|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
2.33e-158 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 446.96 E-value: 2.33e-158
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 1 MNPYTTTIIITSLIMGPLLTISSSHWILAWTGLEISTLAIIPLIAKQHHPRAIEAATKYFLTQAIASTLILFSSITNAWT 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 81 SGQWNTTQMLNNIPSTILTMALAIKLGLAPFHFWLPEVLQGVTMMTALTLTTWQKLAPLSLLVMMAQSMNTPLMLTLGLV 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 161 SATIGGWNGLNQTQLRKIMAFSSIAHLGWMATILTLSPKLMLLTFYTYIIMTSTMFLMIKLLETNKISMMMTSWTKLPTL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 241 NTTMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLSLLNLFFYLRISYYATITLSPNSTNYLQQWRHKTN 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 84488750 321 QKYYLAPMTTLSITLLPMTPTLLTII 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.03e-147 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 419.98 E-value: 1.03e-147
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 1 MNPYTTTIIITSLIMGPLLTISSSHWILAWTGLEISTLAIIPLIAKQHHPRAIEAATKYFLTQAIASTLILFSSITNAWT 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 81 SGQWNTTQMLNNIPSTILTMALAIKLGLAPFHFWLPEVLQGVTMMTALTLTTWQKLAPLSLLVMMAQSmNTPLMLTLGLV 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 161 SATIGGWNGLNQTQLRKIMAFSSIAHLGWMATILTLSPKLMLLTFYTYIIMTSTMFLMIKLLETNKISMMMTSWTKLPTL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 241 NTTMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLSLLNLFFYLRISYYATITLSPNSTNYLQQWRHKTN 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|....*..
gi 84488750 321 QKYY-LAPMTTLSITLLPMTPTLLTII 346
Cdd:MTH00135 320 QLTLpLAISTTATLMLLPLTPAILALL 346
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
3.18e-138 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 396.21 E-value: 3.18e-138
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 1 MNPYTTTIIITSLIMGPLLTISSSHWILAWTGLEISTLAIIPLIAKQHHPRAIEAATKYFLTQAIASTLILFSSITNAWT 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 81 SGQWNTTQMLNNIPSTILTMALAIKLGLAPFHFWLPEVLQGVTMMTALTLTTWQKLAPLSLLVMMAQSMNTPLMLTLGLV 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 161 SATIGGWNGLNQTQLRKIMAFSSIAHLGWMATILTLSPKLMLLTFYTYIIMTSTMFLMIKLLETNKISMMMTSWTKLPTL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 241 NTTMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLSLLNLFFYLRISYYATITLSPNSTNYLQQWRHKTN 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*.
gi 84488750 321 QKYYLAPMTTLSITLLPMTPTLLTII 346
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILNLF 346
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
3.99e-124 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 360.32 E-value: 3.99e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 1 MNPYTTTIIITSLIMGPLLTISSSHWILAWTGLEISTLAIIPLIAKQHHPRAIEAATKYFLTQAIASTLILFSSITNAWT 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 81 SGQWNTTQMLNNIPSTILTMALAIKLGLAPFHFWLPEVLQGVTMMTALTLTTWQKLAPLSLLVMMAQSMNTPLMLTLGLV 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 161 SATIGGWNGLNQTQLRKIMAFSSIAHLGWMATILTLSPKLMLLTFYTYIIMTSTMFLMIKLLETNKISMMMTSWTKLPTL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 241 NTTMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLSLLNLFFYLRISYYATITLSPNSTNYLQQWRHK-T 319
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFEnT 320
|
330 340
....*....|....*....|....*.
gi 84488750 320 NQKYYLAPMTTLSITLLPMTPTLLTI 345
Cdd:MTH00105 321 KPMTLLPTLIILSTMLLPLTPMLSIL 346
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
3.72e-102 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 304.58 E-value: 3.72e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 1 MNPYTTTIIITSLIMGPLLTISSSHWILAWTGLEISTLAIIPLIAKQHHPRAIEAATKYFLTQAIASTLILFSSITNAWT 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 81 SGQWNTTQMLNNIPSTILTMALAIKLGLAPFHFWLPEVLQGVTMMTALTLTTWQKLAPLSLLVMMAQSMNTPLMLTLGLV 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 161 SATIGGWNGLNQTQLRKIMAFSSIAHLGWMATILTLSPKLMLLTFYTYIIMTSTMFLMIKLLETNKISMMMTSWTKLPTL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 241 NTTMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLSLLNLFFYLRISYYATITLSPNSTNYLQQWRHKTN 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 84488750 321 QKYYLAPMTTLSITLLPMTPTLLTII 346
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-339 |
4.55e-89 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 271.03 E-value: 4.55e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 1 MNPYTTTIIITSLIMGPLLTISSSHWILAWTGLEISTLAIIPLIAKQHHPRAIEAATKYFLTQAIASTLILFSSITNAWT 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 81 SGQWNTTQMLNNIPSTILTMALAIKLGLAPFHFWLPEVLQGVTMMTALTLTTWQKLAPLSLLVMMAQSMNTPLMLTLGLV 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 161 SATIGGWNGLNQTQLRKIMAFSSIAHLGWMATILTLSPKLMLLTFYTYIIMTSTMFLMIKLLETNKISMMMTSWTKLPTL 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 241 NTTMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLSLLNLFFYLRISYYATITLSPNSTNYLQQWRHKTN 320
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGN 320
|
330 340
....*....|....*....|....*
gi 84488750 321 QKYY------LAPMTTLSITLLPMT 339
Cdd:MTH00041 321 ITVYgvilsiLSSISILGLLLIPLF 345
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
6.77e-60 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 195.43 E-value: 6.77e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 1 MNPYTTTIIITSLIMGPLLTISSSHWILAWTGLEISTLAIIPLIAKQHHPRAIEAATKYFLTQAIASTLILFSSITNAwt 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNM-- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 81 sgqwNTTQMLNNIPSTILTMALAIKLGLAPFHFWLPEVLQGVTMMTALTLTTWQKLAPLSLLVMMaqsMNTPLMLTLGLV 160
Cdd:MTH00160 80 ----LNLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 161 SATIGGWNGLNQTQLRKIMAFSSIAHLGWMATILTLSPKLMLLTFYTYIIMTSTMFLMIKLLETNKISMMMTSWTKLPTL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 241 NTTMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLSLLNLFFYLRISYYATITLSPNSTNYLQQwrHKTN 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLKK--KKNK 310
|
330 340
....*....|....*....|....*
gi 84488750 321 QKYYLAPMTTLSITLLPMTPTLLTI 345
Cdd:MTH00160 311 FSLILNFLSFISLFGLILSSLLFLL 335
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
13-305 |
1.22e-55 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 184.32 E-value: 1.22e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 13 LIMGPLLTISSSHWILAWTGLEISTLAIIPLIAKQHHPRAIEAATKYFLTQAIASTLILFSSITNAWTSGQWNTtqmlnn 92
Cdd:MTH00144 13 MVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFS------ 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 93 ipSTILTMALAIKLGLAPFHFWLPEVLQGVTMMTALTLTTWQKLAPLSLLVMMAQSMNTPLML-TLGLVSATIGGWNGLN 171
Cdd:MTH00144 87 --MSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLcVISVLSALVGSIGGLN 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 172 QTQLRKIMAFSSIAHLGWMATILTLSPKLMLLTFYTYIImtSTMFLMIKLLETNKISM-MMTSWTKLPTLNTTMMLTLMS 250
Cdd:MTH00144 165 QTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIV--SSGFLFFSLWSGDSGSMkDLGSLKPSYKTGLSIISLLLS 242
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 84488750 251 LAGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLSLLNLFFYLRISYYATITLS 305
Cdd:MTH00144 243 LGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSS 297
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
12-337 |
3.34e-51 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 173.04 E-value: 3.34e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 12 SLIMGPLLTISSSHWILAWTGLEISTLAIIPLIAKQHHPRAIEAATKYFLTQAIASTLILFSSITnawtsgQWNTTQMLN 91
Cdd:MTH00011 14 TMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTM------MWSFPSLLK 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 92 NIPSTILTMALAIKLGLAPFHFWLPEVLQGVTMMTALTLTTWQKLAPLSLLVMMAQSMNTPLMLTLGLVSATIGGWNGLN 171
Cdd:MTH00011 88 NITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGGLGGMN 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 172 QTQLRKIMAFSSIAHLGWMATILTLSPKLMLLTFYTYIIMTSTMFLMIKLLETNKISMMMTSWTKLPTLNTTMMLTLMSL 251
Cdd:MTH00011 168 QTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLSL 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 252 AGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLSLLNLFFYLRIsYYATITLSPNSTNYLQQWRHKTNQkyYLAPMTTL 331
Cdd:MTH00011 248 GGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNL-IFNFMYLSPTFSSLKSAPYEPKTK--ILISMCTL 324
|
....*.
