|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-438 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 671.52 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 1 MLKIILPMIMLLPTTLLSPPKFLWINTTMYSTLIASLSFQWLLPTYYPHKHLTNWTGIDHISSPLLTLTCWLLPLMILAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 81 QSHLQHEPLARKRTFIATLVTIQPFIVLAFSATELTLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 161 LVSLLHLHTWTGTLSLPILQLVHPLLTNSWPGLLSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 241 YGIMRITFMTTPLSNHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQTSWSFSGAMILMISHG 320
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 321 LTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIALFHWSTPTIILTGTAT 400
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430
....*....|....*....|....*....|....*...
gi 94490691 401 LLTASYTLFMLLTTQRGTLPPYLTSIQNSNTREHLLMA 438
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMT 438
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-438 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 546.05 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 1 MLKIILPMIMLLPTTLLSPPKFLWINTTMYSTLIASLSFQWLLPTYYPHKHLTNWTGIDHISSPLLTLTCWLLPLMILAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 81 QSHLQHEPLARKRTFIATLVTIQPFIVLAFSATELTLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 161 LVSLLHLHTWTGTLSLPILQLVHPLLTNSWPGLLSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 241 YGIMRITFMTTPLSNHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQTSWSFSGAMILMISHG 320
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 321 LTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIALFHWSTPTIILTGTAT 400
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430
....*....|....*....|....*....|....*...
gi 94490691 401 LLTASYTLFMLLTTQRGTLPPYLTSIQNSNTREHLLMA 438
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLA 438
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-438 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 542.56 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 1 MLKIILPMIMLLPTTLLSPPKFLWINTTMYSTLIASLSFQWLLPTYYPHKHLTNWTGIDHISSPLLTLTCWLLPLMILAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 81 QSHLQHEPLARKRTFIATLVTIQPFIVLAFSATELTLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 161 LVSLLHLHTWTGTLSLPILQLVHPLLTNSWPGLLSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 241 YGIMRITFMTTPLSNHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQTSWSFSGAMILMISHG 320
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 321 LTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIALFHWSTPTIILTGTAT 400
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430
....*....|....*....|....*....|....*...
gi 94490691 401 LLTASYTLFMLLTTQRGTLPPYLTSIQNSNTREHLLMA 438
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMA 438
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-438 |
5.73e-157 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 452.49 E-value: 5.73e-157
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 1 MLKIILPMIMLLPTTLLSPPKFLWINTTMYSTLIASLSFQWL-LPTYYPHKHLTNWTGIDHISSPLLTLTCWLLPLMILA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLkNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 80 SQSHLQHEPLARKRTFIATLVTIQPFIVLAFSATELTLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 160 LLVSLLHLHTWTGTLSLPILQLVHPLLTNSWPGLLSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLG 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 240 GYGIMRITFMTTPLSNHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQTSWSFSGAMILMISH 319
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 320 GLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIALFHWSTPTIILTGTA 399
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430
....*....|....*....|....*....|....*....
gi 94490691 400 TLLTASYTLFMLLTTQRGTLPPYLTSIQNSNTREHLLMA 438
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMA 439
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-437 |
8.17e-144 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 418.57 E-value: 8.17e-144
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 3 KIILPMIMLLPTTLLSPPKFLWINTTMYSTLIASLSFQWLL-PTYYPHKHLTNWTGIDHISSPLLTLTCWLLPLMILASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKwSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 82 SHLQHEPLARKRTFIATLVTIQPFIVLAFSATELTLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 162 VSLLHLHTWTGTLSLPILQLvhpLLTNSWPGLLSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGY 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYF---SKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 242 GIMRITFMTTPLSNHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQTSWSFSGAMILMISHGL 321
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 322 TSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIALFHWSTPTIILTGTATL 401
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430
....*....|....*....|....*....|....*.
gi 94490691 402 LTASYTLFMLLTTQRGTLPPYLTSIQNSNTREHLLM 437
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLL 433
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-438 |
3.17e-128 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 378.93 E-value: 3.17e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 1 MLKIILPMIMLLPTTLLSPPKFLWINTTMYSTLIASLSFQWLLPTYYPHKHLTNWT-GIDHISSPLLTLTCWLLPLMILA 79
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSWHNLSLSlATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 80 SQSHLQHEPLARKRTFIATLVTIQPFIVLAFSATELTLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLP 159
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 160 LLVSLLHLHTWTGTLSLPILQLVHPLLTNSWPGLLSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLG 239
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 240 GYGIMR-ITFMTTPLSNHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQTSWSFSGAMILMIS 318
Cdd:MTH00044 241 GYGLIRlINLFSLPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 319 HGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIALFHWSTPTIILTGT 398
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 94490691 399 ATLLTASYTLFMLLTTQRGTLPPYLTSIQNSNTREHLLMA 438
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIF 440
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-437 |
7.39e-104 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 316.33 E-value: 7.39e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 1 MLKIILPMIMLLPTTLLSppKFLWINttMYSTLIASLSFQWLLPTYYPHKHLTNWTGIDHISSPLLTLTCWLLPLMILAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLK--NSWWLV--QSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 81 QSHLQHEPLARKRTFIATLVTIqpFIVLAFSATELTLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00163 77 ESVYKKNNYSNLFLFLILFLLI--FLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 161 LVSLLHLHTWTGTLSLPILQLvhplltNSWPGLLSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLLNF------FGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 241 YGIMRITFMTTPLSNHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQTSWSFSGAMILMISHG 320
Cdd:MTH00163 229 YGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 321 LTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIALFHWSTPTIILTGTAT 400
Cdd:MTH00163 309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
|
410 420 430
....*....|....*....|....*....|....*..
