE-----------------VLQGTTTTTalilttwqKLAPlsllMMTVQSTNTPLMLTLGL 159
Cdd:PRK12644 209 ILVGALS-KSAIVPFHFWLPGamaaptpvsaylhaaamVKAGIYLVA--------RLAP----GFADVPVWRPTVLVLGL 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 160 MSAIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSTKLMLLTFYTYII----MTSTTFLMIKLL-------ETNKIS 228
Cdd:PRK12644 276 ATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLahalFKAALFLVVGIIdhstgtrDIRKLS 355
|
170 180 190
....*....|....*....|....*....|....*
gi 84488634 229 TVmtsWTKLPTLNTMMMLTLMSLAGLPPLTGFMPK 263
Cdd:PRK12644 356 GL---GRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
154-274 |
2.99e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 48.58 E-value: 2.99e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 154 MLTLGLMSAIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSTKLMLLTFYTYII---MTSTTFLMIK-----LLETN 225
Cdd:PRK12662 282 FMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVnhsIVKSALFMVSgsisyHFGTT 361
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 84488634 226 KISTVMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQH 274
Cdd:PRK12662 362 KLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSN 410
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
13-276 |
3.14e-06 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 49.07 E-value: 3.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 13 LIMGPLL-TISSNHWILAWTGLEISTLAIIPLIAKQHH-PRAIEAAIKYFLTQATASTLILFSSIINAWTLGQWSIMQMS 90
Cdd:TIGR00940 114 AFMGAMLgVVLSDNLILLYVFWELTSIVSFLLISYWHHrAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIDAVI 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 91 NNISCT-----ILTAALAIKLGLA------PFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLM-MTVQSTNTP----LM 154
Cdd:TIGR00940 194 ASADAIrnsplFGTAMVLVLLGAFtksaqfPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLArFTPVFAGTEawfwIV 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 155 LTLGLMSAIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTL-STKLMLLTFYTYIIMTSTTFLMIKLLE--TNKISTVM 231
Cdd:TIGR00940 274 GLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGLgSPSYHYQGDDSKIYALAAVAAVFHLINhaTFKGSLFM 353
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 84488634 232 TS------------------WTKLPTLNTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHML 276
Cdd:TIGR00940 354 AAgiidhetgtrdirklgglFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAEAITAHLV 416
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
19-202 |
4.02e-06 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 48.21 E-value: 4.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 19 LTISSNHWILAWTGLEISTLAIIPLIAKQHHPRAIEAAIKYFLTQATA------STLILFSSIINAW---TLGQWSIMQM 89
Cdd:PRK08676 117 FAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALgtgTLNWTELAAH 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 90 SNNISCTILTAA-------LAIKLGLAPFHFWLPEV-LQGTTTTTALILTTWQKLAPLSLLMMT-------VQSTNTPLM 154
Cdd:PRK08676 197 ASLLSPSVLGASflfifigFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSallrqsgAAEQFSNVL 276
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 84488634 155 LTLGLMSAIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSTKLML 202
Cdd:PRK08676 277 IGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLAL 324
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-267 |
5.64e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 47.99 E-value: 5.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 101 ALAIKLGLAPFHFWLPE------VLQGTTTTTALILTTWQKLAPLSLLMMTVQSTN-TPLMLTLGLMSAIIGGWNGLNQT 173
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKahveapVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNlAPAVIAMGIVGIVYGSFATCRQI 318
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 174 QLRKIMAFSSIAHLGwMITILTLSTKLMLLTFYTYI-----IMTSTTFLMIKLL----ETNKISTVMTSWTKLPTLNTMM 244
Cdd:MTH00226 319 DVKRLVAYSSVAHMG-LVSITLVTHDIIGLTGSIFImlahgIVSSLLFILVTILydrhHTRLIKYYRGLSITMPIWGTIM 397
|
170 180
....*....|....*....|...
