|
Name |
Accession |
Description |
Interval |
E-value |
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
1-488 |
0e+00 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 818.42 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 1 MNQFPWLSIIILFPLFAAFFIPLLPSRENQTVRWYTLGICLLDFLVMSYIFGYYYDFHNSSFQFKESIEWIPTIGFKWAL 80
Cdd:CHL00011 1 MNYFPWLTIIVVLPIFAGSLIFFLPHRGNKVIRWYTLCICLLELLLTTYAFCYHFQLDDPLIQLKEDYKWINFFDFHWRL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 81 GVDGLSMGLILLTGLVTTLAVLAAWPITCNPKLFYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIPIYLLISLWGGRRR 160
Cdd:CHL00011 81 GIDGLSIGPILLTGFITTLATLAAWPVTRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKR 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 161 LYAATKFIFYTAIGSLFLFIATFTVCFYGANIATWHFEDLAEKEYPFILEKILYLGFGFAYAVKLPIIPFHTWLPDTHGE 240
Cdd:CHL00011 161 LYSATKFILYTAGGSIFLLIGVLGMGLYGSNEPTLNFETLANQSYPVALEILFYIGFLIAYAVKLPIIPLHTWLPDTHGE 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 241 AHYSTCMLLAGILLKMGGYGWIRINMTLFPNAHAYFAPWLVILGTVQIIYAASVCLSQKNLKRRIAYSSISHMGFVLIGI 320
Cdd:CHL00011 241 AHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 321 CSFTNIGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIALKMPKMFSMFTGFSLASLALPTMSGFVAEMMI 400
Cdd:CHL00011 321 GSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIV 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 401 FLGIISSTFYSPSFRCFIILFQALGVILTPIYLLSMLRQMFYGVDTFHFESMSFIDSGPREVFIIVSLFIPVIIIGLYPN 480
Cdd:CHL00011 401 FFGIITSQKYLLMPKILITFVMAIGMILTPIYLLSMLRQMFYGYKLFNVPNSYFFDSGPRELFISICILLPVIGIGIYPD 480
|
....*...
gi 108773212 481 ILLSIWQN 488
Cdd:CHL00011 481 FVLSLSVD 488
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
1-493 |
0e+00 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 644.45 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 1 MNQFPWLSIIILFPLFAAFFIPLLPSR-ENQTVRWYTLGICLLDFLVMSYIFGYYYDFHNSSFQFKESIEWIPTIGFKWA 79
Cdd:PRK02546 3 LANFPWLTTIILFPIVAALLIPFIPDKgDGKTVRWYALIVGLIDFLITVYAFYTGYDFSNPGLQLVESYSWLPQLGLTWS 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 80 LGVDGLSMGLILLTGLVTTLAVLAAWPITCNPKLFYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIPIYLLISLWGGRR 159
Cdd:PRK02546 83 VGADGLSMPLILLTGFITTLAVLAAWPVTFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGGKK 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 160 RLYAATKFIFYTAIGSLFLFIATFTVCFYGANIaTWHFEDLAEKEYPFILEKILYLGFGFAYAVKLPIIPFHTWLPDTHG 239
Cdd:PRK02546 163 RQYAATKFILYTAGSSLFILLAALAMAFYGDTP-TFDMTALAAKDFGLGFQLLCYAGLLIAYGVKLPIVPLHTWLPDAHG 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 240 EAHYSTCMLLAGILLKMGGYGWIRINMTLFPNAHAYFAPWLVILGTVQIIYAASVCLSQKNLKRRIAYSSISHMGFVLIG 319
Cdd:PRK02546 242 EATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIG 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 320 ICSFTNIGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIALKMPKMFSMFTGFSLASLALPTMSGFVAEMM 399
Cdd:PRK02546 322 IGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELM 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 400 IFLGIISSTFYSPSFRCFIILFQALGVILTPIYLLSMLRQMFYGVDTFHFESMS-FIDSGPREVFIIVSLFIPVIIIGLY 478
Cdd:PRK02546 402 VFVGFATSDAYTLPFRVVVVFLAAVGVILTPIYLLSMLREIFFGPENKELVSHEkLVDAEPREVFIIACLLVPIIGIGLY 481
|
490
....*....|....*
gi 108773212 479 PNILLSIWQNALSIL 493
Cdd:PRK02546 482 PKLVTQSYDATTNQL 496
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
26-481 |
0e+00 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 630.91 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 26 SRENQTVRWYTLGICLLDFLVMSYIFGYYYDFHNSSFQFKESIEWIPTIGFKWALGVDGLSMGLILLTGLVTTLAVLAAW 105
Cdd:PRK12561 1 DKEGKTVRWYALGVGLADFALMCYVFWQHYDPSSSSLQLVERYAWLPQIGLEWSLGVDGLSMPLVLLSGLITTLSIFASW 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 106 PITCNPKLFYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIPIYLLISLWGGRRRLYAATKFIFYTAIGSLFLFIATFTV 185
Cdd:PRK12561 81 KVTRKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGGQKRLYAATKFILYTALASIFILVAGLAL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 186 CFYGANIaTWHFEDLAEKEYPFILEKILYLGFGFAYAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGGYGWIRIN 265
Cdd:PRK12561 161 ALSGDTF-TFDLAELGAKSYPLALELLLYAGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFN 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 266 MTLFPNAHAYFAPWLVILGTVQIIYAASVCLSQKNLKRRIAYSSISHMGFVLIGICSFTNIGLSGAICQMISHGLIGASL 345
Cdd:PRK12561 240 VQMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAAL 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 346 FFLAGTTYDRIRTVSLSEMGGIALKMPKMFSMFTGFSLASLALPTMSGFVAEMMIFLGIISSTFYSPSFRCFIILFQALG 425
Cdd:PRK12561 320 FFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVFLGITSSDVYSSTFRTITILLAAVG 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 108773212 426 VILTPIYLLSMLRQMFYGVDTFHFESMSFI-DSGPREVFIIVSLFIPVIIIGLYPNI 481
Cdd:PRK12561 400 LILTPIYLLSMLRRVFYGPRSELLPALAVVeDAKPRELFIALSLLVPIIGIGFYPKL 456
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
3-485 |
0e+00 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 515.40 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 3 QFPWLSIIILFPLFAAFFIPLLPSRENQTVRWYTLGICLLDFLVMSYIFgYYYDFHNSSFQFKESIEWIPTIGFKWALGV 82
Cdd:COG1008 2 GMPLLSLLILLPLLGALLLLLLPRRNARLARWVALAVSLLTLLLSLYLL-AGFDPGTGGFQFVESYPWIPSLGISYHLGV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 83 DGLSMGLILLTGLVTTLAVLAAWP-ITCNPKLFYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIPIYLLISLWGGRRRL 161
Cdd:COG1008 81 DGISLPLVLLTALLTPLAILASWNeIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGGERRI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 162 YAATKFIFYTAIGSLFLFIATFTVCFYGAnIATWHFEDLAEKEYPFILEKILYLGFGFAYAVKLPIIPFHTWLPDTHGEA 241
Cdd:COG1008 161 YAAIKFFLYTLAGSLLMLVAILALYFLAG-ALTFDIAELAAAPLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPDAHVEA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 242 HYSTCMLLAGILLKMGGYGWIRINMTLFPNAHAYFAPWLVILGTVQIIYAASVCLSQKNLKRRIAYSSISHMGFVLIGIC 321
Cdd:COG1008 240 PTAGSVLLAGVLLKMGGYGLLRFALPLFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIF 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 322 SFTNIGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIALKMPKMFSMFTGFSLASLALPTMSGFVAEMMIF 401
Cdd:COG1008 320 ALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVL 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 402 LGIISSTFyspsfrcFIILFQALGVILTPIYLLSMLRQMFYGVDTFHFESMSfiDSGPREVFIIVSLFIPVIIIGLYPNI 481
Cdd:COG1008 400 LGAFQVNP-------WLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELP--DLNPRELAVLAPLAALILLLGLYPQP 470
|
....
gi 108773212 482 LLSI 485
Cdd:COG1008 471 LLDL 474
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
7-489 |
2.75e-154 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 447.85 E-value: 2.75e-154
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 7 LSIIILFPLFAAFFIPLLPSRENQTVRWYTLGICLLDFLVMSYIFGYYyDFHNSSFQFKESIEWIPTIGFKWALGVDGLS 86
Cdd:TIGR01972 1 LSLLIFLPLIGALLILLLPSNKDGKARWIALVVALATLLLSLLLLFQF-DPTGSGFQFTEDIPWIPALGISYHLGVDGIS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 87 MGLILLTGLVTTLAVLAAWP-ITCNPKLFYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIPIYLLISLWGGRRRLYAAT 165
Cdd:TIGR01972 80 LLLVLLTALLTLLAILASWEsIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPNRIYAAM 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 166 KFIFYTAIGSLFLFIATFTVCFYGANiaTWHFEDLAEKEYPFILEKILYLGFGFAYAVKLPIIPFHTWLPDTHGEAHYST 245
Cdd:TIGR01972 160 KFFLYTLAGSLLMLLAILGLYFLGGG--TFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVEAPTAG 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 246 CMLLAGILLKMGGYGWIRINMTLFPNAHAYFAPWLVILGTVQIIYAASVCLSQKNLKRRIAYSSISHMGFVLIGICSFTN 325
Cdd:TIGR01972 238 SVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNE 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 326 IGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIALKMPKMFSMFTGFSLASLALPTMSGFVAEMMIFLGII 405
Cdd:TIGR01972 318 LGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGSF 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 406 SSTFyspsfrcFIILFQALGVILTPIYLLSMLRQMFYGVDTFHfESMSFIDSGPREVFIIVSLFIPVIIIGLYPNILLSI 485
Cdd:TIGR01972 398 KVNP-------VVAFLAALGIVLAAAYMLTLYKRVFFGELSNP-EVAEFPDLNGREIAVLAPLVVLILFLGLYPNPLLDL 469
|
....
