|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 736.62 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 1 MLKIIIPTILLLPTTMLCKPKQLWPTTLTSSLGIALLSLQWLKPSSELTTFSNYYLGVDPISAPLLTLSCWLTPLMILAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 81 QNHLTTEPTPRKRTFITTIIMLQISLILAFSAMELIMFFIAFEATLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 161 LVALSFMQTQNGTLSIYMMQLNQPTLTNSWSHSMWWLALLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 241 YGIIRITMTLDPLSKTLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSYTGAITLMIAHG 320
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 321 MTSSMLFCLANTNYERTHSRVLLLTQNMQLSLPLMGLWWLLASLTNMALPPTINLMGELTIIVSLFNWSNITILMTGLGT 400
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 84488629 401 LITATYTLYMLTTTQWGETPSHTKSIPPTHTREHLLMALHILPMALLMTKPELIWGT 457
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 656.60 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 1 MLKIIIPTILLLPTTMLCKPKQLWPTTLTSSLGIALLSLQWLKPSSELTTFSNYYLGVDPISAPLLTLSCWLTPLMILAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 81 QNHLTTEPTPRKRTFITTIIMLQISLILAFSAMELIMFFIAFEATLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 161 LVALSFMQTQNGTLSIYMMQLNQPTLTNSWSHSMWWLALLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 241 YGIIRITMTLDPLSKTLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSYTGAITLMIAHG 320
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 321 MTSSMLFCLANTNYERTHSRVLLLTQNMQLSLPLMGLWWLLASLTNMALPPTINLMGELTIIVSLFNWSNITILMTGLGT 400
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 84488629 401 LITATYTLYMLTTTQWGETPSHTKSIPPTHTREHLLMALHILPMALLMTKPELIWGTF 458
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISGMF 458
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 618.83 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 1 MLKIIIPTILLLPTTMLCKPKQLWPTTLTSSLGIALLSLQWLKPSSELTTFSNYYLGVDPISAPLLTLSCWLTPLMILAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 81 QNHLTTEPTPRKRTFITTIIMLQISLILAFSAMELIMFFIAFEATLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 161 LVALSFMQTQNGTLSIYMMQLNQPTLTNSWSHSMWWLALLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 241 YGIIRITMTLDPLSKTLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSYTGAITLMIAHG 320
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 321 MTSSMLFCLANTNYERTHSRVLLLTQNMQLSLPLMGLWWLLASLTNMALPPTINLMGELTIIVSLFNWSNITILMTGLGT 400
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 84488629 401 LITATYTLYMLTTTQWGETPSHTKSIPPTHTREHLLMALHILPMALLMTKPELIWGTFY 459
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 549.56 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 1 MLKIIIPTILLLPTTMLCKPKQLWPTTLTSSLGIALLSLQWLKPSSELT-TFSNYYLGVDPISAPLLTLSCWLTPLMILA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGwSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 80 SQNHLTTEPTPRKRTFITTIIMLQISLILAFSAMELIMFFIAFEATLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 160 LLVALSFMQTQNGTLSIYMMQLNQPTLTNSWSHSMWWLALLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 240 GYGIIRITMTLDPLSKTLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSYTGAITLMIAH 319
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 320 GMTSSMLFCLANTNYERTHSRVLLLTQNMQLSLPLMGLWWLLASLTNMALPPTINLMGELTIIVSLFNWSNITILMTGLG 399
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 84488629 400 TLITATYTLYMLTTTQWGETPSHTKSIPPTHTREHLLMALHILPMALLMTKPELIWG 456
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWG 457
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-454 |
2.09e-175 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 499.08 E-value: 2.09e-175
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 3 KIIIPTILLLPTTMLCKPKQLWPTTLTSSLGIALLSLQWLKPSSELT-TFSNYYLGVDPISAPLLTLSCWLTPLMILASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGwSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 82 NHLTTEPTPRKRTFITTIIMLQISLILAFSAMELIMFFIAFEATLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 162 VALSFMQTQNGTLSIYMMQLNQPTltnSWSHSMWWLALLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGY 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSKLT---TWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 242 GIIRITMTLDPLSKTLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSYTGAITLMIAHGM 321
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 322 TSSMLFCLANTNYERTHSRVLLLTQNMQLSLPLMGLWWLLASLTNMALPPTINLMGELTIIVSLFNWSNITILMTGLGTL 401
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 84488629 402 ITATYTLYMLTTTQWGETPSHTKSIPPTHTREHLLMALHILPMALLMTKPELI 454
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-454 |
7.21e-156 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 449.81 E-value: 7.21e-156
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 1 MLKIIIPTILLLPTTMLCKPKQLWPTTLTSSLGIALLSLQWLKPS-SELTTFSNYYLGVDPISAPLLTLSCWLTPLMILA 79
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHwSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 80 SQNHLTTEPTPRKRTFITTIIMLQISLILAFSAMELIMFFIAFEATLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLP 159
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 160 LLVALSFMQTQNGTLSIYMMQLNQPTLTNSWSHSMWWLALLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 240 GYGIIRITMTLD-PLSKTLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSYTGAITLMIA 318
Cdd:MTH00044 241 GYGLIRLINLFSlPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 319 HGMTSSMLFCLANTNYERTHSRVLLLTQNMQLSLPLMGLWWLLASLTNMALPPTINLMGELTIIVSLFNWSNITILMTGL 398
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 84488629 399 GTLITATYTLYMLTTTQWGETPSHTKSIPPTHTREHLLMALHILPMALLMTKPELI 454
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNII 456
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-454 |
1.01e-126 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 374.88 E-value: 1.01e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 1 MLKIIIPTILLLPTTMLCKPKQLwpttLTSSLGIALLSLQWLKPSSELTTFSNYYLGVDPISAPLLTLSCWLTPLMILAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWL----VQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 81 QNHLTTEPTPRKrtFITTIIMLQISLILAFSAMELIMFFIAFEATLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPL 160
Cdd:MTH00163 77 ESVYKKNNYSNL--FLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 161 LVALSFMQTQNGTLSIYMMQLNqptltnSWSHSMWWLALLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLLNFF------GSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 241 YGIIRITMTLDPLSKTLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSYTGAITLMIAHG 320
Cdd:MTH00163 229 YGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 321 MTSSMLFCLANTNYERTHSRVLLLTQNMQLSLPLMGLWWLLASLTNMALPPTINLMGELTIIVSLFNWSNITILMTGLGT 400
Cdd:MTH00163 309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 84488629 401 LITATYTLYMLTTTQWGETPSHTKSIPPTHTREHLLMALHILPMALLMTKPELI 454
Cdd:MTH00163 389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLF 442
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
52-454 |
3.90e-118 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 351.83 E-value: 3.90e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 52 SNYYLGVDPISAPLLTLSCWLTPLMILASQNHLTTEPTPRKrtFITTIIMLQISLILAFSAMELIMFFIAFEATLIPTLV 131
Cdd:MTH00150 16 LSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSS--FSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLL 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 132 IITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSFMQTQNGTLSIYMMQLnqptLTNSWSHSM-WWLALLTAFMIKMPLY 210
Cdd:MTH00150 94 LILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISS----LRKLLSSMGlWGLLVFLAFLVKLPMY 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 211 GLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSKTLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSS 290
Cdd:MTH00150 170 PFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSS 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 291 VSHMGLVIAATLTQTQWSYTGAITLMIAHGMTSSMLFCLANTNYERTHSRVLLLTQNMQLSLPLMGLWWLLASLTNMALP 370
Cdd:MTH00150 250 VGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAP 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 371 PTINLMGELTIIVSLFNWSNITILMTGLGTLITATYTLYMLTTTQWGETPSHTKSIPPTHTREHLLMALHILPMALLMTK 450
Cdd:MTH00150 330 PSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILK 409
|
....