gi 84488634 245 MLTLMSLAGLPPLTGFMPKWLII 267
Cdd:MTH00226 398 IVTSLANVAVPPSGNFIGEYLSI 420
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
34-267 |
2.78e-05 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 45.58 E-value: 2.78e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 34 EISTLAIIPLIAKQHHPRAIEAAIKYFLTQATASTLILFSSI----INAWTLGQWSIMQ-MSNNISCTILT-------AA 101
Cdd:PRK05846 141 EAMLIPMYFLIGVWGGKNRIYAATKFFLYTLLGSLLMLVAIIylvvVYYNATGTFDIADlLNLPLPPGVQYwlflaffIA 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 102 LAIKLGLAPFHFWLPEV-LQGTTTTTALILTTWQKLAP-----LSLLMMTVQSTN-TPLMLTLGLMSAIIGGWNGLNQTQ 174
Cdd:PRK05846 221 FAVKMPMFPLHTWLPDAhVQAPTAGSVLLAGILLKMGAygllrFSLPLFPDASHEfAPIIITLGVIAIIYGALVALAQTD 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 175 LRKIMAFSSIAHLGWMITILTLSTKLML--LTFYT--YIIMTSTTFLMIKLLETNKISTVMTS----WTKLPTLNTMMML 246
Cdd:PRK05846 301 IKKLIAYSSISHMGFVTLGIFAGNQLGIqgAIFQMisHGLSSAALFLLVGVLYDRLHTRDIADygglAKVMPVLAAFFLF 380
|
250 260
....*....|....*....|.
gi 84488634 247 TLMSLAGLPPLTGFMPKWLII 267
Cdd:PRK05846 381 FAMASLGLPGTSGFVGEFLIL 401
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
136-279 |
5.42e-05 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 45.07 E-value: 5.42e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 136 LAPLSLLMMTVqstntplmltLGLMSAIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLST------KLMLLTFYTYI 209
Cdd:MTH00020 269 QAPLALIIVTI----------VGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHysislfHLMNHAFFKAL 338
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 210 IMTSTTFLMIKLLETNKISTVMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIA 279
Cdd:MTH00020 339 LFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFA 408
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
110-266 |
5.76e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 44.91 E-value: 5.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 110 PFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLMM--TVQSTNTPLMLTLGLMSA---IIGGWNGLNQTQLRKIMAFSSI 184
Cdd:PRK12647 213 PFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARlnPVLGGTPLWQTILPLFGGltmLTGALLAVRQTDLKLILAYSTV 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 185 AHLGWMITILTLSTKLMLLTFYTYIIMTS----TTFLMIKLLETnkiSTVMTSWTKLPTLNTMMMLTLM-------SLAG 253
Cdd:PRK12647 293 SALGTLVMLLGLGSELAIKAAVLFLVAHSlykgALFMVAGIIDH---ETGTRDITKLGGLRRAMPITAAaallaalSMAG 369
|
170
....*....|...
gi 84488634 254 LPPLTGFMPKWLI 266
Cdd:PRK12647 370 LPPLFGFLAKELI 382
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
137-268 |
7.07e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 44.56 E-value: 7.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 137 APLSLLMMTVqstntplmltLGLMSAIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTL--STKLMLLTFYTYIIMTST 214
Cdd:MTH00032 285 APLTLLIITI----------FGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIegSHNVGLFHLVNHAFFKAL 354
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 84488634 215 TFL---------MIKLLETNKISTVMTSwtkLPTLNTMMMLTLMSLAGLPPLTGFMPKWLIIQ 268
Cdd:MTH00032 355 LFLsagsvihstTVDEQDMRKMGGLIHS---IPFTYTMMLIGSFSIMGLPYLTGFYSKDLILE 414
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
1.69e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 43.40 E-value: 1.69e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 33 LEISTLAIIPLIAKQHHPRAIEAAIKYFLTQATASTLILFSSIINAWTLGQWSI--MQMSNNISCTILTAALAIKLGLAP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFsgLATADPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 111 FHFWLPE-----------VLQGTTTttalilttwqKLAPLSLLMMTVQSTNTPLMLTL-GLMSAIIGGWNGLNQTQLRKI 178
Cdd:PRK07234 203 SGLWLPLthseaeppvsaLLSGVVV----------KAGVFPLVRCALDVPGLDLIVRIfGVGTALLGVLFALLEKDLKRM 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 179 MAFSSIAHLGWMIT------ILTLSTKLMLLT-FYTYIIMTSTTFlmiklleTNKISTVMTSWTKLPtlntmMMLTLMSL 251
Cdd:PRK07234 273 LAFSTISQLGFILAaplvggLYALAHGLVKSTlFLCAGALPSRNF-------TELISQMLGIGKWIP-----LTMASFSI 340
|
250 260
....*....|....*....|
gi 84488634 252 AGLPPLTGFMPKWLIIQELT 271
Cdd:PRK07234 341 AGFPLLAGFVSKVLTLKNLL 360
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-268 |
1.79e-04 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 43.10 E-value: 1.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 34 EISTLAIIPLIAKQHHPRAIEAAIKYFLTQATASTLILFSSIINAWTLGQWSIMQMSNNI-----SCTILTAALAIKLGL 108
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDIHNALlvnptSPVIYGGLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 109 A------PFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLMMTVQSTNTP--------LMLTLGLMSAIIGGWNGLNQTQ 174
Cdd:PRK06277 210 LygsglpPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIFKLFGGLsyfpsaqgVLIALSVLAMVFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 175 LRKIMAFSSIAHLGWMITILTLSTKLM----LLTFYTYIIMTSTTFLMIKLLE----TNKISTVMTSWTKLPTLNTMMML 246
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGivagIFHAINHVIYKSALFLGAGIVSyrtkTSNLRKLGGLLPVMPVVAFMVLC 369
|
250 260
....*....|....*....|..