gi 108773212 486 WQNA 489
Cdd:TIGR01972 470 TEPS 473
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
2-491 |
1.00e-143 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 421.53 E-value: 1.00e-143
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 2 NQFPWLSIIILFPLFAAFFIPLLPSRENQTVRWYTLGICLLDFLVMSYIFgYYYDFHNSSFQFKESIEWIPTIGFKWALG 81
Cdd:PRK05846 1 MNWPLLSLLIFLPLIGGLLVLLTERFGARLARWIALIGTLLTLLLSLVLW-IGFDSSNAGFQFVEKHPWIPRFGISYHLG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 82 VDGLSMGLILLTGLVTTLAVLAAW-PITCNPKLFYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIPIYLLISLWGGRRR 160
Cdd:PRK05846 80 VDGISLLLVVLTALLTPLAVLASWeEIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWGGKNR 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 161 LYAATKFIFYTAIGSLFLFIATFTVCFYGANIA-TWHFEDLAEKEYPFILEKILYLGFGFAYAVKLPIIPFHTWLPDTHG 239
Cdd:PRK05846 160 IYAATKFFLYTLLGSLLMLVAIIYLVVVYYNATgTFDIADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAHV 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 240 EAHYSTCMLLAGILLKMGGYGWIRINMTLFPNAHAYFAPWLVILGTVQIIYAASVCLSQKNLKRRIAYSSISHMGFVLIG 319
Cdd:PRK05846 240 QAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLG 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 320 ICSFTNIGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIALKMPKMFSMFTGFSLASLALPTMSGFVAEMM 399
Cdd:PRK05846 320 IFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFL 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 400 IFLGIISSTFYspsfrcfIILFQALGVILTPIYLLSMLRQMFYGVDTfhFESMSFIDSGPREVFIIVSLFIPVIIIGLYP 479
Cdd:PRK05846 400 ILLGSFQVNPV-------IAFIATTGLILAAVYSLWLYQRVMFGPVK--NEVAKLKDLNGRELLILLPLVALLLLLGVYP 470
|
490
....*....|..
gi 108773212 480 NILLSIWQNALS 491
Cdd:PRK05846 471 KPLLDVIHPSVE 482
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
7-482 |
1.13e-96 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 300.85 E-value: 1.13e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 7 LSIIILFPLFAAFFIPLLPSREN-QTVRWYTLGICLLdFLVMSYIFGYYYDFHNSSFQFKESIEWIPTIGFKWALGVDGL 85
Cdd:PRK06473 2 LSALIWIPLLGAILIGFWPSGINgKLARSVALVIASV-LLLLSLVLAFQFDPGNPNQQFTEFIPWIDSLGLSYHLGVDGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 86 SMGLILLTGLVTTLAVLAAWPITCNPKLFYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIPIYLLISLWGGRRRLYAAT 165
Cdd:PRK06473 81 SLPLLVLNSLLTLIAIYSSDESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGGQRRGYAAT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 166 KFIFYTAIgSLFLFIATFTVCFYGANIATWHFEDLAEKEYPFILEKILYLGFGFAYAVKLPIIPFHTWLPDTHGEAHYST 245
Cdd:PRK06473 161 KFLLYTAI-SGILILVSFLGLVWLSGASSFDYEPLRSHTLPLSTQLLLLAPILVGFGIKIPLVPFHTWLPDAHVEASTPV 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 246 CMLLAGILLKMGGYGWIRINMTLFPNAHAYFAPWLVILGTVQIIYAASVCLSQKNLKRRIAYSSISHMGFVLIGICSFTN 325
Cdd:PRK06473 240 SVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATP 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 326 IGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGI---ALKMPKMFSMFTGFSLASLALPTMSGFVAEMMIFL 402
Cdd:PRK06473 320 LSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFR 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 403 GiisstfyspSFRCFII--LFQALGVILTPIYLLSMLRQMFYGVDTFHFESMSFIDSGPREVFIIVSLFIpvIIIGLYPN 480
Cdd:PRK06473 400 G---------SFPIFPVqtLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNLPRVLWSERLPALVLAVLI--VVLGIQPS 468
|
..
gi 108773212 481 IL 482
Cdd:PRK06473 469 WL 470
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
7-443 |
1.06e-83 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 267.35 E-value: 1.06e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 7 LSIIILFPLFAAFFIPLLPSR-ENQTVRWYTLGICLLDFLVMSYIFgYYYDFHNSSFQFKESIEWIPTIGFKWALGVDGL 85
Cdd:PRK07363 2 LSVLLWLPILGAIIIGFFPGNlPSARLRQITLVFAVLVLAWSLFLL-TQFDLSDPGMQFQEYLPWNEPLGLSYSLGVDGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 86 SMGLILLTGLVTTLAVLAAWPITCNPKLFYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIPIYLLISLWGGRRRLYAAT 165
Cdd:PRK07363 81 SLPLLVLNSLLTWIAIYSIGENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEKRGYASI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 166 KFIFYTAIgSLFLFIATFTVCFYGANIATWHFEDLAEKEYPFILEKILYLGFGFAYAVKLPIIPFHTWLPDTHGEAHYST 245
Cdd:PRK07363 161 KFLIYTAV-SGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLNTQLILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAV 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 246 CMLLAGILLKMGGYGWIRINMTLFPNAHAYFAPWLVILGTVQIIYAASVCLSQKNLKRRIAYSSISHMGFVLIGICSFTN 325
Cdd:PRK07363 240 AILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQ 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 326 IGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIA---LKMPKMFSMFTGFSLASLALPTMSGFVAEMMIFL 402
Cdd:PRK07363 320 LSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMnpiRGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQ 399
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 108773212 403 GIIsSTFYSPSFRCFIilfqALGviLTPIYLLSMLRQMFYG 443
Cdd:PRK07363 400 GSF-STFPIPTLLCIV----ASG--LTAVYFVILLNRTCFG 433
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
6-490 |
6.60e-71 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 233.42 E-value: 6.60e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 6 WLSIIILFPLFAAFFIPLLPSRENQTVRWYTLGICLLDFLVMSYIFGYYYdfHNSSFQFKESIEWI--PTIGFKWA---L 80
Cdd:MTH00204 2 GLSLIFLILFMGIINVMGVPRENSVKLKKRALEWSLAILFSTLVLWGAFD--GEGQFQFINLIEWIisPTLNFQWGplvF 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 81 GVDGLSMGLILLTGLVTTLAVLAAW-PITCNPKLFYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIPIYLLISLWGGRR 159
Cdd:MTH00204 80 AVDGVSLFFILLTTLLIPICILISWkSIKFLFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSRE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 160 -RLYAATKFIFYTAIGSLFLFIATFTVCfygANIATWHFEDLAEKEYPFILEKILYLGFGFAYAVKLPIIPFHTWLPDTH 238
Cdd:MTH00204 160 eKVRASYYFFFYTFAGSVFMLLGIFQLY---SITGTTDYQILLNIKLPLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAH 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 239 GEAHYSTCMLLAGILLKMGGYGWIRINMTLFPNAHAYFAPWLVILGTVQIIYAASVCLSQKNLKRRIAYSSISHMGFVLI 318
Cdd:MTH00204 237 VEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPL 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 319 GICSFTNIGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIALKMPKMFSMFTGFSLASLALPTMSGFVAEM 398
Cdd:MTH00204 317 GLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEF 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 399 MIFLGIIsstfyspSFRCFIILFQALGVILTPIYLLSMLRQMFYGVDTFHfesMSFI-DSGPREVFIIVSLFIPVIIIGL 477
Cdd:MTH00204 397 FSLLAAF-------EYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNY---LLFSrDLNRRELLAILPLIIAIFLLGI 466
|
490
....*....|...
