|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
24-595 |
0e+00 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 939.97 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 24 YPIMKTKTAVKMAFFITLIPLIMFIHLGIESTTTNFNWSNTSTFNINMSFKFDQYSMMFMPIALYVTWSILEFTYWYMAM 103
Cdd:MTH00004 31 NSPTTIKTTVKLAFLISLIPLTLFLNSGTESITTNWPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMAS 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 104 DPYTTKFFKYLLIFLVAMMILVTANNMFQLFIGWEGVGIMSFLLIGWWRGRTEANVSALQAIIYNRTGDIGLMLTMSWLA 183
Cdd:MTH00004 111 DPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSMAWLA 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 184 TNMNTWELQQMFSFTQPTPLLPLLGLIlAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILATN 263
Cdd:MTH00004 191 MTLNTWEIQQLFSPTQTPTLPLLGLIL-AATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNN 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 264 NSALSICLCLGAITALFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGLNQPQLAFLHIAMHAFFKAMLFLCSGSIIHSL 343
Cdd:MTH00004 270 QTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNL 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 344 NNEQDIRKMGGLHKSMPITSSCLTIGNMALMGMPFMTGFYSKDIIIETMNTSYLNAWALLLTLIATLLTATYSLRITTFV 423
Cdd:MTH00004 350 NNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLV 429
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 424 QMGLPRYHSTALPNENNPEIIKPITRLAVGSIIAGLIISLNITPLKIPPTTMPTQIKIAALTVTILGLLMALELAMMTNK 503
Cdd:MTH00004 430 QTGFPRTPPTTPINENTPTIINPITRLALGSILAGLLISSTILPTKTPPMTMPTTTKLAALIVTILGILLALELSNMTTT 509
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 504 M-PMKPSNIHNLSNLSIHFNTLTHRSFPMASLKFNQNIATHLMDLSWYEKIGPKGLINSQITPIKFTSLSQKGLIKMYMT 582
Cdd:MTH00004 510 LtPPKQNTLHNFSNQLAFFNPLTHRLLPMTLLKSSQKIATHLIDLSWLEKMGPKGLANLQLTASKTLTTLQKGLIKNYLT 589
|
570
....*....|...
gi 84488630 583 SFILSIMLMMIIM 595
Cdd:MTH00004 590 SFALTILLLLLLT 602
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
25-595 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 903.05 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 25 PIMKTKTAVKMAFFITLIPLIMFIHLGIESTTTNFNWSNTSTFNINMSFKFDQYSMMFMPIALYVTWSILEFTYWYMAMD 104
Cdd:MTH00137 36 ALTHVKTAVKTAFFVSLLPLFLFLNQGAETIITNWNWMNTLTFDINISFKFDHYSIIFTPIALYVTWSILEFASWYMHAD 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 105 PYTTKFFKYLLIFLVAMMILVTANNMFQLFIGWEGVGIMSFLLIGWWRGRTEANVSALQAIIYNRTGDIGLMLTMSWLAT 184
Cdd:MTH00137 116 PNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGLILAMAWMAT 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 185 NMNTWELQQMFSFTQPTPLLPLLG-LILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILATN 263
Cdd:MTH00137 196 NLNSWEIQQIFALSKDFDLTLPLLgLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENN 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 264 NSALSICLCLGAITALFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGLNQPQLAFLHIAMHAFFKAMLFLCSGSIIHSL 343
Cdd:MTH00137 276 QTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSL 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 344 NNEQDIRKMGGLHKSMPITSSCLTIGNMALMGMPFMTGFYSKDIIIETMNTSYLNAWALLLTLIATLLTATYSLRITTFV 423
Cdd:MTH00137 356 NDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVVFFV 435
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 424 QMGLPRYHSTALPNENNPEIIKPITRLAVGSIIAGLIISLNITPLKIPPTTMPTQIKIAALTVTILGLLMALELAMMTNK 503
Cdd:MTH00137 436 SMGHPRFNPLSPINENNPAVINPIKRLAWGSIIAGLLITSNILPLKTPVMTMPPLLKLAALIVTILGLLIALELASLTNK 515
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 504 ----MPMKPSniHNLSNLSIHFNTLTHRSFPMASLKFNQNIATHLMDLSWYEKIGPKGLINSQITPIKFTSLSQKGLIKM 579
Cdd:MTH00137 516 qfkpTPTLPP--HHFSNMLGFFPAIIHRLTPKLNLTLGQTIATQMVDQTWLEKTGPKGIASLQLPLITTTSNIQQGMIKT 593
|
570
....*....|....*.
gi 84488630 580 YMTSFILSIMLMMIIM 595
Cdd:MTH00137 594 YLTLFLLTLALATLLL 609
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
30-595 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 829.11 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 30 KTAVKMAFFITLIPLIMFIHLGIESTTTNFNWSNTSTFNINMSFKFDQYSMMFMPIALYVTWSILEFTYWYMAMDPYTTK 109
Cdd:MTH00108 37 KTTISYAFIISLIPTMMFIHSGQEMIISNWHWMTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINR 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 110 FFKYLLIFLVAMMILVTANNMFQLFIGWEGVGIMSFLLIGWWRGRTEANVSALQAIIYNRTGDIGLMLTMSWLATNMNTW 189
Cdd:MTH00108 117 FFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSW 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 190 ELQQMFSFTQPTPLLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILATNNSALSI 269
Cdd:MTH00108 197 DLQQIFMLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTL 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 270 CLCLGAITALFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGLNQPQLAFLHIAMHAFFKAMLFLCSGSIIHSLNNEQDI 349
Cdd:MTH00108 277 TLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDI 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 350 RKMGGLHKSMPITSSCLTIGNMALMGMPFMTGFYSKDIIIETMNTSYLNAWALLLTLIATLLTATYSLRITTFVQMGLPR 429
Cdd:MTH00108 357 RKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPR 436
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 430 YHSTALPNENNPEIIKPITRLAVGSIIAGLIISLNITPLKIPPTTMPTQIKIAALTVTILGLLMALELAMMTNKMPMK-P 508
Cdd:MTH00108 437 FPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTTIPQMTMPLYLKLTALAVTILGFILALELNLLTNNLKFKyP 516
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 509 SNIHNLSNLSIHFNTLTHRSFPMASLKFNQNIATHLMDLSWYEKIGPKGLINSQITPIKFTSlSQKGLIKMYMTSFILSI 588
Cdd:MTH00108 517 SNTFKFSNMLGYFPTIMHRLPPYMNLTMSQKLASMLLDLIWLEKILPKTISLIQMKASTTIS-NQKGLIKLYFLSFLITL 595
|
....*..
gi 84488630 589 MLMMIIM 595
Cdd:MTH00108 596 TLSLLLF 602
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
24-595 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 816.07 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 24 YPIMKTKTAVKMAFFITLIPLIMFIHLGIESTTTNFNWSNTSTFNINMSFKFDQYSMMFMPIALYVTWSILEFTYWYMAM 103
Cdd:MTH00066 29 NFHTNVKTSVKTAFFISLIPLMIFINQGLESITTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHS 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 104 DPYTTKFFKYLLIFLVAMMILVTANNMFQLFIGWEGVGIMSFLLIGWWRGRTEANVSALQAIIYNRTGDIGLMLTMSWLA 183
Cdd:MTH00066 109 DPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLA 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 184 TNMNTWELQQMFSfTQPTPLLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILATN 263
Cdd:MTH00066 189 MNTNSWELQQIFL-LNDNSTLPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENN 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 264 NSALSICLCLGAITALFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGLNQPQLAFLHIAMHAFFKAMLFLCSGSIIHSL 343
Cdd:MTH00066 268 QTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSL 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 344 NNEQDIRKMGGLHKSMPITSSCLTIGNMALMGMPFMTGFYSKDIIIETMNTSYLNAWALLLTLIATLLTATYSLRITTFV 423
Cdd:MTH00066 348 NDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFS 427
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 424 QMGLPRYHSTALPNENNPEIIKPITRLAVGSIIAGLIISLNITPLKIPPTTMPTQIKIAALTVTILGLLMALELAMMTNK 503
Cdd:MTH00066 428 SMKFPRSLPLSPINENNPLIINPIKRLAWGSIIAGLLIIFNILPMKPQILTMPTFMKLAALLVTLLGLLIALDLAKITSK 507
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 504 MPMKPsNIHNLSNLSIHFNTLTHRSFPMASLKFNQNIATHLMDLSWYEKIGPKGLINSQITPIKFTSLSQKGLIKMYMTS 583
Cdd:MTH00066 508 TTPKT-KMHSFSNLLAFFPTIIHRLSPKTNLNSGQNIATHLTDMTWYEKSGPKGLTNQQLPPIKTITNIQTGLIKTYLTL 586
|
570
....*....|..
gi 84488630 584 FILSIMLMMIIM 595
Cdd:MTH00066 587 FLITLLLMLILL 598
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
27-595 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 673.97 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 27 MKTKTAVKMAFFITLIPLIMFIHLGIESTTTNFNWSNTSTFNINMSFKFDQYSMMFMPIALYVTWSILEFTYWYMAMDPY 106
Cdd:MTH00211 29 LHIKKAVKLSFFISLIPLLIFLDQGLETILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPN 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 107 TTKFFKYLLIFLVAMMILVTANNMFQLFIGWEGVGIMSFLLIGWWRGRTEANVSALQAIIYNRTGDIGLMLTMSWLATNM 186
Cdd:MTH00211 109 INRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIGLLLSMVWLLLNL 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 187 NTWELQQMFSFtQPTPLLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILATNNSA 266
Cdd:MTH00211 189 NSWEISQLFIL-NLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLI 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 267 LSICLCLGAITALFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGLNQPQLAFLHIAMHAFFKAMLFLCSGSIIHSLNNE 346
Cdd:MTH00211 268 LGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNE 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 347 QDIRKMGGLHKSMPITSSCLTIGNMALMGMPFMTGFYSKDIIIETMNTSYLNAWALLLTLIATLLTATYSLRITTFVQMG 426
Cdd:MTH00211 348 QDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGG 427
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 427 LPRYHSTALPNENNPEIIKPITRLAVGSIIAGLIISLNITPLKIPPTTMPTQIKIAALTVTILGLLMALELamMTNKMPM 506
Cdd:MTH00211 428 YPRFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEKPEILSLPFLLKLMPLLVTIVGLLLGLEL--VNLTHKQ 505
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 507 KPSNIHNLSNLSIHFNTLTHRSFPMASLKFNQNIATHLMDLSWYEKIGPKGLINSQITPIKFTSLSQKGLIKMYMTSFIL 586
Cdd:MTH00211 506 LKTSTLSFSNMLGYYPPIIHRLLPKLSLKWGQTLSTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSYLALLLL 585
|
....*....
gi 84488630 587 SIMLMMIIM 595
Cdd:MTH00211 586 SLLLILLLF 594
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
38-594 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 563.44 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 38 FITLIPLIMFIHLGIESTTTNF-NWSNTSTFNINMSFKFDQYSMMFMPIALYVTWSILEFTYWYMAMDPYTTKFFKYLLI 116
Cdd:MTH00208 67 FLSLINLLIWILLGCPNINISLsNWLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLII 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 117 FLVAMMILVTANNMFQLFIGWEGVGIMSFLLIGWWRGRTEANVSALQAIIYNRTGDIGLMLTMSWLATNMNTWELQQMFS 196
Cdd:MTH00208 147 FLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSWNLNEILS 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 197 FTQPTPLLPLLG---LILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILATNNSALSICLCL 273
Cdd:MTH00208 227 LNNSNSFLINILlfgILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLSLCLIL 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 274 GAITALFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGLNQPQLAFLHIAMHAFFKAMLFLCSGSIIHSLNNEQDIRKMG 353
Cdd:MTH00208 307 GSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMG 386
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 354 GLHKSMPITSSCLTIGNMALMGMPFMTGFYSKDIIIETMNTSYLNAWALLLTLIATLLTATYSLRITTFVQMGLPRYHST 433
Cdd:MTH00208 387 GLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPL 466
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 434 ALPNENNPEIIKPITRLAVGSIIAGLIISLNITPLkiPPTTMPTQIKIAALTVTILGLLMALELAMMTNKMPmKPSNIHN 513
Cdd:MTH00208 467 SPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNL--PPLTLPLILKSLPLIVTIIGAAFSFSFLLSLSSNP-INSNFFS 543
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 514 LSNLSIHFNTLTHRSFPMASLKFNQNIATHLMDLSWYEKIGPKGLINSQITPIKFTSLSQKGLIKMYMTSFILSIMLMMI 593
Cdd:MTH00208 544 FLSNQWFFVNISHSIIISFSFFTSLFGSTRTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYIKQYLLSSTLLFLLILT 623
|
.
gi 84488630 594 I 594
Cdd:MTH00208 624 L 624
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
36-594 |
3.07e-130 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 394.52 E-value: 3.07e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 36 AFFITLIPLIMFIHLGI--------ESTTTNFNWSNTSTFNINMSFKFDQYSMMFMPIALYVTWSILEFTYWYMAMDPYT 107
Cdd:COG1009 31 GWLAALAPLAAFVLSLLlfpavlggEVVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGL 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 108 TKFFKYLLIFLVAMMILVTANNMFQLFIGWEGVGIMSFLLIGWWRGRTEANVSALQAIIYNRTGDIGLMLTMSWLATNMN 187
Cdd:COG1009 111 ARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAG 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 188 TWELQQMFSFTQPTPLLPLLGLIL-----AATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILAT 262
Cdd:COG1009 191 TLNFSELLAAAPTILSSPLLTLILlllllGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFAL 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 263 NNSALSICLCLGAITALFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGLNQPQLAFLHIAMHAFFKAMLFLCSGSIIHS 342
Cdd:COG1009 271 SPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHA 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 343 LnNEQDIRKMGGLHKSMPITSSCLTIGNMALMGMPFMTGFYSKDIIIE-TMNTSYLNAWALLLTLIATLLTATYSLRITT 421
Cdd:COG1009 351 T-GTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFLTAFYSFRLFF 429
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 422 FVQMGLPRYHSTALPNENNPEIIKPITRLAVGSIIAGLIISLNITPLkIPPTTMPTQ---------IKIAALTVTILGLL 492
Cdd:COG1009 430 LVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLLEGL-LAPAAVLGGelhlahgllLNALPLLLSLLGIA 508
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 493 MALeLAMMTNKMPMKPSNIHNLSNLSIH---FNTLTHRSFpmaslkfnQNIATHLMDLSWYEKIGPKGLIN--SQITPI- 566
Cdd:COG1009 509 LGY-LLYLKRPLPALAERLKPLYRLLANkwyFDELYDALF--------VKPVRALARFLWFDRYVIDGIVNglARLTLFs 579
|
570 580
....*....|....*....|....*....