gi 84488634 247 TLMSLAGLPPLTGFMPKWLIIQ 268
Cdd:PRK06277 370 AKLAISGVPPFNGFQSKLMLAQ 391
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
110-272 |
4.34e-04 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 42.05 E-value: 4.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 110 PFHFWLPEVLQGTTTTTALILTTWQKLAPLSLL-----MMTVQSTNTPLMLTLGLMSAIIGGWNGLNQTQLRKIMAFSSI 184
Cdd:PRK12646 228 PFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLfrftpLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTI 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 185 AHLGWMITILTL------STKLMLLTFYTYIIMTSTTFLMIKLL----------------ETNKISTVMTSWTKLPTLNT 242
Cdd:PRK12646 308 SQLGMIMAMVGIgggyaqHQQDAIASIYVFVLFAALFHLMNHAIfkcalfmgvgiidheaGTRDIRILSGMRQLFPKMNL 387
|
170 180 190
....*....|....*....|....*....|
gi 84488634 243 MMMLTLMSLAGLPPLTGFMPKWLIIQELTK 272
Cdd:PRK12646 388 VMTIAALSMAGVPFLNGFLSKEMFLDALTQ 417
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
107-272 |
7.10e-04 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 41.35 E-value: 7.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 107 GLAPFHFWLPEV-LQGTTTTTALILTTWQKLAPLSLLMMTVQSTNTPL-----MLTLGLMSAIIGGWNGLNQTQLRKIMA 180
Cdd:PRK08042 195 GIIPLHGWVPQAhANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLwwgvaLLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 181 FSSIAHLGWMIT--------ILTLSTKLMLLTF-------YTYIIMTSTTFL-------MIKLLETNKISTVmtsWTKLP 238
Cdd:PRK08042 275 YHTLENIGIILLglgagvtgIALEQPALIALGLvgglyhlLNHSLFKSVLFLgagsvwfRTGHRDIEKLGGI---GKKMP 351
|
170 180 190
....*....|....*....|....*....|....
gi 84488634 239 TLNTMMMLTLMSLAGLPPLTGFMPKWLIIQELTK 272
Cdd:PRK08042 352 VISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
55-270 |
7.71e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 41.25 E-value: 7.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 55 AAIKYF-LTQAtaSTLILFSSII------NAWTLGQWSIMQMSNNISCTILTAALAIKLGLAPFHFWLPEVLQGTTTTTA 127
Cdd:PRK08667 163 AGIFYFvMTQL--STVFLMLGIIvlfiqtGSFELSPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVS 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 128 LILTTWQKLAPLSLLMMTVQSTNTP------LMLTLGLMSAIIGGWNGLNQTQLRKIMAFSSIAHLG--------WMITI 193
Cdd:PRK08667 241 ALMSGVMLKVAVYGLVRFLMDVLSPelwwgvLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGiilmgiglYVIFG 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 194 LTLSTKLMLLTFYTYIIMTSTTFLMIKLLETNKISTVMTSWTK-----------LPTLNTMMMLTLMSLAGLPPLTGFMP 262
Cdd:PRK08667 321 VYGLDTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGTRniekmgglvklMPYTSALFLVGAVSIAALPPFNGFAS 400
|
....*...