gi 84488750 332 SITLLP 337
Cdd:MTH00011 325 SLGLIP 330
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
12-298 |
2.10e-39 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 141.73 E-value: 2.10e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 12 SLIMGPLLTISSSHWILAWTGLEISTLAIIPLIAKQHHPRAIEAATKYFLTQAIASTLILFSSitnaWTSGQWNTTQMLN 91
Cdd:MTH00197 6 IIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGG----SLSFSNLYLSLLS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 92 NIPSTIltmALAIKLGLAPFHFWLPEVLQGVTMMTALTLTTWQKLAPLSLLvmMAQSMNTPLMLTLGLVSATIGGWNGLN 171
Cdd:MTH00197 82 VVLVIL---GLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLIL--AFNSSSFMGLLICSVLSSLIGGIGGMN 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 172 QTQLRKIMAFSSIAHLGWMATILTLSPKLMLLTFYTYIIMTSTMFLMIKLLETNKISMMMTSWTKLPTLNTTMMLTLMSL 251
Cdd:MTH00197 157 QSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSL 236
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 84488750 252 AGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLSLLNLFFYLRISY 298
Cdd:MTH00197 237 GGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAY 283
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
1.28e-29 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 116.67 E-value: 1.28e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 13 LIMGPLLTISSSHWILAWTGLEISTLAIIPLIA-KQHHPRAIEAATKYFLTQAIASTLILFS-------------SITNA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIAqNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 79 WTSGQWNTTQMLNNIPSTILTMALAIKLGLAPFHFWLPEVLQGVTMMTALTLTTWQKLAPLSLLVMMAQSMNtpLMLTLG 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNVN--ILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 159 LVSATIGGWNGLNQTQLRKIMAFSSIAHLGWMATILTL----SPKLMLLTFYTYIIMTSTMFLMIKLLETNKISMMMTS- 233
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIgsfeSIQASLVYLFIYIIMSICVFSIILALNVYKNLIIEFSg 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 84488750 234 -WTKLPTLNTTMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLSLLNLFFYLRI 296
Cdd:MTH00196 240 lSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
14-299 |
3.15e-28 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 114.06 E-value: 3.15e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 14 IMGPLLTISSSHWILAWTGLEISTLAIIPLIA-KQHHPRAIEAATKYFLTQAIASTLILF--------------SSITNA 78
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgisllygatgslnlAGIAAA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 79 WTSGQWNTTQMLnniPSTILTMA-LAIKLGLAPFHFWLPEVLQGVTMMTALTLTTWQKLAPLS----LLVMMAQSMNTPL 153
Cdd:COG1007 192 LAAGGANSPLLL---LGLVLVLAgLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAallrLLVEAFPGLAADW 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 154 MLTLGLVSA---TIGGWNGLNQTQLRKIMAFSSIAHLGWMATILTLSPKLML--LTFY--TYIIMTSTMFLMIKLLET-N 225
Cdd:COG1007 269 QLLLAVLAVlsmTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVsaALFYllAYLFMNLGAFAVILLLSRkG 348
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 84488750 226 KISMMMTSWTKL----PTLNTTMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLSLLNLFFYLRISYY 299
Cdd:COG1007 349 GEAEEIEDLAGLarrsPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVKA 426
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-286 |
4.39e-26 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 105.47 E-value: 4.39e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 23 SSHWILAWTGLEISTLAIIPLIA-KQHHPRAIEAATKYFLTQAIASTLILFSSITNAWTSGQWNTTQMLNNIPSTI---- 97
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGyWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 98 -------LTMALAIKLGLAPFHFWLPEVLQGV-TMMTALTLTTWQKLAPLSLLVMMAQSMN-----TPLMLTLGLVSATI 164
Cdd:pfam00361 81 llllfllILVGFLFKSAQVPFHTWLPDAYEGApTPVSALLAATLVKAGGYGLIRRSLLYLPsspfiQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 165 GGWNGLNQTQLRKIMAFSSIAHLGWMATILTL----SPKLMLLTFYTYIIMTSTMFLMIKLLE-----TNKISMMMTSWT 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAgtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIyrrvhTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 84488750 236 KLPTLNTTMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLS 286
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
13-300 |
2.54e-25 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 105.61 E-value: 2.54e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 13 LIMGPLLTISSSHWILAWTGLEISTLAIIPLIAKQHHPRAIEAATKYFLTQAIASTLILFSSITNAWTSGQWNTTQMLNN 92
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAR 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 93 IPS----------TILTMALAIKLGLAPFHFWLPE-----------VLQGVTMmtaltlttwqKLAPLSLLVM------- 144
Cdd:COG0651 196 LAEldpglllaafALLLVGFGIKAALFPLHFWLPDaypaapspvsaLLSGLLT----------KVGVYAILRVltllfga 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 145 MAQSMNTPLMLTLGLVSATIGGWNGLNQTQLRKIMAFSSIAHLGWMATILTLSPKLMLLTFYTYII----MTSTMFL--- 217
Cdd:COG0651 266 DPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLnhalAKALLFLaag 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 218 -MIKLLETNKISMMMTSWTKLPTLNTTMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLSLLNLFFYLRI 296
Cdd:COG0651 346 aIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
....