gi 84488630 567 -KFTSLSQKGLIKMYMTSFILSIMLMMII 594
Cdd:COG1009 580 gRLLRRLQTGYLQFYALTILLGVVVLLLL 608
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
36-494 |
8.65e-119 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 365.64 E-value: 8.65e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 36 AFFITLIPLIMFIHLGIESTT-TNFNWSNTSTFNINMSFKFDQYSMMFMPIALYVTWSILEFTYWYMAMDPYTTKFFKYL 114
Cdd:PRK06590 42 SALLSLVVFFDFLLGGGRAFSqTLWTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYL 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 115 LIFLVAMMILVTANNMFQLFIGWEGVGIMSFLLIGWWRGRTEANVSALQAIIYNRTGDIGLMLTMSWLATNMNTWELQQM 194
Cdd:PRK06590 122 NLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYDEV 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 195 FSFTQPTPLLPLLGLILA-------ATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILATNNSAL 267
Cdd:PRK06590 202 FAAAPQFFGLGWSALTLIclllfigAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEAL 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 268 SICLCLGAITALFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGLNQPQLAFLHIAMHAFFKAMLFLCSGSIIHSLNNEQ 347
Cdd:PRK06590 282 LFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQ 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 348 DIRKMGGLHKSMPITSSCLTIGNMALMGMPFMTGFYSKDIIIEtmnTSYLNAWALLLTLIAT--LLTATYSLRITTFVQM 425
Cdd:PRK06590 362 DIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILE---AAFANGHINLFVAGLVgaFLTAFYSFRLIFLVFH 438
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 84488630 426 GLPRyHSTALPNENNPEIIKPITRLAVGSIIAGLII------SLNITP---LKIPPTTMPTQIKIAALTVTILGLLMA 494
Cdd:PRK06590 439 GKEK-EKIHHPHESPAVMTLPLIVLAVLSVFAGALIvppflgVLPLTTelaHGEAEHHLPVWVALLPLVVALAGIALA 515
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
32-494 |
7.26e-115 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 355.05 E-value: 7.26e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 32 AVKMAFFITLIPLIMFIHLGIESTTTN--FNWSNTSTFNINMSFKFDQYSMMFMPIALYVTWSILEFTYWYMAMDPYTTK 109
Cdd:TIGR01974 36 SVGLSAALSAFVFVDFFLNGEGEAFTQslFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSR 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 110 FFKYLLIFLVAMMILVTANNMFQLFIGWEGVGIMSFLLIGWWRGRTEANVSALQAIIYNRTGDIGLMLTMSWLATNMNTW 189
Cdd:TIGR01974 116 FFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTL 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 190 ELQQMFSFTQPTPLLPLLGLI----LAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILATNNS 265
Cdd:TIGR01974 196 NFQEVFALAPGAFFSALTLIClllfIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPT 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 266 ALSICLCLGAITALFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGLNQPQLAFLHIAMHAFFKAMLFLCSGSIIHSLNN 345
Cdd:TIGR01974 276 ALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHH 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 346 EQDIRKMGGLHKSMPITSSCLTIGNMALMGMPFMTGFYSKDIIIETMNTSYLNAWALLLTLIATLLTATYSLRITTFVQM 425
Cdd:TIGR01974 356 EQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFH 435
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 84488630 426 GLPRYHSTALPNENNPEIIKPITRLAVGSIIAGLIISLNITPLK--IPPTT--------MPTQIKIAALTVTILGLLMA 494
Cdd:TIGR01974 436 GKERHEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFEFLKgvLPTSAepalehhhVPALEIWSPTAVAILGILLA 514
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
45-592 |
2.55e-109 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 340.52 E-value: 2.55e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 45 IMFIHLGIESTTTNF---NWSNTSTFNINMSFKFDQYSMMFMPIALYVTWSILEFTYWYMAMDPYTTKFFKYLLIFLVAM 121
Cdd:MTH00020 45 LIFYEILFNSSTTYIklwRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLM 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 122 MILVTANNMFQLFIGWEGVGIMSFLLIGWWRGRTEANVSALQAIIYNRTGDIGLMLTMSWLATNMNTWELQQMF----SF 197
Cdd:MTH00020 125 VVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVFnmvvSA 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 198 TQPTPLLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILATNNSALSICLCLGAIT 277
Cdd:MTH00020 205 PSSDITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLT 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 278 ALFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGLNQPQLAFLHIAMHAFFKAMLFLCSGSIIHSLNNEQDIRKMGGLHK 357
Cdd:MTH00020 285 VFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLIS 364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 358 SMPITSSCLTIGNMALMGMPFMTGFYSKDIIIETMNTSYLNAWALLLTLIATLLTATYSLRIT--TFVQMGLPRYHSTAL 435
Cdd:MTH00020 365 FLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIylTFLSNTNLKKAVFFH 444
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 436 PNENNPEIIKPITRLAVGSIIAGLIISLNITPLKI-PPTTMPTQIKIAALTVTILGLLMALELAMMTNKMPMKPSNIHNL 514
Cdd:MTH00020 445 LHEGDWNLLLPLGILALGSIFVGYLAKEMIWSFQItLPPIVPLSIKLLPVFLSLGGIGLVIILYFYSSKTFRVPFSFIGR 524
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 515 SNLSI-----HFNTLTHRSFPMASLKFNQNIATHLMDLSWYEKIGPKGLINSQITPIKFTSLSQKGLIKMYMTSFILSIM 589
Cdd:MTH00020 525 NSYTFlgsawQFNYILNYFLIKKIWKGGHLISYRTIDKGVLELVGPKGISNFLIILTQGLSSLQSGLVFNYALVILIGVA 604
|
...
gi 84488630 590 LMM 592
Cdd:MTH00020 605 IFI 607
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
61-594 |
1.14e-104 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 328.89 E-value: 1.14e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 61 WSNTSTFNINMSFKFDQYSMMFMPIALYVTWSILEFTYWYMAMDPYTTKFFKYLLIFLVAMMILVTANNMFQLFIGWEGV 140
Cdd:MTH00210 64 WFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGV 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 141 GIMSFLLIGWWRGRTEANVSALQAIIYNRTGDIGLMLTMSWLATNMNTWELQQMFSFTQPTPLLPLLGLI-----LAATG 215
Cdd:MTH00210 144 GLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLLVTNINKESLTIIclllfIGAVG 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 216 KSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILATNNSALSICLCLGAITALFSAFCAITQNDIKKII 295
Cdd:MTH00210 224 KSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFAATVGVVQNDLKKVI 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 296 AFSTSSQLGLMMVTVGLNQPQLAFLHIAMHAFFKAMLFLCSGSIIHSLNNEQDIRKMGGLHKSMPITSSCLTIGNMALMG 375
Cdd:MTH00210 304 AYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMG 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 376 MPFMTGFYSKDIIIETMNTSYLNAWALLLTLIATLLTATYSLRITTFVQMGLPRYHSTALPN--ENNPEIIKPITRLAVG 453
Cdd:MTH00210 384 FPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEVFIGvhESSWNITFPLLLLAFG 463
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 454 SIIAGLIISLNITPLKIPPtTMPTQIKIAALTVTILGLLMALELAMMTNKMPMKPSN---------IHNLSNLSIHFNTL 524
Cdd:MTH00210 464 SIFVGYLGKEVVLSNVIPP-IVPNSIKMIPLLFSLLGALLAFVIYNSMVFLIKISRRgvsirlyhvIYTFLNSAWQFNYV 542
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 525 THRSFPMASLKFNQNIATHLMDLSWYEKIGPKGLINSQITPIKFTSLSQKGLIKMYmtsfilsiMLMMII 594
Cdd:MTH00210 543 INHFIVKNIWKFGHLITYRIIDRGLLEIIGPRGISKVLIKLTQKISNLQSGMVFNY--------ALIMII 604
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
37-595 |
1.58e-100 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 316.70 E-value: 1.58e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 37 FFITLIPLIMFIHLGIESTTTNFNWS--NTSTFNINMSFKFDQYSMMFMPIALYVTWSILEFTYWYMAMDPYTTKFFKYL 114
Cdd:MTH00165 12 FFLSLILFFLGLYFLLNDYSLFIEWElfSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNINRFIYLV 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 115 LIFLVAMMILVTANNMFQLFIGWEGVGIMSFLLIGWWRGRTEANvSALQAIIYNRTGDIGLMLTMSWLaTNMNTWELQQM 194
Cdd:MTH00165 92 LLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYN-AGMLTALSNRIGDVAILLSIAWM-MNFGSWNFIFY 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 195 FSFTQPTPLLPLLGL--ILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILATNNSaLSICLC 272
Cdd:MTH00165 170 LDFMKNSFEMLLIGLliMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSSFF-SKFLLL 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 273 LGAITALFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGLNQPQLAFLHIAMHAFFKAMLFLCSGSIIHSLNNEQDIRKM 352
Cdd:MTH00165 249 ISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNSQDIRFM 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 353 GGLHKSMPITSSCLTIGNMALMGMPFMTGFYSKDIIIETMNTSYLNAWALLLTLIATLLTATYSLRITTFVQMGLPRYHS 432
Cdd:MTH00165 329 GGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSGDFNLKS 408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 433 TALPNENNPEIIKPITRLAVGSIIAGLIISLNITPLKIPPtTMPTQIKIAALTVTILGLLMALELAMMTNKMPMKPSNIH 512
Cdd:MTH00165 409 LNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMI-CLPFYLKLLTLFVILLGGWLGYELSLMSLSYNLKSLKNY 487
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 513 NLSNLSIH---FNTLTHRSFPMASLKFNQNIaTHLMDLSWYEKIGPKGLINSQITPIKFTSLSQKGLIKMYMTSFILSIM 589
Cdd:MTH00165 488 KLSSFLGSmwfMPFLSTYGISYYPLNLGSLS-LKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLSFLLWMI 566
|
....*.
gi 84488630 590 LMMIIM 595
Cdd:MTH00165 567 ILLLLF 572
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
35-595 |
1.62e-97 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 308.31 E-value: 1.62e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 35 MAFFITLIPLIMFIHLGIESTTTNFNWS--NTSTFNINMSFKFDQYSMMFMPIALYVTWSILEFTYWYMAMDPYTTKFFK 112
Cdd:MTH00151 10 LLFSYSVFLFPLLGYFGLNGISLIFEWEllSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMW 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 113 YLLIFLVAMMILVTANNMFQLFIGWEGVGIMSFLLIGWWRGrTEANVSALQAIIYNRTGDiGLMLTMSWLATNMNTWELQ 192
Cdd:MTH00151 90 LVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQN-KKSLSAGMLTALTNRIGD-VLILLSIALLVLLGHWSIL 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 193 QMFSFtqPTPLLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILATNNSALSICLC 272
Cdd:MTH00151 168 SMWDF--KLSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFLLF 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 273 LGAITALFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGLNQPQLAFLHIAMHAFFKAMLFLCSGSIIHSLNNEQDIRKM 352
Cdd:MTH00151 246 ISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRLL 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 353 GGLHKSMPITSSCLTIGNMALMGMPFMTGFYSKDIIIETMNTSYLNAWALLLTLIATLLTATYSLRITTFVQMGLPRYHS 432
Cdd:MTH00151 326 GSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSSS 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 433 TALPNENNPEIIKPITRLAVGSIIAGLIISlNITPLKIPPTTMPTQIKIAALTVTILGLLMALELAMMTNKmpMKPSNIH 512
Cdd:MTH00151 406 LSSKSDEDFYVSLPMLLLSLGALIGGKLLQ-SLFEGFSEEFFLPSYLKLLIGFVILLGLFLSFGFWDSGFS--SSKMVKL 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 513 NLSNLSIHFNTLTHRSFPMASLKFNQNIATHLMDLSWYEKIGPKGLINSQitpIKFTSLSQKGLIKMYMTSFILSIMLMM 592
Cdd:MTH00151 483 SFFFSSMWFLSPLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKAN---KSFSVLNESWPVKWFNFFIGLILLLVL 559
|
...