gi 84488629 451 PELI 454
Cdd:MTH00150 410 SDLL 413
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-454 |
1.11e-117 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 352.12 E-value: 1.11e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 1 MLKIIIPTILLLPTTMLcKPKQLWPTTLTSSLGIALLSLQWLKPSSELTTFSNYYLGVDPISAPLLTLSCWLTPLMILAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLI-KYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 81 QNHLTTEPTPRkrTFITTIIMLQISLILAFSAMELIMFFIAFEATLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPL 160
Cdd:MTH00014 80 FKIFQNNKAPK--TFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 161 LVALSFMQTQNGTLSIYMMQLNQPTLtnsWSHSMWWLALLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
Cdd:MTH00014 158 LMSILLIFYTNNSLSMLMSSMEPPSI---YLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 241 YGIIRITMTLDPLSKTLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSYTGAITLMIAHG 320
Cdd:MTH00014 235 YGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 321 MTSSMLFCLANTNYERTHSRVLLLTQNMQLSLPLMGLWWLLASLTNMALPPTINLMGELTIIVSLFNWSNITILMTGLGT 400
Cdd:MTH00014 315 LCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITS 394
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 84488629 401 LITATYTLYMLTTTQWGETPSHTKSIPPTHTREHLLMALHILPMALLMTKPELI 454
Cdd:MTH00014 395 FLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLI 448
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
5-454 |
9.21e-112 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 336.95 E-value: 9.21e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 5 IIPTILLLPTTMLCKPKQLWPTTLTSSLGIALLSLQWLKPSSELTTFSNYYLGVDPISAPLLTLSCWLTPLMILASQNhl 84
Cdd:MTH00205 2 SIFGVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYK-- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 85 TTEPTPRKRTFITTIIMLQISLILAFSAMELIMFFIAFEATLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPLLVAL 164
Cdd:MTH00205 80 VFKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 165 SFMQTQNGTLSiymMQLNQPTLTNSWSHSMWWLALLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGII 244
Cdd:MTH00205 160 FFLNSLNFSLS---MFFNFPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLI 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 245 RITMTLDPLSKTLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSYTGAITLMIAHGMTSS 324
Cdd:MTH00205 237 RITSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSS 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 325 MLFCLANTNYERTHSRVLLLTQNMQLSLPLMGLWWLLASLTNMALPPTINLMGELTIIVSLFNWSNITILMTGLGTLITA 404
Cdd:MTH00205 317 GMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSG 396
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 84488629 405 TYTLYMLTTTQWGETPSHTKSIPPTHTREHLLMALHILPMALLMTKPELI 454
Cdd:MTH00205 397 AYSLYLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIF 446
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
53-447 |
2.66e-86 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 272.34 E-value: 2.66e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 53 NYYLGVDPISAPLLTLSCWLTPLMILASQNhlttEPTPRKRTFITTIIMLQISLILAFSAMELIMFFIAFEATLIPTLVI 132
Cdd:COG1008 75 SYHLGVDGISLPLVLLTALLTPLAILASWN----EIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 133 ITRWGNQmERLNAGTYFLFYTLIGSLPLLVALSFMQTQNGTLSIYMMQLNQPTLTNSWShSMWWLALLTAFMIKMPLYGL 212
Cdd:COG1008 151 IGIWGGE-RRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAELAAAPLPLTAQ-LLLFLAFFIAFAVKVPMFPF 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 213 HLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPL-SKTLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSV 291
Cdd:COG1008 229 HTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSV 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 292 SHMGLVIAATLTQTQWSYTGAITLMIAHGMTSSMLFCLANTNYERTHSRVLLLTQNMQLSLPLMGLWWLLASLTNMALPP 371
Cdd:COG1008 309 SHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPG 388
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 84488629 372 TINLMGELTIIVSLFNWSNITILMTGLGTLITATYTLYMLTTTQWGETPSHTKSIPPTHTREHLLMALHILPMALL 447
Cdd:COG1008 389 TSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVLAPLAALILLL 464
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
53-442 |
1.20e-75 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 245.11 E-value: 1.20e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 53 NYYLGVDPISAPLLTLSCWLTPLMILASQNhlttEPTPRKRTFITTIIMLQISLILAFSAMELIMFFIAFEATLIPTLVI 132
Cdd:PRK05846 75 SYHLGVDGISLLLVVLTALLTPLAVLASWE----EIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 133 ITRWGNQmERLNAGTYFLFYTLIGSLPLLVALSFM----QTQNGTLSI-YMMQLNQPTLTNSWshsmWWLALLTAFMIKM 207
Cdd:PRK05846 151 IGVWGGK-NRIYAATKFFLYTLLGSLLMLVAIIYLvvvyYNATGTFDIaDLLNLPLPPGVQYW----LFLAFFIAFAVKM 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 208 PLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPL-SKTLSYPFMVMALWGVIMTSSICLRQTDLKSLI 286
Cdd:PRK05846 226 PMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLI 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 287 AYSSVSHMGLVIAATLTQTQWSYTGAITLMIAHGMTSSMLFCLANTNYERTHSRVLLLTQNMQLSLPLMGLWWLLASLTN 366
Cdd:PRK05846 306 AYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMAS 385
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 84488629 367 MALPPTINLMGELTIIVSLFNWSNITILMTGLGTLITATYTLYMLTTTQWGETPSHTKSIPPTHTREHLLMALHIL 442
Cdd:PRK05846 386 LGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLILLPLVA 461
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
112-400 |
6.09e-74 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 234.13 E-value: 6.09e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 112 AMELIMFFIAFEATLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSFMQTQNGTLSIYMMQLNQPTLTNSWS 191
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 192 HSMWWLALLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSKTLSYPFMVMALWGVIM 271
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 272 TSSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSYTGAITLMIAHGMTSSMLFCLA-NTNYERTHSRVLLLTQNMQL 350
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 84488629 351 SLPLMGLWWLLASLTNMALPPTINLMGELTIIVSLFNWSNITILMTGLGT 400
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
53-459 |
8.84e-72 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 234.45 E-value: 8.84e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 53 NYYLGVDPISAPLLTLSCWLTPLMILASQNhlttEPTPRKRTFITTIIMLQISLILAFSAMELIMFFIAFEATLIPTLVI 132
Cdd:TIGR01972 70 SYHLGVDGISLLLVLLTALLTLLAILASWE----SIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 133 ITRWGNQmERLNAGTYFLFYTLIGSLPLLVALSFMQTQNGTLSIYMMQLNQPTltNSWSHSMWWLALLTAFMIKMPLYGL 212
Cdd:TIGR01972 146 IGVWGGP-NRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTFDLLELLNLPL--PFGVQTWLFLAFFIAFAVKVPLFPL 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 213 HLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDP-LSKTLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSV 291
Cdd:TIGR01972 223 HTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSI 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 292 SHMGLVIAATLTQTQWSYTGAITLMIAHGMTSSMLFCLANTNYERTHSRVLLLTQNMQLSLPLMGLWWLLASLTNMALPP 371
Cdd:TIGR01972 303 SHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPG 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 372 TINLMGELTIIVSLFNWSNITILMTGLGTLITATYTLYMLTTTQWGE-TPSHTKSIPPTHTREHLLMALHILPMALLMTK 450
Cdd:TIGR01972 383 TSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGElSNPEVAEFPDLNGREIAVLAPLVVLILFLGLY 462
|
....*....
gi 84488629 451 PELIWGTFY 459
Cdd:TIGR01972 463 PNPLLDLTE 471
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
51-404 |
9.11e-67 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 221.46 E-value: 9.11e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 51 FSNYYLGVDPISAPLLTLSCWLTPLMILASQNHLTTeptpRKRTFITTIIMLQISLILAFSAMELIMFFIAFEATLIPTL 130
Cdd:MTH00217 71 FGPVVFAVDGISIFFLILTALLTPICILISWNSIKF----LIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMF 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 131 VIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSFMQTQNGTLSiYMMQLNQpTLTNSWSHSMWwLALLTAFMIKMPLY 210
Cdd:MTH00217 147 LIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTD-YQALCCL-KIEKELQYFIF-LGFFLSLAIKIPKI 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 211 GLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSKTLSYPF-MVMALWGVIMTSSICLRQTDLKSLIAYS 289
Cdd:MTH00217 224 PFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLiQTLSLLAIIYGSLTTCRQVDLKRIIAYS 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 290 SVSHMGLVIAATLTQTQWSYTGAITLMIAHGMTSSMLFCLANTNYERTHSRVLLLTQNMQLSLPLMGLWWLLASLTNMAL 369
Cdd:MTH00217 304 SVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASI 383
|
330 340 350
....*....|....*....|....*....|....*
gi 84488629 370 PPTINLMGELTIIVSLFNWSNITILMTGLGTLITA 404
Cdd:MTH00217 384 PLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSA 418
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
40-404 |
1.28e-66 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 221.09 E-value: 1.28e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 40 QWLKPSSELTTFSNYYLGVDPISAPLLTLSCWLTPLMILASQNHLTTeptpRKRTFITTIIMLQISLILAFSAMELIMFF 119
Cdd:MTH00204 63 EWIISPTLNFQWGPLVFAVDGVSLFFILLTTLLIPICILISWKSIKF----LFKEFLLCLLFLEVLLIGVFSVLDLLLFY 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 120 IAFEATLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSFMQTQNGTLSiYMMQLNQ--PTLTNSWSHSMWWL 197
Cdd:MTH00204 139 ILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTD-YQILLNIklPLSIQKWLLVGFFL 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 198 ALltafMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSKTLSYPFMVM-ALWGVIMTSSIC 276
Cdd:MTH00204 218 SL----AVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVMlSVIAVIYGSLTT 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 277 LRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSYTGAITLMIAHGMTSSMLFCLANTNYERTHSRVLLLTQNMQLSLPLMG 356
Cdd:MTH00204 294 CRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFV 373
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 84488629 357 LWWLLASLTNMALPPTINLMGELTIIVSLFNWSNITILMTGLGTLITA 404
Cdd:MTH00204 374 IIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSA 421
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
56-404 |
7.89e-63 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 211.70 E-value: 7.89e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 56 LGVDPISAPLLTLSCWLTPLMILASQNHLTTeptpRKRTFITTIIMLQISLILAFSAMELIMFFIAFEATLIPTLVIITR 135
Cdd:MTH00226 98 FAVDGISIYFIILTGFIVPCSILISWHSVKY----LTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGI 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 136 WGNQMERLNAGTYFLFYTLIGSLPLLVALSFMQTQNGTLSiYMMQLNQPTLTNSWSHSMWWLALLTAFMIKMPLYGLHLW 215