gi 84488750 297 SYYA 300
Cdd:COG0651 426 FGRA 429
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-296 |
2.63e-25 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 106.06 E-value: 2.63e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 14 IMGPLLTISSSHWILAWTGLEISTLAIIPLIA-KQHHPRAIEAATKYFLTQAIASTLIL--------------FSSITNA 78
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLygmsllygatgslsFAGIAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 79 WTSGQWNTTQMLNNIpsTILTMALAIKLGLAPFHFWLPEVLQGVTMMTALTLTTWQKLAP----LSLLVMMAQSMNT--- 151
Cdd:PRK05777 193 LADGSGNSLLLLFGL--VFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAfavlLRLLVVAFGGLSEdwq 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 152 PLMLTLGLVSATIGGWNGLNQTQLRKIMAFSSIAHLGWMATILTLSPKLML--LTFY--TYIIMTSTMFLMIKLLETNKI 227
Cdd:PRK05777 271 QVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsaVLFYllAYLFMTLGAFGVISLLRRKGG 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 84488750 228 SM-MMTSWTKL----PTLNTTMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLSLLNLFFYLRI 296
Cdd:PRK05777 351 EAeSISDFAGLskrsPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
3.28e-25 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 105.48 E-value: 3.28e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 13 LIMGPLLTISSSHWILAWTGLEISTLAIIPLIA-KQHHPRAIEAATKYFLTQAIASTLILFSSI----TNAWTSGQWNTT 87
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCAllygLTGETSIQGINS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 88 QMLNNIPSTILTMALAIKLGLAPFHFWLPEVLQGVTMMTALTLTTWQKLAPLSLLVMMAQSMNtpLMLTLGLVSATIGGW 167
Cdd:MTH00199 186 ILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTN--VVLICAVLSIIYGAI 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 168 NGLNQTQLRKIMAFSSIAHLGWMATILTL----SPKLMLLTFYTYIIMTSTMFLMIKLLETNKISMMMTSWT--KLPTLN 241
Cdd:MTH00199 264 GALNQTKIKRLLAYSGIGHMGFILFGVAIgsfeSIQASLIYMIIYVIMSICSFSIILSLKLTKGLIVEVSGLsrKNPVIA 343
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 84488750 242 TTMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLSLLNLFFYLRI 296
Cdd:MTH00199 344 LTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
14-296 |
1.23e-22 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 98.10 E-value: 1.23e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 14 IMGPLLTISSSHWILAWTGLEISTLAIIPLIA-KQHHPRAIEAATKYFLTQAIASTLILFSSITNAWTSGQWN---TTQM 89
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNfedLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 90 LNNIPSTI---------LTMALAIKLGLAPFHFWLPEVLQGVTMMTALTLTTWQKLAPLSLLVMMAQSM-------NTPL 153
Cdd:TIGR01770 192 LSNGMLNIsllllgivlILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYIlfgfseaWQIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 154 MLTLGLVSATIGGWNGLNQTQLRKIMAFSSIAHLGWMATILTLSPKL----MLLTFYTYIIMTSTMFLMIKLLETNK--- 226
Cdd:TIGR01770 272 LAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEgikaVLFYIFIYALMSLGAFGVLSLLRSYKdew 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 84488750 227 ---ISMMMTSWTKLPTLNTTMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLSLLNLFFYLRI 296
Cdd:TIGR01770 352 ieyISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRV 424
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
15-296 |
1.30e-15 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 77.59 E-value: 1.30e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 15 MGPLLTISSSHWILAWTGLEISTLAIIPLIAKQHHPRAI---------EAATKYFLTQAIASTLILFSSitnAWTSGQWN 85
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGC---ALYFGFTG 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 86 TTQMLNNIPSTIL-----------------TMALAIKLGLAPFHFWLPEVLQGVTMMTALTLTTWQKLAPLSLLVMMAqs 148
Cdd:MTH00198 276 NEGMLGTILSATLettnielrqgslgylfiTVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILLTSLV-- 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 149 MNTPLMLTLGLVSATIGGWNGLNQTQLRKIMAFSSIAHLGWMATILTLSPKLMLLTFYTYII--MTSTM--FLMIKLLE- 223
Cdd:MTH00198 354 ITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVtyLVSALasFTVICTLEe 433
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 224 ----------------TNKISMMMTSWTKL----PTLNTTMMLTLMSLAGLPPLTGFMPKWLIIQELTK---QHMLIIAT 280
Cdd:MTH00198 434 fgtrtptsrqrdgsfgNYNLVRRLVDLTILsrgqPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKiafSSSLSIYY 513
|
330 340
....*....|....*....|
gi 84488750 281 MMALLSLL----NLFFYLRI 296
Cdd:MTH00198 514 LVALFAIIctciSAFYYIRI 533
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
38-288 |
5.36e-14 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 72.42 E-value: 5.36e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 38 LAIIP---LIAKQHHPRAIEAATKYFLTQAIASTLILFSSITNAWTSGQWN---TTQMLNNIPSTI-------LTMALAI 104
Cdd:COG1008 142 LMLIPmyfLIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTfdiAELAAAPLPLTAqlllflaFFIAFAV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 105 KLGLAPFHFWLPE-----------VLQGVTMmtaltlttwqKLAPLSLLVMM------AQSMNTPLMLTLGLVSATIGGW 167
Cdd:COG1008 222 KVPMFPFHTWLPDahveaptagsvLLAGVLL----------KMGGYGLLRFAlplfpeASAYFAPLLAALGVIGIIYGAL 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 168 NGLNQTQLRKIMAFSSIAHLGWMAT-ILTLSPKLM---LLTFYTYIIMTSTMFLMIKLLE----TNKISMMMTSWTKLPT 239
Cdd:COG1008 292 VALAQTDLKRLIAYSSVSHMGFVLLgIFALNPLGLqgaVLQMVSHGLITAALFLLVGVLYdrthTRDIADLGGLAKRMPV 371
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 84488750 240 LNTTMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIiaTMMALLSLL 288
Cdd:COG1008 372 LAALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWL--AILAALGLI 418
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-268 |
1.88e-12 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 68.04 E-value: 1.88e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 50 PRAIEAATKYFLTQAIASTLILFSSITNAWTSGQWNTTQMLNNIPSTILT---------MALAIKLGLAPFHFWLPEV-L 119
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTFDLLELLNLPLPFGVqtwlflaffIAFAVKVPLFPLHTWLPDAhV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 120 QGVTMMTALTLTTWQKLAPLSL----LVMMAQSMN--TPLMLTLGLVSATIGGWNGLNQTQLRKIMAFSSIAHLGWMAT- 192
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTYGFlrfnLPLFPDASLyfAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLg 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 193 ILTLSPKLMLLTFYTYI---IMTSTMFLMIKLLE----TNKISMMMTSWTKLPTLNTTMMLTLMSLAGLPPLTGFMPKWL 265
Cdd:TIGR01972 312 IFSFNELGISGAVFQMIshgLITAALFLLVGVLYerahTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFL 391
|
...
gi 84488750 266 IIQ 268
Cdd:TIGR01972 392 ILL 394
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-300 |
1.11e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 65.67 E-value: 1.11e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 33 LEISTLAIIPLIAKQHHPRAIEAATKYFLTQAIASTLILFSSITNAWTSGQWNTTQMLNNIPST--------ILTMALAI 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALAENptvvtafgFVLLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 105 KLGLAPFHFWLPE-----------VLQGVTMMTALTLTTWQKLAPLSLLVMMAQSMNTPLMlTLGLVSATIGGWNGLNQT 173
Cdd:PRK08375 215 KAAVFPLHTWLPRaypaappvvtaLLSGLVTKVAVYALIRIYFTVFGGDFRFALGLGWLLA-VLALLSMLVGSLAALGQD 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 174 QLRKIMAFSSIAHLGWMATILTLSPKLMLL--TFYT--YIIMTSTMFLMIKLLE----TNKISMMMTSWTKLPTLNTTMM 245
Cdd:PRK08375 294 DVKRVLAYSTVSQMGYILLGLALLTPLALAagLLHLlhHALMKGALFLAAGAIEvtygTRRLSELSGLGRRMPLTAAAFA 373
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 84488750 246 LTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLSLLNLFFYLRISYYA 300
Cdd:PRK08375 374 VASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRA 428