gi 84488630 593 IIM 595
Cdd:MTH00151 560 FLV 562
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
30-595 |
5.19e-93 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 296.94 E-value: 5.19e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 30 KTAVKMAFFITLIPLIMFIHLGIESTTTNFNWS--NTSTFNINMSFKFDQYSMMFMPIALYVTWSILEFTYWYMAMDPYT 107
Cdd:MTH00209 3 KMQMFSLMLLFLFSFLMFVIFMWFQKIVILEWEllSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFK 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 108 TKFFKYLLIFLVAMMILVTANNMFQLFIGWEGVGIMSFLLIGWWRGrTEANVSALQAIIYNRTGDIGLMLTMSWlATNMN 187
Cdd:MTH00209 83 KRFILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQN-SKSLSAGMLTALTNRVGDALLILSIAW-MLMHG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 188 TWELQQMfSFTQPTPLLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILATNNSAL 267
Cdd:MTH00209 161 NWNIFYL-NFNSNLGSVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFS 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 268 SICLCLGAITALFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGLNQPQLAFLHIAMHAFFKAMLFLCSGSIIHSLNNEQ 347
Cdd:MTH00209 240 MSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQ 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 348 DIRKMGGLHKSMPITSSCLTIGNMALMGMPFMTGFYSKDIIIETMNTSYLNAWALLLTLIATLLTATYSLRITTFVQMGL 427
Cdd:MTH00209 320 DIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGP 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 428 PRYHSTALPNENNPEIIKPITRLAVGSIIAGLIISLNITPLKIPPtTMPTQIKIAALTVTILGLLMALELaMMTNKMPMK 507
Cdd:MTH00209 400 NSSKSLNSSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNSV-VLPWFLKLLPIMLILFGVLLMYMV-LKKNFFLIK 477
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 508 PSNIHNLSNLSIHFNTLTHRSFPMASLKFNQNiATHLMDLSWYEKIGPKGLINSQITPIKFTSLSQKGLIKMYMTSFILS 587
Cdd:MTH00209 478 GYKVNYFLSQMWFLPDLSSQPVNKFTMKLSKT-MLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMMLI 556
|
....*...
gi 84488630 588 IMLMMIIM 595
Cdd:MTH00209 557 LLGVILFM 564
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
51-389 |
3.78e-86 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 281.91 E-value: 3.78e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 51 GIESTTTNFNWSNTSTFNINMSFKFDQYSMMFMPIALYVTWSILEFTYWYMAMDPYTTKFFKYLLIFLVAMMILVTANNM 130
Cdd:PRK07376 65 GHEPYERLFEWASAGDFHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNL 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 131 FQLFIGWEGVGIMSFLLIGWWRGRTEANVSALQAIIYNRTGDIGLMLTMSWLATNMNTWELQQMFSFTQPTPLLPLLGLI 210
Cdd:PRK07376 145 VQIYVFWELVGMCSYLLVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGW 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 211 LAAT----------GKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILATNNSALSICLCLGAITALF 280
Cdd:PRK07376 225 LALLlcilvflgpmAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFL 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 281 SAFCAITQNDIKKIIAFSTSSQLGLMMVTVGLNQPQLAFLHIAMHAFFKAMLFLCSGSIIHSLNN--------EQDIRKM 352
Cdd:PRK07376 305 GASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQDMRLM 384
|
330 340 350
....*....|....*....|....*....|....*..
gi 84488630 353 GGLHKSMPITSSCLTIGNMALMGMPFMTGFYSKDIII 389
Cdd:PRK07376 385 GGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEIL 421
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
25-595 |
6.29e-86 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 278.57 E-value: 6.29e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 25 PIMKTKTAVKMAFFITLIPLIMFIHLGIESTTTNFNWS--NTSTFNINMSFKFDQYSMMFMPIALYVTWSILEFTYWYMA 102
Cdd:MTH00207 3 MFKPSSIASYLLWFMSILMFPLSLYLMMCNKTILIEWEifTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQ 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 103 MDPYTTKFFKYLLIFLVAMMILVTANNMFQLFIGWEGVGIMSFLLIGWWRGRTEANVSALQAIIyNRTGDIGLMLTMSWl 182
Cdd:MTH00207 83 EDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALT-NRIGDVMLLLSIGW- 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 183 ATNMNTWELQQMFSftQPTPLLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILAT 262
Cdd:MTH00207 161 TLNQGHWSITNMWQ--TDMNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSS 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 263 NNSALSICLCLGAITALFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGLNQPQLAFLHIAMHAFFKAMLFLCSGSIIHS 342
Cdd:MTH00207 239 TYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHS 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 343 LNNEQDIRKMGGLHKSMPITSSCLTIGNMALMGMPFMTGFYSKDIIIETMNTSYLNAWALLLTLIATLLTATYSLRITTF 422
Cdd:MTH00207 319 HHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLA 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 423 VQMGLPRYHSTALPNENNPEIIKPITRLAVGSIIAGLIISLNITPLKIPPtTMPTQIKIAALTVTILGLLMALELAM--M 500
Cdd:MTH00207 399 VLWSPNSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEP-ILPLQYKLLPLLVVTLGALLAWLFTTpnI 477
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 501 TNKMPMKPSNIHNLSNLSIHFNTLTHRSFPMASLKFNQNIATHLMDLSWYEKIGPKGLINSqitpIKFTSLSQKGLIKMY 580
Cdd:MTH00207 478 TKTPLLINNPLSHFASCLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKM----FSRSSNNVMKLQKNI 553
|
570
....*....|....*
gi 84488630 581 MTSFILSIMLMMIIM 595
Cdd:MTH00207 554 PNNYLMMSFVLLTII 568
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
59-585 |
1.37e-81 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 269.52 E-value: 1.37e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 59 FNWSNTSTFNINMSFKFDQYSMMFMPIALYVTWSILEFTYWYMAMDPYTTKFFKYLLIFLVAMMILVTANNMFQLFIGWE 138
Cdd:MTH00032 62 YKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 139 GVGIMSFLLIGWWRGRTEANVSALQAIIYNRTGDIGLMLTMSWLATNMNTWELQQM-------------------FSFTQ 199
Cdd:MTH00032 142 GVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFnggsvgsgimdrgyygggaYESPL 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 200 PTPLLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILATNNSALSICLCLGAITAL 279
Cdd:MTH00032 222 APFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGALTAF 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 280 FSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGLNQPQ-LAFLHIAMHAFFKAMLFLCSGSIIHSLN-NEQDIRKMGGLHK 357
Cdd:MTH00032 302 FAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGSHnVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGGLIH 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 358 SMPITSSCLTIGNMALMGMPFMTGFYSKDIIIE------------------------------------TMNTSYLNAWA 401
Cdd:MTH00032 382 SIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILEltysgrnmgipfgssllkiqgdigikkddrgsiggpEGYPSRGSAFA 461
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 402 LLLTLIATLLTATYSLRITTFVQMGLPRYHSTALPNEN----NPEIIKPITRLAVGSIIAGLIISL----NITPLKIPP- 472
Cdd:MTH00032 462 FWLGTVAALLTAFYSIRLVYITFIISPNSPKESLISSHinivDKRVLTVLSLLCFGAIFVGYLIQDiligDIEHPIVPPl 541
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 473 -TTMPTQIKIAALTVTILGLLMALELAMMTNKMPMKPS---NIHNLSNLSIHFNTLTHRSFPMASLKFNQNIATHLMDLS 548
Cdd:MTH00032 542 iKVMPTLMGLFGMGLCLWAQKGTREGELYWGFDPIGPSfllSIYSFLGGAWQGDHLINKLVAIPLFSFGHWGIYKTLDRG 621
|
570 580 590
....*....|....*....|....*....|....*..
gi 84488630 549 WYEKIGPKGLINSQITPIKFTSLSQKGLIKMYMTSFI 585
Cdd:MTH00032 622 WLELFGPQGISTIALRVSQFISNLQSGVISRYALVLL 658
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
100-389 |
9.89e-62 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 217.45 E-value: 9.89e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 100 YMAMDPYTTKFFKYLLIFLVAMMILVTANNMFQLFIGWEGVGIMSFLLIGWWRGRTEAnVSALQ-AIIYNRTGDIGLMLT 178
Cdd:CHL00025 114 YMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIA-ANACQkAFVTNRVGDFGLLLG 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 179 MSWLATNMNTWELQQMFSFTQPTPLLPLLGLILA----------ATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVA 248
Cdd:CHL00025 193 ILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFAtlcafllflgPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAA 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 249 GIFLLIRVHPILATNNSALSICLCLGAITALFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGLNQPQLAFLHIAMHAFF 328
Cdd:CHL00025 273 GIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYS 352
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 84488630 329 KAMLFLCSGSIIHSL--------NNEQDIRKMGGLHKSMPITSSCLTIGNMALMGMPFMTGFYSKDIII 389
Cdd:CHL00025 353 KALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEIL 421
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
36-391 |
1.71e-59 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 211.70 E-value: 1.71e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 36 AFFITLIPLIMFIHL--------GIESTTTNFNWsnTSTFNINMSFKFDQYSMMFmpiALYVT---WSILEFTYWYMAMD 104
Cdd:PRK12647 17 GWLLALLPLALFLYFlsfipeiaAGETVRGGYAW--VPSLGVNLSFLLDGLSLTF---ALLITgigTLIVLYAGGYLKGH 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 105 PYTTKFFKYLLIFLVAMMILVTANNMFQLFIGWEGVGIMSFLLIGWWRGRTEANVSALQAIIYNRTGDIGLM--LTMSWL 182
Cdd:PRK12647 92 PDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLagLILLGN 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 183 ATNmnTWELQQMFSF-----TQPTPLLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVH 257
Cdd:PRK12647 172 VTG--TYSLSELLASgdvirEHPLYLAILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLN 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 258 PILATNNSALSICLCLGAITALFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGLNQP---QLAFLHIAMHAFFKAMLFL 334
Cdd:PRK12647 250 PVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSElaiKAAVLFLVAHSLYKGALFM 329
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 84488630 335 CSGSIIHSLNNeQDIRKMGGLHKSMPITSSCLTIGNMALMGMPFMTGFYSKDIIIET 391
Cdd:PRK12647 330 VAGIIDHETGT-RDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEA 385
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
127-390 |
4.81e-54 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 185.59 E-value: 4.81e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 127 ANNMFQLFIGWEGVGIMSFLLIGWWRGRTEANVSALQAIIYNRTGDIGLMLTMSWLATNMNTWELQQMFSFTQPTPLLPL 206
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 207 LGLIL-----AATGKSAQFGLHPWLPAA-MEGPTPVSALLhSSTMVVAGIFLLIRVHPILAT-NNSALSICLCLGAITAL 279
Cdd:pfam00361 81 LLLLFllilvGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPsSPFIQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 280 FSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGLNQP---QLAFLHIAMHAFFKAMLFLCSGSIIHSLNNEQDIRKMGGLH 356
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIygiQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270
....*....|....*....|....*....|....
gi 84488630 357 KSMPITSSCLTIGNMALMGMPFMTGFYSKDIIIE 390
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
35-397 |
1.61e-53 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 195.45 E-value: 1.61e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 35 MAFFITLIPLIMFIH-LGIESTTTN-------FNWsnTSTFNINMSFKFDQYSMMFMPIALYVTWSILEFTYWYMAMDPY 106
Cdd:TIGR00940 27 IGWFVLAIPLVCFLYtLGLYPYTASggvlhytIDW--VPELGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEP 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 107 TTKFFKYLLIFLVAMMILVTANNMFQLFIGWEGVGIMSFLLIGWWRGRTEANVSALQAIIYNRTGDIGLMLTMSWLATNM 186
Cdd:TIGR00940 105 LPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKIT 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 187 NTWELQQMFS-----FTQPTPLLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILA 261
Cdd:TIGR00940 185 GSFSIDAVIAsadaiRNSPLFGTAMVLVLLGAFTKSAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFA 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 262 TNNSALSICLCLGAITALFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGLNQPQL----------------AFLHIAMH 325
Cdd:TIGR00940 265 GTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGLGSPSYhyqgddskiyalaavaAVFHLINH 344
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 84488630 326 AFFKAMLFLCSGSIIHSlNNEQDIRKMGGLHKSMPITSSCLTIGNMALMGMPFMTGFYSKDIIIETMNTSYL 397
Cdd:TIGR00940 345 ATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAEAITAHL 415
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
56-392 |
3.11e-53 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 195.91 E-value: 3.11e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 56 TTNFNWsnTSTFNINMSFKFDQYSMMFMPIALYVTWSILEFTYWYMAMD-PYTTKFFKYLLIFLVAMMILVTANNMFQLF 134
Cdd:PRK12644 55 TEVVPW--IPSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDePRLGRFAAELVAFAGAMFGLVTSDNLLLLY 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 135 IGWEGVGIMSFLLIGWWRGRTEANVSALQAIIYNRTGdiGL-MLT-MSWLATNMNTWELQQMFSF--TQPTPLLPLLGLI 210
Cdd:PRK12644 133 VFWELTTVLSFLLIGHYAERAASRRAALQALLVTTAG--GLaMLVgIIILGQAAGTYRLSELLADppTGPAVSVAVVLIL 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 211 LAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILATNNSALSICLCLGAITALFSAFCAITQND 290
Cdd:PRK12644 211 VGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRALRQHD 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 291 IKKIIAFSTSSQLGLMMVTVGLNQPQLAFLHIAM---HAFFKAMLFLCSGSIIHSlNNEQDIRKMGGLHKSMPITSSCLT 367
Cdd:PRK12644 291 LKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMllaHALFKAALFLVVGIIDHS-TGTRDIRKLSGLGRRQPVLAVVAA 369
|
330 340
....*....|....*....|....*
gi 84488630 368 IGNMALMGMPFMTGFYSKDIIIETM 392
Cdd:PRK12644 370 LAAASMAGLPPLLGFVAKEAALEAV 394
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
25-391 |
5.40e-51 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 188.11 E-value: 5.40e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 25 PIMKTKTAVKMAFFITLIPLIMFIHLG------IESTTTNFNWSNTSTFNINMSFKFDQYSMMFMPIALYVTWSILEFTY 98
Cdd:PRK12649 22 PVLEKVLKQRIGWFAAAIAFTSFALIAqvapevIHGTIITGSISWLPSAGVEFSIYADGLAVLIGLIASGIGVIIMSYSN 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 99 WYMAMDPYTTKFFKYLLIFLVAMMILVTANNMFQLFIGWEGVGIMSFLLIGWWRGRTEANVSALQAIIYNRTGDIGLMLT 178
Cdd:PRK12649 102 GYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAG 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 179 MSWLATNMNTWELQQMFSFTQPTPL--------LPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGI 250
Cdd:PRK12649 182 FLLLHVITGTYDIATILQDSELIENikghplflITLILIFIGAAAKSAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGV 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 251 FLLIRVHPILATNNSALSICLCLGAITALFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGL---NQPQLAF----LHIA 323
Cdd:PRK12649 262 YLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYttyHEPGLGVaaatFHLL 341
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 84488630 324 MHAFFKAMLFLCSGSIIHSLNNeQDIRKMGGLHKSMPITSSCLTIGNMALMGMPFMTGFYSKDIIIET 391
Cdd:PRK12649 342 NHATFKACLFLVAGIVAHEAAT-RDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEMFYET 408
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
69-385 |
6.48e-51 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 188.86 E-value: 6.48e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 69 INMSFKFDQYSMMFMPIALYVTWSILEFTYWYMAMDPYTTKFFKYLLIFLVAMMILVTANNMFQLFIGWEGVGIMSFLLI 148
Cdd:PRK12648 68 LNLSLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 149 GWWRGRTEANVSALQAIIYNRTGDIGLMLTMSWLATNMNTWELQQMFSFTQP-----TPLLPLLGLILAATGKSAQFGLH 223
Cdd:PRK12648 148 GYWHHRADARRGARMALTVTGAGGLALLAGVLLLGHIVGSYDLDVVLAAGDLirahpLYPPALVLILLGAFTKSAQFPFH 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 224 PWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILATNNSALSICLCLGAITALFSAFCAITQNDIKKIIAFSTSSQL 303
Cdd:PRK12648 228 FWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYSTISHL 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 304 GLMMVTVGLNQPQ---LAFLHIAMHAFFKAMLFLCSGSIIHslnnE---QDIRKMGGLHKSMPITSSCLTIGNMALMGMP 377
Cdd:PRK12648 308 GLITLLLGLGSPLaavAAIFHIINHATFKASLFMAAGIIDH----EtgtRDMRRLSGLRRLMPITATLAMVAAAAMAGVP 383
|
....*...