gi 94490691 401 LLTASYTLFMLLTTQRGTLPPYLTSIQNSNTREHLLM 437
Cdd:MTH00163 389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLL 425
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-437 |
2.06e-96 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 297.42 E-value: 2.06e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 1 MLKIILPMIMLLPTTLLSPpKFLWINTTMYSTLIASLSFQWLLPTYYPHKHLTNWTGIDHISSPLLTLTCWLLPLMILAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKY-PWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 81 QSHLQHEPLARkrTFIATLVTIQPFIVLAFSATELTLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00014 80 FKIFQNNKAPK--TFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 161 LVSLLHLHTWTGTLSLPILQLVHPLLtnsWPGLLSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00014 158 LMSILLIFYTNNSLSMLMSSMEPPSI---YLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 241 YGIMRITFMTTPLSNHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQTSWSFSGAMILMISHG 320
Cdd:MTH00014 235 YGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 321 LTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIALFHWSTPTIILTGTAT 400
Cdd:MTH00014 315 LCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITS 394
|
410 420 430
....*....|....*....|....*....|....*..
gi 94490691 401 LLTASYTLFMLLTTQRGTLPPYLTSIQNSNTREHLLM 437
Cdd:MTH00014 395 FLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLM 431
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
52-437 |
9.21e-94 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 289.43 E-value: 9.21e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 52 LTNWTGIDHISSPLLTLTCWLLPLMILASQSHLQHEPLARKRTFIATLVTIqpFIVLAFSATELTLFYIAFEATLIPTLI 131
Cdd:MTH00150 16 LSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCL--ILVLAFSVSSLLMFYFFFEASLIPTLL 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 132 LITRWGNQPERLSAGIYLLFYTLISSLPLLVSLLHLHTWTGTLSLPILQLVHPLLTNSWpglLSSLALLTAFMVKAPLYG 211
Cdd:MTH00150 94 LILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG---LWGLLVFLAFLVKLPMYP 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 212 LHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRItFMTTPLSNHLHYPFL-TLALWGALMTSSICLRQTDLKSLIAYSS 290
Cdd:MTH00150 171 FHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRM-MMVFSLSSSSFSIFLiSLSLWGGVLTSLICLRQSDVKSLIAYSS 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 291 VSHMGLVIAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALP 370
Cdd:MTH00150 250 VGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAP 329
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 94490691 371 PTTNLMAELTIMIALFHWSTPTIILTGTATLLTASYTLFMLLTTQRGTLPPYLTSIQNSNTREHLLM 437
Cdd:MTH00150 330 PSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLL 396
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
8-438 |
1.05e-88 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 277.25 E-value: 1.05e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 8 MIMLLPTTLLSPPKFLWINTTMYSTLIASLSFQWLLPTYYPHKHLTNWTGIDHISSPLLTLTCWLLPLMILASQSHLQHE 87
Cdd:MTH00205 5 GVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 88 plARKRTFIATLVTIQPFIVLAFSATELTLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVSLLHL 167
Cdd:MTH00205 85 --KNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 168 HTWTGTLSLPILqlvHPLLTNSWPGLLSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRIT 247
Cdd:MTH00205 163 NSLNFSLSMFFN---FPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRIT 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 248 FMTTPLSNHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQTSWSFSGAMILMISHGLTSSMLF 327
Cdd:MTH00205 240 SMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMF 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 328 CLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIALFHWSTPTIILTGTATLLTASYT 407
Cdd:MTH00205 320 ALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYS 399
|
410 420 430
....*....|....*....|....*....|.
gi 94490691 408 LFMLLTTQRGTLPPYLTSIQNSNTREHLLMA 438
Cdd:MTH00205 400 LYLYSQSQHGKVSSQISSFLAISEREYYILI 430
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
112-400 |
1.13e-68 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 220.26 E-value: 1.13e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 112 ATELTLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVSLLHLHTWTGTLSLPILQLVHPLLTNSWP 191
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 192 GLLSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITFMTTPLSNHLHYPFLTLALWGALM 271
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 272 TSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQTSWSFSGAMILMISHGLTSSMLFCLA-NTNYERTHSRILLLTRGLQP 350
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 94490691 351 LLPLMALWWLLANLTNMALPPTTNLMAELTIMIALFHWSTPTIILTGTAT 400
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
57-438 |
5.51e-63 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 211.48 E-value: 5.51e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 57 GIDHISSPLLTLTCWLLPLMILASQSHLQHeplaRKRTFIATLVTIQPFIVLAFSATELTLFYIAFEATLIPTLILITRW 136
Cdd:COG1008 79 GVDGISLPLVLLTALLTPLAILASWNEIKK----RPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIW 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 137 GNqPERLSAGIYLLFYTLISSLPLLVSLLHLHTWTGTLSLPILQLVHPLLTNSWpGLLSSLALLTAFMVKAPLYGLHLWL 216
Cdd:COG1008 155 GG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAELAAAPLPLTA-QLLLFLAFFIAFAVKVPMFPFHTWL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 217 PKAHVEAPIAGSMLLAALLLKLGGYGIMRITFMTTPL-SNHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMG 295
Cdd:COG1008 233 PDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMG 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 296 LVIAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALPPTTNL 375
Cdd:COG1008 313 FVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGF 392
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 94490691 376 MAELTIMIALFHWSTPTIILTGTATLLTASYTLFMLLTTQRGTLPPYLTSIQNSNTREHLLMA 438
Cdd:COG1008 393 VGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVLA 455
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
57-411 |
9.63e-55 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 189.38 E-value: 9.63e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 57 GIDHISSPLLTLTCWLLPLMILASQSHLQHeplaRKRTFIATLVTIQPFIVLAFSATELTLFYIAFEATLIPTLILITRW 136
Cdd:TIGR01972 74 GVDGISLLLVLLTALLTLLAILASWESIQK----RVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 137 GNqPERLSAGIYLLFYTLISSLPLLVSLLHLHTWTG-TLSLPILQLvHPLltNSWPGLLSSLALLTAFMVKAPLYGLHLW 215
Cdd:TIGR01972 150 GG-PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGgTFDLLELLN-LPL--PFGVQTWLFLAFFIAFAVKVPLFPLHTW 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 216 LPKAHVEAPIAGSMLLAALLLKLGGYGIMRITFMTTP-LSNHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHM 294
Cdd:TIGR01972 226 LPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHM 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 295 GLVIAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALPPTTN 374
Cdd:TIGR01972 306 GFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSG 385
|
330 340 350
....*....|....*....|....*....|....*..