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-291 |
2.43e-11 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 64.79 E-value: 2.43e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 48 HHPRAIEAATKYFLTQAIASTLILFSSITNAWTSGQWNTTQMLNNIP-----STILTMALAI------KLGLAPFHFWLP 116
Cdd:COG1009 156 EKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPtilssPLLTLILLLLllgafgKSAQFPLHFWLP 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 117 E-----------------VLQGVTMMTaltlttwqKLAPLSLLVMMAQSmntpLMLTLGLVSATIGGWNGLNQTQLRKIM 179
Cdd:COG1009 236 DamegptpvsallhaatmVKAGVYLLA--------RLSPLFALSPVWLT----VVAIIGAITALFAALIALAQTDIKRVL 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 180 AFSSIAHLGWMATILTLS-PKLMLLTFYTYIIMTSTMFLM----IKLLETNKISMMMTSWTKLPTLNTTMMLTLMSLAGL 254
Cdd:COG1009 304 AYSTVSQLGYMFLALGVGaYVAALFHLLTHAFFKALLFLGagsvIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGI 383
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 84488750 255 PPLTGFMPKWLIIQELTKQH-----MLIIATMMALLSLLNLF 291
Cdd:COG1009 384 PPFAGFFSKEAILEAALEAGglgplLLAVALLGAFLTAFYSF 425
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
48-298 |
2.71e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 64.61 E-value: 2.71e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 48 HHPRAIEAATKYFLTQAIASTL------ILFSSI-------TNAWTSGQWNTTQM---LNNIPSTILTMALA-----IKL 106
Cdd:PRK12667 158 DRGDAVEAAIKYALIGAVGTTLyflalaFLYATFgtlnmadLSAKIRGLSFPLTGglaGNPPLALGVALALAlwaftIKA 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 107 GLAPFHFWLPEV-----------LQGVTM---------MTALTLTTWQKLAPLSLLVMmaqsmntPLMLTLGLVSATIGG 166
Cdd:PRK12667 238 AIFPNHFWLPDAhpaapspvsamLSGLVVnvgayaiirFLYTIFGISPSLIDFRAALS-------PILIILGAVSAIIGA 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 167 WNGLNQTQLRKIMAFSSIAHLGWMATILTLSPKLMLLTFYTYII----------MTSTMFlmIKLLETNKISMMMTSWTK 236
Cdd:PRK12667 311 LMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIInhaiaksllfLASGVF--IHAAGTRDIDELAGLGRK 388
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 84488750 237 LPTLNTTMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLSLLNLFFYLRISY 298
Cdd:PRK12667 389 MPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWY 450
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
36-298 |
2.83e-11 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 64.63 E-value: 2.83e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 36 STLAIIPLIAKqhhpRAIEAATKYFLTQAIASTLILFSSITNAWTSGQWNTT---QMLNNIPSTILTMALAI-------- 104
Cdd:PRK08668 133 SSFMMVPMGKK----ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFAdisQGLINDTSTGFALIVFLfllafgva 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 105 KLGLAPFHFWLPE-----------VLQGVTMMT--ALTLTTWQKLAPLSLLVMMAQSMNTPL----MLTLGLVSATIGGW 167
Cdd:PRK08668 209 KAGIFPLHVWAPDayseapqsfsaVLSGQLSKLgaYGFLLVLYVLPGTKLFSEFGTYRGVPLfnyiLAWLGNISIIVGTL 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 168 NGLNQTQLRKIMAFSSIAHLGW----MATILTLSPKLMLLTFYTYIIMTSTMFLMIKLL----ETNKISMMMTSWTKLPT 239
Cdd:PRK08668 289 MAILQEDIKKLIAYSSVANGGYilvgLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAViyrtGTTKISEMGGLIEKMPF 368
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 84488750 240 LNTTMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLSLLNLFFYLRISY 298
Cdd:PRK08668 369 TFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFLYVFRPLA 427
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
5.45e-10 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 60.45 E-value: 5.45e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 50 PRAIEAATKYFLTQAIASTLILF-SSITNAWTSGQWNTTQMLNNI---PSTILTMAL-------AIKLGLAPFHFWLPEV 118
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGSTQLSAIALALitsPSLGLALALvfviagiAFKISAVPFHQWTPDV 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 119 LQGVTMMTALTLTTWQKLA----PLSLLVMMAQSMNTP---LMLTLGLVSATIGGWNGLNQTQLRKIMAFSSIAHLGWMA 191
Cdd:PRK02504 237 YEGSPTPVVAFLSVGSKAAgfalAIRLLVTAFPSFDEQwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVM 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 192 TILTLSPK----LMLLTFYTYIIMTSTMFLMIKLLE----TNKISMMMTSWTKLPTLNTTMMLTLMSLAGLPPLTGFMPK 263
Cdd:PRK02504 317 IGLVAGTEagyaSMVFYLLAYLFMNLGAFACVILFSlrtgTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-316 |
8.92e-10 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 59.63 E-value: 8.92e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 51 RAIEAATKYFLTQAIASTLILF---------------SSITNAWTSgqwntTQMLNNIPSTI----LTMALAIKLGLAPF 111
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVYgfswlyglsggeielQEIVNGLIN-----TQMYNSPGISIalifITVGIGFKLSLAPF 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 112 HFWLPEVLQGVTMMTALTLTTWQKLAPLSLLVMMaqsMNTP----------LMLTLGLVSATIGGWNGLNQTQLRKIMAF 181
Cdd:CHL00049 234 HQWTPDVYEGSPTPVVAFLSVTSKVAASALATRI---FDIPfyfssnewhlLLEILAILSMILGNLIAITQTSMKRMLAY 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 182 SSIAHLGW-MATILTLSPKL----MLLTFYTYIIMTSTMFLMIKLLE----TNKISMMMTSWTKLPTLNTTMMLTLMSLA 252
Cdd:CHL00049 311 SSIGQIGYvIIGIIVGDSNDgyasMITYMLFYIFMNLGTFACIVLFGlrtgTDNIRDYAGLYTKDPFLALSLALCLLSLG 390
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 84488750 253 GLPPLTGFMPKWLIIQELTKQHMLIIATMMALLSLLNLFFYLRISYYATITLSPNSTNYLQQWR 316
Cdd:CHL00049 391 GIPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKIIKLLMTGRNQEITPYVRNYR 454
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
38-266 |
1.04e-09 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 59.71 E-value: 1.04e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 38 LAIIPL---IAKQHHPRAIEAATKYFLTQAIASTLILFSSITNAWTSGQWN-------------TTQMLNNIPstiLTMA 101
Cdd:PRK06473 138 LELIPLyllIAIWGGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGASSfdyeplrshtlplSTQLLLLAP---ILVG 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 102 LAIKLGLAPFHFWLPEV-LQGVTMMTALTLTTWQKLAPLSLL------VMMAQSMNTPLMLTLGLVSATIGGWNGLNQTQ 174
Cdd:PRK06473 215 FGIKIPLVPFHTWLPDAhVEASTPVSVLLAGVLLKLGTYGLLrfgvglFPEAWVYLAPWLATWAVVSVLYGASCAIAQKD 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 175 LRKIMAFSSIAHLGWM----ATILTLSPKLMLLTFYTYIIMTSTMFLMIKLL-------ETNKISMMMTSWTKLPTLNTT 243
Cdd:PRK06473 295 MKKMVAYSSIGHMGYIllaaAAATPLSILAAVFQMISHGLISALLFLLVGVVykktgsrDVDVLRGLLNPERGLPITGSL 374
|
250 260
....*....|....*....|...
gi 84488750 244 MMLTLMSLAGLPPLTGFMPKWLI 266
Cdd:PRK06473 375 MILGVMASAGIPGMVGFIAEFLV 397
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-338 |
5.18e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 57.41 E-value: 5.18e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 33 LEISTLAIIPLIAKQHH-PRAIEAATKYFLTQAIASTLILFSSitnAWTSGQWNTTQM-------------LNNIPSTIL 98
Cdd:PRK08376 150 LEIMSIASYALVAFRNDtWEAIEAGIKYMFVGSLASSMVLLGI---ALLYGQYGTLNMaylavkmsenptvVAKIALALF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 99 TMALAIKLGLAPFHFWLPEVlQGVTMMTALTLTTWQKLAPLSLLVMMAQSMNTP---------LMLTLGLVSATIGGWNG 169
Cdd:PRK08376 227 IAGLAMKSGAVPVHMWLPDA-YPAAPSSISAMLLVIKQAGLYALARVLFSIYGPainlatvgwVIIILGCLTMFVGVAMA 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 170 LNQTQLRKIMAFSSIAHLGWM-----ATILTLSPKLM-----------LLTFYTYIIMTSTMFL----MIKLLETNKISM 229
Cdd:PRK08376 306 VVQKDVKRLLAYHSVSQIGYMllglgVGLAALGDPAMasygeialaggIYHIVNHALYKALLFLtagaVIYETGTRNLNE 385
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 230 MMTSWTKLPTLNTTMMLTLMSLAGLPPLTGFMPKWLIIqELTKQHMLIIATMMALLSLLNLFFYLRIsyYATITLSPNST 309
Cdd:PRK08376 386 LGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIY-ESSALFNPILGVIAMIGSVLTLASFVKV--FHTAFFGPPSE 462
|
330 340
....*....|....*....|....*....