gi 84488630 378 FMTGFYSK 385
Cdd:PRK12648 384 LLNGFLSK 391
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
69-400 |
8.09e-50 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 186.02 E-value: 8.09e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 69 INMSFKFDQYSMMFMPIALYVTWSILEFTYWYMAMDPYTTKFFKYLLIFLVAMMILVTANNMFQLFIGWEGVGIMSFLLI 148
Cdd:PRK12650 71 VNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLI 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 149 GwwRGRTEANVSALQAIIYNRTGDIGLMLTMSWLATNMNTWELQQMFSFT-----QPTPLLPLLGLILAATGKSAQFGLH 223
Cdd:PRK12650 151 A--RSGSGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDvwaekPGLTTVVAVLIAVAAFTKSAQFPFH 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 224 PWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILATN---NSALSIClclGAITALFSAFCAITQNDIKKIIAFSTS 300
Cdd:PRK12650 229 FWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVavwNWLLIIV---GMITALMGAVFAVQKTDLKKLTAYSTV 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 301 SQLGLMMVTVGLNQP---QLAFLHIAMHAFFKAMLFLCSGSIIHSLNNeQDIRKMGGLHKSMPITSSCLTIGNMALMGMP 377
Cdd:PRK12650 306 SQLGWIVATIGVGTPfalTAAVVHTLAHALFKSSLFMLIGVVDHQAGT-RDIRRLGSLWRRMPFTFVSVTIAALSMAAVP 384
|
330 340
....*....|....*....|...
gi 84488630 378 FMTGFYSKDIIIETMNTSYLNAW 400
Cdd:PRK12650 385 PLFGFVSKEGMLTAFLEAPGGNA 407
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
65-392 |
2.19e-49 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 183.42 E-value: 2.19e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 65 STFNINMSFKFDQYSMMF-MPIALYVTWSILEFTYWYMAMDPYTTKFFKYLLIFLVAMMILVTANNMFQLFIGWEGVGIM 143
Cdd:PRK12646 66 KTLDINLDLRLDGLSLMFsLIISLIGIAVFFYATQYLSSRKDNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVS 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 144 SFLLIGWWRGRTEANVSALQAIIYNRTGD----IGLMLTMSWLATNMNTWELQQMFSFTQPTP-LLPLLGLILAATGKSA 218
Cdd:PRK12646 146 SFLLISYWYNNGDSQFGAIQSFMITVFGGlallVGFIMLYIMTGTNNITEILGQADHIKNHGLfIPMIFMFLLGAFTKSA 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 219 QFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILATNNSALSICLCLGAITALFSAFCAITQNDIKKIIAFS 298
Cdd:PRK12646 226 QFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYS 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 299 TSSQLGLMMVTVGLN-----QPQLAF------------LHIAMHAFFKAMLFLCSGSIIHSlNNEQDIRKMGGLHKSMPI 361
Cdd:PRK12646 306 TISQLGMIMAMVGIGggyaqHQQDAIasiyvfvlfaalFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQLFPK 384
|
330 340 350
....*....|....*....|....*....|.
gi 84488630 362 TSSCLTIGNMALMGMPFMTGFYSKDIIIETM 392
Cdd:PRK12646 385 MNLVMTIAALSMAGVPFLNGFLSKEMFLDAL 415
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
72-385 |
3.85e-48 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 173.79 E-value: 3.85e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 72 SFKFDQYSMMFMPIALYVTWSILEFTYWYMAMDPYTTKFFKYLLIFLVAMMILVTANNMFQLFIGWEGVGIMSFLLIGWW 151
Cdd:COG0651 71 VLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 152 RGRtEANVSALQAIIYNRTGDIGLMLTMSWLATNMNTWELQQM-FSFTQPTPLLPLLGLILAATG---KSAQFGLHPWLP 227
Cdd:COG0651 151 GTK-EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLaARLAELDPGLLLAAFALLLVGfgiKAALFPLHFWLP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 228 AAM-EGPTPVSALLhSSTMVVAGIFLLIRVHPILATNNSALS---ICLCLGAITALFSAFCAITQNDIKKIIAFSTSSQL 303
Cdd:COG0651 230 DAYpAAPSPVSALL-SGLLTKVGVYAILRVLTLLFGADPALFlgtLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQI 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 304 GLMMVTVGLNQPQL---AFLHIAMHAFFKAMLFLCSGSIIHSLnNEQDIRKMGGLHKSMPITSSCLTIGNMALMGMPFMT 380
Cdd:COG0651 309 GYILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERAT-GTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLS 387
|
....*
gi 84488630 381 GFYSK 385
Cdd:COG0651 388 GFVSK 392
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
110-392 |
2.47e-46 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 174.73 E-value: 2.47e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 110 FFKYLLIFLVAMMILVTANNMFQLFIGWEGVGIMSFLLIGWWRGRTEANVSALQAIIYNRTGDIGLMLTMSWLATNMNTW 189
Cdd:PRK12645 112 FYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 190 ELQQMFSFTQPTP-----LLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILATNN 264
Cdd:PRK12645 192 SIREMIANADEIQnsplfIPAMILILLGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQ 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 265 SALSICLCLGAITALFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGLNQPQL----------------AFLHIAMHAFF 328
Cdd:PRK12645 272 VWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIGAASLhyqgddskiyaaaitaAIFHLINHATF 351
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 84488630 329 KAMLFLCSGSIIHSLNNeQDIRKMGGLHKSMPITSSCLTIGNMALMGMPFMTGFYSKDIIIETM 392
Cdd:PRK12645 352 KGSLFMIVGIVDHETGT-RDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFESM 414
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
107-389 |
2.31e-45 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 167.46 E-value: 2.31e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 107 TTKFFKYLLIFLVAMMILVTANNMFQLFIGWEGVGIMSFLLIGWWrGRTEANVSALQAIIYNRTGDIGLMLTMSWLATNM 186
Cdd:PRK06525 112 TGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYY-QSPKALRSALKALLITHIGSLGLYLAAATLFLQT 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 187 NTWELQQMFSFTQPTPLLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVhpILATNNSA 266
Cdd:PRK06525 191 GTFALSALSGLHGSLKYLVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARA--IQSMGPIP 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 267 LSI---CLCLGAITALFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGLN--QPQLAF----LHIAMHAFFKAMLFLCSG 337
Cdd:PRK06525 269 HVIgyvGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAilGSRLALegsiAYIFNHAFAKSLFFLVAG 348
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 84488630 338 SIIHSLNNeQDIRKMGGLHKSMPITSSCLTIGNMALMGMPFMTGFYSKDIII 389
Cdd:PRK06525 349 ALSYSCGT-RLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIF 399
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
415-595 |
9.53e-45 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 156.94 E-value: 9.53e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 415 YSLRITTFVQMGLPRYHSTALPNENNPEIIKPITRLAVGSIIAGLIISLNITPlKIPPTTMPTQIKIAALTVTILGLLMA 494
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFP-KPPMMTMPLYLKLLALLVTILGLLLG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 495 LELAMMTNKMPMKP--SNIHNLSNLSIHFNTLTHRSFPMASLKFNQNIATHLmDLSWYEKIGPKGLINSQITPIKFTSLS 572
Cdd:pfam06455 80 LELSNLSNKQLKKSlnFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQI-DQGWSEKFGPQGIAKTLMTLSKIIQNS 158
|
170 180
....*....|....*....|...
gi 84488630 573 QKGLIKMYMTSFILSIMLMMIIM 595
Cdd:pfam06455 159 QKGLIKIYLLSFLLWLLLLLLLI 181
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
35-395 |
2.89e-43 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 162.39 E-value: 2.89e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 35 MAFFITLIPLIMFIHLGIESTTTNFNWSNTSTFNINMSFKFDQY--SMMFMPIALYVTWSILEFTYWYMAMDPYTTKFFK 112
Cdd:MTH00095 1 MNILIFLILFFFFFLLLFILFLPFMKLNLFFLEWDFLSLKFNFYfnSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 113 YLLIFLVAMMILVTANNMFQLFIGWEGVGIMSFLLIGWWrGRTEANVSALQAIIYNRTGDIGLMLTMSWLATNMNTWELQ 192
Cdd:MTH00095 81 VLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFY-NNWDSNSGAMNTALTNRIGDFFIFLFFSGFIFSSYYFFSF 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 193 QMFSFtqptplLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILaTNNSALSICLC 272
Cdd:MTH00095 160 SFFSS------SMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLI-LNMNVMKIMLL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 273 LGAITALFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGLNQPQLAFLHIAMHAFFKAMLFLCSGSIIHSLNNEQDIRKM 352
Cdd:MTH00095 233 IGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNY 312
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 84488630 353 GGLHKSMPITSSCLTIGNMALMGMPFMTGFYSKDIIIETMNTS 395
Cdd:MTH00095 313 SNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFN 355
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
100-384 |
5.29e-42 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 160.08 E-value: 5.29e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 100 YMAMDPYTTKFFKYLLIFLVAMMILVTANNMFQLFIGWEGVGIMSFLLIGWWRGRTEANVSALQAIIYNRTGDIGLMLTM 179
Cdd:PRK07390 112 YLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGV 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 180 SWLATNMNTWELQQMFSFTQPTPLLPLLGLILA------ATGKSAQFGLHPWLPAAMEGPTPVSaLLHSSTMVVAGIFLL 253
Cdd:PRK07390 192 VALSPLAGTLNFSDLAAWAATANLDPLTATLLGlaliagPTGKCAQFPLHLWLDEAMEGPNPAS-ILRNSVVVATGAWVL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 254 IRVHPILATNNSALSICLCLGAITALFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGLNQPQLAFLHIAMHAFFKAMLF 333
Cdd:PRK07390 271 IKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLF 350
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 84488630 334 LCSGSIIHSlNNEQDIRKMGGLHKSMPITSSCLTIGNMALMGMPFMTGFYS 384
Cdd:PRK07390 351 MSVGSIILT-TITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA 400
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
91-340 |
2.77e-32 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 130.59 E-value: 2.77e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 91 WSILEFTYWYMAMDPYTTKFFKYLLIFLVAMMILVTANNMFQLFIGWEGVGIMSFLLIGWWRGRTEANVSALQAIIYNRT 170
Cdd:PRK08168 83 WVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRPFARLAAHKKFIADRL 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 171 GDIGLM--LTMSWLATNmnTWELQQMF-----SFTQPTPLLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSS 243
Cdd:PRK08168 163 AELLLLaaAALAYLEVG--SLSLSALWahlaaQGASPSLQAAALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAG 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 244 TMVVAGiFLLIRVHPILATNNSALSICLCLGAITALFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGLNQPQLAFLHIA 323
Cdd:PRK08168 241 VVNLGG-FVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLGLYELALLHLV 319
|
250
....*....|....*..
gi 84488630 324 MHAFFKAMLFLCSGSII 340
Cdd:PRK08168 320 AHSLYKAHAFLSASEAV 336
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
93-385 |
1.90e-30 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 125.47 E-value: 1.90e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 93 ILEFTYWYMAMDPYTTKFFKYLLIFLVAMMILVTANNMFQLFIGWEGVGIMSFLLIGWWRGRTEANVSALQ--------- 163
Cdd:PRK12667 98 ILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDAVEAAIKyaligavgt 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 164 -------AIIYNRTGdiglMLTMSWLATNMNTWELQQMFSFTQPTPLLPLLGLILAA---TGKSAQFGLHPWLPAAM-EG 232
Cdd:PRK12667 178 tlyflalAFLYATFG----TLNMADLSAKIRGLSFPLTGGLAGNPPLALGVALALALwafTIKAAIFPNHFWLPDAHpAA 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 233 PTPVSALLhSSTMVVAGIFLLIRVHPILATNNSAL--------SICLCLGAITALFSAFCAITQNDIKKIIAFSTSSQLG 304
Cdd:PRK12667 254 PSPVSAML-SGLVVNVGAYAIIRFLYTIFGISPSLidfraalsPILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMG 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 305 LMMVTVGLNQP---QLAFLHIAMHAFFKAMLFLCSGSIIHSLNNeQDIRKMGGLHKSMPITSSCLTIGNMALMGMPFMTG 381
Cdd:PRK12667 333 YIFMGIGIGTQlglAAALFHIINHAIAKSLLFLASGVFIHAAGT-RDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNG 411
|
....