gi 108773212 478 YPNILLSIWQNAL 490
Cdd:MTH00204 467 VPFIIIDLVKNSL 479
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-440 |
4.41e-70 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 229.65 E-value: 4.41e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 1 MNQFPWLsiIILFPLFAAFFIPLLPSRENqTVRWYTLGICLLDFLVMSYIFgyyYDFHNSSFQFKESIEWIPTIGFkwAL 80
Cdd:COG0651 1 MSHLLIL--PVLLPLLAAALLLLLGRRRR-LQRALSLLASLALLALALALL---LQVLAGGPLVYALGGWPAPFGI--VL 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 81 GVDGLSMGLILLTGLVTTLAVLAAWPITC---NPKLFYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIPIYLLISLWGG 157
Cdd:COG0651 73 VADRLSALFLLLTALVALAVLLYSIGYMRherRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGT 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 158 RRRLYAATKFIFYTAIGSLFLFIATFTVcfYGANiATWHFEDLAEK--EYPFILEKILYLGFGFAYAVKLPIIPFHTWLP 235
Cdd:COG0651 153 KEALRAGLKYLILNLVGSALFLLGVGLL--YGAT-GTLNMADLAARlaELDPGLLLAAFALLLVGFGIKAALFPLHFWLP 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 236 DTHGEAHYSTCMLLAGILLKMGGYGWIRINMTLFP-NAHAYFAPWLVILGTVQIIYAASVCLSQKNLKRRIAYSSISHMG 314
Cdd:COG0651 230 DAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIG 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 315 FVLIGICSFTNIGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIALKMPKMFSMFTGFSLASLALPTMSGF 394
Cdd:COG0651 310 YILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGF 389
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 108773212 395 VAEMMIFLGIISSTFYspsfrcFIILFQALGVILTPIYLLSMLRQM 440
Cdd:COG0651 390 VSKWLLLQAALEAGAW------LLAAVLLLSSLLTLAYFVRIFGRA 429
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
7-485 |
3.70e-68 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 226.09 E-value: 3.70e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 7 LSIIILFPLFAAFFIPLLPsRENQTVRWYTLGICLLDFLVMSYIFGYYYDfHNSSFQFKESIEWIPTI--GFKWAL-GVD 83
Cdd:MTH00217 2 LELVFILPLIGILHLLIIP-RDNIVRLKKIALEWSLLTLTATILLWASFD-GEGQFQAIKKFEWIPGIepVFGPVVfAVD 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 84 GLSMGLILLTGLVTTLAVLAAW-PITCNPKLFYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIPIYLLISLWGGRR-RL 161
Cdd:MTH00217 80 GISIFFLILTALLTPICILISWnSIKFLIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREeKV 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 162 YAATKFIFYTAIGSLFLFIATFTVCfygANIATWHFEDLAEKEYPFILEKILYLGFGFAYAVKLPIIPFHTWLPDTHGEA 241
Cdd:MTH00217 160 QASYYFFFYTFIGSVFMLLGIFTLY---SYAGTTDYQALCCLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEA 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 242 HYSTCMLLAGILLKMGGYGWIRINMTLFPNAHAYFAPWLVILGTVQIIYAASVCLSQKNLKRRIAYSSISHMGFVLIGIC 321
Cdd:MTH00217 237 PVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIF 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 322 SFTNIGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIALKMPKMFSMFTGFSLASLALPTMSGFVAEmmiF 401
Cdd:MTH00217 317 SHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGE---F 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 402 LGIISSTFYSPsfrcFIILFQALGVILTPIYLLSMLRQMFYGVDT--FHFESmsfiDSGPREVFIIVSLFIPVIIIGLYP 479
Cdd:MTH00217 394 LSLLAAFEYSY----IVGVLASLGMVLSAGYSIYLYNRVCFGAPSkyLYFSR----DLNRREFYVLLPLVFLIYLMGIFP 465
|
....*.
gi 108773212 480 NILLSI 485
Cdd:MTH00217 466 FIIIDV 471
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
73-493 |
3.40e-58 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 200.53 E-value: 3.40e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 73 TIGFKWALGVDGLSMGLILLTGLVTTLAVLAAW-PITCNPKLFYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIPIYLL 151
Cdd:MTH00226 91 IMGGPLVFAVDGISIYFIILTGFIVPCSILISWhSVKYLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLI 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 152 ISLWGGRR-RLYAATKFIFYTAIGSLFLFIATFTVcfygANI-ATWHFEDLAEKEY--PFILEKILYLGFGFAYAVKLPI 227
Cdd:MTH00226 171 LGIWGSREeKMQAAYYFFFYTLIGSVLMLLCLFSL----YNIhGTTDYLTLASCSHvvSEQTQKWIFLGIFLAMAVKIPI 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 228 IPFHTWLPDTHGEAHYSTCMLLAGILLKMGGYGWIRINMTLFPNAHAYFAPWLVILGTVQIIYAASVCLSQKNLKRRIAY 307
Cdd:MTH00226 247 FPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAY 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 308 SSISHMGFVLIGICSFTNIGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIALKMPKMFSMFTGFSLASLA 387
Cdd:MTH00226 327 SSVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVA 406
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 388 LPTMSGFVAEmmiFLGIISSTFYSPsfrcFIILFQALGVILTPIYLLSMLRQMFYGVDTFHFESMSfiDSGPREVFIIVS 467
Cdd:MTH00226 407 VPPSGNFIGE---YLSILSSFNWNP----IIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFAR--DVNRREFYITAS 477
|
410 420
....*....|....*....|....*.
gi 108773212 468 LFIPVIIIGLYPNILLSIWQNALSIL 493
Cdd:MTH00226 478 MVFFAFLIGIYPIFILEVIQNSLFFL 503
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
79-482 |
2.75e-54 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 188.61 E-value: 2.75e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 79 ALGVDGLSMGLILLTGLVTTLAVLAAWPITCNPKLFY-----FLMLVMYSGQIGLFTSQDLFLFFLMWELELIPIYLLIS 153
Cdd:MTH00206 54 YLSYDPLSSPLVILSCWLLPLMFLASQNHMKNEPINRqriyiTLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLIT 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 154 LWGGRR-RLYAATKFIFYTAIGSLFLFIATFTVCFYGANIATWHFEDLAEKEYpfiLEKILYLGFGFAYAVKLPIIPFHT 232
Cdd:MTH00206 134 RWGNQKeRLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSLYILYFSKLTTW---NNNLWWLACILAFLVKLPLYGVHL 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 233 WLPDTHGEAHYSTCMLLAGILLKMGGYGWIRINMTLFPNAHAYFAPwLVILGTVQIIYAASVCLSQKNLKRRIAYSSISH 312
Cdd:MTH00206 211 WLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILILGPSTKLSSYF-FIILGLWGSIMTSSICLRQTDLKSLIAYSSVSH 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 313 MGFVLIGICSFTNIGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIALKMPKMFSMFTGFSLASLALPTMS 392
Cdd:MTH00206 290 MSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFP 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 393 GFVAEMMIFLGIISSTFYSpsfrcfiILFQALGVILTPIYLLSMLRQMFYGVDTFHFesMSFIDSGPREVFIIVSLFIPV 472
Cdd:MTH00206 370 NLFGELLIITSLFSWSNFT-------LPLLGLGFLFTAIYSLYMFVMTQHGKTPNHL--LSLSPSSTREHLLLFLHLFPV 440
|
410
....*....|
gi 108773212 473 IIIGLYPNIL 482
Cdd:MTH00206 441 ILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
78-483 |
8.73e-53 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 184.79 E-value: 8.73e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 78 WALGVDGLSMGLILLTGLVTTLAVLAAWPI-----TCNPKLFYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIPIYLLI 152
Cdd:MTH00044 55 LSLATDSLSSPLIILSCWLAPLSLLASINHlsnnsPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILI 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 153 SLWGGRR-RLYAATKFIFYTAIGSLFLFIATFTVCFYGANIATWHFEDLAEKEYPFILEKILYLGFGFAYAVKLPIIPFH 231
Cdd:MTH00044 135 TRWGAQKeRIQAGLYFLFYTLFGSLPLLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFH 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 232 TWLPDTHGEAHYSTCMLLAGILLKMGGYGWIRINMTLFPNAHAYFAPWLVILGTVQIIYAASVCLSQKNLKRRIAYSSIS 311
Cdd:MTH00044 215 LWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLINLFSLPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVG 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 312 HMGFVLIGICSFTNIGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIALKMPKMFSMFTGFSLASLALPTM 391
Cdd:MTH00044 295 HMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPL 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 392 SGFVAEMMIFLGIISSTFYSpsfrcFIILfqALGVILTPIYLLSMLRQMFYGvdTFHFESMSFIDSGPREVFIIVSLFIP 471
Cdd:MTH00044 375 PNLIGELLIISSIISWSILS-----FPII--GLATVFGAIYSLLIYQLTNSG--SFPSWISNVSPISSREHLLIFLHLLP 445
|
410
....*....|..
gi 108773212 472 VIIIGLYPNILL 483
Cdd:MTH00044 446 LILIIINPNIIL 457
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
7-493 |
1.18e-52 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 185.08 E-value: 1.18e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 7 LSIIILFPLFAAFFIPLLPSRENqtVRWytlGICLLDFLVMSYIFGYYYDFHNSSFQFKESI-EWIPTIGFkwALGVDGL 85
Cdd:PRK08375 6 LPLLVAVPLLAAALIVLLPKRRR--LRW---ALALLVAALTFALAISLLPQVLDGGVIAYVVgGWPPGIGI--ELRADSL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 86 SMGLILLTGLVTTLAVLAAWPIT-CNPKLFYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIPIYLLISLWGGRRRLYAA 164
Cdd:PRK08375 79 SALFLLVTSILAIAALLYAIGYGeHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDRRALAAA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 165 TKFIFYTAIGSLFLFIAtftVCFYGANIATWHFEDLAEKEYPfilEKILYLGFGFAY---AVKLPIIPFHTWLPDTHGEA 241
Cdd:PRK08375 159 RKYLIVGLIGSTFLLIG---VGLLYGVTGTLNMADLAGALAE---NPTVVTAFGFVLlalALKAAVFPLHTWLPRAYPAA 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 242 HYSTCMLLAGILLKMGGYGWIRINMTLFPNAHAYFAPW---LVILGTVQIIYAASVCLSQKNLKRRIAYSSISHMGFVLI 318
Cdd:PRK08375 233 PPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRFALGLgwlLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILL 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 319 GICSFTNIGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIALKMPKMFSMFTGFSLASLALPTMSGFVAEM 398
Cdd:PRK08375 313 GLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKW 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 399 MIFLGIISSTFYSpsfrcfIILFQALGVILTPIYLLSMLRQMFYGVDTFHFESmSFIDSGPREVFIIVSLFIPVIIIGLY 478
Cdd:PRK08375 393 YLVVGAVEAGQWL------VLAVLLASSLLALLYFLRIWYRAFFGPPPPGSEA-PKQEAPLGMLAPSLALALLSLLLGIY 465
|
490
....*....|....*
gi 108773212 479 PNILLSIWQNALSIL 493
Cdd:PRK08375 466 AGPLLQLADAAAAGL 480
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
80-486 |
1.95e-50 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 177.34 E-value: 1.95e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 80 LGVDGLSMGLILLTGLVTTLAVLAAWP---ITCNPKLFYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIPIYLLISLWG 156
Cdd:MTH00150 20 FSVDSMSSLLISLSLWISGLMMLASQKsvkLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLLLILGWG 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 157 GR-RRLYAATKFIFYTAIGSLFLFIATFTVCFYGANIATWHFEDLAEKEYPFILekiLYLGFGFAYAVKLPIIPFHTWLP 235
Cdd:MTH00150 100 YQpERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMGL---WGLLVFLAFLVKLPMYPFHLWLP 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 236 DTHGEAHYSTCMLLAGILLKMGGYGWIRINMTLFPNaHAYFAPWLVILGTVQIIYAASVCLSQKNLKRRIAYSSISHMGF 315
Cdd:MTH00150 177 KAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLS-SSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSL 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 316 VLIGICSFTNIGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIALKMPKMFSMFTGFSLASLALPTMSGFV 395
Cdd:MTH00150 256 VLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNLL 335
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 396 AEMMIFLGIIsstFYSPSFrcfiILFQALGVILTPIYLLSMLRQMFYGVDTFHFEsmSFIDSGPREVFIIVSLFIPVIII 475
Cdd:MTH00150 336 SEIMIFPSLI---SYSPWF----FVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLK--PFNELKSSEMLLLLLHWVPLLLL 406
|
410
....*....|.