gi 94490691 375 LMAELTIMIALFHWSTPTIILTGTATLLTASYTLFML 411
Cdd:TIGR01972 386 FVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
23-438 |
1.58e-54 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 189.12 E-value: 1.58e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 23 LWINTTMYSTLIASLSFQWLLPTYYPHKHLTNWTGIDHISSPLLTLTCWLLPLMILASQSHLQHeplaRKRTFIATLVTI 102
Cdd:MTH00204 46 LWGAFDGEGQFQFINLIEWIISPTLNFQWGPLVFAVDGVSLFFILLTTLLIPICILISWKSIKF----LFKEFLLCLLFL 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 103 QPFIVLAFSATELTLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVSLLHLHTWTGTLSLPILQLV 182
Cdd:MTH00204 122 EVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNI 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 183 H-PLLTNSWpgllSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITFMTTPLSNHLHYPF 261
Cdd:MTH00204 202 KlPLSIQKW----LLVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPL 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 262 LTL-----ALWGALMTSsiclRQTDLKSLIAYSSVSHMGLVIAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYER 336
Cdd:MTH00204 278 IVMlsviaVIYGSLTTC----RQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYER 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 337 THSRILLLTRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIALFHWSTPTIILTGTATLLTASYTLFMLLTTQR 416
Cdd:MTH00204 354 HHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISF 433
|
410 420
....*....|....*....|..
gi 94490691 417 GTLPPYLTSIQNSNTREHLLMA 438
Cdd:MTH00204 434 GGGSNYLLFSRDLNRRELLAIL 455
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
57-438 |
2.75e-54 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 188.49 E-value: 2.75e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 57 GIDHISSPLLTLTCWLLPLMILASQSHLQHeplaRKRTFIATLVTIQPFIVLAFSATELTLFYIAFEATLIPTLILITRW 136
Cdd:PRK05846 79 GVDGISLLLVVLTALLTPLAVLASWEEIKK----RVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVW 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 137 GnQPERLSAGIYLLFYTLI----SSLPLLVSLLHLHTWTGTLSLP-ILQLVHPLLTNSWpgllSSLALLTAFMVKAPLYG 211
Cdd:PRK05846 155 G-GKNRIYAATKFFLYTLLgsllMLVAIIYLVVVYYNATGTFDIAdLLNLPLPPGVQYW----LFLAFFIAFAVKMPMFP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 212 LHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITFMTTPLSNHLHYPFL-TLALWGALMTSSICLRQTDLKSLIAYSS 290
Cdd:PRK05846 230 LHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIiTLGVIAIIYGALVALAQTDIKKLIAYSS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 291 VSHMGLVIAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALP 370
Cdd:PRK05846 310 ISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLP 389
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 94490691 371 PTTNLMAELTIMIALFHWSTPTIILTGTATLLTASYTLFMLLTTQRGTLPPYLTSIQNSNTREHLLMA 438
Cdd:PRK05846 390 GTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLILL 457
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
57-433 |
3.89e-48 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 171.77 E-value: 3.89e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 57 GIDHISSPLLTLTCWLLPLMILASQSHLQHeplaRKRTFIATLVTIQPFIVLAFSATELTLFYIAFEATLIPTLILITRW 136
Cdd:MTH00217 77 AVDGISIFFLILTALLTPICILISWNSIKF----LIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIW 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 137 GNQPERLSAGIYLLFYTLISSLPLLVSLLHLHTWTGTLSLpilQLVHPLLTNSWPGLLSSLALLTAFMVKAPLYGLHLWL 216
Cdd:MTH00217 153 GSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDY---QALCCLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 217 PKAHVEAPIAGSMLLAALLLKLGGYGIMRITFMTTPLSNHLHYPF-LTLALWGALMTSSICLRQTDLKSLIAYSSVSHMG 295
Cdd:MTH00217 230 PQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLiQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 296 LVIAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALPPTTNL 375
Cdd:MTH00217 310 LVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNF 389
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 94490691 376 MAELTIMIALFHWSTPTIILTGTATLLTASYTLFMLLTTQRGTLPPYLTSIQNSNTRE 433
Cdd:MTH00217 390 VGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLYNRVCFGAPSKYLYFSRDLNRRE 447
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
58-438 |
7.22e-47 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 168.95 E-value: 7.22e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 58 IDHISSPLLTLTCWLLPLMILASQSHLQHeplaRKRTFIATLVTIQPFIVLAFSATELTLFYIAFEATLIPTLILITRWG 137
Cdd:MTH00226 100 VDGISIYFIILTGFIVPCSILISWHSVKY----LTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWG 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 138 NQPERLSAGIYLLFYTLISSLPLLVSLLHLHTWTGT---LSLPILQLVHPLLTNSWpgllSSLALLTAFMVKAPLYGLHL 214
Cdd:MTH00226 176 SREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTtdyLTLASCSHVVSEQTQKW----IFLGIFLAMAVKIPIFPFHI 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 215 WLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITFMTTPL-SNHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSH 293
Cdd:MTH00226 252 WLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAH 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 294 MGLVIAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALPPTT 373
Cdd:MTH00226 332 MGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSG 411
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 94490691 374 NLMAELTIMIALFHWSTPTIILTGTATLLTASYTLFMLLTTQRGTLPPYLTSIQNSNTREHLLMA 438
Cdd:MTH00226 412 NFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFARDVNRREFYITA 476