gi 84488630 382 FYSK 385
Cdd:PRK12667 412 FFSK 415
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
216-459 |
3.65e-30 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 124.22 E-value: 3.65e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 216 KSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRV-----HPILATNNSALSICLCLGAITALFSAFCAITQND 290
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIyftvfGGDFRFALGLGWLLAVLALLSMLVGSLAALGQDD 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 291 IKKIIAFSTSSQLGLMMVTVGLNQP---QLAFLHIAMHAFFKAMLFLCSGSIIHSLNNeQDIRKMGGLHKSMPITSSCLT 367
Cdd:PRK08375 295 VKRVLAYSTVSQMGYILLGLALLTPlalAAGLLHLLHHALMKGALFLAAGAIEVTYGT-RRLSELSGLGRRMPLTAAAFA 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 368 IGNMALMGMPFMTGFYSKDIIIETMNTSYlNAWALLLTLIATLLTATYSLRITTFVQMGLPRYHSTALPNENNPEIIKPI 447
Cdd:PRK08375 374 VASLSLIGVPPTSGFVSKWYLVVGAVEAG-QWLVLAVLLASSLLALLYFLRIWYRAFFGPPPPGSEAPKQEAPLGMLAPS 452
|
250
....*....|..
gi 84488630 448 TRLAVGSIIAGL 459
Cdd:PRK08375 453 LALALLSLLLGI 464
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
116-385 |
5.41e-28 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 118.84 E-value: 5.41e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 116 IFLVAMMILVTANNMFQLFIGWEGVGIMSFLLIgWWRGRTEANVSAlqAIIY---NRTGDIGLMLTMSWLATNMNTWELQ 192
Cdd:PRK06521 121 LFLASMVLVLLADDAFSFLVAWETMSLSSWFLV-IANHREAEIRRA--GFLYllmAHAGALAILLAFGLLARESGSYDFA 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 193 QM--FSFTQPTPLLPLLGLILAATGKSAQFGLHPWLP----AAmegPTPVSALLhSSTMVVAGIFLLIRVHPILATNNSA 266
Cdd:PRK06521 198 AMraAHLSPFWASLVFLLALFGFGAKAGLVPLHVWLPrahpAA---PSHVSALM-SGVMLKVAIYGILRVVFDLLGAPGW 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 267 LS--ICLCLGAITALFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGL-------NQPQLAFL-------HIAMHAFFKA 330
Cdd:PRK06521 274 WWgvLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLGLamvfiayGMPLLAALaltaalyHLLNHALFKS 353
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 84488630 331 MLFLCSGSIIHSLNnEQDIRKMGGLHKSMPITSSCLTIGNMALMGMPFMTGFYSK 385
Cdd:PRK06521 354 LLFLGAGAVLHATG-TRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSE 407
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
68-391 |
1.95e-27 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 115.82 E-value: 1.95e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 68 NINMSFKFDQYSMMFMPIALYVTWSILeFTYWYMAMdpyTTKFFKYLLIFLVAMMILVTANNMFQLFIGWEGVGIMSFLL 147
Cdd:PRK07234 58 NFGVTLRADALSGYFILTNALVTLAVI-FYCWESAK---TRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLL 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 148 IGWWRgRTEANVSALQAIIYNRTGdiglMLtmSWLATNMNTWELQQMFSFTQPTPLLPLLGLILAaTG---KSAQFGLHP 224
Cdd:PRK07234 134 VAYPR-TDRAIWVGLRYLFYSNVA----ML--FYLIGAVLVYQANGTFAFSGLATADPEAFALIA-LGllvKGGIFVSGL 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 225 WLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILATNNSALSIclcLGAITALFSAFCAITQNDIKKIIAFSTSSQLG 304
Cdd:PRK07234 206 WLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRI---FGVGTALLGVLFALLEKDLKRMLAFSTISQLG 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 305 LMMVTvglnqPQLA-FLHIAmHAFFKAMLFLCSGsIIHSLNNEQDIRKMGGLHKSMPitsscLTIGNMALMGMPFMTGFY 383
Cdd:PRK07234 283 FILAA-----PLVGgLYALA-HGLVKSTLFLCAG-ALPSRNFTELISQMLGIGKWIP-----LTMASFSIAGFPLLAGFV 350
|
....*...
gi 84488630 384 SKDIIIET 391
Cdd:PRK07234 351 SKVLTLKN 358
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
68-395 |
7.91e-25 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 107.98 E-value: 7.91e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 68 NINMSFKFDQYSMMFMPIALYVTWSILEFTYWYMAMD--PYTTKFFKYLLIFLVAMMILVTANNMFQLFIGWEGVGIMSF 145
Cdd:PRK06589 74 NYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINniDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTA 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 146 LLIGW-------WRGRTEANVSALQAIIYNRtgdIGLMLTMSwlATNMNTWELQQMFSFTQPTPLLPLLGLILaatGKSA 218
Cdd:PRK06589 154 FLIGHtrnnislSGGYKYLKILMISALLLFL---PAVILIYT--KTGNLDFVSGGLFSKNQSIILLLMFIYGI---AKTA 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 219 QFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRV----------HPILATNNSALSIclclGAITALFSAFCAITQ 288
Cdd:PRK06589 226 IFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKIllyifglsylQRIFAEFNWLIFI----PIVSIFYSSLKALKT 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 289 NDIKKIIAFSTSSQLGLMMVTVGLNQPQ---LAFLHIAMHAFFKAMLFLCSGSIIhSLNNEQDIRKMGGLHKSMPITSSC 365
Cdd:PRK06589 302 DNIKKILAYSTISQLSLALLSAFILTPKalgAAILHLVSHSFAKICLFYSMGSIY-SLKKEDQVDKLHGTSKSFPLISFI 380
|
330 340 350
....*....|....*....|....*....|
gi 84488630 366 LTIGNMALMGMPFMTGFYSKDIIIETMNTS 395
Cdd:PRK06589 381 ISISSLSLIGIPIFSGFISKFLILLAASEQ 410
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
30-382 |
9.45e-25 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 107.86 E-value: 9.45e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 30 KTAVKMAFFITLIPLIMFIHLgiestTTNFNWSNT-----------STFNINMSFKFDQYSMMF-------MPIALYVTW 91
Cdd:COG1008 29 RLARWVALAVSLLTLLLSLYL-----LAGFDPGTGgfqfvesypwiPSLGISYHLGVDGISLPLvlltallTPLAILASW 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 92 SileftywymAMDPYTTKFFKYLLIFLVAMMILVTANNMFQLFIGWEGVGIMSFLLIGWWrGRTEANVSALQAIIYNRTG 171
Cdd:COG1008 104 N---------EIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIW-GGERRIYAAIKFFLYTLAG 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 172 DIGLMLTMSWLATNMNTWELQqMFSFTQPTPLLPLLGLILAATG-----KSAQFGLHPWLP-AAMEGPTPVSALLhSSTM 245
Cdd:COG1008 174 SLLMLVAILALYFLAGALTFD-IAELAAAPLPLTAQLLLFLAFFiafavKVPMFPFHTWLPdAHVEAPTAGSVLL-AGVL 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 246 VVAGIFLLIRVH------------PILATnnsalsiclcLGAITALFSAFCAITQNDIKKIIAFSTSSQLGLmmVTVGLn 313
Cdd:COG1008 252 LKMGGYGLLRFAlplfpeasayfaPLLAA----------LGVIGIIYGALVALAQTDLKRLIAYSSVSHMGF--VLLGI- 318
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 84488630 314 qpqLAFLHIAM---------HAFFKAMLFLCSGSIIHSLNNeQDIRKMGGLHKSMPITSSCLTIGNMALMGMPFMTGF 382
Cdd:COG1008 319 ---FALNPLGLqgavlqmvsHGLITAALFLLVGVLYDRTHT-RDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGF 392
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
125-389 |
1.39e-24 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 108.06 E-value: 1.39e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 125 VTANNMFQLFIGWEGVGIMSFLLIgWWRGRTEANVSALQAIIYNRTGDIGLMLTMSWLATNMNTWELQQMFSFTQPTPLL 204
Cdd:PRK12668 110 VFAGDLLTLFVFWELMAFTSTFLV-WARGTKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIAGLGGTAAWL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 205 pllglilAATG---KSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHP---ILATnnsalsiclcLGAITA 278
Cdd:PRK12668 189 -------ILIGfgvNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPgteLLIY----------IGAAMA 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 279 LFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGLNQPQL---AFLHIAMHAFFKAMLFLCSGSIIHSLNnEQDIRKMGGL 355
Cdd:PRK12668 252 VYGVFFALLENDLRRLLSYHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLYRTG-TEKLTELGGL 330
|
250 260 270
....*....|....*....|....*....|....
gi 84488630 356 HKSMPITSSCLTIGNMALMGMPFMTGFYSKDIII 389
Cdd:PRK12668 331 YRSMPLTALFCLVGALSISAFPLFSGFVSKSMII 364
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
116-396 |
2.59e-24 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 107.51 E-value: 2.59e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 116 IFLVAMMILVTANNMFQLFIGWEGVGIMSFLLIGWWRGRTEANVSALQAIIYNRTGDIGLMLTMSWLATNMNTWELQqMF 195
Cdd:PRK08667 119 LFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELS-PL 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 196 SFTQPTPLLPLLGLILAATGKSAQFGLHPWLPAAMEG-PTPVSALLhSSTMVVAGIFLLIR-VHPILATNNSALSICLCL 273
Cdd:PRK08667 198 GASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPAsPSNVSALM-SGVMLKVAVYGLVRfLMDVLSPELWWGVLILLA 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 274 GAITALFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGL-------NQPQLAFL-------HIAMHAFFKAMLFLCSGSI 339
Cdd:PRK08667 277 GSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLyvifgvyGLDTLALLalggalfHSLNHALFKSLLFLTAGSV 356
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 84488630 340 IHSLNNeQDIRKMGGLHKSMPITSSCLTIGNMALMGMPFMTGFYSKDIIIETMNTSY 396
Cdd:PRK08667 357 VHATGT-RNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFFQSF 412
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
66-391 |
9.65e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 105.18 E-value: 9.65e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 66 TFNINMSFKFDQYSMMFMPIALYVTWSILEFTYWYMAMDPYTTKFFKYLLIFLVAMMILVTANNMFQLFIGWEGVGIMSF 145
Cdd:PRK08376 79 GFPIRIIWEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASY 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 146 LLIGWWRGRTEANVSALQAIIYNRTGD------IGLM------LTMSWLATNMntwelqqmfSFTQPTPLLPLLGLILAA 213
Cdd:PRK08376 159 ALVAFRNDTWEAIEAGIKYMFVGSLASsmvllgIALLygqygtLNMAYLAVKM---------SENPTVVAKIALALFIAG 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 214 TG-KSAQFGLHPWLPAAM-EGPTPVSALLHSSTmvVAGIFLLIRVHPIL---ATNNSALS-ICLCLGAITALFSAFCAIT 287
Cdd:PRK08376 230 LAmKSGAVPVHMWLPDAYpAAPSSISAMLLVIK--QAGLYALARVLFSIygpAINLATVGwVIIILGCLTMFVGVAMAVV 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 288 QNDIKKIIAFSTSSQLGLMMVTVG-----LNQPQL----------AFLHIAMHAFFKAMLFLCSGSIIHSLNNeQDIRKM 352
Cdd:PRK08376 308 QKDVKRLLAYHSVSQIGYMLLGLGvglaaLGDPAMasygeialagGIYHIVNHALYKALLFLTAGAVIYETGT-RNLNEL 386
|
330 340 350
....*....|....*....|....*....|....*....