Cdd:MTH00226 174 WGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTD-YLTLASCSHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIW 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 216 LPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPL-SKTLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHM 294
Cdd:MTH00226 253 LPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHM 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 295 GLVIAATLTQTQWSYTGAITLMIAHGMTSSMLFCLANTNYERTHSRVLLLTQNMQLSLPLMGLWWLLASLTNMALPPTIN 374
Cdd:MTH00226 333 GLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGN 412
|
330 340 350
....*....|....*....|....*....|
gi 84488629 375 LMGELTIIVSLFNWSNITILMTGLGTLITA 404
Cdd:MTH00226 413 FIGEYLSILSSFNWNPIIGVFVCSGVILSA 442
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
53-403 |
2.49e-50 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 178.30 E-value: 2.49e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 53 NYYLGVDPISAPLLTLSCWLTPLMILASQNhLTTEPtprkRTFITTIIMLQISLILAFSAMELIMFFIAFEATLIPTLVI 132
Cdd:PRK12561 52 EWSLGVDGLSMPLVLLSGLITTLSIFASWK-VTRKP----RLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLL 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 133 ITRWGNQmERLNAGTYFLFYTLIGSLPLLVALSFMQTQNGTLSIYMMQLNQPTLTNSWShSMWWLALLTAFMIKMPLYGL 212
Cdd:PRK12561 127 ISIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAKSYPLALE-LLLYAGFLIAFGVKLPIFPL 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 213 HLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSKTLSYPfmVMALWGV--IMTSSIC-LRQTDLKSLIAYS 289
Cdd:PRK12561 205 HTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAP--ALAILGVvnIIYGALNaFAQDNVKRRLAYS 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 290 SVSHMGLVIAATLTQTQWSYTGAITLMIAHGMTSSMLFCLANTNYERTHSRVLLLTQNMQLSLPLMGLWWLLASLTNMAL 369
Cdd:PRK12561 283 SVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLAL 362
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 84488629 370 PPTINLMGELTIIVSLFN-------WSNITILMTGLGTLIT 403
Cdd:PRK12561 363 PGMSGFVSELTVFLGITSsdvysstFRTITILLAAVGLILT 403
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
101-395 |
3.76e-50 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 175.48 E-value: 3.76e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 101 MLQISLILAFSAMELIMFFIAFEATLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSfmqtqngtLSIYMMQ 180
Cdd:MTH00094 70 LLILICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYL--------KNFFFFS 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 181 LNQPTLTNSWshsMWWLALLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRItmtLDPLSKTLSYP 260
Cdd:MTH00094 142 LCYFDFFLSW---EMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRI---LGSLNFVYNNF 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 261 FMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSYTGAITLMIAHGMTSSMLFCLANTNYERTHSR 340
Cdd:MTH00094 216 WIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSR 295
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 84488629 341 VLLLTQNMQLSLPLMGLWWLLASLTNMALPPTINLMGELTIIVSLFNWSNITILM 395
Cdd:MTH00094 296 LIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFF 350
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
56-402 |
1.46e-47 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 169.17 E-value: 1.46e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 56 LGVDPISAPLLTLSCWLTPLMILASQNHLTTEPtpRKRTFITTIIMLQISLILAFSAMELIMFFIAFEATLIPTLVIITR 135
Cdd:COG0651 72 LVADRLSALFLLLTALVALAVLLYSIGYMRHER--RGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVAL 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 136 WGNQmERLNAGTYFLFYTLIGSLPLLVALSFMQTQNGTLSIYMMQLNQPTLTNSWSHSMWWLaLLTAFMIKMPLYGLHLW 215
Cdd:COG0651 150 GGTK-EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLLAAFAL-LLVGFGIKAALFPLHFW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 216 LPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDP--LSKTLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSH 293
Cdd:COG0651 228 LPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQ 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 294 MGLVIAATLTQTQWSYTGAITLMIAHGMTSSMLFCLANTNYERTHSRVLLLTQNMQLSLPLMGLWWLLASLTNMALPPTI 373
Cdd:COG0651 308 IGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLS 387
|
330 340 350
....*....|....*....|....*....|...
gi 84488629 374 NLMGELTIIVSLFN----WSNITILMTGLGTLI 402
Cdd:COG0651 388 GFVSKWLLLQAALEagawLLAAVLLLSSLLTLA 420
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
53-435 |
2.90e-46 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 167.18 E-value: 2.90e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 53 NYYLGVDPISAPLLTLSCWLTPLMILASQnhlttEPTPRKRTFITTIIMLQISLILAFSAMELIMFFIAFEATLIPTLVI 132
Cdd:PRK06473 72 SYHLGVDGLSLPLLVLNSLLTLIAIYSSD-----ESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 133 ITRWGNQmERLNAGTYFLFYTLIGSLPLLVALSFMQTQNGTLSIYMMQLNQPTLTNSwSHSMWWLALLTAFMIKMPLYGL 212
Cdd:PRK06473 147 IAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLS-TQLLLLAPILVGFGIKIPLVPF 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 213 HLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSKTLSYPFM-VMALWGVIMTSSICLRQTDLKSLIAYSSV 291
Cdd:PRK06473 225 HTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLaTWAVVSVLYGASCAIAQKDMKKMVAYSSI 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 292 SHMGLVIAATLTQTQWSYTGAITLMIAHGMTSSMLFCLANTNYERTHSR---VLLLTQNMQLSLPLMGLWWLLASLTNMA 368
Cdd:PRK06473 305 GHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRdvdVLRGLLNPERGLPITGSLMILGVMASAG 384
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 84488629 369 LPPTINLMGELTIIVSLFNWSNITILMTGLGTLITATYTLYMLTTTQWGETPSHTKSIPPTHTREHL 435
Cdd:PRK06473 385 IPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNLPRVLWSERL 451
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
53-383 |
3.96e-39 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 148.32 E-value: 3.96e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 53 NYYLGVDPISAPLLTLSCWLTPLMILASQnhlttEPTPRKRTFITTIIMLQISLILAFSAMELIMFFIAFEATLIPTLVI 132
Cdd:PRK02546 80 TWSVGADGLSMPLILLTGFITTLAVLAAW-----PVTFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLL 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 133 ITRWGNQmERLNAGTYFLFYTLIGSLPLLVALSFMQTQNGTLSIYMMQLNQPTLTNSWsHSMWWLALLTAFMIKMPLYGL 212
Cdd:PRK02546 155 LAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGF-QLLCYAGLLIAYGVKLPIVPL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 213 HLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSKTLSYPFM-VMALWGVIMTSSICLRQTDLKSLIAYSSV 291
Cdd:PRK02546 233 HTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLiVLGVVNIIYAALTSFAQRNLKRKIAYSSI 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 292 SHMGLVIAATLTQTQWSYTGAITLMIAHGMTSSMLFCLANTNYERTHSRVLLLTQNMQLSLPLMGLWWLLASLTNMALPP 371
Cdd:PRK02546 313 SHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPG 392
|
330
....*....|..
gi 84488629 372 TINLMGELTIIV 383
Cdd:PRK02546 393 MSGFVAELMVFV 404
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
56-370 |
3.61e-38 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 145.09 E-value: 3.61e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 56 LGVDPISAPLLTLSCWLTPLMILASQnhlttePTPRK-RTFITTIIMLQISLILAFSAMELIMFFIAFEATLIPTLVIIT 134
Cdd:CHL00011 80 LGIDGLSIGPILLTGFITTLATLAAW------PVTRNsRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLS 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 135 RWGNQmERLNAGTYFLFYTLIGSLPLLVALSfmqtqngTLSIYM---MQLNQPTLTNSwSHSM-----WWLALLTAFMIK 206
Cdd:CHL00011 154 MWGGK-KRLYSATKFILYTAGGSIFLLIGVL-------GMGLYGsnePTLNFETLANQ-SYPValeilFYIGFLIAYAVK 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 207 MPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSKTLSYPF-MVMALWGVIMTSSICLRQTDLKSL 285
Cdd:CHL00011 225 LPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWlVIVGAIQIIYAASTSLGQRNLKKR 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 286 IAYSSVSHMGLVIAATLTQTQWSYTGAITLMIAHGMTSSMLFCLANTNYERThsRVLLLTQ--NMQLSLPLMGLWWLLAS 363
Cdd:CHL00011 305 IAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYLDEmgGIAIPMPKIFTMFSSFS 382
|
....*..
gi 84488629 364 LTNMALP 370
Cdd:CHL00011 383 MASLALP 389
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
53-329 |
2.28e-34 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 134.45 E-value: 2.28e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 53 NYYLGVDPISAPLLTLSCWLTPLMILASqnhltTEPTPRKRTFITTIIMLQISLILAFSAMELIMFFIAFEATLIPTLVI 132
Cdd:PRK07363 72 SYSLGVDGLSLPLLVLNSLLTWIAIYSI-----GENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 133 ITRWGNQmERLNAGTYFLFYTLIGSLPLLVALSFMQTQNGTLSIYMMQLNQPTLTNSwSHSMWWLALLTAFMIKMPLYGL 212
Cdd:PRK07363 147 IAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLN-TQLILLTGLLLGFGIKIPLVPL 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 213 HLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSKTLSYPfmVMALWG---VIMTSSICLRQTDLKSLIAYS 289
Cdd:PRK07363 225 HTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGtisVIYGALSAIAQKDIKRMVAYS 302
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 84488629 290 SVSHMGLVIAATLTQTQWSYTGAITLMIAHGMTSSMLFCL 329
Cdd:PRK07363 303 SIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHL 342
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-109 |
4.11e-27 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 104.53 E-value: 4.11e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 1 MLKIIIPTILLLPTTMLCKPKQLWPTTLTSSLGIALLSLQWLK-PSSELTTFSNYYLGVDPISAPLLTLSCWLTPLMILA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNnPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 84488629 80 SQNHLTTEPTPRKRTFITTIIMLQISLILA 109
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
56-447 |
1.27e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 106.12 E-value: 1.27e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 56 LGVDPISAPLLTLSCWLTPLMILASQnhltTEPTPRKRTFITTIIMLQISLILAFSAMELIMFFIAFEATLIPTLVIITR 135
Cdd:PRK08375 73 LRADSLSALFLLVTSILAIAALLYAI----GYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAM 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 136 WGNQmERLNAGTYFLFYTLIGSLPLLVALSFMQTQNGTLSIYMMQLNQPTLTnswshsmwwlALLTAF-------MIKMP 208
Cdd:PRK08375 149 GGDR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALAENP----------TVVTAFgfvllalALKAA 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 209 LYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTL----DPLSKTLSYPFMVMALWGVIMTSSICLRQTDLKS 284
Cdd:PRK08375 218 VFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVfggdFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKR 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 285 LIAYSSVSHMGLVIAATLTQTQWSYTGAITLMIAHGMTSSMLFCLANTNYERTHSRVLLLTQNMQLSLPLMGLWWLLASL 364
Cdd:PRK08375 298 VLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASL 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 365 TNMALPPTINLMGELTIIVSLF---NWSNITILMtgLGTLITATYTLYMLTTTQWGETPSHTksiPPTHTREHLLMALHI 441
Cdd:PRK08375 378 SLIGVPPTSGFVSKWYLVVGAVeagQWLVLAVLL--ASSLLALLYFLRIWYRAFFGPPPPGS---EAPKQEAPLGMLAPS 452
|
....*.