gi 84488750 310 NYLqqwRHKTNQKYYLAPMTTLSITLLPM 338
Cdd:PRK08376 463 KVM---NVKEPPKPMLVPMLILAIAIIGM 488
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
28-263 |
1.66e-08 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 56.20 E-value: 1.66e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 28 LAWtglEISTLAIIPLIAKQHhPRAIEAATKYFLTQAIASTLILFSSITNAWTSGqwnTTQMLNNIPSTI------LTMA 101
Cdd:PRK12650 137 VAW---ELVSLASFFLIARSG-SGGEAGSIRTLILTFFGGLTLLAAVAIAATQTG---TTSLSGILHSDVwaekpgLTTV 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 102 LAIKLGLA--------PFHFWLPEVLQGVTMMTALTLTTWQKLAPLSLLVMMAQSM-NTP----LMLTLGLVSATIGGWN 168
Cdd:PRK12650 210 VAVLIAVAaftksaqfPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFhDVAvwnwLLIIVGMITALMGAVF 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 169 GLNQTQLRKIMAFSSIAHLGWM-ATILTLSPKLM---LLTFYTYIIMTSTMFLMIKLLE----TNKISMMMTSWTKLPTL 240
Cdd:PRK12650 290 AVQKTDLKKLTAYSTVSQLGWIvATIGVGTPFALtaaVVHTLAHALFKSSLFMLIGVVDhqagTRDIRRLGSLWRRMPFT 369
|
250 260
....*....|....*....|...
gi 84488750 241 NTTMMLTLMSLAGLPPLTGFMPK 263
Cdd:PRK12650 370 FVSVTIAALSMAAVPPLFGFVSK 392
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
18-285 |
1.84e-08 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 55.71 E-value: 1.84e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 18 LLTISSSHWILAWTGLEISTLAIIPLIAKQHHPRAIEAATKYFL------TQAIASTLILFSSITNAWTSGQ----W-NT 86
Cdd:PRK06458 122 LLALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIicsvgvAFALFGTILVYANAATVMGDGEmailWtEL 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 87 TQMLNNIPSTILTMALAI-------KLGLAPFHFWLPE-----------VLQGVTMMTALtlttwqkLAPLSLLVMMAQS 148
Cdd:PRK06458 202 LKHASLLDPTLMKLAFVFlligfgtKVGLFPMHAWLPDahseapspvsaLLSGVLLNVAL-------YAVLRYYILIDAA 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 149 MNT----PLMLTLGLVSATIGGWNGLNQTQLRKIMAFSSIAHLGWMATILTLSPKLMLLTFYTYIIMTS--------TMF 216
Cdd:PRK06458 275 IGSdfpgRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSltksaiffASG 354
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 84488750 217 LMIKLLETNKISMMMTSWTKLPTLNTTMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMALL 285
Cdd:PRK06458 355 NVLQKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAILLLLL 423
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
53-267 |
3.37e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 51.85 E-value: 3.37e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 53 IEAATKYFLTQAIASTLILFS--SITNAWTSGQWNTTQMLNNIPSTILT--------MALAIKLGLAPFHFWLPE----- 117
Cdd:MTH00226 181 MQAAYYFFFYTLIGSVLMLLClfSLYNIHGTTDYLTLASCSHVVSEQTQkwiflgifLAMAVKIPIFPFHIWLPKahvea 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 118 -VLQGVTMMTALTLTTWQKLAPLS--LLVMMAQSMnTPLMLTLGLVSATIGGWNGLNQTQLRKIMAFSSIAHLGwMATIL 194
Cdd:MTH00226 261 pVAGSVLLAGILLKLGGYGLVRLSwpILPLGAQNL-APAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMG-LVSIT 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 195 TLSPKLMLLTFYTYI-----IMTSTMFLMIKLL----ETNKISMMMTSWTKLPTLNTTMMLTLMSLAGLPPLTGFMPKWL 265
Cdd:MTH00226 339 LVTHDIIGLTGSIFImlahgIVSSLLFILVTILydrhHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYL 418
|
..
gi 84488750 266 II 267
Cdd:MTH00226 419 SI 420
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
55-268 |
1.31e-06 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 49.71 E-value: 1.31e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 55 AATKYFLTQAIASTLILFSSITNAWTSGQWN------TTQMLNNIPSTILTMAL----AIKLGLAPFHFWLPEV-LQGVT 123
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSfdydaiSTQNLSLNTQLILLTGLllgfGIKIPLVPLHTWLPDAyTEASP 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 124 MMTALTLTTWQKLAPLSLLVMMAQ------SMNTPLMLTLGLVSATIGGWNGLNQTQLRKIMAFSSIAHLGWMATILTLS 197
Cdd:PRK07363 238 AVAILLGGVLAKLGTYGLLRFGLQlfpqtwSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAG 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 198 PKLMLL----TFYTYIIMTSTMFLMIKLLET-------NKISMMMTSWTKLPTLNTTMMLTLMSLAGLPPLTGFMPKWLI 266
Cdd:PRK07363 318 TQLSLLgavaQMISHGLILALLFHLVGIVERkvgtrdlDVLNGLMNPIRGLPLTSALLVLAGMASAGIPGLVGFVAEFIV 397
|
..
gi 84488750 267 IQ 268
Cdd:PRK07363 398 FQ 399
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-340 |
1.37e-06 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 44.56 E-value: 1.37e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 84488750 291 FFYLRISYYATITLSPNSTNYLQQWRHKTNQKYY-LAPMTTLSITLLPMTP 340
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTLlLPTLTTLSILLLPLTP 51
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
80-263 |
1.57e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 49.92 E-value: 1.57e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 80 TSGQWNTTQMLNNIPST---------ILTMALAiKLGLAPFHFWLPEVLQGVTmmtaltlttwqklaPLS---------- 140
Cdd:PRK12644 183 AAGTYRLSELLADPPTGpavsvavvlILVGALS-KSAIVPFHFWLPGAMAAPT--------------PVSaylhaaamvk 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 141 ----LLVMMAQSMNT-----PLMLTLGLVSATIGGWNGLNQTQLRKIMAFSSIAHLGWMATILTLSPKLMLLTFYTYII- 210
Cdd:PRK12644 248 agiyLVARLAPGFADvpvwrPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLa 327
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 211 ---MTSTMFLMIKLLE----TNKISMMMTSWTKLPTLNTTMMLTLMSLAGLPPLTGFMPK 263
Cdd:PRK12644 328 halFKAALFLVVGIIDhstgTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-344 |
2.06e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 49.26 E-value: 2.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 34 EISTLAIIPLIAKQHHPRAIEAATKYFLTQAIASTLILFSSITNAWTSGQWNTTQM----LNNIPSTILTMALAIKL--- 106
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDIhnalLVNPTSPVIYGGLLLLIfgl 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 107 ----GLAPFHFWLPEVLQGVTMMTALTLTTWQKLAPLSLLVMMAQSMNTP--------LMLTLGLVSATIGGWNGLNQTQ 174
Cdd:PRK06277 210 lygsGLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIFKLFGGLsyfpsaqgVLIALSVLAMVFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 175 LRKIMAFSSIAHLGWMATILTLSPKLM----LLTFYTYIIMTSTMFLMIKLLE----TNKISMMMTSWTKLPTLNTTMML 246
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGivagIFHAINHVIYKSALFLGAGIVSyrtkTSNLRKLGGLLPVMPVVAFMVLC 369
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 247 TLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLSLLNLFFYLRISYyaTITLSPNSTNylQQWRHKTNQKYYLA 326
Cdd:PRK06277 370 AKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFY--LIYLKPKPEE--LEYKNKKVPKYAVF 445
|
330 340
....*....|....*....|
gi 84488750 327 PMTTLSI--TLLPMTPTLLT 344
Cdd:PRK06277 446 SLAVLTIlcIILGLFPDLVT 465
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