gi 84488630 353 GGLHKSMPITSSCLTIGNMALMGMPFMTGFYSKDIIIET 391
Cdd:PRK08376 387 GGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYES 425
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
35-392 |
2.22e-23 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 103.80 E-value: 2.22e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 35 MAFFITLIPLIMFIHLGIESTTTNFNWSNTSTFNINMSFKFDQ----YSMMFMPIA--LYVTWsileFTYWYMAMDPYTT 108
Cdd:MTH00063 1 SVLLVSLLLCLLIFFLFLVGVSSSVSLNFLSFGGYSWLINFDFdyvtFGVLLMLLIcfYYSLL----YTFHYFGGSYASF 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 109 KFFKYLLIFLVAMMILVTANNMFQLFIGWEGVGIMSFLLIGWWrgrteANVSALQA----IIYNRTGDIGLMLTMSWlat 184
Cdd:MTH00063 77 LLNKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFY-----DNFLSLRAsvvtLVSSRFGDVCLFLLIGL--- 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 185 nmntwelqqMFSFTQPTPLLPLLGLILAATgKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRvHPILATNN 264
Cdd:MTH00063 149 ---------SCWGGSGSFLCCLFFFLIVFT-KSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMR-YDYLLGFS 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 265 SALSICLCLGAITALFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGLNQPQLAFLHIAMHAFFKAMLFLCSGSIIHSLN 344
Cdd:MTH00063 218 WLSIFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSG 297
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 84488630 345 NEQDIRKM--GGLHKSMPITSSCLTIgnMALMGMPFMTGFYSKDIIIETM 392
Cdd:MTH00063 298 GSQSSNCVysSILYGSWNLFYLFLLV--LGLSGVPFIGVFFSKHFLLSSF 345
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
112-397 |
3.83e-22 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 99.84 E-value: 3.83e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 112 KYLLIFLVAMMI---LVTANNMFQLFIGWEGVGIMSFLLIGWWRGRtEANVSALQAIIYNRTGD----IGLMLTMSWLAT 184
Cdd:PRK08377 109 KYAMLFLLLMLGatgMIATGDIFNLFVFMEITAITAYALTAYNKTG-EAAEASMKYIVLGGIGSsfflIGVALIYGATGT 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 185 nMNTWELQQMFSFTQPTPLLPLLGLILAATGKSA-QFGLHPWLPAAMEG-PTPVSALLhSSTMVVAGIFLLIRVHPILAT 262
Cdd:PRK08377 188 -LNMAHIAQLAGTIDPTVAQVGLALLIFGLAVEAeLFPLNAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQN 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 263 NN---SALSICLCLGAITALFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGLNQP---QLAFLHIAMHAFFKAMLFLCS 336
Cdd:PRK08377 266 ANgwsSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQagvDAGVFHMINHAIVKALLFLAV 345
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 84488630 337 GSIIHSLNNEQdIRKMGGLHKSMPITSSCLTIGNMALMGMPFMTGFYSK-DIIIETMNTSYL 397
Cdd:PRK08377 346 GYVGITLGGTE-IEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKfRIILAGLSAGYT 406
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
25-389 |
1.88e-21 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 97.70 E-value: 1.88e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 25 PIMKTKTAVKMAFFITLIPLIMFIHLGIESTTTNFNWSNT------STFNINMSFKFDQYSMMFMPIALYVTwsILEFTY 98
Cdd:TIGR01972 19 PSNKDGKARWIALVVALATLLLSLLLLFQFDPTGSGFQFTedipwiPALGISYHLGVDGISLLLVLLTALLT--LLAILA 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 99 WYMAMDPYTTKFFKYLLIFLVAMMILVTANNMFQLFIGWEGVGIMSFLLIGWWrGRTEANVSALQAIIYNRTGDIGL--- 175
Cdd:TIGR01972 97 SWESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW-GGPNRIYAAMKFFLYTLAGSLLMlla 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 176 MLTMSWLA---TNMNTWELQQMFSFTQPTPLLPLLGlilAATGKSAQFGLHPWLPAAM-EGPTPVSALLHSSTMVVAGIF 251
Cdd:TIGR01972 176 ILGLYFLGggtFDLLELLNLPLPFGVQTWLFLAFFI---AFAVKVPLFPLHTWLPDAHvEAPTAGSVILAGVLLKMGTYG 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 252 LLIRVHPIL-ATNNSALSICLCLGAITALFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGLNQP---QLAFLHIAMHAF 327
Cdd:TIGR01972 253 FLRFNLPLFpDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNElgiSGAVFQMISHGL 332
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 84488630 328 FKAMLFLCSGsIIHSLNNEQDIRKMGGLHKSMPITSSCLTIGNMALMGMPFMTGFYSKDIII 389
Cdd:TIGR01972 333 ITAALFLLVG-VLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLIL 393
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
29-391 |
1.89e-21 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 98.53 E-value: 1.89e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 29 TKTAVKMAFFITLIPLI--MFIHLGIESTTTNFNWSNTSTFNINmsFKFDQYSMMFMPIALYVTWSILEF-TYWYMAMDP 105
Cdd:PRK08668 21 KKINEKIGVIGNALPLLflIKLYFTLKVGTGEKLTLFFGGFKLT--FTLTHLSWFFAMISLLVIFSVAFFmVSEKTKNDA 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 106 YTTKFfkYLLIFLVAMMILvTANNMFQLFIGWEGVGIMSFLLI--GWWRGRTEANVSALQAIIYNRTGDIGLMLTMSWLA 183
Cdd:PRK08668 99 YFNMF--ALMSLAGVLGVF-LANDLLTLYIFWEIMTFSSFMMVpmGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAKTG 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 184 TnMNTWELQQMFSFTQPTPLLPLLGLILAATG--KSAQFGLHPWLPAAM-EGPTPVSALLhSSTMVVAGIFLLIRVHPIL 260
Cdd:PRK08668 176 T-FDFADISQGLINDTSTGFALIVFLFLLAFGvaKAGIFPLHVWAPDAYsEAPQSFSAVL-SGQLSKLGAYGFLLVLYVL 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 261 ATNNSALS------------ICLCLGAITALFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGLNQP---QLAFLHIAMH 325
Cdd:PRK08668 254 PGTKLFSEfgtyrgvplfnyILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSlgfAGGLFHVFNH 333
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 84488630 326 AFFKAMLFLCSGSIIHSlNNEQDIRKMGGLHKSMPITSSCLTIGNMALMGMPFMTGFYSKDIIIET 391
Cdd:PRK08668 334 ALFKGLFFLIFAAVIYR-TGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEA 398
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
220-391 |
1.05e-19 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 92.30 E-value: 1.05e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 220 FGLHPWLP-AAMEGPTPVSALLHSSTMVVAgIFLLIRVHPILATNNSAL---SICLCLGAITALFSAFCAITQNDIKKII 295
Cdd:PRK06458 231 FPMHAWLPdAHSEAPSPVSALLSGVLLNVA-LYAVLRYYILIDAAIGSDfpgRLLLIFGLLSVLVAAFFLLRQRDIKRLF 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 296 AFSTSSQLGLMMVTVGLNQPqLAF----LHIAMHAFFKAMLFLCSGSIIHSLNnEQDIRKMGGLHKSMPITSSCLTIGNM 371
Cdd:PRK06458 310 AYSSIEHMGLIAFALGIGGP-LGIfaalLHMLNHSLTKSAIFFASGNVLQKYG-TRDINVIRGLLKVSPLTGWGLMLGAL 387
|
170 180
....*....|....*....|
gi 84488630 372 ALMGMPFMTGFYSKDIIIET 391
Cdd:PRK06458 388 AIAGMPPFGVFISEFLILTA 407
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
36-382 |
4.82e-18 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 87.18 E-value: 4.82e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 36 AFFITLIPLIMFIHLGIESTTTNFNWSNT------STFNINMSFKFDQYSMMF-------MPIALYVTWSILEftywyma 102
Cdd:PRK05846 35 ALIGTLLTLLLSLVLWIGFDSSNAGFQFVekhpwiPRFGISYHLGVDGISLLLvvltallTPLAVLASWEEIK------- 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 103 mdpYTTKFFKYLLIFLVAMMILV-TANNMFQLFIGWEGVGIMSFLLIGWWrGRTEANVSALQAIIYNRTGDIGLMLTMSW 181
Cdd:PRK05846 108 ---KRVKFYMAALLWLEGGVIGVfAALDLLLFYVFFEAMLIPMYFLIGVW-GGKNRIYAATKFFLYTLLGSLLMLVAIIY 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 182 LAT----NMNTWELQQ--MFSFTQPTPLLPLLGLILAATGKSAQFGLHPWLP-AAMEGPTPVSALLhsstmvvAGIFL-- 252
Cdd:PRK05846 184 LVVvyynATGTFDIADllNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPdAHVQAPTAGSVLL-------AGILLkm 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 253 ----LIRVHPILATNNSA--LSICLCLGAITALFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVG-LNQPQLA---FLHI 322
Cdd:PRK05846 257 gaygLLRFSLPLFPDASHefAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFaGNQLGIQgaiFQMI 336
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 323 AmHAFFKAMLFLCSGSIIHSLNNEqDIRKMGGLHKSMPITSSCLTIGNMALMGMPFMTGF 382
Cdd:PRK05846 337 S-HGLSSAALFLLVGVLYDRLHTR-DIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGF 394
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
59-385 |
9.16e-18 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 86.32 E-value: 9.16e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 59 FNWSNTSTFNINMSFKFDQYSMMFMPIALYVTWSILEFTYWYMAMDPYTTKFFKYLLIF-LVAMMILVTANNMFQLFIGW 137
Cdd:COG1007 52 LALGGGTGTAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFaTLGMMLMASANDLLTLFLGL 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 138 EGVGIMSFLLIGWWRGRTEANVSALQ----------------AIIYNRTGDIGLMLTMSWLATNMNTwelqqmfsftqpt 201
Cdd:COG1007 132 ELLSLSLYVLVAFRRDDRRSSEAALKyfllgalssgfllygiSLLYGATGSLNLAGIAAALAAGGAN------------- 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 202 pllpllgLILAATG----------KSAQFGLHPWLPAAMEG-PTPVSALLhSSTMVVAGIFLLIRV-----HPILATNNS 265
Cdd:COG1007 199 -------SPLLLLGlvlvlaglafKLSAVPFHMWTPDVYEGaPTPVTAFL-ATAPKIAAFAALLRLlveafPGLAADWQL 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 266 ALSIclcLGAITALFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGLNQP---QLAFLHIAMHAFFKAMLFLCSGSIIHS 342
Cdd:COG1007 271 LLAV---LAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPlgvSAALFYLLAYLFMNLGAFAVILLLSRK 347
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 84488630 343 LNNEQDIRKMGGLHKSMPITSSCLTIGNMALMGMPFMTGFYSK 385
Cdd:COG1007 348 GGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGK 390
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
110-384 |
6.53e-17 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 83.93 E-value: 6.53e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 110 FFKYLLIFLVAMMILVTANNMFQLFIGWEGVGIMSFLLIGWWRGRTEaNVSALQAIIYNRTGDI-----GLMLTMSWLAT 184
Cdd:PRK12561 89 FYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGGQKR-LYAATKFILYTALASIfilvaGLALALSGDTF 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 185 NMNTWELQqMFSFTQPTPLLPLLGLILAATGKSAQFGLHPWLPAAM-EGPTPVSallhsstMVVAGIFL------LIR-- 255
Cdd:PRK12561 168 TFDLAELG-AKSYPLALELLLYAGFLIAFGVKLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLkmggyaLIRfn 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 256 ------VHPILAtnnsalSICLCLGAITALFSAFCAITQNDIKKIIAFSTSSQLGLMMV------TVGLNQpqlAFLHIA 323
Cdd:PRK12561 240 vqmlpdAHVYFA------PALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLgiaaftDLGISG---AMLQMI 310
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 84488630 324 MHAFFKAMLFLCSGSI---IHSLNneqdIRKMGGLHKSMPITSSCLTIGNMALMGMPFMTGFYS 384
Cdd:PRK12561 311 SHGLIAAALFFLTGVTyerTHTLS----IPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVS 370
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
216-390 |
8.53e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 80.38 E-value: 8.53e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 216 KSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILATNNSALS--ICLCLGAITALFSAFCAITQNDIKK 293
Cdd:PRK07691 222 KAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFThyLILILALLTIIFGVIGAVAYFDIKK 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 294 IIAFSTSSQLGLMMVTVGLNQP---QLAFLHIAMHAFFKAMLFLCSGSIIHsLNNEQDIRKMGGLHKSMPITSSCLTIGN 370
Cdd:PRK07691 302 IIIYNIMIAVGVILVGVAMMTEsgmIGAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKRYPVLGWMFFIAA 380
|
170 180
....*....|....*....|
gi 84488630 371 MALMGMPFMTGFYSKDIIIE 390
Cdd:PRK07691 381 LSLAGIPPLSGFYGKFFIVE 400
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
222-391 |
1.10e-14 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 77.17 E-value: 1.10e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 222 LHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHpiLATNNSAL---SICLCLGAITALFSAFCAITQNDIKKIIAFS 298
Cdd:PRK08042 199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLS--LLGGNAPLwwgVALLVLGMITAFVGGLYALMEHNIQRLLAYH 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 299 TSSQLGLMMVTVG-------LNQPQLAFL-------HIAMHAFFKAMLFLCSGSIIHSlNNEQDIRKMGGLHKSMPITSS 364
Cdd:PRK08042 277 TLENIGIILLGLGagvtgiaLEQPALIALglvgglyHLLNHSLFKSVLFLGAGSVWFR-TGHRDIEKLGGIGKKMPVISI 355
|
170 180
....*....|....*....|....*..
gi 84488630 365 CLTIGNMALMGMPFMTGFYSKDIIIET 391
Cdd:PRK08042 356 AMLVGLMAMAALPPLNGFAGEWVIYQS 382
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-400 |
4.78e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 74.77 E-value: 4.78e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 108 TKFFKYLLIFLVAMMILVTANNMFQLFIGWEGVGIMSFLLIGWWRGRTeANVSALQAIIYNRTGDIGLMLTMSWLATNMN 187
Cdd:PRK12662 110 PSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRDKK-ALVAAFEYLIIGTIGATFYLIGIGFLYAITG 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 188 TWELQQMFSFTQ-----PTPLLPLLGLILAATGKSAQFGLHPWLPAAM-EGPTPVSALLhSSTMVVAGIFLLIRV-HPIL 260
Cdd:PRK12662 189 TLNMGDMFLIIQdlptnRAIQIGVLFIMVGLFIKAALFPFHKWLIQAYsEAPSFISVFF-SGTSTKVMIYLIIRIvYDVF 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 261 ATNNSALS-----ICLCLGAITALFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGLNQPQ---LAFLHIAMHAFFKAML 332
Cdd:PRK12662 268 KANFVFTTlpfnnVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSAL 347
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 84488630 333 FLCSGSIIHSLNNeQDIRKMGGLHKSMPITSSCLTIGNMALMGMPFMTGFYSKDIIIETMNTSylNAW 400
Cdd:PRK12662 348 FMVSGSISYHFGT-TKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKS--NAW 412
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
73-340 |
4.87e-14 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 74.69 E-value: 4.87e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 73 FKFDQYSMMFMPIALYVTWSILEFTYWYMAMDPYTTKFFKYLLIFLVAMMILVTANNMFQLFIGWEGVGIMSFLLIG--- 149
Cdd:PRK08601 68 WHLDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFTTGFASLAWLSGDLRLMALCWGATLLGLTLLIGlnk 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 150 -WWRGRTEANVSALQAIIynrtGDIGLMLTMSWLATNMNTWELQQMFS------FTQPTPLLPLLGLILAATGKSAQFGL 222
Cdd:PRK08601 148 gWKVAREAAKISGMLFLI----SWLALALAIVWLFIATGEWQLTSVLSnenlaqLGTWEKTGINLLLILAVMIPAAQWPF 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 223 HPWLPAAMEGPTPVSALLHSStMVVAGIFLLIRVHPILAtNNSALSICLCLGAITALFSAFCAITQNDIKKIIAFSTSSQ 302
Cdd:PRK08601 224 QRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFH-DDIAQILLLIFASISVLIGTGISLVQVDYKRQLVGSTMAQ 301
|
250 260 270
....*....|....*....|....*....|....*...