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
105-412 |
3.85e-40 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 148.52 E-value: 3.85e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 105 FIVLAFSATELTLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVSLLhlhtwtgtLSLPILQLVHP 184
Cdd:MTH00094 74 ICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYL--------KNFFFFSLCYF 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 185 LLTNSWpglLSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITFMTTPLSNHLhypFLTL 264
Cdd:MTH00094 146 DFFLSW---EMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFVYNNF---WIIF 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 265 ALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLL 344
Cdd:MTH00094 220 SLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYF 299
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 94490691 345 TRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIALFHWSTPTIILTGTATLLTASYTLFMLL 412
Cdd:MTH00094 300 MNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIV 367
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
54-433 |
3.83e-35 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 136.70 E-value: 3.83e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 54 NWT-GIDHISSPLLTLTCWLLPLMILASQShLQHEPlarkRTFIATLVTIQPFIVLAFSATELTLFYIAFEATLIPTLIL 132
Cdd:PRK12561 52 EWSlGVDGLSMPLVLLSGLITTLSIFASWK-VTRKP----RLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLL 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 133 ITRWGNQpERLSAGIYLLFYTLISSLPLLVSLLHLHTWTGTLSLPILQLVHplltNSWPGLLSSLA---LLTAFMVKAPL 209
Cdd:PRK12561 127 ISIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGA----KSYPLALELLLyagFLIAFGVKLPI 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 210 YGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITFMTTPlSNHLHYPFLTLAL------WGALMTssicLRQTDLK 283
Cdd:PRK12561 202 FPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLP-DAHVYFAPALAILgvvniiYGALNA----FAQDNVK 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 284 SLIAYSSVSHMGLVIAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLAN 363
Cdd:PRK12561 277 RRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASS 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 364 LTNMALPPTTNLMAELTIMIALFH-------WSTPTIILTGTATLLTASYTLFML---LTTQRGTLPPYLTSIQNSNTRE 433
Cdd:PRK12561 357 MASLALPGMSGFVSELTVFLGITSsdvysstFRTITILLAAVGLILTPIYLLSMLrrvFYGPRSELLPALAVVEDAKPRE 436
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
58-402 |
7.00e-31 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 123.33 E-value: 7.00e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 58 IDHISSPLLTLTCWLLPLMILASQSHLQHEplARKRTFIATLVTIQPFIVLAFSATELTLFYIAFEATLIPTLILITrWG 137
Cdd:COG0651 74 ADRLSALFLLLTALVALAVLLYSIGYMRHE--RRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVA-LG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 138 NQPERLSAGIYLLFYTLISSLPLLVSLLHLHTWTGTLSLPILQLVHPLLTNSWpGLLSSLALLTAFMVKAPLYGLHLWLP 217
Cdd:COG0651 151 GTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGL-LLAAFALLLVGFGIKAALFPLHFWLP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 218 KAHVEAPIAGSMLLAALLLKLGGYGIMRITFM--TTPLSNHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMG 295
Cdd:COG0651 230 DAYPAAPSPVSALLSGLLTKVGVYAILRVLTLlfGADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 296 LVIAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALPPTTNL 375
Cdd:COG0651 310 YILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGF 389
|
330 340 350
....*....|....*....|....*....|.
gi 94490691 376 MAELTIMIALFH----WSTPTIILTGTATLL 402
Cdd:COG0651 390 VSKWLLLQAALEagawLLAAVLLLSSLLTLA 420
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
57-426 |
4.91e-30 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 122.12 E-value: 4.91e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 57 GIDHISSPLLTLTCWLLPLMILASQSHLQheplaRKRTFIATLVTIQPFIVLAFSATELTLFYIAFEATLIPTLILITRW 136
Cdd:PRK06473 76 GVDGLSLPLLVLNSLLTLIAIYSSDESIQ-----RPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 137 GNQpERLSAGIYLLFYTLISSLPLLVSLLHLHTWTGTLSLPIlqlvHPLLTNSWP---GLLSSLALLTAFMVKAPLYGLH 213
Cdd:PRK06473 151 GGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDY----EPLRSHTLPlstQLLLLAPILVGFGIKIPLVPFH 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 214 LWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITFMTTPLSNHLHYPFL-TLALWGALMTSSICLRQTDLKSLIAYSSVS 292
Cdd:PRK06473 226 TWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLaTWAVVSVLYGASCAIAQKDMKKMVAYSSIG 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 293 HMGLVIAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGL---QPLLPLMALWWLLANLTNMAL 369
Cdd:PRK06473 306 HMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGI 385
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 94490691 370 PPTTNLMAELTIMIALFHWSTPTIILTGTATLLTASYTLFMLLTTQRGTLPPYLTSI 426
Cdd:PRK06473 386 PGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNL 442
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
38-428 |
9.36e-27 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 112.88 E-value: 9.36e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 38 SFQWLlptyyPHKHLTNWTGIDHISSPLLTLTCWLLPLMILASQshlqhePLARK-RTFIATLVTIQPFIVLAFSATELT 116
Cdd:PRK02546 70 SYSWL-----PQLGLTWSVGADGLSMPLILLTGFITTLAVLAAW------PVTFKpKLFYFLMLAMYGGQIAVFAVQDML 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 117 LFYIAFEATLIPTLILITRWGNQpERLSAGIYLLFYTLISSLPLLVSLLHLHTWTGTLSLPILQLVHPLLTNSWPgLLSS 196