34-267 |
3.33e-06 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 48.66 E-value: 3.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 34 EISTLAIIPLIAKQHHPRAIEAATKYFLTQAIASTLILFSSITNAWTS----GQWNTTQMLN-NIPSTILT-------MA 101
Cdd:PRK05846 141 EAMLIPMYFLIGVWGGKNRIYAATKFFLYTLLGSLLMLVAIIYLVVVYynatGTFDIADLLNlPLPPGVQYwlflaffIA 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 102 LAIKLGLAPFHFWLPE-----------VLQGVTMmtaltlttwqKLAPLSLLVMM------AQSMNTPLMLTLGLVSATI 164
Cdd:PRK05846 221 FAVKMPMFPLHTWLPDahvqaptagsvLLAGILL----------KMGAYGLLRFSlplfpdASHEFAPIIITLGVIAIIY 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 165 GGWNGLNQTQLRKIMAFSSIAHLGWM------ATILTLSPklmlLTFYT--YIIMTSTMFLMIKLLE----TNKISMMMT 232
Cdd:PRK05846 291 GALVALAQTDIKKLIAYSSISHMGFVtlgifaGNQLGIQG----AIFQMisHGLSSAALFLLVGVLYdrlhTRDIADYGG 366
|
250 260 270
....*....|....*....|....*....|....*
gi 84488750 233 SWTKLPTLNTTMMLTLMSLAGLPPLTGFMPKWLII 267
Cdd:PRK05846 367 LAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLIL 401
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
13-287 |
4.58e-06 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 48.30 E-value: 4.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 13 LIMGPLL-TISSSHWILAWTGLEISTLAIIPLIAKQHH-PRAIEAATKYFLTQAIASTLILFSSITNAWTSGQWNTTQML 90
Cdd:TIGR00940 114 AFMGAMLgVVLSDNLILLYVFWELTSIVSFLLISYWHHrAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIDAVI 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 91 NN----------IPSTILTMALAI-KLGLAPFHFWLPEVLQGVTMMTALTLTTWQKLAPLSLLVMMAQSM-NTP----LM 154
Cdd:TIGR00940 194 ASadairnsplfGTAMVLVLLGAFtKSAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFaGTEawfwIV 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 155 LTLGLVSATIGGWNGLNQTQLRKIMAFSSIAHLGWMATILTL-SPKLMLLTFYTYIIMTSTMFLMIKLLE--TNKISMMM 231
Cdd:TIGR00940 274 GLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGLgSPSYHYQGDDSKIYALAAVAAVFHLINhaTFKGSLFM 353
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 84488750 232 TS------------------WTKLPTLNTTMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLSL 287
Cdd:TIGR00940 354 AAgiidhetgtrdirklgglFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAEAITAHLVNPFDTVTLGYL 427
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-308 |
9.39e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 47.25 E-value: 9.39e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 33 LEISTLAIIPLIAKQHHPRAIEAATKYFLTQAIASTLILFSSITNAWTSGQWNTTQMLNNIP--STILTMALAIKLGLAP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATADPeaFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 111 FHFWLPE-----------VLQGVTMMTALTLttwqkLAPLSLLVmmaqSMNTPLMLTLGLVSATIGGWNGLNQTQLRKIM 179
Cdd:PRK07234 203 SGLWLPLthseaeppvsaLLSGVVVKAGVFP-----LVRCALDV----PGLDLIVRIFGVGTALLGVLFALLEKDLKRML 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 180 AFSSIAHLGWmatILtLSPKLMLLTFYTYIIMTSTMFLMIKLLE----TNKISMMMTSWTKLPtlnttMMLTLMSLAGLP 255
Cdd:PRK07234 274 AFSTISQLGF---IL-AAPLVGGLYALAHGLVKSTLFLCAGALPsrnfTELISQMLGIGKWIP-----LTMASFSIAGFP 344
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 84488750 256 PLTGFMPKWLIIQELTKQHMLiiatmmallsLLNLFFYLRISYYATITLSPNS 308
Cdd:PRK07234 345 LLAGFVSKVLTLKNLLPWQAI----------ALNLAAVGTAASFWKFIFLPFS 387
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
111-309 |
1.73e-05 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 46.61 E-value: 1.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 111 FHFWLPEVLQGVTMMTALTLTTWQKLAPLSLLVMMAQSMN-TPLML----TLGLVSATIGGWNGLNQTQLRKIMAFSSIA 185
Cdd:MTH00020 229 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEqAPLALiivtIVGSLTVFFAATVGLVQNDLKKVIAYSTCS 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 186 HLGWMATILTLSP------KLMLLTFYTYIIMTSTMFLMIKLLETNKISMMMTSWTKLPTLNTTMMLTLMSLAGLPPLTG 259
Cdd:MTH00020 309 QLGYMVVACGLSHysislfHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTG 388
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 84488750 260 FMPKWLIIQELTKQHMLIIATMMALLS-LLNLFFYLRISYYATITlSPNST 309
Cdd:MTH00020 389 FYSKDLILELAFGQYYLIFAYWLGCFSaLLTAFYSIRLIYLTFLS-NTNLK 438
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-296 |
2.45e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 45.88 E-value: 2.45e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 33 LEISTLAIIPLIAKQHHPRAIEAATKYFLTQAIASTLILFSSITNAWTSGQWNTTQML--------NN---IPSTILTMA 101
Cdd:PRK12662 139 LEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFliiqdlptNRaiqIGVLFIMVG 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 102 LAIKLGLAPFHFWLPEV-----------LQGVTMMTALTLTTWQKLAPLSLLVMMAQSMNTPLMLTLGLVSATIGGWNGL 170
Cdd:PRK12662 219 LFIKAALFPFHKWLIQAyseapsfisvfFSGTSTKVMIYLIIRIVYDVFKANFVFTTLPFNNVFMILAALAIVFGSVLAI 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 171 NQTQLRKIMAFSSIAHLGWMATILTLSPKLMLLTFYTYII----MTSTMFLMIKLLE----TNKISMMMTSWTKLPTLNT 242
Cdd:PRK12662 299 LSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVnhsiVKSALFMVSGSISyhfgTTKLEDCLNLWKSMPKITL 378
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 84488750 243 TMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLSLLNLFFYLRI 296
Cdd:PRK12662 379 AFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKI 432
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
110-266 |
2.52e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 46.07 E-value: 2.52e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 110 PFHFWLPEVLQGVTMMTALTLTTWQKLAPLSLLVMMAQSM-NTPL-MLTLGLVSAT---IGGWNGLNQTQLRKIMAFSSI 184
Cdd:PRK12647 213 PFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLgGTPLwQTILPLFGGLtmlTGALLAVRQTDLKLILAYSTV 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 185 AHLGWMATILTLSPKLMLLTFYTYIIMTS----TMFLMIKLLE----TNKISMMMTSWTKLPTLNTTMMLTLMSLAGLPP 256
Cdd:PRK12647 293 SALGTLVMLLGLGSELAIKAAVLFLVAHSlykgALFMVAGIIDhetgTRDITKLGGLRRAMPITAAAALLAALSMAGLPP 372
|
170
....*....|
gi 84488750 257 LTGFMPKWLI 266
Cdd:PRK12647 373 LFGFLAKELI 382
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
28-188 |
3.88e-05 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 45.41 E-value: 3.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 28 LAWtglEISTLAIIPLIAKQHHPRAIEAATKYFLTQAIASTLILFSSITNAWTSGQ--WNTTQM-LNNIPSTI------- 97
Cdd:PRK12561 114 LMW---ELELVPVYLLISIWGGQKRLYAATKFILYTALASIFILVAGLALALSGDTftFDLAELgAKSYPLALelllyag 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 98 LTMALAIKLGLAPFHFWLPE-----------VLQGVTMmtaltlttwqKLAPLSLLVMMAQSMN------TPLMLTLGLV 160
Cdd:PRK12561 191 FLIAFGVKLPIFPLHTWLPDahgeasapvsmILAGVLL----------KMGGYALIRFNVQMLPdahvyfAPALAILGVV 260
|
170 180
....*....|....*....|....*...