gi 108773212 476 GLYPNILLSIW 486
Cdd:MTH00150 407 ILKSDLLFMWI 417
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
80-437 |
1.04e-48 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 173.95 E-value: 1.04e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 80 LGVDGLSMGLILLTGLVTTLAVLAAWP-ITCNP---KLFYFLMLVMYsgQIGL---FTSQDLFLFFLMWELELIPIYLLI 152
Cdd:MTH00068 56 FGIDQISSPLLILTCWLLPLMILASQNhLKNEPinrQRTYISMLIIL--QLTLilaFSATELILFYIFFEATLIPTLIII 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 153 SLWGGR-RRLYAATKFIFYTAIGSLFLFIATFTVCFYGANIATWHFEDLAEKEYPFILEKILYLGFGFAYAVKLPIIPFH 231
Cdd:MTH00068 134 TRWGNQeERLNAGTYFLFYTLAGSLPLLIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLH 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 232 TWLPDTHGEAHYSTCMLLAGILLKMGGYGWIRINMTLFPNAHAYFAPwLVILGTVQIIYAASVCLSQKNLKRRIAYSSIS 311
Cdd:MTH00068 214 LWLPKAHVEAPIAGSMILAAVLLKLGGYGILRISILLTPLSKELSYP-FIILALWGVLMTSLICLRQTDLKSLIAYSSVS 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 312 HMGFVLIGICSFTNIGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIALKMPKMFSMFTGFSLASLALPTM 391
Cdd:MTH00068 293 HMGLVIAAALIQTPWSFSGAIILMISHGLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPS 372
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 108773212 392 SGFVAEMMIFLGIISstfYSPSfrcfIILFQALGVILTPIYLLSML 437
Cdd:MTH00068 373 PNLWGELTIMVSLFN---WSNW----TILITGLGTLITAAYTLYMF 411
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
129-437 |
1.63e-47 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 170.38 E-value: 1.63e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 129 FTSQDLFLFFLMWELELIPIYLLISLWGGR-RRLYAATKFIFYTAIGSLFLFIATFtvcFYGANIATWHFEDLAEKEYPF 207
Cdd:MTH00124 110 FSATELTLFYIMFEATLIPTLILITRWGNQpERLSAGTYFLFYTLISSLPLLIAIL---YLHNQTGTLSLPMLQLTHPTL 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 208 ILEK---ILYLGFGFAYAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGGYGWIRINMTLFPNAHAYFAPwLVILG 284
Cdd:MTH00124 187 TNSWtnlLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIIRITLLLPPLSNTLHYP-FLTLA 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 285 TVQIIYAASVCLSQKNLKRRIAYSSISHMGFVLIGICSFTNIGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEM 364
Cdd:MTH00124 266 LWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHSRTLLLT 345
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 108773212 365 GGIALKMPKMFSMFTGFSLASLALPTMSGFVAEMMiflgIISSTF-YSPsfrcFIILFQALGVILTPIYLLSML 437
Cdd:MTH00124 346 RGLQLLLPLMTTWWLLANLTNMALPPTINLMGELT----IMTSLFnWSP----TTIILTGLATLITASYTLYMF 411
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
41-483 |
1.24e-46 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 168.02 E-value: 1.24e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 41 LLDFLVMSYIFGYYYDFHNSSFQFKESIEWIPTIGFKWALGVDGLSMGLILLTGLVTTLAVLAAWPI---TCNPKLFYFL 117
Cdd:MTH00163 13 PLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVykkNNYSNLFLFL 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 118 MLVMYSGQIGLFTSQDLFLFFLMWELELIPIYLLISLWGGR-RRLYAATKFIFYTAIGSLFLFIATFtvcFYGANIATWH 196
Cdd:MTH00163 93 ILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQpERLQAGIYLLFYTLFASLPLLVGIF---YLYNNSGSLS 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 197 FedlAEKEYPFILEKILYLGFGFAYAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGGYGWIRInMTLFPNAHAYF 276
Cdd:MTH00163 170 F---FLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRV-MSFFSKLGLKF 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 277 APWLVILGTVQIIYAASVCLSQKNLKRRIAYSSISHMGFVLIGICSFTNIGLSGAICQMISHGLIGASLFFLAGTTYDRI 356
Cdd:MTH00163 246 NYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANIIYERL 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 357 RTVSLSEMGGIALKMPKMFSMFTGFSLASLALPTMSGFVAEMMIFLGIISstfYSPSFRCFIILFQALGVILTpIYLLSM 436
Cdd:MTH00163 326 GSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLIS---WSKLSMIFLMLLSFFSAAYS-LYLYSY 401
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 108773212 437 LRQMFYGVDTFHFESMSFidsgpREVFIIVSLFIPVIIIGLYPNILL 483
Cdd:MTH00163 402 SQHGKYYSGLYSCSSGKV-----REYLLLFLHWLPLNLLILKSDLFM 443
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
112-483 |
1.27e-45 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 165.45 E-value: 1.27e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 112 KLFYFLMLVMYsgQIGL---FTSQDLFLFFLMWELELIPIYLLISLWGGR-RRLYAATKFIFYTAIGSLFLFIA-TFTVC 186
Cdd:MTH00110 92 KKLYITMLILL--QLFLimtFTATELIMFYILFEATLIPTLIIITRWGNQtERLNAGLYFLFYTLVGSLPLLVAlLYIQN 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 187 FYGA-NIATWHFedLAEKEYPFILEKILYLGFGFAYAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGGYGWIRIN 265
Cdd:MTH00110 170 NLGSlNFLLLQL--WAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRIT 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 266 MTLFPNAHAYFAPWLvILGTVQIIYAASVCLSQKNLKRRIAYSSISHMGFVLIGICSFTNIGLSGAICQMISHGLIGASL 345
Cdd:MTH00110 248 IILNPLTEFMAYPFL-MLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSML 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 346 FFLAGTTYDRI--RTVSLSEmgGIALKMPKMFSMFTGFSLASLALPTMSGFVAEMMiflgIISSTFyspSFRCFIILFQA 423
Cdd:MTH00110 327 FCLANSNYERIhsRTMILAR--GLQTLLPLMATWWLLASLTNLALPPTINLIGELF----VIMSSF---SWSNITIILMG 397
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 424 LGVILTPIYLLSMLRQMFYGVDTFHFESMSfiDSGPREVFIIVSLFIPVIIIGLYPNILL 483
Cdd:MTH00110 398 LNMLITALYSLYMLITTQRGKLTHHINNIK--PSFTRENTLMALHLLPLLLLSLNPKIIL 455
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
9-484 |
1.52e-43 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 160.91 E-value: 1.52e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 9 IIILFPLFAAFFIPLLPS--RENQTV-RWYTLGICLLdfLVMSYIFGYYYDFHNSSFQFKESIEWIPTIGFkwALGVDGL 85
Cdd:PRK12667 8 LTPILLVLFAFLLPLLSIllKGNRKIqKIYALLVSLI--TLILSILLFIQVYSSNKPIVYLFGGWPAPIGI--VYEVDLL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 86 SMGLILLTGLVTTLAVLAAWPITCN---PKLFYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIPIYLLISLWGGRRR-L 161
Cdd:PRK12667 84 GALLGLLTALVMFLILIYSYWYLEHesgPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDaV 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 162 YAATKFIFYTAIGSLFLFIATftVCFYGAnIATWHFEDLAEK--------EYPFILEKILYLGFGFAYA-----VKLPII 228
Cdd:PRK12667 164 EAAIKYALIGAVGTTLYFLAL--AFLYAT-FGTLNMADLSAKirglsfplTGGLAGNPPLALGVALALAlwaftIKAAIF 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 229 PFHTWLPDTHGEAHYSTCMLLAGILLKMGGYGWIRINMTLF------PNAHAYFAPWLVILGTVQIIYAASVCLSQKNLK 302
Cdd:PRK12667 241 PNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFgispslIDFRAALSPILIILGAVSAIIGALMMVVQKDVK 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 303 RRIAYSSISHMGFVLIGICSFTNIGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIALKMPKMFSMFTGFS 382
Cdd:PRK12667 321 RLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLIGA 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 383 LASLALPTMSGFVAEMMIFLGIISSTFYspsfrcfiiLFQALGVILTPIYLLSMLRQMF--------YGVDTFHFESMSF 454
Cdd:PRK12667 401 LSLVGIPPLNGFFSKLLLFNALLESGFY---------LPALVLLIASAISLVGYFRAWYslffgkpkSGEEVEHKESPSM 471
|
490 500 510
....*....|....*....|....*....|....