Cdd:PRK02546 139 LFFLAWELELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGFQ-LLCY 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 197 LALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITFMTTPLSNHLHYPFL-TLALWGALMTSSI 275
Cdd:PRK02546 217 AGLLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLiVLGVVNIIYAALT 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 276 CLRQTDLKSLIAYSSVSHMGLVIAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLM 355
Cdd:PRK02546 297 SFAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKM 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 356 ALWWLLANLTNMALPPTTNLMAELTIMIAL-------FHWSTPTIILTGTATLLTASYTLFMLLTTQRGTLPPYLTSIQN 428
Cdd:PRK02546 377 FAMWTACSLASLALPGMSGFVAELMVFVGFatsdaytLPFRVVVVFLAAVGVILTPIYLLSMLREIFFGPENKELVSHEK 456
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-109 |
1.45e-25 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 100.29 E-value: 1.45e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 1 MLKIILPMIMLLPTTLLSPPKFLWINTTMYSTLIASLSFQWLL-PTYYPHKHLTNWTGIDHISSPLLTLTCWLLPLMILA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNnPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 94490691 80 SQSHLQHEPLARKRTFIATLVTIQPFIVLA 109
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
57-419 |
5.31e-24 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 104.41 E-value: 5.31e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 57 GIDHISSPLLTLTCWLLPLMILASQshlqhEPLARKRTFIATLVTIQPFIVLAFSATELTLFYIAFEATLIPTLILITRW 136
Cdd:PRK07363 76 GVDGLSLPLLVLNSLLTWIAIYSIG-----ENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 137 GNQpERLSAGIYLLFYTLISSLPLLVSLLHLHTWTGTLSLPILQLVHPLLTNSwPGLLSSLALLTAFMVKAPLYGLHLWL 216
Cdd:PRK07363 151 GGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLN-TQLILLTGLLLGFGIKIPLVPLHTWL 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 217 PKAHVEAPIAGSMLLAALLLKLGGYGIMRITFMTTPLSNHLHYPflTLALWGA---LMTSSICLRQTDLKSLIAYSSVSH 293
Cdd:PRK07363 229 PDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGTisvIYGALSAIAQKDIKRMVAYSSIGH 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 294 MGLVIAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGL-QPL--LPLMALWWLLANLTNMALP 370
Cdd:PRK07363 307 MGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLmNPIrgLPLTSALLVLAGMASAGIP 386
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 94490691 371 PTTNLMAELTIMIALFHWSTPTIILTGTATLLTASYTLFMLLTTQRGTL 419
Cdd:PRK07363 387 GLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRL 435
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
57-411 |
2.65e-21 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 96.17 E-value: 2.65e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 57 GIDHISSPLLTLTCWLLPLMILASQshlqhePLARK-RTFIatlvtiqpFIVLA--------FSATELTLFYIAFEATLI 127
Cdd:CHL00011 81 GIDGLSIGPILLTGFITTLATLAAW------PVTRNsRLFY--------FLMLAmysgqiglFSSRDLLLFFIMWELELI 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 128 PTLILITRWGNQpERLSAGIYLLFYTLISSLPLLVsllhlhtwtGTLSLPILQLVHPLL------TNSWPGLLSSLALL- 200
Cdd:CHL00011 147 PVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLI---------GVLGMGLYGSNEPTLnfetlaNQSYPVALEILFYIg 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 201 --TAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITFMTTPlsnHLHYPFLT-LALWGALM---TSS 274
Cdd:CHL00011 217 flIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLP---HAHSIFSPwLVIVGAIQiiyAAS 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 275 ICLRQTDLKSLIAYSSVSHMGLVIAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPL 354
Cdd:CHL00011 294 TSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPK 373
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 94490691 355 MALWWLLANLTNMALPPTTNLMAELT----IMIALFHWSTPTIILT---GTATLLTASYTLFML 411
Cdd:CHL00011 374 IFTMFSSFSMASLALPGMSGFVAELIvffgIITSQKYLLMPKILITfvmAIGMILTPIYLLSML 437
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
203-412 |
3.05e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 83.87 E-value: 3.05e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 203 FMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITFM-------TTPLSNHLHYPFLTLALWGALMTSSI 275
Cdd:PRK12667 233 FTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTifgispsLIDFRAALSPILIILGAVSAIIGALM 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 276 CLRQTDLKSLIAYSSVSHMGLVIAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLM 355
Cdd:PRK12667 313 MVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIA 392
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 356 ALWWLLANLTNMALPPTTNLMAELTIMIALFHWSTPT---IILTGTATLLTASYTLFMLL 412
Cdd:PRK12667 393 SFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLpalVLLIASAISLVGYFRAWYSL 452
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
203-406 |
6.72e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 79.54 E-value: 6.72e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 203 FMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITF----MTTPLSNHLHYPFLTLALWGALMTSSICLR 278
Cdd:PRK08375 212 LALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFtvfgGDFRFALGLGWLLAVLALLSMLVGSLAALG 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 279 QTDLKSLIAYSSVSHMGLVIAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALW 358
Cdd:PRK08375 292 QDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAA 371
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 94490691 359 WLLANLTNMALPPTTNLMAELTIMIALFH-WSTPTIILTGTATLLTASY 406