gi 84488750 161 SATIGGWNGLNQTQLRKIMAFSSIAHLG 188
Cdd:PRK12561 261 NIIYGALNAFAQDNVKRRLAYSSVSHMG 288
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
28-287 |
4.49e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 45.13 E-value: 4.49e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 28 LAWTGLEISTLAIIPLIAKQHHPRAIEAATKYFLtqaIAST---------LILFSSITNAWTSGQWNTTQMLNNIP---S 95
Cdd:PRK08676 126 LFWIFAELTTVFSAMLIAILSARENIDAALKYIF---IASTamifafiglIFLFSLTRQALGTGTLNWTELAAHASllsP 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 96 TILTMA-------LAIKLGLAPFHFWLPEVL----QGVTMMTALTLTTWQKLAPLSLLVMMAQS----MNTPLMLTLGLV 160
Cdd:PRK08676 203 SVLGASflfifigFLAKSGLVPFHTWLPAAYakapSVVSALLSGTVLNIGIYGILRLSALLRQSgaaeQFSNVLIGLGIF 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 161 SATIGGWNGLNQTQLRKIMAFSSIAHLGWMATILTLSPKL----MLLTFYTYIIMTSTMFLMIKLLE----TNKISMMMT 232
Cdd:PRK08676 283 SIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLalfwMLFHMLAHSLVKSGLFFSAGILHrqyrSDRFDRIFD 362
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 84488750 233 SWTKLPTLNTTMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLSL 287
Cdd:PRK08676 363 VFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLL 417
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
139-300 |
6.18e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 44.55 E-value: 6.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 139 LSLLVMMAQSMNTPLMLTLGLVSATIGGWNGLNQTQLRKIMAFSSIAHLGWM-ATILTLSPKLMLLTFYTYI---IMTST 214
Cdd:PRK07691 263 FTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVIlVGVAMMTESGMIGAIYYLIhdmIVKAA 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 215 MFL----MIKLLETNKISMMMTSWTKLPTLNTTMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLSLLNL 290
Cdd:PRK07691 343 LFLligiMIKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVL 422
|
170
....*....|
gi 84488750 291 FFYLRISYYA 300
Cdd:PRK07691 423 YSVIKIFLKG 432
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
97-268 |
6.68e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 44.57 E-value: 6.68e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 97 ILTMALAIKLGLAPFHFWLPE-----------VLQGVTMmtaltlttwqKLAPLSL-----LVMMAQSMNTPLMLtLGLV 160
Cdd:PRK12665 214 VLLVAFGIKAAVFPLSFWLPDsyptapapvtaVFAGLLT----------KVGVYAIirthtLLFPGGGLDTLLMV-VALL 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 161 SATIGGWNGLNQTQLRKIMAFSSIAHLGWMATILTLSPKLML--LTFYT--YIIMTSTMFLMIKLLETNKISMMMTSWTK 236
Cdd:PRK12665 283 TMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLsgAIYYVahHITVQTTLFLVVGLIERQAGSSSLRRLGG 362
|
170 180 190
....*....|....*....|....*....|....*.
gi 84488750 237 L----PTLNTTMMLTLMSLAGLPPLTGFMPKWLIIQ 268
Cdd:PRK12665 363 LakasPLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
111-268 |
3.58e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 42.25 E-value: 3.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 111 FHFWLPEVLQGVTMMTALTLTTWQKLAPLSLLV----MMAQSMNTPLMLTL-GLVSATIGGWNGLNQTQLRKIMAFSSIA 185
Cdd:MTH00032 244 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIrsfpLFEKAPLTLLIITIfGALTAFFAATVGLVQNDLKKVIAYSTCS 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 186 HLGWMATILTL--SPKLMLLTFYTYIIMTSTMFL----MIKLLETNKISM--MMTSWTKLPTLNTTMMLTLMSLAGLPPL 257
Cdd:MTH00032 324 QLGYMVLIIGIegSHNVGLFHLVNHAFFKALLFLsagsVIHSTTVDEQDMrkMGGLIHSIPFTYTMMLIGSFSIMGLPYL 403
|
170
....*....|.
gi 84488750 258 TGFMPKWLIIQ 268
Cdd:MTH00032 404 TGFYSKDLILE 414
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
27-308 |
4.15e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 42.06 E-value: 4.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 27 ILAWTGLEISTLAiipLIAKQHHPRAIEAATKYFLTQAIASTLILFSSitnAWT--SGQWNTTQMLNNIPSTILTMALAI 104
Cdd:MTH00207 114 LLGWDGLGLVSFI---LVIYYQNPKSLGAGMITALTNRIGDVMLLLSI---GWTlnQGHWSITNMWQTDMNNYIALSIMI 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 105 ----KLGLAPFHFWLPEVLQGVTMMTALTLTTWQKLAPLSLLVMMAQSMN-----TPLMLTLGLVSATIGGWNGLNQTQL 175
Cdd:MTH00207 188 aamtKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSstywfNPALLLTASLTMLMAGLSAMTECDM 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 176 RKIMAFSSIAHLGWMATILTLS-PKLMLLTFYTYIIMTSTMFL----MIKL-LETNKISMMMTSWTKLPTLNTTMMLTLM 249
Cdd:MTH00207 268 KKIIALSTLSQLGVMMASLGLGmPKLALFHLITHALFKALLFVcagsLIHShHHSQDLRTMGNLTNQMPLTTSCLLIANL 347
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 250 SLAGLPPLTGFMPKWLIIQ-ELTKQHMLIIATMMALLSLLNLFFYLRISYYAtiTLSPNS 308
Cdd:MTH00207 348 ALCGSPFLSGFYSKDLILEsSLFYPHNSLMILMIFLATALTAAYSTRFTLAV--LWSPNS 405
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
107-272 |
4.23e-04 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 42.12 E-value: 4.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 107 GLAPFHFWLPEV-LQGVTMMTALTLTTWQKLAPLSLLVMMAQSMNTPL-----MLTLGLVSATIGGWNGLNQTQLRKIMA 180
Cdd:PRK08042 195 GIIPLHGWVPQAhANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLwwgvaLLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 181 FSSIAHLG--------WMATILTLSPKLMLLTF-------YTYIIMTSTMFLMIKLL----ETNKISMMMTSWTKLPTLN 241
Cdd:PRK08042 275 YHTLENIGiillglgaGVTGIALEQPALIALGLvgglyhlLNHSLFKSVLFLGAGSVwfrtGHRDIEKLGGIGKKMPVIS 354
|
170 180 190
....*....|....*....|....*....|.
gi 84488750 242 TTMMLTLMSLAGLPPLTGFMPKWLIIQELTK 272
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| ND2 |
MTH00091 |
NADH dehydrogenase subunit 2; Provisional |
100-298 |
5.44e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177154 Cd Length: 273 Bit Score: 41.01 E-value: 5.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 100 MALAIKLGLAPFHFWLPEVLQGVTMMTALTLTTWQKLAPLSLLVMMAqSMNTPLMLTLGLVSATIGGWNGLNqtqLRKIM 179
Cdd:MTH00091 65 LILMMKIGVAPFHFWIFSVTNGLFGWNLMWFLTFQKLPFLLVLLQFF-SKNFFFLLLFGLLICFFQMFLLKS---YKNLL 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 180 AFSSIAHLGWMATILTLSpklMLLTFYTYIIMTSTMFlmiklletnkisMMMTSWTKLPTLNTTMMLTLMSLAGLPPLTG 259
Cdd:MTH00091 141 ILSSTESFNWLILSFFFS---FFNVFFLFFYYFLLML------------FLIPKFNNVNKLNFVSWETLLVFMNLPFSVT 205
|
170 180 190
....*....|....*....|....*....|....*....
gi 84488750 260 FMPKWLIIQELTKQHMLiiatMMALLSLLNLFFYLRISY 298
Cdd:MTH00091 206 FFVKIFSLSEILKVLGF----FLLFLLFLMFLSVLSLSF 240
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
148-333 |
5.58e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 41.75 E-value: 5.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 148 SMNTPLMLTLGLVSATIGGWNGLNQTQLRKIMAFSSIAHLGWMATILTL-SPKLMLLTFYTYIIMTSTMFL---MIKLLE 223
Cdd:MTH00151 237 SGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLgMPSLALFHLYTHALFKALLFLcagSIIHSS 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 224 TNK--ISMMMTSWTKLPTLNTTMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLSLLNLFFY-LRISYYa 300
Cdd:MTH00151 317 SGTqdIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYsARLSFC- 395
|
170 180 190
....*....|....*....|....*....|...