gi 84488629 442 LPMALL 447
Cdd:PRK08375 453 LALALL 458
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-447 |
9.71e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 103.90 E-value: 9.71e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 58 VDPISAPLLTLSCWLTPLMILASQNHLTTEPTPRkrTFITTIIMLQISLILAFSAMELIMFFIAFEATLIPTLVIITRWG 137
Cdd:PRK12667 80 VDLLGALLGLLTALVMFLILIYSYWYLEHESGPE--WYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 138 NQMERLNAGTYFLFYTLIGSLPLLVALSFMQTQNGTL----------SIYMMQLNQPTLTNSWSHSMWWLALLTAFMIKM 207
Cdd:PRK12667 158 DRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLnmadlsakirGLSFPLTGGLAGNPPLALGVALALALWAFTIKA 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 208 PLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMT-------LDPLSKTLSYPFMVMALWGVIMTSSICLRQT 280
Cdd:PRK12667 238 AIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTifgispsLIDFRAALSPILIILGAVSAIIGALMMVVQK 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 281 DLKSLIAYSSVSHMGLVIAATLTQTQWSYTGAITLMIAHGMTSSMLFCLANTNYERTHSRVLLLTQNMQLSLPLMGLWWL 360
Cdd:PRK12667 318 DVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFL 397
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 361 LASLTNMALPPTINLMGELTIIVSLFNWSN-ITILMTGLGTLITATYTLYMLTTTQWGETPSHTKSIppthTREHLLMAL 439
Cdd:PRK12667 398 IGALSLVGIPPLNGFFSKLLLFNALLESGFyLPALVLLIASAISLVGYFRAWYSLFFGKPKSGEEVE----HKESPSMSV 473
|
....*...
gi 84488629 440 HILPMALL 447
Cdd:PRK12667 474 VILVLALA 481
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
100-394 |
1.42e-17 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 84.59 E-value: 1.42e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 100 IMLQISL---ILAFSAMELIMFFIAFEATLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSFMQTQNGTLSi 176
Cdd:MTH00062 75 FFLFLSLifsILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFN- 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 177 ymmqLNQPTLTNSWSHSMWWLaLLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSkT 256
Cdd:MTH00062 154 ----FSDWGSDDSVSLIVYYV-LSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGS-F 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 257 LSYPFMVMALWGVIMTSSicLRQTDLKSLIAYSSVSHMgLVIAATLTQTQWSYTGAITLM-IAHGMTSSMLFCLANTNYE 335
Cdd:MTH00062 228 LGYLFLCCLFSVFFLITA--CSELDGKRWLAFLSLSHI-LVPVLGLFVGDWSSINLSFFYcLGHGLSAGLVFLLLWCFYE 304
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 84488629 336 RTHSRVLLLTQNMQLSLPLMGLWWLLASLTNMALPPTINLMGELTIIVSLFNWSNITIL 394
Cdd:MTH00062 305 VSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYLLF 363
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
199-448 |
2.24e-17 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 84.21 E-value: 2.24e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 199 LLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLD--PLSKTLSYPFMVMALWGVIMTSSIC 276
Cdd:PRK06458 220 LLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDaaIGSDFPGRLLLIFGLLSVLVAAFFL 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 277 LRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSYTGAITLMIAHGMTSSMLFCLANTNYERTHSRVLLLTQNMQLSLPLMG 356
Cdd:PRK06458 300 LRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTG 379
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 357 LWWLLASLTNMALPPTINLMGELTIIVSLFN---WSNITILMTGLGTLITATYTLYMLTTtqWGEtpshtksiPPTHTRE 433
Cdd:PRK06458 380 WGLMLGALAIAGMPPFGVFISEFLILTAGLArgpLLIAILLLLLLTLAFAALVRRVAGMV--FGE--------PPEAVNR 449
|
250
....*....|....*
gi 84488629 434 HLLMALHILPMALLM 448
Cdd:PRK06458 450 GDLGWLTTSPMFVHL 464
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
91-403 |
3.43e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 83.46 E-value: 3.43e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 91 RKRTFITTIIMLQISLILAFSAMELIMFFIAFEATLIPTLVIITrWGNQMERLNAGTYFLFYTLIGSLPLLVALSFMQTQ 170
Cdd:PRK07234 92 KTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQA 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 171 NGTLSIYMMQLNQPTLtnswshsmwwLALL-TAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMT 249
Cdd:PRK07234 171 NGTFAFSGLATADPEA----------FALIaLGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALD 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 250 LDPLSKTLSYPFMVMALWGVImtssICLRQTDLKSLIAYSSVSHMGLVIAATLtqtqwsyTGAItLMIAHGMTSSMLFCL 329
Cdd:PRK07234 241 VPGLDLIVRIFGVGTALLGVL----FALLEKDLKRMLAFSTISQLGFILAAPL-------VGGL-YALAHGLVKSTLFLC 308
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 84488629 330 ANTNYERTHSRVLLLTQNMQLSLPLmglwwLLASLTNMALPPTINLMGELTIIVSLFNWSNITILMTGLGTLIT 403
Cdd:PRK07234 309 AGALPSRNFTELISQMLGIGKWIPL-----TMASFSIAGFPLLAGFVSKVLTLKNLLPWQAIALNLAAVGTAAS 377
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
94-327 |
1.65e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 78.47 E-value: 1.65e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 94 TFITTIIMLQISLILAFSAMELIMFFIAFEATLIPTLVIITRwGNQMERLNAGTYFLFYTLIGSLPLLVALSFMQTQNGT 173
Cdd:PRK12665 112 IFLPTYLILVAGVSNAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGT 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 174 LSIYMMQL---NQPTLTNSWSHSMwwlaLLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTL 250
Cdd:PRK12665 191 LNMADLAVrldELPSGTRTALFAV----LLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLL 266
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 84488629 251 DPlSKTLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSYTGAITLMIAHGMTSSMLF 327
Cdd:PRK12665 267 FP-GGGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLF 342
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
110-327 |
5.93e-15 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 76.96 E-value: 5.93e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 110 FSAMELIMFFIAFEATLIPTLVIITRwGNQMERLNAGTYFLFyTLIGSLPLLVALSFMQTQNGTL---SIYMMQLNQPTL 186
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGTFdfaDISQGLINDTST 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 187 TNSWshsMWWLALLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIrITMTLDPLSK----------- 255
Cdd:PRK08668 193 GFAL---IVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFL-LVLYVLPGTKlfsefgtyrgv 268
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 84488629 256 -TLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSYTGAITLMIAHGMTSSMLF 327
Cdd:PRK08668 269 pLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
2-401 |
1.08e-14 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 75.78 E-value: 1.08e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 2 LKIIIPTILLLPTTMLCKPKQLWPTTLTSSLGIA-LLSLQWL-----KPSSELTTFS-----NYYLGVDPISAPLLTLSC 70
Cdd:PRK06525 6 LTLLLPFIGALVVFFLPGRRAAELGVLFAALTTLcMLSLAYAfyqagKVAVTLTLVNlgdvaLFGLVIDPVSVLIGFVVV 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 71 WLTPLMILASQNHLTT--------EPTPRKRTFITTIIMLQISLILAFSAMELIMFFiafEATLIPTLVIITRWGNQMER 142
Cdd:PRK06525 86 LLGLLVTLYSTGYMSPgnrehpvhEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFF---EITGLCSWALISYYQSPKAL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 143 LNAGTYFLFyTLIGSLPLLVALSFMQTQNGTLSIYMMQLNQPTLTnswshSMWWLALLTAFMIKMPLYGLHLWLPKAhVE 222
Cdd:PRK06525 163 RSALKALLI-THIGSLGLYLAAATLFLQTGTFALSALSGLHGSLK-----YLVFLGILFAAWGKSAQLPFYSWLPDA-ME 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 223 APIAGSMIL-AAVLLKLGGYGIIRITMTLDPLSKTLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMG---LVI 298
Cdd:PRK06525 236 APTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGymfFGL 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 299 AATLTQTQWSYTGAITLMIAHGMTSSMLFCLANTNYERTHSRVLLLTQNMQLSLPLMGLWWLLASLTNMALPPTINLMGE 378
Cdd:PRK06525 316 SLAILGSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSK 395
|
410 420
....*....|....*....|...