Cdd:PRK08375 372 FAVASLSLIGVPPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLY 420
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
206-413 |
3.12e-12 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 68.42 E-value: 3.12e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 206 KAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRItFMTTPLSNHLHYP---FLTLALWGALMTSSICLRQTDL 282
Cdd:PRK06458 227 KVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRY-YILIDAAIGSDFPgrlLLIFGLLSVLVAAFFLLRQRDI 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 283 KSLIAYSSVSHMGLVIAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLA 362
Cdd:PRK06458 306 KRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLG 385
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 94490691 363 NLTNMALPPTTNLMAELTIMIALFH----WSTPTIILtgtaTLLTASYTLFMLLT 413
Cdd:PRK06458 386 ALAIAGMPPFGVFISEFLILTAGLArgplLIAILLLL----LLTLAFAALVRRVA 436
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
90-406 |
5.08e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 67.67 E-value: 5.08e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 90 ARKRTFIATLVTIQPFIVLAFSATELTLFYIAFEATLIPTLILITrWGNQPERLSAGIYLLFYTLISSLPLLVSLLHLHT 169
Cdd:PRK07234 91 AKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQ 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 170 WTGTLSLPILQLVHPLltnswpgllSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRitfm 249
Cdd:PRK07234 170 ANGTFAFSGLATADPE---------AFALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVR---- 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 250 TTPLSNHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIqtswsfsgAMILMISHGLTSSMLFCL 329
Cdd:PRK07234 237 CALDVPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKSTLFLC 308
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 94490691 330 ANTNYERTHSRILLLTRGLQPLLPLmalwwLLANLTNMALPPTTNLMAELTIMIALFHWSTPTIILtgtATLLTASY 406
Cdd:PRK07234 309 AGALPSRNFTELISQMLGIGKWIPL-----TMASFSIAGFPLLAGFVSKVLTLKNLLPWQAIALNL---AAVGTAAS 377
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
57-386 |
5.45e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 67.83 E-value: 5.45e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 57 GIDHISSPLLTLTCWLLPLMILASQSHLQHEPLARKRTFIATLVTIQPFIVLAFSATELTLFYIAF-EATLIPTLILITR 135
Cdd:PRK08667 74 HIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTALFILSMLGVVASANTFSFLFFwEIMALSSFFLVMN 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 136 WGNQPERLSAGIYLLFYTLISSLPLLVSLLHLHTWTGTLSLPILQLVHPLLTNSWpgllssLALLTAFMVKAPLYGLHLW 215
Cdd:PRK08667 154 DYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLVF------LLLFLGFGIKAGIIPFHKW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 216 LPKAHVEAPIAGSMLLAALLLKLGGYGIMRitFMTTPLSNHLHYPFLTLAL--WGALMTSSICLRQTDLKSLIAYSSVSH 293
Cdd:PRK08667 228 LPYAHPASPSNVSALMSGVMLKVAVYGLVR--FLMDVLSPELWWGVLILLAgsISALLGVIYALKEHDLKGLLAYSSIEN 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 294 MGLV---IAASMIQTSW--------SFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLA 362
Cdd:PRK08667 306 IGIIlmgIGLYVIFGVYgldtlallALGGALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVG 385
|
330 340
....*....|....*....|....
gi 94490691 363 NLTNMALPPTTNLMAELTIMIALF 386
Cdd:PRK08667 386 AVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
213-401 |
4.01e-10 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 61.86 E-value: 4.01e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 213 HLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRITfmttPLSNHLHYPFLTLALWGA---LMTSSICLRQTDLKSLIAY 288
Cdd:PRK12647 215 HFWLPNA-MEAPTPVSAYLHSATMVKAGiYLLARLN----PVLGGTPLWQTILPLFGGltmLTGALLAVRQTDLKLILAY 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 289 SSVSHMGLVIAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMA 368
Cdd:PRK12647 290 STVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAG 369
|
170 180 190
....*....|....*....|....*....|...
gi 94490691 369 LPPTTNLMAELTIMIALFHWSTPTIILTGTATL 401
Cdd:PRK12647 370 LPPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
203-406 |
1.66e-09 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 59.78 E-value: 1.66e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 203 FMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITFMTTPLS--NHLHYPFLTLALWGALMTSSICLRQT 280
Cdd:PRK08377 216 LAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANgwSSVLKLVIIMATLTVFFAELSALRQK 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 281 DLKSLIAYSSVSHMGLVIAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWL 360
Cdd:PRK08377 296 NVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALT 375
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 94490691 361 LANLTNMALPPTTNLMAELTIMIALFHWS-TPTIILTGTATLLTASY 406
Cdd:PRK08377 376 IGALSTVGIPLFNVFWSKFRIILAGLSAGyTWPVALVLGASVVEAVY 422
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
205-384 |
3.41e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 58.59 E-value: 3.41e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 205 VKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRI---------TFMTTPLSNhlhyPFLTLALWGALMTSSI 275
Cdd:PRK12662 221 IKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIvydvfkanfVFTTLPFNN----VFMILAALAIVFGSVL 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 276 CLRQTDLKSLIAYSSVSHMGLVIAASMIQTSWSFSGAMILMISHGLTSSMLFCLANT---NYERTHSRILLltrGLQPLL 352
Cdd:PRK12662 297 AILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSisyHFGTTKLEDCL---NLWKSM 373
|
170 180 190
....*....|....*....|....*....|..