gi 84488750 301 TITLSPNSTNYLQQwrhKTNQKYYLAPMTTLSI 333
Cdd:MTH00151 396 LVWGSMKSSSLSSK---SDEDFYVSLPMLLLSL 425
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
55-290 |
6.65e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 41.64 E-value: 6.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 55 AATKYFLTQAIaSTLILFSSI------TNAWTSGQWNTTQMLNNIPSTILTMALAIKLGLAPFHFWLPEVLQGVTMMTAL 128
Cdd:PRK08667 163 AGIFYFVMTQL-STVFLMLGIivlfiqTGSFELSPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSA 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 129 TLTTWQKLAPLSLLVMMAQSMNTP------LMLTLGLVSATIGGWNGLNQTQLRKIMAFSSIAHLG--------WMATIL 194
Cdd:PRK08667 242 LMSGVMLKVAVYGLVRFLMDVLSPelwwgvLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGiilmgiglYVIFGV 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 195 TLSPKLMLLTF-------YTYIIMTSTMFL----MIKLLETNKISMMMTSWTKLPTLNTTMMLTLMSLAGLPPLTGFMPK 263
Cdd:PRK08667 322 YGLDTLALLALggalfhsLNHALFKSLLFLtagsVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASE 401
|
250 260 270
....*....|....*....|....*....|.
gi 84488750 264 WLI----IQELTKQHMLIIATMMALLSLLNL 290
Cdd:PRK08667 402 LLLyesfFQSFSVADPLIKILLFSVLAIFAL 432
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
110-272 |
1.16e-03 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 40.89 E-value: 1.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 110 PFHFWLPEVLQGVTMMTALTLTTWQKLAPLSLL-----VMMAQSMNTPLMLTLGLVSATIGGWNGLNQTQLRKIMAFSSI 184
Cdd:PRK12646 228 PFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLfrftpLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTI 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 185 AHLGWMATILTL------SPKLMLLTFYTYI------------IMTSTMFLMIKLLE----TNKISMMMTSWTKLPTLNT 242
Cdd:PRK12646 308 SQLGMIMAMVGIgggyaqHQQDAIASIYVFVlfaalfhlmnhaIFKCALFMGVGIIDheagTRDIRILSGMRQLFPKMNL 387
|
170 180 190
....*....|....*....|....*....|
gi 84488750 243 TMMLTLMSLAGLPPLTGFMPKWLIIQELTK 272
Cdd:PRK12646 388 VMTIAALSMAGVPFLNGFLSKEMFLDALTQ 417
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
33-296 |
1.32e-03 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 40.52 E-value: 1.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 33 LEISTLAIIPLIAKQHHPRAIEAATKYFLTQAIASTLILfssITNAWTSGQWNTTQMLN-------------NIPSTILT 99
Cdd:PRK08377 137 MEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFL---IGVALIYGATGTLNMAHiaqlagtidptvaQVGLALLI 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 100 MALAIKLGLAPFHFWLPEVLQG------VTMMTALTLTTWQKLAPLSLLVMMAQSMN--TPLMLTLGLVSATIGGWNGLN 171
Cdd:PRK08377 214 FGLAVEAELFPLNAWAPDAYQAaphpitVMFSAFVVKAGLYAMARILYLMQNANGWSsvLKLVIIMATLTVFFAELSALR 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 172 QTQLRKIMAFSSIAHLGWMATILTLSPKL----MLLTFYTYIIMTSTMFL----MIKLLETNKISMMMTSWTKLPTLNTT 243
Cdd:PRK08377 294 QKNVKRMIAYSSIGQVGMIALALALGTQAgvdaGVFHMINHAIVKALLFLavgyVGITLGGTEIEKFEGLGKRMPLTALA 373
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 84488750 244 MMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLSLLNLFFYLRI 296
Cdd:PRK08377 374 LTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVEAVYYFRL 426
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
27-270 |
1.88e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 40.16 E-value: 1.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 27 ILAWTGLEISTLAIIPLIAKQHHPraieaATKYFLTQAIASTLILFSSITNAWTSGQWNTTQMLNNIPSTILTMALAIKL 106
Cdd:PRK06459 98 LAGWEIMTIPSYVAIALTKKNKRP-----AFVFMAFGELSTVLILAGFAWAFIISGTTNFSYLPSPVPLILASFGFIIKM 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 107 GLAPFHF--WLPEVLQGVTMMTALTLTTWQKLAPLSLLVMMAQ-SMNTP------LMLTLGLVSATIGGWNGLNQTQLRK 177
Cdd:PRK06459 173 GMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTIlTQTIPigyfglTILAIGAFSILFGALYAYVSENVKG 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 178 IMAFSSIAHLGWMATIL----------TLSPKLMLLTFYTYIIMTST----MFLMIKLLETNKISMMMTSWTKLPTLNTT 243
Cdd:PRK06459 253 LLAFSTIENNGAILVALglymvtkqliTSIEHFSLITVILYSFAHSVaktgLFLSSGLQEKQSITYSKKIRNRWIELGLT 332
|
250 260
....*....|....*....|....*..
gi 84488750 244 MMltLMSLAGLPPLTGFMPKWLIIQEL 270
Cdd:PRK06459 333 LL--ASSLSGLLPNIGGVASWLLLESL 357
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
153-299 |
1.97e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 40.01 E-value: 1.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 153 LMLTLGLVSATIGGWNGLNQTQLRKIMAFSSIAHLGWMATILTL-SPKLMLLTFYTYIIMTSTMFL----MI-KLLETNK 226
Cdd:MTH00209 241 SLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLnQPELAFFHLITHALFKALLFIcagnIIhSHGHSQD 320
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 84488750 227 ISMMMTSWTKLPTLNTTMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLSL-LNLFFYLRISYY 299
Cdd:MTH00209 321 IRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTsLTAAYSMRLSYF 394
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
150-303 |
3.45e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 39.22 E-value: 3.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 150 NTPLMLT----LGLVSATIGGWNGLNQTQLRKIMAFSSIAHLGWMATILTLSP------KLMLLTFYTYIIMTSTMFLMI 219
Cdd:MTH00210 270 GSPLALTivtiLGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNystslfHLMNHAFFKALLFLSAGSVIH 349
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 220 KLLETNKISMMMTSWTKLPTLNTTMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLS-LLNLFFYLRISY 298
Cdd:MTH00210 350 AVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSaLLTAFYSIRLIY 429
|
....*
gi 84488750 299 YATIT 303
Cdd:MTH00210 430 LTFIT 434
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
100-188 |
3.65e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 38.88 E-value: 3.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 100 MALAIKLGLAPFHFWLPE-----------VLQGVTMmtaltlttwqKLAPLSL------LVMMAQSMNTPLMLTLGLVSA 162
Cdd:MTH00217 214 LSLAIKIPKIPFHIWLPQahveapvagsvILAGVLL----------KLGGYGFirfswpLLPEASEYFSPLIQTLSLLAI 283
|
90 100
....*....|....*....|....*.
gi 84488750 163 TIGGWNGLNQTQLRKIMAFSSIAHLG 188
Cdd:MTH00217 284 IYGSLTTCRQVDLKRIIAYSSVAHMG 309
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
152-300 |
9.44e-03 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 37.62 E-value: 9.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 152 PLMLTLGLVSATIGGWNGLNQTQLRKIMAFSSIAHLGWM-ATILTLSPKLMLLT-FYtyiiMTSTMFLMIKLLETNKISM 229
Cdd:PRK12663 273 PLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFIlLGLALGTPAGINGAiFY----LVHDMVVKTALFLIAGSLV 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488750 230 MMTSWTKLPTLN-----------TTMMLTLmSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLSLLNLFFYLRISY 298
Cdd:PRK12663 349 RLTGYRSLQYLGglyrkeplfgaLFLILIF-AIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSLFRIFF 427
|
..
gi 84488750 299 YA 300
Cdd:PRK12663 428 LA 429
|
|
| |