gi 108773212 455 idsgpreVFIIVSLFIPVIIIGLY----PNILLS 484
Cdd:PRK12667 472 -------SVVILVLALAVLILGILalflPEILDS 498
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
80-437 |
1.59e-43 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 159.74 E-value: 1.59e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 80 LGVDGLSMGLILLTGLVTTLAVLA-----AWPITCNPKLFYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIPIYLLISL 154
Cdd:MTH00127 57 MATDPLSTPLLVLTCWLLPLMILAsqnhtAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITR 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 155 WGGR-RRLYAATKFIFYTAIGSLFLFIATFTVCFYGANIATWHFEDLAEKEYPFILEKILYLGFGFAYAVKLPIIPFHTW 233
Cdd:MTH00127 137 WGNQtERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLW 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 234 LPDTHGEAHYSTCMLLAGILLKMGGYGWIRINMTLFPNAHAYFAPWlVILGTVQIIYAASVCLSQKNLKRRIAYSSISHM 313
Cdd:MTH00127 217 LPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYPF-IILALWGIIMTGSICLRQTDLKSLIAYSSVSHM 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 314 GFVLIGICSFTNIGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIALKMPKMFSMFTGFSLASLALPTMSG 393
Cdd:MTH00127 296 GLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPN 375
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 108773212 394 FVAEMMiflgIISSTFyspSFRCFIILFQALGVILTPIYLLSML 437
Cdd:MTH00127 376 LMGELM----IITSLF---NWSPWTLALTGLGTLITAGYSLYMF 412
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
131-407 |
8.24e-43 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 153.62 E-value: 8.24e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 131 SQDLFLFFLMWELELIPIYLLISLWGGR-RRLYAATKFIFYTAIGSLFLFIATFTVcfYGANiATWHFEDL---AEKEYP 206
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSpRSSEAGMKYFLLTLLGSSILLFGISLM--YNYT-GTLSFDELskaLTGGLN 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 207 FILEKILYLGFGFAYAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGGYGWIRINMTLFPNAHAYfAPWLVILGTV 286
Cdd:pfam00361 78 SSGLLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFI-QQILLILAII 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 287 QIIYAASVCLSQKNLKRRIAYSSISHMGFVLIGICSFTNIGLSGAICQMISHGLIGASLFFLAGTT-YDRIRTVSLSEMG 365
Cdd:pfam00361 157 SMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSViYRRVHTRNIRDYG 236
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 108773212 366 GIALKMPKMFSMFTGFSLASLALPTMSGFVAEMMIFLGIISS 407
Cdd:pfam00361 237 GLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAA 278
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
71-484 |
4.08e-41 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 152.97 E-value: 4.08e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 71 IPTIGFKWALGVDGLSMGLILLTGLVTTLAVLAAWPITCN---PKLFYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIP 147
Cdd:MTH00014 46 APYSMFTESLSSDMLSAPLITLTLWITALMILASFKIFQNnkaPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIP 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 148 IYLLISLWGGR-RRLYAATKFIFYTAIGSLFLFIATFTVCFYGANIATWHFEDLAEKEYPFILEKILYLGfgfAYAVKLP 226
Cdd:MTH00014 126 TLFLILGWGYQpERLQASFYLMIYTVTASLPLLMSILLIFYTNNSLSMLMSSMEPPSIYLMNLWWLITIL---AFMVKMP 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 227 IIPFHTWLPDTHGEAHYSTCMLLAGILLKMGGYGWIRINmTLFPNAHAYFAPWLVILGTVQIIYAASVCLSQKNLKRRIA 306
Cdd:MTH00014 203 LYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRMS-SLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIA 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 307 YSSISHMGFVLIGICSFTNIGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIALKMPKMFSMFTGFSLASL 386
Cdd:MTH00014 282 YSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANM 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 387 ALPTMSGFVAEMMIFLGIISSTFyspsfrcFIILFQALGVILTPIYLLSMLRQMFYGVDTFHFESMSFIDsgPREVFIIV 466
Cdd:MTH00014 362 AAPPSINLLSEIMLLTSILSSSL-------STAILLAITSFLAAAYSLFLYTSTQHGSPPSFMNPLNLFT--PRNHTLMT 432
|
410
....*....|....*...
gi 108773212 467 SLFIPVIIIGLYPNILLS 484
Cdd:MTH00014 433 LHLVPLFILILKPDLITN 450
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
80-482 |
5.49e-39 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 147.05 E-value: 5.49e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 80 LGVDGLSMGLILLTGLVTTLAVLAAWPI---TCNPKLFYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIPIYLLISLWG 156
Cdd:MTH00205 53 FSFDSLSLPLIMLSFWISLLMVLASYKVfksNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWG 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 157 GR-RRLYAATKFIFYTAIGSLFLFIATFtvcFYGANIATWHFEDLAEKEYPFILEKILYLGFGFAYAVKLPIIPFHTWLP 235
Cdd:MTH00205 133 YQpERLQASMYMMMYTLCASLPLLIGLF---FLNSLNFSLSMFFNFPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLP 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 236 DTHGEAHYSTCMLLAGILLKMGGYGWIRINMTLFPNaHAYFAPWLVILGTVQIIYAASVCLSQKNLKRRIAYSSISHMGF 315
Cdd:MTH00205 210 KAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKL-NSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGL 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 316 VLIGICSFTNIGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIALKMPKMFSMFTGFSLASLALPTMSGFV 395
Cdd:MTH00205 289 MVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLA 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 396 AEMMIFLGIISSTFYSPSFRCFIILFQAlgviltpIYLLSMLRQMFYGVDTFHFESMSFIDSgpREVFIIVSLFIPVIII 475
Cdd:MTH00205 369 SEILLIMSLLSSSKISGIPLSLISFLSG-------AYSLYLYSQSQHGKVSSQISSFLAISE--REYYILILHWFPLNIL 439
|
....*..
gi 108773212 476 GLYPNIL 482
Cdd:MTH00205 440 ILKLKIF 446
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-484 |
3.21e-35 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 137.92 E-value: 3.21e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 1 MNQFPWLSIIILFPLFAAFFIPLLpSRENQTVR--WYTLgICLLDFLVMSYIFGYYYDFHNSSFQF-KESIEWIPTIG-- 75
Cdd:PRK08376 1 VLGEHLPPLLIIIPLFGAFSMPIV-SLLGGKAReiWAVL-ISFLTLIVALLVFYEVWNNGTIVYVLgAESPTLTLPFGsg 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 76 ---FKWALGVDGLSMGLILLTGLVTTLAVLaaWPITCNPKL-----FYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIP 147
Cdd:PRK08376 79 gfpIRIIWEVDLFGAFMALIATIVSFLAVL--YSISYMKHDtgldkYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIA 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 148 IYLLISLWGGR-RRLYAATKFIFYTAIGSLFLFIAtftVCFYGANIATWHFEDLAEK--EYPFILEKILYLGFGFAYAVK 224
Cdd:PRK08376 157 SYALVAFRNDTwEAIEAGIKYMFVGSLASSMVLLG---IALLYGQYGTLNMAYLAVKmsENPTVVAKIALALFIAGLAMK 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 225 LPIIPFHTWLPDTHGEAHYS-TCMLLAgilLKMGG-YGWIRINMTLF-PNAHAYFAPWLV-ILGTVQIIYAASVCLSQKN 300
Cdd:PRK08376 234 SGAVPVHMWLPDAYPAAPSSiSAMLLV---IKQAGlYALARVLFSIYgPAINLATVGWVIiILGCLTMFVGVAMAVVQKD 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 301 LKRRIAYSSISHMGFVLIGI------------CSFTNIGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIA 368
Cdd:PRK08376 311 VKRLLAYHSVSQIGYMLLGLgvglaalgdpamASYGEIALAGGIYHIVNHALYKALLFLTAGAVIYETGTRNLNELGGLA 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 369 LKMPKMFSMFTGFSLASLALPTMSGFVAEMMIFLgiiSSTFYSPsfrcFIILFQALGVILTPIYLLSMLRQMFYGVDTFH 448
Cdd:PRK08376 391 RTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYE---SSALFNP----ILGVIAMIGSVLTLASFVKVFHTAFFGPPSEK 463
|
490 500 510
....*....|....*....|....*....|....*.
gi 108773212 449 FESMSfiDSGPREVFIIVSLFIPVIIIGLYPNILLS 484
Cdd:PRK08376 464 VMNVK--EPPKPMLVPMLILAIAIIGMGLFPWQISD 497
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
7-418 |
1.01e-33 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 134.35 E-value: 1.01e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 7 LSIIILFPLFAAFFIPLLpsrenQTVRWY--TLGICLLDFLVMSYIFGYYYDFHNSSFQFkesiewipTIGFKWALGVDG 84
Cdd:PRK08668 3 LTLLLLTPLIGSVLAYLL-----KKINEKigVIGNALPLLFLIKLYFTLKVGTGEKLTLF--------FGGFKLTFTLTH 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 85 LSMGLILLTGLVTTLAVLAAWPI-TCNPKLFYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIPIYLLIsLWGGRRRLYA 163
Cdd:PRK08668 70 LSWFFAMISLLVIFSVAFFMVSEkTKNDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMV-PMGKKESRKA 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 164 ATKFIFYTAIGSLFLFIATFTVCFYganIATWHFEDLA-----EKEYPFILEKILYL-GFGFAyavKLPIIPFHTWLPDT 237
Cdd:PRK08668 149 SLKYFVLSAIGAYAMLYAIFLIYAK---TGTFDFADISqglinDTSTGFALIVFLFLlAFGVA---KAGIFPLHVWAPDA 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 238 HGEAHYSTCMLLAGILLKMGGYGWIrINMTLFPNA-----------HAYFAPWLVILGTVQIIYAASVCLSQKNLKRRIA 306
Cdd:PRK08668 223 YSEAPQSFSAVLSGQLSKLGAYGFL-LVLYVLPGTklfsefgtyrgVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIA 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 307 YSSISHMGFVLIGICSFTNIGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIALKMPKMFSMFTgFSLASL 386
Cdd:PRK08668 302 YSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTKISEMGGLIEKMPFTFAMYL-VAIISL 380
|
410 420 430
....*....|....*....|....*....|...