gi 84488629 379 LTIIVSLFNWSNITILMTGLGTL 401
Cdd:PRK06525 396 FPIFAAGFELSVEYWILLPAMVL 418
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
104-386 |
1.14e-14 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 76.31 E-value: 1.14e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 104 ISLILAFSAMELIMFFIAFEATLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSFMQTQNGTLSIYMMQLNQ 183
Cdd:PRK08667 122 LSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASA 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 184 PTLtnswshSMWWLALLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMtlDPLSKTLSYPF-- 261
Cdd:PRK08667 202 GIL------SLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLM--DVLSPELWWGVli 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 262 ----MVMALWGVIMTssicLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSYTGAITLM-----------IAHGMTSSML 326
Cdd:PRK08667 274 llagSISALLGVIYA----LKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGLDTLAllalggalfhsLNHALFKSLL 349
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 327 FCLANTNYERTHSRVLLLTQNMQLSLPLMGLWWLLASLTNMALPPTINLMGELTIIVSLF 386
Cdd:PRK08667 350 FLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
53-387 |
1.74e-13 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 72.11 E-value: 1.74e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 53 NYYLGvdPISAPLLTLSCWLTPLMILASQNHLTTEPtprkrtfITTIIMLQISLILAFSAM----ELIMFFIAFEATLIp 128
Cdd:PRK08377 73 NLYIG--PFAALFVLIIAIVSFIMSIFSLKAVEVEP-------IDKYAMLFLLLMLGATGMiatgDIFNLFVFMEITAI- 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 129 TLVIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSFMQTQNGTLSiyMMQLNQPTLTNSWSHSMWWLALLT-AFMIKM 207
Cdd:PRK08377 143 TAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLN--MAHIAQLAGTIDPTVAQVGLALLIfGLAVEA 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 208 PLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSKTLSYPFMV--MALWGVIMTSSICLRQTDLKSL 285
Cdd:PRK08377 221 ELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLKLViiMATLTVFFAELSALRQKNVKRM 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 286 IAYSSVSHMGLVIAATLTQTQWSYTGAITLMIAHGMTSSMLFCLANTNYERTHSRVLLLTQNMQLSLPLMGLWWLLASLT 365
Cdd:PRK08377 301 IAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALS 380
|
330 340
....*....|....*....|..
gi 84488629 366 NMALPPTINLMGELTIIVSLFN 387
Cdd:PRK08377 381 TVGIPLFNVFWSKFRIILAGLS 402
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
112-372 |
1.74e-13 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 72.77 E-value: 1.74e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 112 AMELIMFFIAFEATLIPTLVIITRWGNQMERLNAGTyfLFYTLIGSLPLLVALSFMQTQNGTLSIYMMqLNQPtltnSWS 191
Cdd:PRK12650 129 ADDVVVLFVAWELVSLASFFLIARSGSGGEAGSIRT--LILTFFGGLTLLAAVAIAATQTGTTSLSGI-LHSD----VWA 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 192 HSMWWLALlTAFMIKMPLYG------LHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSkTLSYPFMVMA 265
Cdd:PRK12650 202 EKPGLTTV-VAVLIAVAAFTksaqfpFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVA-VWNWLLIIVG 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 266 LWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSYTGAITLMIAHGMTSSMLFCLANTNYERTHSRVLLLT 345
Cdd:PRK12650 280 MITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRL 359
|
250 260
....*....|....*....|....*..
gi 84488629 346 QNMQLSLPLMGLWWLLASLTNMALPPT 372
Cdd:PRK12650 360 GSLWRRMPFTFVSVTIAALSMAAVPPL 386
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
137-397 |
2.49e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 71.69 E-value: 2.49e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 137 GNQMERLNAGTYFLFYTLIGSLPLLVALSFMQTQNGTLSIYMMQLNQPTLTNSWSHSMWWLALLTAFMIKMPLYGLHLWL 216
Cdd:PRK12662 153 GRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGVLFIMVGLFIKAALFPFHKWL 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 217 PKAHVEAPIAGSMILAAVLLKLGGYGIIRITMT-----LDPLSKTLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSV 291
Cdd:PRK12662 233 IQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDvfkanFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSI 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 292 SHMGLVIAATLTQTQWSYTGAITLMIAHGMTSSMLFCLANT---NYERTHSRVLLltqNMQLSLPLMGLWWLLASLTNMA 368
Cdd:PRK12662 313 SHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSisyHFGTTKLEDCL---NLWKSMPKITLAFVLLSLSLIG 389
|
250 260 270
....*....|....*....|....*....|..
gi 84488629 369 LPPTINLMGELTIIVSLFN---WSNITILMTG 397
Cdd:PRK12662 390 MPPTSGFVAKWYILDAFIKsnaWIGLVVLLVG 421
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
93-327 |
4.67e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 67.86 E-value: 4.67e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 93 RTFITTIIMLQISLILAFSAMELIMFFIAFE-ATLIPTLVIITRwgNQMERLNAGTYFLF-------YTLIGsLPLLVAL 164
Cdd:PRK08676 102 KVFYLGFNLLLSVITFAFFSDNLALFWIFAElTTVFSAMLIAIL--SARENIDAALKYIFiastamiFAFIG-LIFLFSL 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 165 SFMQTQNGTLSIYMMQLNQPTLTNSWShSMWWLALLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGII 244
Cdd:PRK08676 179 TRQALGTGTLNWTELAAHASLLSPSVL-GASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGIL 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 245 RITMTL--DPLSKTLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSYTGAITLMIAHGMT 322
Cdd:PRK08676 258 RLSALLrqSGAAEQFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLV 337
|
....*
gi 84488629 323 SSMLF 327
Cdd:PRK08676 338 KSGLF 342
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
95-371 |
5.00e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 64.73 E-value: 5.00e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 95 FITTIIMLQISLILAFSAMELIMFFIAFEATLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSFMQTQNGTL 174
Cdd:PRK08376 123 YYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTL 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 175 SI----YMMQLNqPTLTNswshsMWWLALL-TAFMIKMPLYGLHLWLPKAHVEAPIAGSMILaaVLLKLGG-YGIIRITM 248
Cdd:PRK08376 203 NMaylaVKMSEN-PTVVA-----KIALALFiAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLF 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 249 TLDPLS---KTLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVI------AATLTQTQWSYTGAITL---- 315
Cdd:PRK08376 275 SIYGPAinlATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMLlglgvgLAALGDPAMASYGEIALaggi 354
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 84488629 316 --MIAHGMTSSMLFCLANTNYERTHSRVLLLTQNMQLSLPLMGLWWLLASLTNMALPP 371
Cdd:PRK08376 355 yhIVNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPP 412
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
34-392 |
5.67e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 64.45 E-value: 5.67e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 34 IALLSLQWLKPSS---ELTTFSNYYLG--VDPISAPLLTLSCWLTPLMILASQNHLTTE-PTPRKRTFITTIIMLQISLI 107
Cdd:PRK06589 52 ILLIDLLFLKGIRaqfELMDFGNYSIGlhLEPLGLIFLLLIGFLWICALLYTPKYLAINnIDSSSRFLFFFNLTILIGVL 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 108 LAFSAmELIMFFIAFEATLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSFMQTQNGTLSIymmqlnQPTLT 187
Cdd:PRK06589 132 IALSS-DLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDF------VSGGL 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 188 NSWSHSMWWLALLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSKTLSYPFM----- 262
Cdd:PRK06589 205 FSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFAEfnwli 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 263 VMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSYTGAITLMIAHGMTSSMLFCLANTNYERTHSRVL 342
Cdd:PRK06589 285 FIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQV 364
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 84488629 343 LLTQNMQLSLPLMGLWWLLASLTNMALPPTINLMGELTIIVSLFNWSNIT 392
Cdd:PRK06589 365 DKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPW 414
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
100-371 |
2.62e-10 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 62.60 E-value: 2.62e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 100 IMLQISLILAFSAMELIM-----FFIAFEA-TLIPTLVIITrwgNQMERLNAGTYFLFYTL--IGSLPLLVALSFMQTQN 171
Cdd:PRK06521 115 MGFFYNLFLASMVLVLLAddafsFLVAWETmSLSSWFLVIA---NHREAEIRRAGFLYLLMahAGALAILLAFGLLARES 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 172 GTLSIYMMQlnQPTLTNSWSHSMWWLALLtAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLD 251
Cdd:PRK06521 192 GSYDFAAMR--AAHLSPFWASLVFLLALF-GFGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFDLL 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 252 PLSkTLSYPFMVMALWGVIMTSSI--CLRQTDLKSLIAYSSVSHMGLVI----------------AATLtqtqwSYTGAI 313
Cdd:PRK06521 269 GAP-GWWWGVLVLALGAISAVLGVlyALAEHDLKRLLAYSTIENIGIIFvglglamvfiaygmplLAAL-----ALTAAL 342
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 84488629 314 TLMIAHGMTSSMLFCLANTNYERTHSRVLL----LTQNMqlslPLMGLWWLLASLTNMALPP 371
Cdd:PRK06521 343 YHLLNHALFKSLLFLGAGAVLHATGTRDMEklggLIRRM----PWTAWAFLIGCLAISALPP 400
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
2-323 |
5.12e-10 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 61.29 E-value: 5.12e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 2 LKIIIPTILLLPTTMLC---------KPKQLWPTTLTSSLGIALLSLQWLKPSSELTTFSNYYLgVDPISAPLLTLSCWL 72
Cdd:COG1007 4 LLALLPEIILLLGALVLllldlflprRSRRLLAGLALLGLLLALALLLLALGGGTGTAFGGMFV-VDGFALFFKLLILLA 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 73 TPLMILASQNHLTTEPTPRKRTFITTIIMLqISLILAFSAMELIMFFIAFEATLIPTLVIITRWGNQMERLNAGT-YFLF 151
Cdd:COG1007 83 ALLVLLLSRDYLERRGLLRGEFYALLLFAT-LGMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 152 YTLIGSLpLLVALSFMQTQNGTLSIYMMQLNqptLTNSWSHSMWWLA----LLTAFMIKMPLYGLHLWLPKAHVEAPIAG 227
Cdd:COG1007 162 GALSSGF-LLYGISLLYGATGSLNLAGIAAA---LAAGGANSPLLLLglvlVLAGLAFKLSAVPFHMWTPDVYEGAPTPV 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 228 SMILAAVLlKLGGYGI-IRITMT-LDPLSKTLSYPFMVMA----LWGVIMTssicLRQTDLKSLIAYSSVSHMGLVIAAT 301
Cdd:COG1007 238 TAFLATAP-KIAAFAAlLRLLVEaFPGLAADWQLLLAVLAvlsmTVGNLAA----LAQTNVKRMLAYSSIAHAGYLLLGL 312
|
330 340
....*....|....*....|..