gi 84488630 303 LGLMMVTVGLNQPQLAFLHIAMHAFFKAMLFLCSGSII 340
Cdd:PRK08601 302 MGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAV 339
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
216-389 |
1.05e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 73.64 E-value: 1.05e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 216 KSAQFGLHPWLPAA-MEGPTPVSALLhSSTMVVAGIFLLIRVHPILATNNSA---LSICLCLGAITALFSAFCAITQNDI 291
Cdd:PRK08676 219 KSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRQSGAAeqfSNVLIGLGIFSIAVAAFSMLSQRNL 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 292 KKIIAFSTSSQLGLMMVTVGLNQPQLAF---LHIAMHAFFKAMLFLCSGsIIHSLNNEQDIRKMGGLHKSMPITSSCLTI 368
Cdd:PRK08676 298 KKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFRLQPVAAWGVIL 376
|
170 180
....*....|....*....|.
gi 84488630 369 GNMALMGMPFMTGFYSKDIII 389
Cdd:PRK08676 377 GSAAIIGMPPFPLFLSKFFIL 397
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
216-390 |
3.15e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 72.31 E-value: 3.15e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 216 KSAQFGLHPWLPAAM-EGPTPVSA----LLhssTMVvaGIFLLIRVHPILATNNSALSICLCLGAITALFSAFCAITQND 290
Cdd:PRK12665 222 KAAVFPLSFWLPDSYpTAPAPVTAvfagLL---TKV--GVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVGILGAIAQSD 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 291 IKKIIAFSTSSQLGLMMVTVGLNQPQ---LAFLHIAMHAFFKAMLFLCSGsIIHSLNNEQDIRKMGGLHKSMPITSSCLT 367
Cdd:PRK12665 297 IKRLLSFTLVSHIGYMVFGIALSTVAglsGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASPLLAVLFF 375
|
170 180
....*....|....*....|...
gi 84488630 368 IGNMALMGMPFMTGFYSKDIIIE 390
Cdd:PRK12665 376 VPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
220-388 |
4.86e-12 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 68.57 E-value: 4.86e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 220 FGLHPWLP-AAMEGPTPVSALLhSSTMVVAGIFLLIR------------VHPILATnnsalsiclcLGAITALFSAFCAI 286
Cdd:PRK06473 222 VPFHTWLPdAHVEASTPVSVLL-AGVLLKLGTYGLLRfgvglfpeawvyLAPWLAT----------WAVVSVLYGASCAI 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 287 TQNDIKKIIAFSTSSQLGLMMVTVGLNQP---QLAFLHIAMHAFFKAMLFLCSGsIIHSLNNEQDIRKMGGL---HKSMP 360
Cdd:PRK06473 291 AQKDMKKMVAYSSIGHMGYILLAAAAATPlsiLAAVFQMISHGLISALLFLLVG-VVYKKTGSRDVDVLRGLlnpERGLP 369
|
170 180
....*....|....*....|....*...
gi 84488630 361 ITSSCLTIGNMALMGMPFMTGFYSKDII 388
Cdd:PRK06473 370 ITGSLMILGVMASAGIPGMVGFIAEFLV 397
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
72-385 |
7.27e-12 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 67.92 E-value: 7.27e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 72 SFKFDQYSMMFMPIALYVTWSILEFTYWYMAmDPYTTKFFKYLLIFLVAMMILVTANNMFQLFIGWEGVGIMSFLLIGWW 151
Cdd:PRK05777 68 MLVVDGFALFLKGLILLASLLALLLARPYLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALR 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 152 RGRTEANVSALQ----------------AIIYNRTGDIGLMLTMSWLATNMNTwelQQMFSFtqptpllpLLGLILAATG 215
Cdd:PRK05777 147 RDRRRSLEAAIKyfvlgalasgfllygmSLLYGATGSLSFAGIAKALADGSGN---SLLLLF--------GLVFLLVGLA 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 216 -KSAQFGLHPWLPAAMEG-PTPVSALLHSSTMvVAGIFLLIRV-HPILATNNSALSICLCLGAI-TALFSAFCAITQNDI 291
Cdd:PRK05777 216 fKLSAVPFHMWTPDVYEGaPTPVTAFLATAPK-IAAFAVLLRLlVVAFGGLSEDWQQVLAIIAIaSMLVGNLAALSQTNI 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 292 KKIIAFSTSSQLGLMMVTVGLNQP---QLAFLHIAMHAFFKAMLFLCSGSIIHSLNNEQDIRKMGGLHKSMPITSSCLTI 368
Cdd:PRK05777 295 KRLLAYSSIAHAGYLLVGLAAGTAegySAVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTI 374
|
330
....*....|....*..
gi 84488630 369 GNMALMGMPFMTGFYSK 385
Cdd:PRK05777 375 FMLSLAGIPPTAGFWGK 391
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
61-111 |
5.52e-11 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 57.82 E-value: 5.52e-11
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 84488630 61 WSNTSTFNINMSFKFDQYSMMFMPIALYVTWSILEFTYWYMAMDPYTTKFF 111
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
216-389 |
6.42e-11 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 64.97 E-value: 6.42e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 216 KSAQFGLHpWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRV------------HPILATnnsalsiclcLGAITALFSAF 283
Cdd:PRK12663 220 KAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVftllfpqerellHPLLAT----------MAAITMVIGAL 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 284 CAITQNDIKKIIAFSTSSQLGLMMVTVGLNQPQL---AFLHIAMHAFFKAMLFLCSGSIIHsLNNEQDIRKMGGLHKSMP 360
Cdd:PRK12663 289 GALAYKDIRRIAGYQVISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQYLGGLYRKEP 367
|
170 180
....*....|....*....|....*....
gi 84488630 361 ITSSCLTIGNMALMGMPFMTGFYSKDIII 389
Cdd:PRK12663 368 LFGALFLILIFAIGGLPPFSGFWGKVLLV 396
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
39-385 |
6.28e-10 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 61.56 E-value: 6.28e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 39 ITLIPLIMFIHLGIESTTTNFNWSNTSTFNINMSFKFDQYSMMF-MPIALYVTWSILEFTYWYMAMDPYTTKFFKYLLIF 117
Cdd:CHL00049 41 IPWLYFISSTSLVMSITALLFQWREEPMISFSGNFQTNNFNEIFqFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTA 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 118 LVAMMILVTANNMFQLFIGWEGVGIMSFLLIGWWRGRTEANVSALQAIIYNRTGDIGLMLTMSWL----ATNMNTWELQQ 193
Cdd:CHL00049 121 TLGGMFLCGANDLITIFVALECLSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVYGFSWLyglsGGEIELQEIVN 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 194 MFSFTQPTPLLPLLGLILAATG----KSAQFGLHPWLPAAMEG-PTPVSALLhSSTMVVAGIFLLIR----VHPILATN- 263
Cdd:CHL00049 201 GLINTQMYNSPGISIALIFITVgigfKLSLAPFHQWTPDVYEGsPTPVVAFL-SVTSKVAASALATRifdiPFYFSSNEw 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 264 NSALSICLCLGAItalFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGLNQPQLA--------FLHIAMH--AFFKAMLF 333
Cdd:CHL00049 280 HLLLEILAILSMI---LGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGyasmitymLFYIFMNlgTFACIVLF 356
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 84488630 334 lcsgsiihSLNNEQD-IRKMGGLHKSMPITSSCLTIGNMALMGMPFMTGFYSK 385
Cdd:CHL00049 357 --------GLRTGTDnIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
71-382 |
1.32e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 60.71 E-value: 1.32e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 71 MSFKFDQYSMMFMPIALYVTWSILEFtywymamdpYTTKFFKYLLIFLVAMMILVTANNMFQLFIGWEGVGIMSFLLIGW 150
Cdd:MTH00226 103 ISIYFIILTGFIVPCSILISWHSVKY---------LTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGI 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 151 WRGRTEANVSALQAIIYNRTGDIGLMLTMSWLATNMNTWELQQMFS----FTQPTPLLPLLGLILAATGKSAQFGLHPWL 226
Cdd:MTH00226 174 WGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLAScshvVSEQTQKWIFLGIFLAMAVKIPIFPFHIWL 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 227 PAA-MEGPTPVSALLHSSTMVVAGIFLLIRVHPILATNNSALS-ICLCLGAITALFSAFCAITQNDIKKIIAFSTSSQLG 304
Cdd:MTH00226 254 PKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLApAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMG 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 305 LMMVT------VGLNQPQLAFLhiaMHAFFKAMLFLCSgSIIHSLNNEQDIRKMGGLHKSMPITSSCLTIGNMALMGMPF 378
Cdd:MTH00226 334 LVSITlvthdiIGLTGSIFIML---AHGIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPP 409
|
....
gi 84488630 379 MTGF 382
Cdd:MTH00226 410 SGNF 413
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
222-390 |
2.82e-09 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 59.73 E-value: 2.82e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 222 LHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIR------------VHPILATnnsalsiclcLGAITALFSAFCAITQN 289
Cdd:PRK07363 224 LHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRfglqlfpqtwslVAPGLAI----------IGTISVIYGALSAIAQK 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 290 DIKKIIAFSTSSQLGLMMVTVGLNQPQL---AFLHIAMHAFFKAMLFLCSGsIIHSLNNEQDIRKMGGLH---KSMPITS 363
Cdd:PRK07363 294 DIKRMVAYSSIGHMGYILVAAAAGTQLSllgAVAQMISHGLILALLFHLVG-IVERKVGTRDLDVLNGLMnpiRGLPLTS 372
|
170 180
....*....|....*....|....*..