gi 108773212 387 A-LPTMSGFVAEMMIFLGIISSTFYSPSFRCFI 418
Cdd:PRK08668 381 AgIPPMSGFASKWLIFEALISKGMPITAFMAFF 413
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
9-406 |
5.17e-32 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 127.76 E-value: 5.17e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 9 IIILFPLFAAFFIPLLPSREnqtvRWYTLGICLLDFLVMSYIFGyyydfhnssfqFKESIEWIPTIGFKWALGVDGLSMG 88
Cdd:PRK07234 7 VWIALPFLLGFAIYLLPKLD----RNLALGMAIVSAVYALGLVA-----------SMVPLELTLLDNFGVTLRADALSGY 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 89 LILLTGLVTTLAVLAAWpiTCNPKLFYFLMLVMYSGQIGL-FTSQDLFLFFLMWELELIPIYLLISLWGGRRRLYAATKF 167
Cdd:PRK07234 72 FILTNALVTLAVIFYCW--ESAKTRFFYAQLLILHGSVNAaFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRY 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 168 IFYTAIGSLFLFIATFTVcfYGANiATWHFEDLAEKEyPFILeKILYLGFGfayaVKLPIIPFHTWLPDTHGEAHYSTCM 247
Cdd:PRK07234 150 LFYSNVAMLFYLIGAVLV--YQAN-GTFAFSGLATAD-PEAF-ALIALGLL----VKGGIFVSGLWLPLTHSEAEPPVSA 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 248 LLAGILLKMGGYGWIRINMTLFPnahayFAPWLVILGTVQIIYAASVCLSQKNLKRRIAYSSISHMGFVLIGicsftniG 327
Cdd:PRK07234 221 LLSGVVVKAGVFPLVRCALDVPG-----LDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAA-------P 288
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 328 LSGAICQmISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIALKMPkmfsmftgFSLASLA---LPTMSGFVAEMMIFLGI 404
Cdd:PRK07234 289 LVGGLYA-LAHGLVKSTLFLCAGALPSRNFTELISQMLGIGKWIP--------LTMASFSiagFPLLAGFVSKVLTLKNL 359
|
..
gi 108773212 405 IS 406
Cdd:PRK07234 360 LP 361
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
1-489 |
1.81e-30 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 123.72 E-value: 1.81e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 1 MNQFPwlSIIILFPLFAAFFIPLLPSRENQTVRWYTLGICLLDFLVMSYIFGYYYDFHNSSFQFKESieWIPTIGFKWAL 80
Cdd:PRK08377 1 MSQYA--SLLIALPLISAFFVPVIKGIGKSAVRYYLILITLLQTGIAGWVFMEVYTTGKPIIIMAGG--WKPPVGINLYI 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 81 GVDGLSMGLIL-LTGLVTTLAVLAAW---PITCNPKLFYFLMLvmysGQIGLFTSQDLFLFFLMWELELIPIYLLISLWG 156
Cdd:PRK08377 77 GPFAALFVLIIaIVSFIMSIFSLKAVevePIDKYAMLFLLLML----GATGMIATGDIFNLFVFMEITAITAYALTAYNK 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 157 GRRRLYAATKFIFYTAIGSLFLFIATFTVCFYGANIATWHFEDLAEKEYPFILEKILYLGFgFAYAVKLPIIPFHTWLPD 236
Cdd:PRK08377 153 TGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGTIDPTVAQVGLALLI-FGLAVEAELFPLNAWAPD 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 237 THGEAHYSTCMLLAGILLKMGGYGWIRINMTLF-PNAHAYFAPWLVILGTVQIIYAASVCLSQKNLKRRIAYSSISHMGF 315
Cdd:PRK08377 232 AYQAAPHPITVMFSAFVVKAGLYAMARILYLMQnANGWSSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGM 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 316 VLIGICSFTNIGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIALKMPKMFSMFTGFSLASLALPTMSGFV 395
Cdd:PRK08377 312 IALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFW 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 396 AEMMIFLGIISSTFYSPsfrcfIILFQALGVIlTPIYLLSMLRQMFYGvdtfhfESMSFIDSGPREVFIIVSLFIPVIII 475
Cdd:PRK08377 392 SKFRIILAGLSAGYTWP-----VALVLGASVV-EAVYYFRLIHTMWFK------GEGERIRENAAIGIILLLLAALIVVI 459
|
490
....*....|....
gi 108773212 476 GLYPNILLSIWQNA 489
Cdd:PRK08377 460 GIYPTPFWEVVQKA 473
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
9-490 |
1.96e-29 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 120.61 E-value: 1.96e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 9 IIILFPLFAAFFIPLLPSRENQTVRWYTLGICLLDFLVMSYIFGYYydfhnssfqfkesiewiPTIGFKWALGVDGLSMG 88
Cdd:COG1007 12 ILLLGALVLLLLDLFLPRRSRRLLAGLALLGLLLALALLLLALGGG-----------------TGTAFGGMFVVDGFALF 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 89 LILLTGLVTTLAVLAAWPITCNPKL----FYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIPIYLLISLWGGRRR-LYA 163
Cdd:COG1007 75 FKLLILLAALLVLLLSRDYLERRGLlrgeFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRsSEA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 164 ATKFIFYTAIGS-LFLFIATFtvcFYGAnIATWHFEDLAEK-EYPFILEKILYLGFGF---AYAVKLPIIPFHTWLPDTH 238
Cdd:COG1007 155 ALKYFLLGALSSgFLLYGISL---LYGA-TGSLNLAGIAAAlAAGGANSPLLLLGLVLvlaGLAFKLSAVPFHMWTPDVY 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 239 GEAHYSTCMLLAGILlKMGGYGW-IRINMTLFPNAHAYFAPWLVILGTVQIIYAASVCLSQKNLKRRIAYSSISHMGFVL 317
Cdd:COG1007 231 EGAPTPVTAFLATAP-KIAAFAAlLRLLVEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLL 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 318 IGICSFTNIGLSGAICQMISHGLIGASLF-FLAGTTYDRIRTVSLSEMGGIALKMPKMFSMFTgFSLASLA-LPTMSGFV 395
Cdd:COG1007 310 LGLAAGTPLGVSAALFYLLAYLFMNLGAFaVILLLSRKGGEAEEIEDLAGLARRSPLLALAMT-IFLLSLAgIPPTAGFF 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 396 AEMMIFLGIISSTFYSPSFrcFIILFQALGViltpIYLLSMLRQMFygvdtFHFESMSFIDSGPREVFIIVSLF-IPVII 474
Cdd:COG1007 389 GKFYVFSAAVEAGLYWLAV--IAVLNSVISA----YYYLRVVKAMY-----FDEPEEEAPISAPPGLRVALVIAaLLVLL 457
|
490
....*....|....*.
gi 108773212 475 IGLYPNILLSIWQNAL 490
Cdd:COG1007 458 LGIFPGPLLDLAAAAA 473
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
3-485 |
1.39e-27 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 115.22 E-value: 1.39e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 3 QFPWLSIIIlfPLFAAFFIPLLpsRENQTVRWYTLGICLLDFLVMSYIFGYYYDFHNSSFQFKEsieWIPTIGFKwaLGV 82
Cdd:PRK12662 4 HLPILQVII--PLLSAVVCALL--KNRKLVKIISCIVVAVSFFIALVLFVQVYSGGVIKYSLGG---WGPPYGIE--LRV 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 83 DGLSMGLILLTGLVTTLAVLaaWPITCNPK--------LFYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIPIYLLISL 154
Cdd:PRK12662 75 DILSATMLVLVNFIAVMSVL--YGIYPNRKeisvnkipSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAM 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 155 WGGRRRLYAATKFIFYTAIGSLFLFIAtftVCFYGANIATWHFEDLAEKEYPFILEKILYLGFGFAY---AVKLPIIPFH 231
Cdd:PRK12662 153 GRDKKALVAAFEYLIIGTIGATFYLIG---IGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGVLFIMvglFIKAALFPFH 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 232 TWLPDTHGEAHYSTCMLLAGILLKMGGYGWIRINMTLFPNAHAY----FAPWLVILGTVQIIYAASVCLSQKNLKRRIAY 307
Cdd:PRK12662 230 KWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVFKANFVFttlpFNNVFMILAALAIVFGSVLAILSKDIKRIFAY 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 308 SSISHMGFVLIGICSFTNIGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIALKMPKMFSMFTGFSLASLA 387
Cdd:PRK12662 310 SSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPKITLAFVLLSLSLIG 389
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 388 LPTMSGFVAEMMIFLGIISSTFYspsfrcFIILFQALGVILTPIYLLSMLRQMFYGVDTFHFESMSFIDSGPRE-VFIIV 466
Cdd:PRK12662 390 MPPTSGFVAKWYILDAFIKSNAW------IGLVVLLVGSGLSVIYVWKIVEALYFESRMVESKANDKAFKTPNAmVLCIW 463
|
490
....*....|....*....