gi 94490691 353 PLMALWWLLANLTNMALPPTTNLMAELTIMIA 384
Cdd:PRK12662 374 PKITLAFVLLSLSLIGMPPTSGFVAKWYILDA 405
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
205-327 |
6.25e-09 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 58.08 E-value: 6.25e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 205 VKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIM--------------RITFMTTPLSNhlhYPFLTLALWGAL 270
Cdd:PRK08668 208 AKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLlvlyvlpgtklfseFGTYRGVPLFN---YILAWLGNISII 284
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 94490691 271 MTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQTSWSFSGAMILMISHGLTSSMLF 327
Cdd:PRK08668 285 VGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
203-385 |
1.15e-08 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 57.07 E-value: 1.15e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 203 FMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITFM--TTPLSNHLHYPFLTLALWGALMTSSICLRQT 280
Cdd:PRK08676 216 FLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALlrQSGAAEQFSNVLIGLGIFSIAVAAFSMLSQR 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 281 DLKSLIAYSSVSHMGLVIAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWL 360
Cdd:PRK08676 296 NLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAAWGVI 375
|
170 180
....*....|....*....|....*
gi 94490691 361 LANLTNMALPPTTNLMAELTIMIAL 385
Cdd:PRK08676 376 LGSAAIIGMPPFPLFLSKFFILLQL 400
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
204-402 |
7.56e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 54.44 E-value: 7.56e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 204 MVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITFMTTPLSN-----HLHYPFLTLALWGALMTSSICLR 278
Cdd:PRK06589 221 IAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYlqrifAEFNWLIFIPIVSIFYSSLKALK 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 279 QTDLKSLIAYSSVSHMGLVIAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALW 358
Cdd:PRK06589 301 TDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFI 380
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 94490691 359 WLLANLTNMALPPTTNLMAELTIMIALFHWSTP------TIILTGTATLL 402
Cdd:PRK06589 381 ISISSLSLIGIPIFSGFISKFLILLAASEQNQPwlsiivMLVVIASSILS 430
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
203-386 |
1.06e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 54.12 E-value: 1.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 203 FMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITFmttplsNHLH-------YPFLTLALWGALMTSSI 275
Cdd:PRK06521 220 FGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVF------DLLGapgwwwgVLVLALGAISAVLGVLY 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 276 CLRQTDLKSLIAYSSVSHMGLVIAA---SMI--------QTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLL 344
Cdd:PRK06521 294 ALAEHDLKRLLAYSTIENIGIIFVGlglAMVfiaygmplLAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEK 373
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 94490691 345 TRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIALF 386
Cdd:PRK06521 374 LGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLL 415
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
262-414 |
4.33e-07 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 52.08 E-value: 4.33e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 262 LTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQtswSFSGAMILMISHGLTSSMLFCLANTNYERTHSRI 341
Cdd:COG1009 279 AIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRD 355
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 94490691 342 LLLTRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIALFHWSTPTIILTGTATL---LTASYTLFMLLTT 414
Cdd:COG1009 356 IRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTAFYSFRLFFLV 431
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
117-414 |
9.75e-07 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 51.29 E-value: 9.75e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 117 LFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVSLLHLHTWTGTLSLP-ILQLVHPLLTNSWPGLLS 195
Cdd:PRK12646 134 LMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITeILGQADHIKNHGLFIPMI 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 196 SLALLTAFmVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGGygiMRITFMTTP---LSNHLHYPFLTLALWGALMT 272
Cdd:PRK12646 214 FMFLLGAF-TKSAQFPFHIWLPRA-MAAPTPVSAYLHSATMVKAG---IFLLFRFTPllgLSNMYIYIVTFVGLITMLFG 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 273 SSICLRQTDLKSLIAYSSVSHMGLVIaaSMI--------QTSWSFS--------GAMILMISHGLTSSMLFCLANTNYER 336
Cdd:PRK12646 289 SITALKQWDLKGILAYSTISQLGMIM--AMVgigggyaqHQQDAIAsiyvfvlfAALFHLMNHAIFKCALFMGVGIIDHE 366
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 337 THSRILLLTRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIALFHWS-------TPTIILTGT---ATLLTASY 406
Cdd:PRK12646 367 AGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGqlsqfslISMIIIVFIgviASIFTFTY 446
|
....*...
gi 94490691 407 TLFMLLTT 414
Cdd:PRK12646 447 ALYMVKEV 454
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
206-372 |
2.79e-06 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 50.04 E-value: 2.79e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 206 KAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRIT--FMTTPLSNHLhypFLTLALWGALMTSSICLRQTDLK 283
Cdd:PRK12650 221 KSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSpvFHDVAVWNWL---LIIVGMITALMGAVFAVQKTDLK 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 284 SLIAYSSVSHMGLVIAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLAN 363
Cdd:PRK12650 298 KLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRRMPFTFVSVTIAA 377
|
....*....
gi 94490691 364 LTNMALPPT 372
Cdd:PRK12650 378 LSMAAVPPL 386
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-384 |
8.40e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 48.04 E-value: 8.40e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 108 LAFSATELTLFYIAFEATLIPTLILITRwGNQPERLSAGIYLLFYTLISSLPLLVSLLHLHTWTGTLSLPILQLvhpLLT 187
Cdd:PRK12665 126 NAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAV---RLD 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 188 NSWPGLLSSLALLTA--FMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITFMTTPlsnhlHYPFLTLA 265
Cdd:PRK12665 202 ELPSGTRTALFAVLLvaFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-----GGGLDTLL 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 266 LWGALMTSSI----CLRQTDLKSLIAYSSVSHMGLVIAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRI 341
Cdd:PRK12665 277 MVVALLTMVVgilgAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSS 356
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 94490691 342 LLLTRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIA 384
Cdd:PRK12665 357 LRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLEA 399
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
212-407 |
1.74e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 47.01 E-value: 1.74e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 212 LHLWLPKAHVEAPiAGSMLLAALLLKLGGYGIMRITF-MTTPLSNHLHYPFLTLALWGALMT--SSICLRQTDLKSLIAY 288
Cdd:PRK08376 239 VHMWLPDAYPAAP-SSISAMLLVIKQAGLYALARVLFsIYGPAINLATVGWVIIILGCLTMFvgVAMAVVQKDVKRLLAY 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 289 SSVSHMG---------LVIAASMIQTSWSF---SGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMA 356
Cdd:PRK08376 318 HSVSQIGymllglgvgLAALGDPAMASYGEialAGGIYHIVNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTT 397
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 94490691 357 LWWLLANLTNMALPPTTNLMAELTIM--IALFHWSTPTIILTGTAtLLTASYT 407
Cdd:PRK08376 398 IAFLIGAAAIVGLPPFNGFASKWLIYesSALFNPILGVIAMIGSV-LTLASFV 449
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
257-371 |
3.18e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 46.18 E-value: 3.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 257 LHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYER 336
Cdd:PRK06277 265 AQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYR 344
|
90 100 110
....*....|....*....|....*....|....*
gi 94490691 337 THSRILLLTRGLQPLLPLMALWWLLANLTNMALPP 371
Cdd:PRK06277 345 TKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPP 379
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
277-323 |
7.45e-05 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 44.81 E-value: 7.45e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 94490691 277 LRQTDLKSLIAYSSVSHMGLVIAASMIQTSWSFSGAMILMISHGLTS 323
Cdd:PRK05777 289 LSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMT 335
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
277-323 |
1.24e-04 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 44.34 E-value: 1.24e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 94490691 277 LRQTDLKSLIAYSSVSHMGLVIAASMIQTSWSFSGAMILMISHGLTS 323
Cdd:COG1007 288 LAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMN 334
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
206-380 |
1.76e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 44.18 E-value: 1.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 206 KAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGGYGIMRITFmttPLSNHLHYPFLTLALWGAL---MTSSICLRQTDL 282
Cdd:MTH00032 238 KSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFLMIRSF---PLFEKAPLTLLIITIFGALtafFAATVGLVQNDL 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 283 KSLIAYSSVSHMGLVIAASMIQTSWSFSgaMILMISHGLTSSMLFCLA-----NTNYERTHSRILlltRGLQPLLPLMAL 357
Cdd:MTH00032 314 KKVIAYSTCSQLGYMVLIIGIEGSHNVG--LFHLVNHAFFKALLFLSAgsvihSTTVDEQDMRKM---GGLIHSIPFTYT 388
|
170 180
....*....|....*....|....*...