gi 84488629 302 LTQTQWSYTGAITLMIAHGMTS 323
Cdd:COG1007 313 AAGTPLGVSAALFYLLAYLFMN 334
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
105-401 |
5.70e-10 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 61.47 E-value: 5.70e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 105 SLILAF-SAM-------ELIMFFIAFEATLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSFMQTQNGTLSI 176
Cdd:PRK12647 99 SYILLFmASMlglvlsdNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSL 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 177 YMMQLNQPTLTNS-WSHSMWWLALLTAFMiKMPLYGLHLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGIIRITMTLdplS 254
Cdd:PRK12647 179 SELLASGDVIREHpLYLAILLLVLGGAFT-KSAQFPFHFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLARLNPVL---G 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 255 KTLSYPFMVMALWGVIM--TSSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSYTGAITLMIAHGMTSSMLFCLANT 332
Cdd:PRK12647 254 GTPLWQTILPLFGGLTMltGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGI 333
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 84488629 333 NYERTHSRVLLLTQNMQLSLPLMGLWWLLASLTNMALPPTINLMGELTIIVSLFNWSNITILMTGLGTL 401
Cdd:PRK12647 334 IDHETGTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
59-401 |
8.66e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 60.73 E-value: 8.66e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 59 DPISAPLLTLSCWLTPLMILASqnhLTTEPTPRKRTFITTIIM-LQISLILAFSAMELIMFFIAFEATLIPTLVIITRWG 137
Cdd:PRK07691 76 DMFAALLVLTSSIITFLVILYS---FQTIGIERERYYYYPSVLfMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 138 NQMERLNAGTYFLFyTLIGSLPLLVALSFMQTQNGTL-----SIYMMQLNQptlTNSWSHSMWWLALLTAFMIKMPLYGL 212
Cdd:PRK07691 153 TKIQLRESIKYVLI-NVVSSAFFVVAVAILYSVVGTLnmadiSVKIAELSA---GQTGLITVVAILFLFVFATKAGLFPL 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 213 HLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSKTLSYPFM-VMALWGVIMTSSICLRQTDLKSLIAYSSV 291
Cdd:PRK07691 229 YFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLIlILALLTIIFGVIGAVAYFDIKKIIIYNIM 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 292 SHMGLVIAATLTQTQWSYTGAITLMIAHGMTSSMLFCLANTNYERTHSRVLLLTQNMQLSLPLMGLWWLLASLTNMALPP 371
Cdd:PRK07691 309 IAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPP 388
|
330 340 350
....*....|....*....|....*....|....
gi 84488629 372 TINLMGELTIIVSLFN----WSNITILMTGLGTL 401
Cdd:PRK07691 389 LSGFYGKFFIVEGTFEagfyVSGIIVLLSSLLVL 422
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
95-370 |
2.85e-09 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 59.38 E-value: 2.85e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 95 FITTIIMLQISLILAFSAMELIMFFIAFEATLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSFMQTQNGTL 174
Cdd:PRK12646 112 FYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTN 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 175 SIYMMQLNQPTLTNS-WSHSMWWLALLTAFMiKMPLYGLHLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGIIRITMTLDp 252
Cdd:PRK12646 192 NITEILGQADHIKNHgLFIPMIFMFLLGAFT-KSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTPLLG- 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 253 LSKTLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIA--------ATLTQTQWSYTGAITL------MIA 318
Cdd:PRK12646 269 LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAmvgigggyAQHQQDAIASIYVFVLfaalfhLMN 348
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 84488629 319 HGMTSSMLFCLANTNYERTHSRVLLLTQNMQLSLPLMGLWWLLASLTNMALP 370
Cdd:PRK12646 349 HAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVP 400
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
95-439 |
3.86e-09 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 58.42 E-value: 3.86e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 95 FITTIIMLQISLILAFSAMELIMFFIAFEATLIPTLVIITrWGNQMERLNAGTYFLFYTLIGSLPLLVALSFMQTQNGTL 174
Cdd:PRK12663 110 FPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 175 SIYMMQLNQPTLTNSWSHSMWWLALLTAFMIKMPLYGLHlWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRI-TMTLDPL 253
Cdd:PRK12663 189 NMAHIAMRLNDMGDTATLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVfTLLFPQE 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 254 SKTLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSYTGAITLMIAHGMTSSMLFCLANTN 333
Cdd:PRK12663 268 RELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSL 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 334 YERTHSRVLLLTQNMQLSLPLMGLWWLLASLTNMALPPTINLMGELTIIVSLFN----WSNITILMTGLGTLITatyTLY 409
Cdd:PRK12663 348 VRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDngayILLALMLITSLITMYS---LFR 424
|
330 340 350
....*....|....*....|....*....|
gi 84488629 410 MLTTTQWGETPSHTKSIPPTHTREHLLMAL 439
Cdd:PRK12663 425 IFFLAYWGDKDGEEVNFKPIPLYRKLPLSI 454
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
115-401 |
4.11e-09 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 58.63 E-value: 4.11e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 115 LIMFFIAFEATLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSFMQTQNGTLSIYMMQLNQPTLTNswshsm 194
Cdd:COG1009 133 LLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTILS------ 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 195 WWLALLTAFMI------KMPLYGLHLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGIIRITMTLDpLSKTLSYPFMVMALW 267
Cdd:COG1009 207 SPLLTLILLLLllgafgKSAQFPLHFWLPDA-MEGPTPVSALLhAATMVKAGVYLLARLSPLFA-LSPVWLTVVAIIGAI 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 268 GVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLTQtqwSYTGAITLMIAHGMTSSMLFCLANTNYERTHsrvlllTQN 347
Cdd:COG1009 285 TALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATG------TRD 355
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 348 M-QLS-----LPLMGLWWLLASLTNMALPPTINLMGELTIIVSLFNWSNITILMTGLGTL 401
Cdd:COG1009 356 IrKMGglrkkMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALL 415
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
148-300 |
9.17e-09 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 57.60 E-value: 9.17e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 148 YFLFYTLIGSLpLLVALSFMQTQNGTLSIymmqlnqpTLTNSWSHSMWWLALLtAFMIKMPLYGLHLWLPKAHVEAPIAG 227
Cdd:PRK12668 148 YLLVHVLGGVL-LLAGILLHYAETGSFAF--------GAIAGLGGTAAWLILI-GFGVNAAFPPLHAWLPDAYPEATVTG 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 84488629 228 SMILAAVLLKLGGYGIIRitmtLDPLSKTLSYPFMVMALWGVIMTssicLRQTDLKSLIAYSSVSHMGLVIAA 300
Cdd:PRK12668 218 SVFLSAFTTKTAVYALAR----AFPGTELLIYIGAAMAVYGVFFA----LLENDLRRLLSYHIVSQVGYMVAG 282
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
95-306 |
2.71e-08 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 55.72 E-value: 2.71e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 95 FITTIIMLQISLILAFSAMELIMFFIAFEATLIPTLVIITRWGNQMERLNAGtyfLFYTLIGSLP---LLVALSFMQTQN 171
Cdd:TIGR01770 104 FYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAG---LKYFILGAFSsglLLFGISLIYGFT 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 172 GTLSIYMMQLNQPTLTNS-WSHSMWWLALLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMT- 249
Cdd:TIGR01770 181 GSLNFEDLLLFLSNGMLNiSLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYi 260
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 84488629 250 LDPLSKTLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQ 306
Cdd:TIGR01770 261 LFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTL 317
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
4-323 |
1.08e-07 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 54.06 E-value: 1.08e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 4 IIIPTILLLPTTML-------CKPKQLWPTTLTSSLGIALLSLQWLKPSSELTTFSNYYLGVDPISAPLLTLSCWLTPLM 76
Cdd:PRK05777 10 LLLPELILLGAAVVlllidafVRRHSRRATLAVLALLLALVALLFVLGAAGGGTAFGGMLVVDGFALFLKGLILLASLLA 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 77 ILASQNHLTTEPTPRkrtFITTIIMLQISLILAFSAMELIMFFIAFEATLIPTLVIITRWGNQMERLNAGtyfLFYTLIG 156
Cdd:PRK05777 90 LLLARPYLEDRGRGE---FYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAA---IKYFVLG 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 157 SLP---LLVALSFMQTQNGTLSIYMMQlnqpTLTNSWSHSMWWLALLTAFMI-----KMPLYGLHLWLPKAHVEAPIAGS 228
Cdd:PRK05777 164 ALAsgfLLYGMSLLYGATGSLSFAGIA----KALADGSGNSLLLLFGLVFLLvglafKLSAVPFHMWTPDVYEGAPTPVT 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 229 MILAAVLlKLGGYGII-RITMT-LDPLSKTLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQ 306
Cdd:PRK05777 240 AFLATAP-KIAAFAVLlRLLVVaFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTA 318
|
330
....*....|....*..
gi 84488629 307 WSYTGAITLMIAHGMTS 323
Cdd:PRK05777 319 EGYSAVLFYLLAYLFMT 335
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
155-390 |
1.28e-07 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 54.06 E-value: 1.28e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 155 IGSLPLLVALSFMQTQNGTLSiyMMQLNQPTLTNSWSHSMWWLALlTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAV 234
Cdd:PRK08042 145 LGTLLLAIACWLLWQRYGTLD--LRLLDMRMQQLPLGSDIWLLGV-IGFGLLAGIIPLHGWVPQAHANASAPAAALFSTV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 235 LLKLGGYGIIRITMTLDPLSKTLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLV---IAATLTQTQWS--- 308
Cdd:PRK08042 222 VMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIIllgLGAGVTGIALEqpa 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 309 -----YTGAITLMIAHGMTSSMLFCLANTNYERTHSRVLLLTQNMQLSLPLMGLWWLLASLTNMALPPTINLMGELTIIV 383
Cdd:PRK08042 302 lialgLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQ 381
|
....*..