gi 108773212 467 SLFIPVIIIGLYPNILLSI 485
Cdd:PRK12662 464 IMAILSIIVGIYPIPLTLI 482
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
6-443 |
4.54e-27 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 114.86 E-value: 4.54e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 6 WLSIIILFPLFAAFFIPLLPSRE-NQTVRWYTLGICLLDFLVMSYIFgyyYDFHNSSFQfKESIEWIPTIGFKWALG--V 82
Cdd:COG1009 3 LLWLIPLLPLLGALLAGLLGRRLgRRAAGWLAALAPLAAFVLSLLLF---PAVLGGEVV-VELYTWIPVGSLGLDFGfrL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 83 DGLSMGLILLTGLVTTLAVL-AAWPITCNPKL--FYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIPIYLLISLWGGRR 159
Cdd:COG1009 79 DGLSLLMLLLVTGVGLLVHIySIGYMSGDPGLarFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKP 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 160 R-LYAATKFIFYTAIGSLFLFIATFTVcfyGANIATWHFEDLAEKEyPFILEKILYLGFGFAYAV----KLPIIPFHTWL 234
Cdd:COG1009 159 SaRRAARKAFLVTRVGDLGLLLGILLL---GAIAGTLNFSELLAAA-PTILSSPLLTLILLLLLLgafgKSAQFPLHFWL 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 235 PDTHgEA--------HYSTcMLLAGI-LLkmggygwIRIN--MTLFPNAHayfaPWLVILGTVQIIYAASVCLSQKNLKR 303
Cdd:COG1009 235 PDAM-EGptpvsallHAAT-MVKAGVyLL-------ARLSplFALSPVWL----TVVAIIGAITALFAALIALAQTDIKR 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 304 RIAYSSISHMG--FVLIGICsftniGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIALKMPKMFSMFTGF 381
Cdd:COG1009 302 VLAYSTVSQLGymFLALGVG-----AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFLIG 376
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 108773212 382 SLASLALPTMSGFVAEMMiflgIISSTFYSPSFRCFIILFQALGVILTPIYLLSMLRQMFYG 443
Cdd:COG1009 377 ALSLAGIPPFAGFFSKEA----ILEAALEAGGLGPLLLAVALLGAFLTAFYSFRLFFLVFFG 434
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
7-493 |
8.69e-27 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 113.10 E-value: 8.69e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 7 LSIIILFPLFAAFFIPLLPSRENqtVRWYTLGICLLDFLVmsyifgyyydfhnSSFQFKESIEWIPTIGFKWALGVDGLS 86
Cdd:PRK06458 7 FALLLLIPLLASLLLFALRKRRL--VATLNVLGITLTLIL-------------ALWLVFTVPDAGEIFAAGLWFFIDDLN 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 87 MGLILLTGLVTTLAVL----------AAWPITCNPKLFYFLMLvmysgQIGLFTSqdLFLFF-----LMW---ELELIPI 148
Cdd:PRK06458 72 VFFLALIGVVGFLTSLysigymrhevEHGELSPVTLRLYYGMY-----QLFLFTM--LLALTsnnlgLMWvaiEATTLSS 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 149 YLLISLWGGRRRLYAATKFIFYTAIGSLFLFIATFTVCFYGANI-----ATWHFEDLAEKEyPFILEKILYLGFGFA--- 220
Cdd:PRK06458 145 ALLVGIYRTRASLEAAWKYIIICSVGVAFALFGTILVYANAATVmgdgeMAILWTELLKHA-SLLDPTLMKLAFVFLlig 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 221 YAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGGYGWIRINMTLFPNAHAYFA-PWLVILGTVQIIYAASVCLSQK 299
Cdd:PRK06458 224 FGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDAAIGSDFPgRLLLIFGLLSVLVAAFFLLRQR 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 300 NLKRRIAYSSISHMGFVLIGICSFTNIGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIALKMPKMFSMFT 379
Cdd:PRK06458 304 DIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLM 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 380 GFSLASLALPTMSGFVAEMMiflgIISSTFYSPSFRCFIILFQALGVILtpIYLLSMLRQMFYGVDTfhfESMSFIDSGP 459
Cdd:PRK06458 384 LGALAIAGMPPFGVFISEFL----ILTAGLARGPLLIAILLLLLLTLAF--AALVRRVAGMVFGEPP---EAVNRGDLGW 454
|
490 500 510
....*....|....*....|....*....|....*
gi 108773212 460 REVFIIVSLFIPVIIIGLY-PNILLSIWQNALSIL 493
Cdd:PRK06458 455 LTTSPMFVHLVLVLVLGLYiPQPLVRWLQQAATIV 489
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
70-489 |
1.61e-26 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 112.35 E-value: 1.61e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 70 WIPTIGFkwALGVDGLSMGLILLTGLVTTLAV---LAAWPITCNPKLFYFLMLVMYSGQIGLFTSQDLFLFFLMWELELI 146
Cdd:PRK12663 65 WLPPFGI--QFTGDSLSALMVTTASFVATAIMaygFGDIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLI 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 147 PIYLLISLWGGRRRLYAATKFIFYTAIGSLFLFIAtftVCFYGANIATWHFEDLAEK------EYPFILEKILYLgfgFA 220
Cdd:PRK12663 143 ASFVLITLGQEREQLRGAIKYVVLNLIGSWLFLLG---IGLLYGTFGTLNMAHIAMRlndmgdTATLTTIALLFL---LA 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 221 YAVKLPIIPFHtWLPDTHGEAHYSTCMLLAGILLKMGGYGWIRINMTLFPNAHAYFAPWLVILGTVQIIYAASVCLSQKN 300
Cdd:PRK12663 217 FGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKD 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 301 LKRRIAYSSISHMGFVLIGICSFTNIGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIALKMPKMFSMFTG 380
Cdd:PRK12663 296 IRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLI 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 381 FSLASLALPTMSGFVAEMMIFLGIISSTFYspsfrcFIILFQALGVILTPIYLLSMLRQMFYGVDTfhFESMSFIDSGPR 460
Cdd:PRK12663 376 LIFAIGGLPPFSGFWGKVLLVQGALDNGAY------ILLALMLITSLITMYSLFRIFFLAYWGDKD--GEEVNFKPIPLY 447
|
410 420
....*....|....*....|....*....
gi 108773212 461 EVFIIVSLFIPVIIIGLYPNILLSIWQNA 489
Cdd:PRK12663 448 RKLPLSILAVVVIAMGIAAEPLLNLTQDA 476
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
9-490 |
5.84e-26 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 110.30 E-value: 5.84e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 9 IIILFPLFAAFFIPLLPSRENQTVRWYTLGICLL--DFLVMSYIFGYYYDFHNssfqfkesiewiptigfkwALGVDGLS 86
Cdd:PRK05777 15 LILLGAAVVLLLIDAFVRRHSRRATLAVLALLLAlvALLFVLGAAGGGTAFGG-------------------MLVVDGFA 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 87 MGLILLTGLVTTLAVLAAWPITCNPKLFYFLMLVMYS--GQIGLFTSQDLFLFFLMWELELIPIYLLISLWGGRRR-LYA 163
Cdd:PRK05777 76 LFLKGLILLASLLALLLARPYLEDRGRGEFYLLVLFAllGMMVMVSANDLLTLFLGLELLSLPLYALAALRRDRRRsLEA 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 164 ATKFIFYTAIGS-LFLFIATFtvcFYGAnIATWHFEDLAEK-EYPFILEKILYLGFGF---AYAVKLPIIPFHTWLPDTH 238
Cdd:PRK05777 156 AIKYFVLGALASgFLLYGMSL---LYGA-TGSLSFAGIAKAlADGSGNSLLLLFGLVFllvGLAFKLSAVPFHMWTPDVY 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 239 GEAHYSTCMLLAGILlKMGGYGWI-RINMTLFPNAHAYFAPWLVILGTVQIIYAASVCLSQKNLKRRIAYSSISHMGFVL 317
Cdd:PRK05777 232 EGAPTPVTAFLATAP-KIAAFAVLlRLLVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLL 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 318 IGICSFTNIGLSGAICQMISHGLIGASLF-FLAGTTYDRIRTVSLSEMGGIALKMPKMFSMFTGFSLASLALPTMSGFVA 396
Cdd:PRK05777 311 VGLAAGTAEGYSAVLFYLLAYLFMTLGAFgVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWG 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 397 EMMIFLGIISSTFYspsfrcfiiLFQALGVILTPI---YLLSMLRQMFYGvDTFHFESMSFIDSGPREVFIIVSLFipVI 473
Cdd:PRK05777 391 KFYVFEAAVEAGLW---------WLAVIGVLNSAIgafYYLRVIKLMYFD-EPPRDAPVNWPLSAGGAVLSVSALL--VL 458
|
490
....*....|....*..