gi 94490691 358 WWLLANLTNMALPPTT-----NLMAELT 380
Cdd:MTH00032 389 MMLIGSFSIMGLPYLTgfyskDLILELT 416
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
203-401 |
2.96e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 43.01 E-value: 2.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 203 FMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRI-TFMTTPLSNHLHYPFLTLALWGALMTSSICLRQTD 281
Cdd:PRK07691 219 FATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTfTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFD 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 282 LKSLIAYSSVSHMGLVIAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLL 361
Cdd:PRK07691 299 IKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFI 378
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 94490691 362 ANLTNMALPPTTNLMAELTIMIALF----HWSTPTIILTGTATL 401
Cdd:PRK07691 379 AALSLAGIPPLSGFYGKFFIVEGTFeagfYVSGIIVLLSSLLVL 422
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
212-386 |
3.68e-04 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 42.89 E-value: 3.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 212 LHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITFMTTPLSNHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSV 291
Cdd:PRK08042 199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTL 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 292 SHMGLV---IAASMIQTSWS--------FSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWL 360
Cdd:PRK08042 279 ENIGIIllgLGAGVTGIALEqpalialgLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAML 358
|
170 180
....*....|....*....|....*.
gi 94490691 361 LANLTNMALPPTTNLMAELTIMIALF 386
Cdd:PRK08042 359 VGLMAMAALPPLNGFAGEWVIYQSFF 384
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
279-402 |
3.88e-04 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 42.65 E-value: 3.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 279 QTDLKSLIAYSSVSHMG---LVIAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLM 355
Cdd:PRK06525 293 QQDMKRLLAYSTITQLGymfFGLSLAILGSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLV 372
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 94490691 356 ALWWLLANLTNMALPPTTNLMAELTIMIALFHWSTPTIILTGTATLL 402
Cdd:PRK06525 373 GVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVLL 419
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
206-410 |
7.45e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 42.22 E-value: 7.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 206 KAPLYGLHLWLPKAhVEAPI-------AGSMLLAalllklGGYGIMRIT--FMTTPLsnhLHYPFLTLALWGALMTSSIC 276
Cdd:PRK12644 216 KSAIVPFHFWLPGA-MAAPTpvsaylhAAAMVKA------GIYLVARLApgFADVPV---WRPTVLVLGLATMLLGGWRA 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 277 LRQTDLKSLIAYSSVSHMGLVIAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMA 356
Cdd:PRK12644 286 LRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSGLGRRQPVLA 365
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 94490691 357 LWWLLANLTNMALPPTTNLMAELTIMIALFHWSTP----TIILTGTA--TLLTASYTL-FM 410
Cdd:PRK12644 366 VVAALAAASMAGLPPLLGFVAKEAALEAVLHDGALgpagPVVLAGIVlgSILTVAYSLrFL 426
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
203-386 |
2.79e-03 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 39.93 E-value: 2.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 203 FMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRItFMTTP--LSNHLHYPFLTLALWGALMTSSICLRQT 280
Cdd:TIGR01770 213 LLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRL-FLYILfgFSEAWQIFLAIIAFLSMLIGNFGALAQK 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 281 DLKSLIAYSSVSHMGLVIAASMIQTSWSFSGAMILMISHGLTS----SMLFCLANTNYERTHSriLLLTRGLQPLLPLMA 356
Cdd:TIGR01770 292 KVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSlgafGVLSLLRSYKDEWIEY--ISDFAGLFKTNPILA 369
|
170 180 190
....*....|....*....|....*....|
gi 94490691 357 LWWLLANLTNMALPPTTNLMAELTIMIALF 386
Cdd:TIGR01770 370 ILILIFMFSLAGIPPLAGFFGKFYVFFALL 399
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
204-432 |
6.74e-03 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 38.90 E-value: 6.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 204 MVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRitfmTTPLSNHLHYPFLTLALWGAL---MTSSICLRQ 279
Cdd:MTH00020 221 VGKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGvFLLIR----SSPLFEQAPLALIIVTIVGSLtvfFAATVGLVQ 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 280 TDLKSLIAYSSVSHMGLVIAASMIQtswSFSGAMILMISHGLTSSMLFCLANT-----NYERTHSRIllltRGLQPLLPL 354
Cdd:MTH00020 296 NDLKKVIAYSTCSQLGYMVVACGLS---HYSISLFHLMNHAFFKALLFLSAGSvihalSDEQDMRKM----GGLISFLPL 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94490691 355 MALWWLLANLTNMALPPTTNLMA-ELTIMIALF-HWSTPTIILTGTATLLTASYTLFMLlttqrgtlppYLTSIQNSNTR 432
Cdd:MTH00020 369 TYIFFLIGSLSLMGFPYLTGFYSkDLILELAFGqYYLIFAYWLGCFSALLTAFYSIRLI----------YLTFLSNTNLK 438
|
|
| |