gi 84488629 384 SLFNWSN 390
Cdd:PRK08042 382 SFFKLSN 388
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
150-327 |
3.48e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 49.54 E-value: 3.48e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 150 LFYTLIGSLPLLVALSFMQTQNGTLSIYMMQLNQPTltnSWSHSMWWLALLTAFMIKMPLYGLHLWLPKAhVEAPIAGSM 229
Cdd:PRK12644 163 LLVTTAGGLAMLVGIIILGQAAGTYRLSELLADPPT---GPAVSVAVVLILVGALSKSAIVPFHFWLPGA-MAAPTPVSA 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 230 IL-AAVLLKLGGYGIIRITmtlDPLSKTLSYPFMVMALWGVIMTSS--ICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQ 306
Cdd:PRK12644 239 YLhAAAMVKAGIYLVARLA---PGFADVPVWRPTVLVLGLATMLLGgwRALRQHDLKLILAYGTVSQLGFLTVLVGIGTR 315
|
170 180
....*....|....*....|.
gi 84488629 307 WSYTGAITLMIAHGMTSSMLF 327
Cdd:PRK12644 316 DAALAGLAMLLAHALFKAALF 336
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
116-403 |
5.37e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 48.63 E-value: 5.37e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 116 IMFFIAFEATLIPTLVIITRWGNQMErlnAGTYFLFYTLIGSLPLLVALSFMQTQNGTLSIYMMQLNQPTLTNSWshsmw 195
Cdd:PRK06459 95 LLFLAGWEIMTIPSYVAIALTKKNKR---PAFVFMAFGELSTVLILAGFAWAFIISGTTNFSYLPSPVPLILASF----- 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 196 wlalltAFMIKMPLYGLHL--WLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITM-TLDPLSKTLSYPFMVMALWGVIMT 272
Cdd:PRK06459 167 ------GFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTIlTQTIPIGYFGLTILAIGAFSILFG 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 273 SSICLRQTDLKSLIAYSSVSHMGLVIAAT----LTQTQWSYTGAITLM------IAHGMTSSMLFCLANTNYERTHSRVl 342
Cdd:PRK06459 241 ALYAYVSENVKGLLAFSTIENNGAILVALglymVTKQLITSIEHFSLItvilysFAHSVAKTGLFLSSGLQEKQSITYS- 319
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 84488629 343 lltQNMQLSLPLMGLWWLLASLTnmALPPTINLMGELTIIVSLFNWSNITILMTGLGTLIT 403
Cdd:PRK06459 320 ---KKIRNRWIELGLTLLASSLS--GLLPNIGGVASWLLLESLFMFAYVLHNVISILFIVT 375
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
59-370 |
6.95e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 48.42 E-value: 6.95e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 59 DPISAPLLTLSCWLTPLMILASQNHLTTEP-TPRKRTFITTIIMLQISLILAFSAMELimfFIAFEATLIPTLVIITRWG 137
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPhVPRFLCYLSLFTFLMMVLVTSDNYLQL---FIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 138 NQMERLNAGTYFLFYTLIGSLPLLVALSFMQTQNGTLSIYMMQ---LNQPTLTNSWSHSMWWLALLTAFMI--------- 205
Cdd:MTH00032 156 TRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNggsVGSGIMDRGYYGGGAYESPLAPFAIigillligc 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 206 --KMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITmtldPLSKTLSYPFMVMALWGVI---MTSSICLRQT 280
Cdd:MTH00032 236 igKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSF----PLFEKAPLTLLIITIFGALtafFAATVGLVQN 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 281 DLKSLIAYSSVSHMGLVIaaTLTQTQWSYTGAITLMIAHGMTSSMLFCLA-----NTNYERTHSRVLlltQNMQLSLPLM 355
Cdd:MTH00032 312 DLKKVIAYSTCSQLGYMV--LIIGIEGSHNVGLFHLVNHAFFKALLFLSAgsvihSTTVDEQDMRKM---GGLIHSIPFT 386
|
330
....*....|....*
gi 84488629 356 GLWWLLASLTNMALP 370
Cdd:MTH00032 387 YTMMLIGSFSIMGLP 401
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
51-300 |
1.51e-05 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 47.38 E-value: 1.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 51 FSNYY-LGVDPISAPLLTLSCWLTPLMILASQNHLTTEP-TPRkrtFITTIIMLQISLILAFSAMELIMFFIAFEATLIP 128
Cdd:MTH00020 70 LTVYFgLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPhIPR---FMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLC 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 129 TLVIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSFMQTQNGTLSiYMMQLNQPTLTNSWSHSMWWLALLTAFMIKMP 208
Cdd:MTH00020 147 SYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLD-FSSVFNMVVSAPSSDITLICLFLFIGAVGKSA 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 209 LYGLHLWLPKAhVEAPIAGS-MILAAVLLKLGGYGIIRITmtldPLSKTLSYPFMVMALWG---VIMTSSICLRQTDLKS 284
Cdd:MTH00020 226 QLGLHTWLPDA-MEGPTPVSaLIHAATMVTAGVFLLIRSS----PLFEQAPLALIIVTIVGsltVFFAATVGLVQNDLKK 300
|
250
....*....|....*.
gi 84488629 285 LIAYSSVSHMGLVIAA 300
Cdd:MTH00020 301 VIAYSTCSQLGYMVVA 316
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
101-298 |
2.69e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 46.18 E-value: 2.69e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 101 MLQISLILAFSAMELIMFFIAFEATLIPTLVIITRWGNQMERLNAG-TYFLFYTLIGSLPLL-VALSFMQTQNGTLSIYM 178
Cdd:MTH00196 1 MVALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGlKYFVLGALSSGLFLFgCALLCGTTGGLHLSYIN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 179 MQLNQPTLTNSWSHSMWWLALLTAFMIKMPLYGLHLWLPKAHVEAPiagsMILAAVLLKLGGYGIIRITMTLDPLSKTLs 258
Cdd:MTH00196 81 LVLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAP----TKTTALLAIVPKLGIFSILVSIGLNVNIL- 155
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 84488629 259 ypfMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVI 298
Cdd:MTH00196 156 ---LIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVL 192
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
90-300 |
3.31e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 46.12 E-value: 3.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 90 PRKRTFITTIIMLQISLILAFSAMELIMFFIAFEATLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSFMQT 169
Cdd:MTH00208 135 PNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLI 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 170 QNGTLSIY-MMQLNQPtltNSWSHSMWWLALLTAFMIKMPLYGLHLWLPKAhVEAPIAGS-------MILAAVLLklggy 241
Cdd:MTH00208 215 NFNSWNLNeILSLNNS---NSFLINILLFGILLAAAGKSAQFGLHPWLPAA-MEGPTPVSallhsstMVVAGVFL----- 285
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 84488629 242 gIIRITMTLDPLSKTLSYPFMVMALwGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAA 300
Cdd:MTH00208 286 -LIRTSPLISNSPWFLSLCLILGSL-TALFAASTAISQHDIKKIIAYSTTSQLGLMVVA 342
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
154-402 |
3.50e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 45.65 E-value: 3.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 154 LIGSLPLLVALSFMQTQNGTLSIYMMQ------LNQPTLTNSWSHSMWWLA--LLTAFMIKMPLYGLHLWLPKAHVEAPI 225
Cdd:MTH00144 37 LIGFLPLLVYKKKSSESESVVKYFIIQslgsslLIFGSLIMYNLSFSWFSMslLLLGLCLKLGLFPFHFWVPSVMAGLSW 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 226 AGSMILAAVLlKLggygIIRITMTLDPLSKTLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLtqt 305
Cdd:MTH00144 117 LSCFLLLTWQ-KV----APLFLLSNFLDLYWLAYLLCVISVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAIL--- 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 306 qWSYTGAITLMIAHGMTSSMLFCLANTNYERTHSRVLlltqnMQLSLPLMGLWWLLASLTNMALPPTINLMGELTIIVSL 385
Cdd:MTH00144 189 -HGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLG-----SLKPSYKTGLSIISLLLSLGGLPPFLGFCSKLLVLISS 262
|
250
....*....|....*...
gi 84488629 386 FNWS-NITILMTGLGTLI 402
Cdd:MTH00144 263 MESSpLLLILLLLLGSLI 280
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
142-402 |
3.65e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 46.00 E-value: 3.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 142 RLNAGTYFLFYTLIGSLPLLVALSFMQTQNGTLSIYMMQLNQPTLTNSWShsmwWLA------LLTAFMIKMPLYGLHLW 215
Cdd:PRK12666 157 RVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLAQRIAQLPAADR----ALLeagaalLLVVFLIKAAMWPLNFW 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 216 LPKAHVEA--PIAGsmiLAAVLLKLGGYGIIRITMTLDPLSKTLSYPFMVMALWGVIMTSSIC-----LRQTDLKSLIAY 288
Cdd:PRK12666 233 LPPAYAAAsaPVAA---LFAIMTKVGIYAILRLSTLLFGPEAGASAGFGQDWLLPGGLATLAFgaigvLAAQRLRRLAAY 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 289 SSVSHMGLVIAATLTQTQWSYTGAITLMIAHGMTSSMLFCLAN-----------------TNYERTHSRVLLLTQNMQLS 351
Cdd:PRK12666 310 LVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLADlverqrgaaadrlavtpELYDLDEEEEEEVGVAIPAT 389
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 84488629 352 LPLMGLWWLLASLTNMALPPTINLMGELTIIVSLFN--------WSNITILMTGLGTLI 402
Cdd:PRK12666 390 MALLGLLFFICALALAGLPPLSGFLGKFALLQALLNppgagaawWLWALVLLSGLAALI 448
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
116-294 |
8.56e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 45.20 E-value: 8.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 116 IMFFIAFEATLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSFMQTQNGTLSIYMMqLNQPTLTNSWSHSMW 195
Cdd:PRK12649 134 IQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATI-LQDSELIENIKGHPL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 196 WLALLTAFMI----KMPLYGLHLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGIIRITMTLdplSKTLSYPFMV--MALWG 268
Cdd:PRK12649 213 FLITLILIFIgaaaKSAQGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARIHPIF---SGTEAWFILVsgTGMIT 288
|
170 180
....*....|....*....|....*.