gi 84488630 364 SCLTIGNMALMGMPFMTGFYSKDIIIE 390
Cdd:PRK07363 373 ALLVLAGMASAGIPGLVGFVAEFIVFQ 399
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
236-390 |
2.25e-08 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 56.58 E-value: 2.25e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 236 VSALLHS-STMVVAGIFLLI-RVHPILATNNSALSICLCLGAITALFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGLN 313
Cdd:PRK06277 233 GSALLQTfSKFVLVALMLVIfKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALG 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 314 QP---QLAFLHIAMHAFFKAMLFLCSGsIIHSLNNEQDIRKMGGLHKSMPITSSCLTIGNMALMGMPFMTGFYSKDIIIE 390
Cdd:PRK06277 313 TPlgiVAGIFHAINHVIYKSALFLGAG-IVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQ 391
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
268-398 |
2.50e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 56.66 E-value: 2.50e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 268 SICLCLGAITALFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGLNQPQ-----LAFLHIAMHAFFKAMLFLCSGSIIHS 342
Cdd:PRK12664 202 EILLFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSgvaigILILQIVLSVVYQTLLFMVADSVINR 281
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 84488630 343 lNNEQDIRKMGGLHKsMPITSSCLTIGNMALMGMPFMTGFYSKDIIIETMNTSYLN 398
Cdd:PRK12664 282 -TRKFNLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLT 335
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
106-395 |
1.05e-07 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 54.71 E-value: 1.05e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 106 YTTKFFKYLLIFLVAMMILVTA-NNMFQLFIGWEGVGIMSFLLIGWWRGRTEaNVSALQAIIYNRTGDIGLM---LTMSW 181
Cdd:PRK02546 112 FKPKLFYFLMLAMYGGQIAVFAvQDMLLFFLAWELELIPVYLLLAIWGGKKR-QYAATKFILYTAGSSLFILlaaLAMAF 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 182 LaTNMNTWELQQMFS--FTQPTPLLPLLGLILAATGKSAQFGLHPWLPAAM-EGPTPVSALLhsstmvvAGIFLLIRVHP 258
Cdd:PRK02546 191 Y-GDTPTFDMTALAAkdFGLGFQLLCYAGLLIAYGVKLPIVPLHTWLPDAHgEATAPVHMLL-------AGILLKMGGYA 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 259 ILATNNSALS--------ICLCLGAITALFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGLNQP---QLAFLHIAMHAF 327
Cdd:PRK02546 263 LLRMNAGMLPdahaqfapLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFTDlgtSGAMLQMISHGL 342
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 84488630 328 FKAMLFLCSGSI---IHSLNNEQdirkMGGLHKSMPITSSCLTIGNMALMGMPFMTGFYSKDIIIETMNTS 395
Cdd:PRK02546 343 IGASLFFLVGATydrTHTLMLDE----MGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMVFVGFATS 409
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
37-382 |
1.33e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 54.30 E-value: 1.33e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 37 FFITLIPLIMFIHLGIESTTTNFNWSNTSTFNINMS---FKFDQYSMMFM-------PIALYVTWSILEFTYwymamdpy 106
Cdd:MTH00204 40 LFSTLVLWGAFDGEGQFQFINLIEWIISPTLNFQWGplvFAVDGVSLFFIllttlliPICILISWKSIKFLF-------- 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 107 ttKFFKYLLIFLVAMMILV-TANNMFQLFIGWEGVGIMSFLLIGWWRGRTEANVSALQAIIYNRTGDIGLMLTMSWLATN 185
Cdd:MTH00204 112 --KEFLLCLLFLEVLLIGVfSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSI 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 186 MNTWELQ-----QMFSFTQPTPLLPLLGLILAatgKSAQFGLHPWLPAA-MEGPTPVSALLHSSTMVVAGIFLLIRVHPI 259
Cdd:MTH00204 190 TGTTDYQillniKLPLSIQKWLLVGFFLSLAV---KIPQIPFHIWLPQAhVEAPVAGSVILAGILLKLGGYGFLRFSWPL 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 260 LATNNSALS-ICLCLGAITALFSAFCAITQNDIKKIIAFSTSSQLGLmmVTVGLNQPQL------AFLHIAmHAFFKAML 332
Cdd:MTH00204 267 FPAASEYFApLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGL--VPLGLFTHTIeglvaaVFLMLA-HGFVSSAL 343
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 84488630 333 FLCSgSIIHSLNNEQDIRKMGGLHKSMPITSSCLTIGNMALMGMPFMTGF 382
Cdd:MTH00204 344 FIAV-TFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNF 392
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
134-388 |
2.47e-07 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 53.41 E-value: 2.47e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 134 FIGWEGVGIMSFLLIGWWRGRTEAnVSALQAIIYNRTGDIGLM---LTMSWLATNMNTWELQQMF--SFTQPTPLLPLLG 208
Cdd:CHL00011 138 FIMWELELIPVYLLLSMWGGKKRL-YSATKFILYTAGGSIFLLigvLGMGLYGSNEPTLNFETLAnqSYPVALEILFYIG 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 209 LILAATGKSAQFGLHPWLPaamegPTPVSAllHSST-MVVAGIFL------LIRVHPILATNnsALSI----CLCLGAIT 277
Cdd:CHL00011 217 FLIAYAVKLPIIPLHTWLP-----DTHGEA--HYSTcMLLAGILLkmgaygLIRINMELLPH--AHSIfspwLVIVGAIQ 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 278 ALFSAFCAITQNDIKKIIAFSTSSQLGLMMVTV------GLNQpqlAFLHIAMHAFFKAMLFLCSGSI---IHSLNNEQd 348
Cdd:CHL00011 288 IIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIgsitdtGLNG---AILQIISHGFIGAALFFLAGTSydrIRLVYLDE- 363
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 84488630 349 irkMGGLHKSMPITSSCLTIGNMALMGMPFMTGFYSKDII 388
Cdd:CHL00011 364 ---MGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIV 400
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
42-385 |
9.99e-07 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 51.59 E-value: 9.99e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 42 IPLIMFIHLGIESTTTNFNWSNTSTFNINMSFKFDQYSMMFMP-IALYVTWSIL-EFTYWYMAMDPyTTKFFKYLLIFLV 119
Cdd:PRK02504 43 LPYLAIAGLGAALVALALQWDNPNPISFLGSFNADNLSIAFRAiIALSTLVTLLmSWRYVEQSGTP-LGEFAAILLTATL 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 120 AMMILVTANNMFQLFIGWEGVGIMSFLLIGWWRGRTEANVSALQAIIYNRTGDIGLMLTMSWL------ATNMNtwELQQ 193
Cdd:PRK02504 122 GGMFLSGATELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSSLLyglsggSTQLS--AIAL 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 194 MFSFTQPTPLLPLLGLILAATG-KSAQFGLHPWLPAAMEG-PTPVSALLhSSTMVVAGIFLLIRvhpILATNNSALS--- 268
Cdd:PRK02504 200 ALITSPSLGLALALVFVIAGIAfKISAVPFHQWTPDVYEGsPTPVVAFL-SVGSKAAGFALAIR---LLVTAFPSFDeqw 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 269 --ICLCLGAITALFSAFCAITQNDIKKIIAFSTSSQLGLMMV--TVGLNQPQLAF-LHIAMHAFFKAMLFLCsgSIIHSL 343
Cdd:PRK02504 276 klLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIglVAGTEAGYASMvFYLLAYLFMNLGAFAC--VILFSL 353
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 84488630 344 NNEQD-IRKMGGLHKSMPITSSCLTIGNMALMGMPFMTGFYSK 385
Cdd:PRK02504 354 RTGTDqISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
35-377 |
1.13e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 51.09 E-value: 1.13e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 35 MAFFITLIPLIMFIHLGIESTTTNFNWSNTSTFninmsFKFDQYSMMFMPIALYVTWSILEFTYWYMAMDPYTT-KFFKY 113
Cdd:MTH00206 22 WRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLY-----LSYDPLSSPLVILSCWLLPLMFLASQNHMKNEPINRqRIYIT 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 114 LLIFLVAMMILV-TANNMFQLFIGWEGVGIMSFLLIGWWRGRTEANVSALQAIIYNRTGDIGLMLTMSWLATNMNTW--E 190
Cdd:MTH00206 97 LLIVLQLFLILFfSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLslY 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 191 LQQMFSFTQPTPLLPLLGLILAATGKSAQFGLHPWLPAA-MEGPTpvsallhSSTMVVAGIFL------LIRVHPILA-T 262
Cdd:MTH00206 177 ILYFSKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAhVEAPV-------AGSMVLAGVLLklggygMMRIILILGpS 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 263 NNSALSICLCLGAITALFSAFCAITQNDIKKIIAFSTSSQLGLM------MVTVGLNQpqlAFLHIAMHAFFKAMLFlCS 336
Cdd:MTH00206 250 TKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVtagilsGSPWGFKG---ALLLMIAHGLVSSALF-CL 325
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 84488630 337 GSIIHSLNNEQDIRKMGGLHKSMPITSSCLTIGNMALMGMP 377
Cdd:MTH00206 326 ANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLP 366
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
222-392 |
2.37e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 46.74 E-value: 2.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 222 LHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILATNnsalsICLCLGAITALFSAFCAITQNDIKKIIAFSTSS 301
Cdd:MTH00112 111 FHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPT-----LLLTLAILSTLIGGWGGLNQTQLRKIMAFSSIA 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 302 QLGLMMVTVGLNqPQLAFLHIAMHAFFKAMLFLcsgsIIHSLNNEQdIRKMGGLHKSMPITSSCLTIGNMALMGMPFMTG 381
Cdd:MTH00112 186 HLGWMIAIITYS-PKLTLLTFYIYILMTTPMFL----TLNTTSTKT-LKDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTG 259
|
170
....*....|.
gi 84488630 382 FYSKDIIIETM 392
Cdd:MTH00112 260 FMPKWLILQEL 270
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
96-339 |
8.54e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 45.55 E-value: 8.54e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 96 FTYWYMAMDPYTTKFFKYLLIFLV-AMMILVTANNMFQLFIGWEGVGIMSFLLIGWWRGRTEAnvsalqAIIYNRTGDIG 174
Cdd:PRK06459 59 LASLYSIEYDHYGKWLSSLYILTIlGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKKNKRP------AFVFMAFGELS 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 175 LMLTmswLATNMNTWELQQMFSFTQPTPLLPLLGLILAATGKSAQFGLH--PWLPAAM-EGPTPVSALLhSSTMVVAGIF 251
Cdd:PRK06459 133 TVLI---LAGFAWAFIISGTTNFSYLPSPVPLILASFGFIIKMGMMPFLvsEWLPIAHgNAPSNFSAIL-SATMTLMGVY 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 252 LLIRVhPILATNNSALSICLCL---GAITALFSAFCAITQNDIKKIIAFSTS-------SQLGLMMVTVGLNQPQLAFLH 321
Cdd:PRK06459 209 GILKM-TILTQTIPIGYFGLTIlaiGAFSILFGALYAYVSENVKGLLAFSTIenngailVALGLYMVTKQLITSIEHFSL 287
|
250 260
....*....|....*....|....
gi 84488630 322 IAM------HAFFKAMLFLCSGSI 339
Cdd:PRK06459 288 ITVilysfaHSVAKTGLFLSSGLQ 311
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
103-397 |
1.83e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 43.80 E-value: 1.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 103 MDPYTTKFFKYLLIFLvaMMILVTANNMFQLFIGWEGVGIMSFLLIGWWRGRTEANVSALQAIIYnrtgdiGLMLTMSWL 182
Cdd:MTH00200 1 MSPLILPLFILSLGLG--TLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQ------ATASALLLF 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 183 ATNMNTWeLQQMFSFTQPTPLLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILAT 262
Cdd:MTH00200 73 GGLLNAW-TSGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNS 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 263 NnsalsICLCLGAITALFSAFCAITQNDIKKIIAFSTSSQLGLMMVTVGLNqPQLAFLHIAMHAFFKAMLFLcsgsiIHS 342
Cdd:MTH00200 152 N-----ILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS-PNLALLYLLLYVIITLTVFL-----LLN 220
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 84488630 343 LNNEQDIRKMGGLHKSMPITSSCLTIGNMALMGMPFMTGFYSKDIIIETMNTSYL 397
Cdd:MTH00200 221 LLNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGL 275
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
223-391 |
2.15e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 43.87 E-value: 2.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 223 HPWLPAAMEG-PTPVSALLhsSTMVVAGIFLlirvhpILATNNSALSICLCLGAITALFSAFCAITQNDIKKIIAFSTSS 301
Cdd:MTH00196 115 HMWAPDVYEGaPTKTTALL--AIVPKLGIFS------ILVSIGLNVNILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIG 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 302 QLGLMMVTVGLNQ---PQLAFLHIAMHAFFKAMLFlcsgSIIHSLNNEQD-IRKMGGLHKSMPITSSCLTIGNMALMGMP 377
Cdd:MTH00196 187 HMGFVLWGIEIGSfesIQASLVYLFIYIIMSICVF----SIILALNVYKNlIIEFSGLSRRLPILAITLALTFLSIAGIP 262
|
170
....*....|....
gi 84488630 378 FMTGFYSKDIIIET 391
Cdd:MTH00196 263 PLVGFLGKWLILLS 276
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
54-314 |
3.58e-04 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 43.19 E-value: 3.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 54 STTTNFNWSNTSTFNINMSFKFDQYSMMFMPIALYVTWSILEFTYWYMAMDPYTTKFFKYLLIFLVAMMILVTANNMFQL 133
Cdd:MTH00014 36 FTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASFKIFQNNKAPKTFMTNILILNLILLLTFSASNLLMF 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 134 FIGWEGVGIMSFLLIGWWRGRTEANVSALQAIIYNRTGDIGLMLTMSWLATNMNTWEL--QQMFSFTQPTPLLPLLGLIL 211
Cdd:MTH00014 116 YIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSLSMlmSSMEPPSIYLMNLWWLITIL 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 212 AATGKSAQFGLHPWLPAA-MEGPTpvsallhSSTMVVAGIFL------LIRVHPILATNNSALS-----ICLCLGAITAL 279
Cdd:MTH00014 196 AFMVKMPLYTVHLWLPKAhVEAPV-------AGSMILAGILLklggygLLRMSSLFMHINKSLSapfssISLVGAVITSL 268
|
250 260 270
....*....|....*....|....*....|....*
gi 84488630 280 FsafcAITQNDIKKIIAFSTSSQLGLMMVTVGLNQ 314
Cdd:MTH00014 269 I----CIRQPDLKSLIAYSSVGHMGLMTAGIMSNT 299
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
55-310 |
3.65e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 43.43 E-value: 3.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 55 TTTNFNWSNTSTFNINMSFKFDQYSMMFMPIALYVTWSILEFTYWYMAMDPYTTKFFKYLLIFLVAMMILVTANNMFQLF 134
Cdd:MTH00205 35 SSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFY 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 135 IGWEGVGIMSFLLIGWWRGRTEANVSALQAIIYNRTGDIGLMLTMSWLATNMNTWELQQMFSFTQPTPLLPLLGLI--LA 212
Cdd:MTH00205 115 ITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNFSDFYLFLYWIFlmLA 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 213 ATGKSAQFGLHPWLPAA-MEGPTpvsallhSSTMVVAGIFL------LIRVHPILATNNSALS---ICLCLgaITALFSA 282
Cdd:MTH00205 195 FLVKLPMYFVHLWLPKAhVEAPV-------SGSMILAGVLLklggygLIRITSMLYKLNSNFSelfFSISL--WGGVMTG 265
|
250 260
....*....|....*....|....*...
gi 84488630 283 FCAITQNDIKKIIAFSTSSQLGLMMVTV 310
Cdd:MTH00205 266 MICLRQVDLKSLIAYSSVGHMGLMVVGV 293
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
222-392 |
9.68e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 41.83 E-value: 9.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 222 LHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVHPILATNnsalsICLCLGAITALFSAFCAITQNDIKKIIAFSTSS 301
Cdd:MTH00070 111 FHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSN-----LLIIMGLLSTLIGGWGGLNQTQLRKIMAYSSIA 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 302 QLGLMMVTVGLNqPQLAFLHIAMHAFFKAMLFLcsgSIIHSlnNEQDIRKMGGLHKSMPITSSCLTIGNMALMGMPFMTG 381
Cdd:MTH00070 186 HLGWMIIILTFS-PHLTLLNLLIYLIMTSSMFL---MLMNL--NSTNINKLSSSWSKNPTLTSMMMLTLLSLGGLPPTTG 259
|
170
....*....|.
gi 84488630 382 FYSKDIIIETM 392
Cdd:MTH00070 260 FIPKWLILQEL 270
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
220-391 |
2.22e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 40.68 E-value: 2.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 220 FGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRVhpilaTNNSALSICLCLGAITALFSAFCAITQNDIKKIIAFST 299
Cdd:MTH00041 109 APCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISI-----SNLLNSNILILCGILSVLVGGWGGLNQTQTRKILAFSS 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488630 300 SSQLGLMMVTVGLNqPQLAFLHIAMHAFFKAMLFLcsgsiIHSLNNEQDIRKMGGLHKSMPITSSCLTIGNMALMGMPFM 379
Cdd:MTH00041 184 IAHLGWIIITSAYS-PNASIIMFLIYIIINTSIFL-----IGNNFSLSTLSHLNKLSQLNPISAFLFILSILSLGGLPPL 257
|
170
....*....|..
gi 84488630 380 TGFYSKDIIIET 391
Cdd:MTH00041 258 TGFLNKFISLYC 269
|
|
| |