gi 84488634 263 KWLIIQEL 270
Cdd:PRK08667 401 ELLLYESF 408
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
27-282 |
1.12e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 40.90 E-value: 1.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 27 ILAWTGLEISTLAiipLIAKQHHPRAIEAAIKYFLTQATASTLILFSSiinAWTLGQ--WSIMQM-----SNNISCTILT 99
Cdd:MTH00207 114 LLGWDGLGLVSFI---LVIYYQNPKSLGAGMITALTNRIGDVMLLLSI---GWTLNQghWSITNMwqtdmNNYIALSIMI 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 100 AALAiKLGLAPFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLM-----MTVQSTNTPLMLTLGLMSAIIGGWNGLNQTQ 174
Cdd:MTH00207 188 AAMT-KSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIrfypfLSSTYWFNPALLLTASLTMLMAGLSAMTECD 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 175 LRKIMAFSSIAHLGWMITILTLS-TKLMLLTFYTYIIMTSTTFL----MIKL-LETNKISTVMTSWTKLPTLNTMMMLTL 248
Cdd:MTH00207 267 MKKIIALSTLSQLGVMMASLGLGmPKLALFHLITHALFKALLFVcagsLIHShHHSQDLRTMGNLTNQMPLTTSCLLIAN 346
|
250 260 270
....*....|....*....|....*....|....
gi 84488634 249 MSLAGLPPLTGFMPKWLIIQELTKQHMLIIATSM 282
Cdd:MTH00207 347 LALCGSPFLSGFYSKDLILESSLFYPHNSLMILM 380
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
139-268 |
2.16e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 39.93 E-value: 2.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 139 LSLLMMTVQSTNTPLMLTLGLMSAIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSTKLMLL--TFYT--YIIMTST 214
Cdd:PRK07691 263 FTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIgaIYYLihDMIVKAA 342
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 84488634 215 TFL----MIKLLETNKISTVMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFMPKWLIIQ 268
Cdd:PRK07691 343 LFLligiMIKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVE 400
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
152-268 |
2.42e-03 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 39.55 E-value: 2.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 152 PLMLTLGLMSAIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSTKLML--LTFYTYIIMTSTTFL------MIKLLE 223
Cdd:PRK12663 273 PLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGIngAIFYLVHDMVVKTALfliagsLVRLTG 352
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 84488634 224 TNKISTVMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFMPKWLIIQ 268
Cdd:PRK12663 353 YRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQ 397
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
101-255 |
2.88e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 39.26 E-value: 2.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 101 ALAIKLGLAPFHFWLPEV-LQGTTTTTALILTTWQKLAPLSL------LMMTVQSTNTPLMLTLGLMSAIIGGWNGLNQT 173
Cdd:MTH00217 215 SLAIKIPKIPFHIWLPQAhVEAPVAGSVILAGVLLKLGGYGFirfswpLLPEASEYFSPLIQTLSLLAIIYGSLTTCRQV 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 174 QLRKIMAFSSIAHLGwMITILTLSTKLMLLTFYTYIIM-----TSTTFLMIKLL----ETNKISTVMTSWTKLPTLNTMM 244
Cdd:MTH00217 295 DLKRIIAYSSVAHMG-LVTLGIFSHTIQGLVAAIFLMLahglvSSALFIAVTFLyerhHTRLIKYYRGMVITMPLFGILM 373
|
170
....*....|.