gi 84488629 269 VIMTSSICLRQTDLKSLIAYSSVSHM 294
Cdd:PRK12649 289 MVLAGFLAFRQTDIKAILAYSTISQL 314
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
196-327 |
8.86e-05 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 45.01 E-value: 8.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 196 WLALLTAF------MIKMPLYGLHLWLPKAhVEAPIAGS-MILAAVLLKLGGYGIIRitmtLDPLSKTLSYPFMVMALWG 268
Cdd:PRK07376 224 WLALLLCIlvflgpMAKSAQFPLHVWLPDA-MEGPTPISaLIHAATMVAAGVFLVAR----MYPVFEQFPAVMTVIAWTG 298
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 84488629 269 VI---MTSSICLRQTDLKSLIAYSSVSHMGLVIAATLTQtqwSYTGAITLMIAHGMTSSMLF 327
Cdd:PRK07376 299 AItafLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCG---AYSAGLFHLMTHAYFKAMLF 357
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
115-299 |
1.24e-04 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 44.53 E-value: 1.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 115 LIMFFIAFEATLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSFMQTQNGTLSIYMMQLNQPTLTNswsHSM 194
Cdd:PRK12645 132 LIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIREMIANADEIQN---SPL 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 195 WWLA----LLTAFMiKMPLYGLHLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGIIRITmtldPLSKTLSYPFMVMALWGV 269
Cdd:PRK12645 209 FIPAmiliLLGAFT-KSAQFPFYIWLPDA-MEAPTPVSAYLhSATMVKAGIYLVARFT----PIFAGSQVWFWTVTLVGL 282
|
170 180 190
....*....|....*....|....*....|...
gi 84488629 270 IM---TSSICLRQTDLKSLIAYSSVSHMGLVIA 299
Cdd:PRK12645 283 ITlfwGSLNAVKQTDLKGILAFSTVSQLGLIMS 315
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
197-327 |
7.75e-04 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 41.82 E-value: 7.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 197 LALLTAFMIKMPLYGLHLWLPKAhVEAPIAGSMILAAVLLKLGGYGIIRItMTLDPLSKTLSYPFMVMALWGVIMTSSIC 276
Cdd:PRK07390 225 LALIAGPTGKCAQFPLHLWLDEA-MEGPNPASILRNSVVVATGAWVLIKL-QPVLALSPVALTVLIVIGTVTAIGASLVA 302
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 84488629 277 LRQTDLKSLIAYSSVSHMGLV-IAATLTQTQWsytgAITLMIAHGMTSSMLF 327
Cdd:PRK07390 303 IAQIDIKRALSYSTSAYLGLVfIAVGLQQPDI----ALLLLLTHAIAKALLF 350
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
65-344 |
1.74e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 40.53 E-value: 1.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 65 LLTLSCWLTPLMILASQNHltteptPRKRTFITTIIMLQISLILAFSAMELIMFFIAFEATLIPTLVIITRWGNQMERLN 144
Cdd:PRK06591 93 FLVFCHKITNQTILKYINN------NRKSLFYGILLFAHTGYLGMIATNDFFNLYVFIEISALSSYVLIASGNNPKSLIG 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 145 AGTYFLFYTlIGSLPLLVALSFMQTQNGTLSIYMMQLNQPTLTNSWSHSMWWLALLTAFMIKMPLYGLHLWLPKAHVEAP 224
Cdd:PRK06591 167 AFDYLIMGS-IGATLILIAIGFLLSITGSLNMTDIAAYLQEHTNSRIITIAIGFFLIGAILKTAFFPMHFWMMRAYNNTA 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 225 IAGSMILAAVLLKLGGYGIIRITMTL---DPLSKTLSYPFMVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIaaT 301
Cdd:PRK06591 246 SVILVYLAGISTIIGIYIIYKFTYIIigyETIKTAITNFIRPIALATLIIAPYFAYQAKNFKNIIIYSCFTQIGYVF--L 323
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 84488629 302 LTQTQWSYTGAITLMIAHGMTSSMLFCLA--NTNYERTHSRVLLL 344
Cdd:PRK06591 324 LYVTENGIIILPSLLLADSINKIALFLIDayNESYKREPNKVLII 368
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
90-327 |
2.51e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 40.32 E-value: 2.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 90 PRKRTFITTIIMLQISLILAFSAMELIMFFIAFEATLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSFMQT 169
Cdd:MTH00211 107 PNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIGLLLSMVWLLL 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 170 QNGTLSIymmqlnQPTLTNSWSHSMWWLALLTAFMIKMPLYGLHLWLPKAhVEAPIAGS-------MILAAVLLklggyg 242
Cdd:MTH00211 187 NLNSWEI------SQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSA-MEGPTPVSallhsstMVVAGVFL------ 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 243 IIRitmtldpLSKTLSYPFMVMALWGVI------MTSSICLRQTDLKSLIAYSSVSHMGL-VIAATLTQTQWsytgAITL 315
Cdd:MTH00211 254 LIR-------LSPLFQNNQLILGAVLLLgaltmlFGALCALTQNDIKKIVAFSTTSQLGLmMVTLGLNQPQL----AFLH 322
|
250
....*....|..
gi 84488629 316 MIAHGMTSSMLF 327
Cdd:MTH00211 323 ICTHAFFKAMLF 334
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
19-355 |
3.22e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 39.68 E-value: 3.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 19 KPKQLW-PTTLTSSLGIALLSLQWLKPSSELTTFSNYYLGVDPISAPLLTLSCWLTPLMILASQNHLTTEPtpRKRTFIT 97
Cdd:PRK08168 27 LTRALWrIAQAASLAGLFLALLGLVLFATGAAWPAAAWLEVSGLGLVMAALVQLLGWVIGRFSHRYLQGEP--GQRRYVR 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 98 TIIMLQISLILAFSAMELIMFFIAFEATLIPTLVIITRWGN-QMERLNAGTYFLFYTLiGSLPLLVALSFMQTQNGTLSI 176
Cdd:PRK08168 105 ALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDrPFARLAAHKKFIADRL-AELLLLAAAALAYLEVGSLSL 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 177 YMMQLNQPTLTNSWSHSMWWLALLTAFMIKMPLYGLHLWLPKAhVEAPIAGSMILAAVLLKLGGYGIIRITmtldPLSKT 256
Cdd:PRK08168 184 SALWAHLAAQGASPSLQAAALLLVLAVILKTAQLPVHGWLIQV-MEAPTPVSALLHAGVVNLGGFVLIRFA----PLLEQ 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 257 LSYPFMVMALWGVIMTSSIC---LRQTDLKSLIAYSSVSHMGLV---IAATLtqtqwsYTGAITLMIAHGMTSSMLFCLA 330
Cdd:PRK08168 259 APPARWLLVLVGLATAVLAGlvmLTRISIKVRLAWSTVAQMGFMlleCGLGL------YELALLHLVAHSLYKAHAFLSA 332
|
330 340
....*....|....*....|....*
gi 84488629 331 NTNYERTHSRVLLLTQNMQLSLPLM 355
Cdd:PRK08168 333 SEAVRDTRLRRLQGPQSAAGVVSLL 357
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
85-396 |
7.15e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 38.61 E-value: 7.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 85 TTEPTPRKRTFITTIIMlqiSLILAFSAMELIMFFIAFEATLIPTLVIITRWGNQMERLNAGTYFLFYTLiGSLPLLVAL 164
Cdd:MTH00011 1 MMSTFPTMFLFSSTMTL---GTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQAL-GSGLLLLGM 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 165 SFMQTQNGTLSIYMMqlnqptltnswshsmwwLALLTAFMIKMPLYGLHLWLPkaHVEAPIagSMILAAVLLKLGGYGII 244
Cdd:MTH00011 77 TMMWSFPSLLKNITA-----------------LMLLVSLMLKLGMAPCHFWFP--SVMSSI--SWTLCLILSTWQKIAPL 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 245 RITMTLDPLSKTLSYPFMVMAlwGVIMTSSICLRQTDLKSLIAYSSVSHMGLViaaTLTQTQWSYTGAITLMIAHGMTSS 324
Cdd:MTH00011 136 SILFFFTSHNILPMMTSMAAM--SALAGGLGGMNQTQLRPLLAYSSIGHMGWM---TMISVFSPSMAILYFMTYIIITTP 210
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 84488629 325 MLFCLANTNYERTHSRVLLLTQNMQLSLPLMGLWWLLAsltnmALPPTINLMGELTIIVSLFNWSNITILMT 396
Cdd:MTH00011 211 LMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLSLG-----GLPPFTGFMPKLMAIETLTSNSMILILLV 277
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
262-371 |
8.41e-03 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 38.47 E-value: 8.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488629 262 MVMALWGVIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSYTGAITLMIAHGMTSSMLFCLANTNYERTHSRV 341
Cdd:PRK06277 270 IALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSN 349
|
90 100 110
....*....|....*....|....*....|
gi 84488629 342 LLLTQNMQLSLPLMGLWWLLASLTNMALPP 371
Cdd:PRK06277 350 LRKLGGLLPVMPVVAFMVLCAKLAISGVPP 379
|
|
| |