gi 84488634 245 MLTLMSLAGLP 255
Cdd:MTH00217 374 LLLVLANASIP 384
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
2-270 |
2.92e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 39.39 E-value: 2.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 2 SPYANTIITMSLIMgplltISSNH--WILAWTGLEISTLAIIPLIAKQHHPRAIeaaikyFLTQATASTLILFSSIINAW 79
Cdd:PRK06459 76 SLYILTILGMAIVL-----TSDNYllFLAGWEIMTIPSYVAIALTKKNKRPAFV------FMAFGELSTVLILAGFAWAF 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 80 TL-GQWSIMQMSNNISCTILTAALAIKLGLAPFHF--WLPEVLQGTTTTTALILTTWQKLAPL-SLLMMTVQSTNTP--- 152
Cdd:PRK06459 145 IIsGTTNFSYLPSPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVyGILKMTILTQTIPigy 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 153 ---LMLTLGLMSAIIGGWNGLNQTQLRKIMAFSSIAHLGWMITIL----------TLSTKLMLLTFYTYIIMTSTT---- 215
Cdd:PRK06459 225 fglTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALglymvtkqliTSIEHFSLITVILYSFAHSVAktgl 304
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 84488634 216 FLMIKLLETNKISTVMTSWTKLPTLNTMMMLtlMSLAGLPPLTGFMPKWLIIQEL 270
Cdd:PRK06459 305 FLSSGLQEKQSITYSKKIRNRWIELGLTLLA--SSLSGLLPNIGGVASWLLLESL 357
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
137-279 |
5.20e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 38.84 E-value: 5.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 137 APLSLLMMTVqstntplmltLGLMSAIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLST------KLMLLTFYTYII 210
Cdd:MTH00210 271 SPLALTIVTI----------LGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNystslfHLMNHAFFKALL 340
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 84488634 211 MTSTTFLMIKLLETNKISTVMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIA 279
Cdd:MTH00210 341 FLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFA 409
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
28-188 |
6.20e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 38.47 E-value: 6.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 28 LAWtglEISTLAIIPLIAKQHHPRAIEAAIKYFLTQATASTLILFSSIINA-----WTLGQWSIMQMSNNISCTILT--- 99
Cdd:PRK12561 114 LMW---ELELVPVYLLISIWGGQKRLYAATKFILYTALASIFILVAGLALAlsgdtFTFDLAELGAKSYPLALELLLyag 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 100 --AALAIKLGLAPFHFWLPE-----------VLQGTTTttalilttwqKLAPLSLLMMTVQS------TNTPLMLTLGLM 160
Cdd:PRK12561 191 flIAFGVKLPIFPLHTWLPDahgeasapvsmILAGVLL----------KMGGYALIRFNVQMlpdahvYFAPALAILGVV 260
|
170 180
....*....|....*....|....*...
gi 84488634 161 SAIIGGWNGLNQTQLRKIMAFSSIAHLG 188
Cdd:PRK12561 261 NIIYGALNAFAQDNVKRRLAYSSVSHMG 288
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
33-267 |
6.69e-03 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 38.21 E-value: 6.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 33 LEISTLAIIPLIAKQHHPRAIEAAIKYFLTQATASTLILFSSII---NAWTLGQWSIMQMSNNISCTILTAALA-IKLGL 108
Cdd:PRK08377 137 MEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALiygATGTLNMAHIAQLAGTIDPTVAQVGLAlLIFGL 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 109 A------PFHFWLPEVLQGTTTTTALILTTW---QKLAPLSLLMMTVQSTN-----TPLMLTLGLMSAIIGGWNGLNQTQ 174
Cdd:PRK08377 217 AveaelfPLNAWAPDAYQAAPHPITVMFSAFvvkAGLYAMARILYLMQNANgwssvLKLVIIMATLTVFFAELSALRQKN 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 175 LRKIMAFSSIAHLGWMITILTLSTKL--------MLLTFYTYIIMTSTTFLMIKLLETNKISTVMTSWTKLPTLNTMMML 246
Cdd:PRK08377 297 VKRMIAYSSIGQVGMIALALALGTQAgvdagvfhMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTI 376
|
250 260
....*....|....*....|.
gi 84488634 247 TLMSLAGLPPLTGFMPKWLII 267
Cdd:PRK08377 377 GALSTVGIPLFNVFWSKFRII 397
|
|
| ND2 |
MTH00091 |
NADH dehydrogenase subunit 2; Provisional |
102-278 |
6.85e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177154 Cd Length: 273 Bit Score: 37.54 E-value: 6.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 102 LAIKLGLAPFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLMMTVqSTNTPLMLTLGLMSAIIGGWNGLNqtqLRKIMAF 181
Cdd:MTH00091 67 LMMKIGVAPFHFWIFSVTNGLFGWNLMWFLTFQKLPFLLVLLQFF-SKNFFFLLLFGLLICFFQMFLLKS---YKNLLIL 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488634 182 SSIAHLGWMITILTLS-TKLMLLTFYTYIIMtsttFLMIklletnkistvmTSWTKLPTLNTMMMLTLMSLAGLPPLTGF 260
Cdd:MTH00091 143 SSTESFNWLILSFFFSfFNVFFLFFYYFLLM----LFLI------------PKFNNVNKLNFVSWETLLVFMNLPFSVTF 206
|
170
....*....|....*...
gi 84488634 261 MPKWLIIQELTKQHMLII 278
Cdd:MTH00091 207 FVKIFSLSEILKVLGFFL 224
|
|
| |