gi 108773212 474 IIGLYPNILLSIWQNAL 490
Cdd:PRK05777 459 VLGIFPQPLLDLAAQAI 475
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
110-402 |
4.76e-25 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 107.92 E-value: 4.76e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 110 NPKLFYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIPIYLLISLWGGRRRLYAATKFIFYTAIGSLFLFIAT---FTVC 186
Cdd:PRK08676 100 NLKVFYLGFNLLLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAMIFAFIGLiflFSLT 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 187 FYGANIATWHFEDLAEkEYPFILEKILYLGFGF---AYAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGGYGWIR 263
Cdd:PRK08676 180 RQALGTGTLNWTELAA-HASLLSPSVLGASFLFifiGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILR 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 264 INMTLFPN-AHAYFAPWLVILGTVQIIYAASVCLSQKNLKRRIAYSSISHMGFVLIGICSFTNIGLSGAICQMISHGLIG 342
Cdd:PRK08676 259 LSALLRQSgAAEQFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVK 338
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 343 ASLFFLAGTTYDRIRTVSLSEMGGIALKMPKMFSMFTGFSLASLALPTMSGFVAEMMIFL 402
Cdd:PRK08676 339 SGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILL 398
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
83-443 |
1.19e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 106.57 E-value: 1.19e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 83 DGLSMGLILLTGLVTTLAVLAAWPITCNPK---LFYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIPIYLLISLWGGRR 159
Cdd:PRK07691 76 DMFAALLVLTSSIITFLVILYSFQTIGIEReryYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTKI 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 160 RLYAATKFIFYTAIGSLFLFIAtftVCFYGANIATWHFEDLAEKEYPFILEK-----ILYLGFGFAYAVKLPIIPFHTWL 234
Cdd:PRK07691 156 QLRESIKYVLINVVSSAFFVVA---VAILYSVVGTLNMADISVKIAELSAGQtglitVVAILFLFVFATKAGLFPLYFWL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 235 PDTHGEAHYSTCMLLAGILLKMGGYGWIRINMTLFPNAHAYFAPWLVILGTVQIIYAASVCLSQKNLKRRIAYSSISHMG 314
Cdd:PRK07691 233 PGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVG 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 315 FVLIGICSFTNIGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIALKMPKMFSMFTGFSLASLALPTMSGF 394
Cdd:PRK07691 313 VILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGF 392
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 108773212 395 VAEMMIFLGIISSTFYSPSfrcFIILFQALgviltpIYLLSMLRQMFYG 443
Cdd:PRK07691 393 YGKFFIVEGTFEAGFYVSG---IIVLLSSL------LVLYSVIKIFLKG 432
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
7-482 |
1.07e-23 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 104.93 E-value: 1.07e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 7 LSIIILFPLFAAFFIPLL-PSRENQTVRWYTLGICLLDFLVMSYIFGYYydfhNSSFQFKESIEWIPTIGFKWALGVDGL 85
Cdd:TIGR00940 1 LHSAFILPPFAASLIPILyPSDQRIHIGWFVLAIPLVCFLYTLGLYPYT----ASGGVLHYTIDWVPELGLNFTLYMDGL 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 86 SMGL-ILLTGLVTTLAVLAAWPITCNPKL--FYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIPIYLLISLWGGRRR-L 161
Cdd:TIGR00940 77 ALLFsLLITGIGVLVVLYSIYYLSKEEPLpnFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRAHsR 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 162 YAATKFIFYTAIGSLFLF-----IATFTVCFYGANIATWHFEDLAEKEYPFILEKILYLGFgfayaVKLPIIPFHTWLPD 236
Cdd:TIGR00940 157 YGAQKSLTITVFGGLAMLgglilLGKITGSFSIDAVIASADAIRNSPLFGTAMVLVLLGAF-----TKSAQFPFHIWLPD 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 237 THGEAHYSTCMLLAGILLKMGGYGWIRInMTLFPNAHAYFapWLVIL-GTVQIIYAASVCLSQKNLKRRIAYSSISHMGF 315
Cdd:TIGR00940 232 AMEAPTPVSAYLHSATMVKAGLYLLARF-TPVFAGTEAWF--WIVGLaGLITLLWGSYFAIFQQDLKGILAFSTISQLGL 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 316 --VLIGICS-----------FTNIGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIALKMPKMFSMFTGFS 382
Cdd:TIGR00940 309 imVLLGLGSpsyhyqgddskIYALAAVAAVFHLINHATFKGSLFMAAGIIDHETGTRDIRKLGGLFHIMPITFTLAMIAS 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 383 LASLALPTMSGFVAEMMIFLGIISSTFYSP-SFRCFIILFQALGVI---LTPIYLLSMLRQMFYGvdTFHFESMsfiDSG 458
Cdd:TIGR00940 389 AAMAGVPPFNGFLSKEMFFAEAITAHLVNPfDTVTLGYLFPYVATVasvFTFVYSLRFIHGVFFG--RPKPEDL---PRK 463
|
490 500
....*....|....*....|....*....
gi 108773212 459 PREVFI-----IVSLFIPVIIIGLYPNIL 482
Cdd:TIGR00940 464 PHEPPRwmlasPDILVLLVLVFGLFPAQL 492
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
70-401 |
1.08e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 103.89 E-value: 1.08e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 70 WIPTIGFkwALGVDGLSmGLILLTGLVTTLAVLA------------AWPITcnpkLFY--FLMLVMysGQIGLFTSQDLF 135
Cdd:PRK12665 64 WDAPIGI--TLVVDRLS-ALMLVVSSVVLLAVLVyaigqgirdgdeEQPVS----IFLptYLILVA--GVSNAFLAGDLF 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 136 LFFLMWELELIPIYLLISLWGGRRRLYAATKFIFYTAIGSLFLFIATFTVcfYGAnIATWHFEDLAEK--EYPFILEKIL 213
Cdd:PRK12665 135 NLYVGFEILLVASYVLLTLGATAARVRAGVTYVMVSMVSSLLFLIGIALV--YAA-TGTLNMADLAVRldELPSGTRTAL 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 214 YLGFGFAYAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGGYGWIRINMTLFPNAHAYFAPWLVILGTVQI-IYAA 292
Cdd:PRK12665 212 FAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVgILGA 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 293 svcLSQKNLKRRIAYSSISHMGFVLIGICSFTNIGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIALKMP 372
Cdd:PRK12665 292 ---IAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASP 368
|
330 340
....*....|....*....|....*....
gi 108773212 373 KMFSMFTGFSLASLALPTMSGFVAEMMIF 401
Cdd:PRK12665 369 LLAVLFFVPALNLGGIPPFSGFIGKVALL 397
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
70-424 |
1.40e-22 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 101.35 E-value: 1.40e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 70 WIPTIGFKWALGVDGLSMGLILLTGLVTtlAVLAAWPITCNPKLFYFLMLVMYSGQIGLF--------TSQDLFLFFLMW 141
Cdd:PRK08667 63 WGIAPGLDITFHIDRLAAFFIILIGLVS--LCVAIYSLGYNEHMSSNERANLLSALTALFilsmlgvvASANTFSFLFFW 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 142 EL-ELIPIYLLISLWGGRRRLYAATKFIFYTAIGSLFLFIATFTVcfygaNIATWHFEdLAEKEYPFILEKILYLGFGFA 220
Cdd:PRK08667 141 EImALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVL-----FIQTGSFE-LSPLGASAGILSLVFLLLFLG 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 221 YAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGGYGWIRINMTLFpNAHAYFAPWLVILGTVQIIYAASVCLSQKN 300
Cdd:PRK08667 215 FGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVL-SPELWWGVLILLAGSISALLGVIYALKEHD 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 301 LKRRIAYSSISHMGFVLIGIC-----------SFTNIGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIAL 369
Cdd:PRK08667 294 LKGLLAYSSIENIGIILMGIGlyvifgvygldTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVK 373
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 108773212 370 KMPKMFSMFTGFSLASLALPTMSGFVAEMMIFLGIISS-TFYSPSFRCFIILFQAL 424
Cdd:PRK08667 374 LMPYTSALFLVGAVSIAALPPFNGFASELLLYESFFQSfSVADPLIKILLFSVLAI 429
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
1-481 |
2.16e-21 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 97.98 E-value: 2.16e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 1 MNQFPWLSIIILFPLFAAFFIPLLPSRENQTVRWYTLGICLLDFLVMSYIFGYYYDFHnssfQFKESIEWIPTIGFKWAL 80
Cdd:PRK12649 1 MDSFNAIVLAIFLPFILAWTVPVLEKVLKQRIGWFAAAIAFTSFALIAQVAPEVIHGT----IITGSISWLPSAGVEFSI 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 81 GVDGLSMGLILLTGLVTTLAVLAAWPITCN----PKLFYFLMLVMYSgQIGLFTSQDLFLFFLMWELELIPIYLLISLWG 156
Cdd:PRK12649 77 YADGLAVLIGLIASGIGVIIMSYSNGYMSHkedlPRYYQYLLLFMGS-MIGMVFSGNTIQLFIFWELTSITSFMLIGYWR 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 157 GR-RRLYAATKFIFYTAIGSLFLFIA-----TFTVCFYGANIATWHFEDLAEKEYPFILEKILYLGFGfaYAVKLPIIPF 230
Cdd:PRK12649 156 HRpESVYGATKSLLITAGGGLFMFAGflllhVITGTYDIATILQDSELIENIKGHPLFLITLILIFIG--AAAKSAQGPF 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 231 HTWLPDTHGEAHYSTCMLLAGILLKMGGYGWIRINmTLFPNAHAYFapwLVILGT--VQIIYAASVCLSQKNLKRRIAYS 308
Cdd:PRK12649 234 YIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIH-PIFSGTEAWF---ILVSGTgmITMVLAGFLAFRQTDIKAILAYS 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 309 SISHMGFVLIGICSFT----NIGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIALKMPKMFSMFTGFSLA 384
Cdd:PRK12649 310 TISQLAYLMTMYGYTTyhepGLGVAAATFHLLNHATFKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALA 389
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 385 SLALPTMSGFVAEMMIFLGIIS-STFYSPSFRCFIILFQALGVILTPIYLLSMLRQMFYGVDTFHFESMSFIDsgPREVF 463
Cdd:PRK12649 390 MAGIPPLNGFLSKEMFYETSVEmGALIGGPFTIIIPAVAVLGGVFTFAYSIKLIDGIFLGERTHDHLPHHIHE--APYVM 467
|
490 500
....*....|....*....|
gi 108773212 464 IIVSLFIPVIII--GLYPNI 481
Cdd:PRK12649 468 LIPAAFLAGLVIlfGLVPSI 487
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
85-474 |
5.54e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 92.57 E-value: 5.54e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 85 LSMGLILLTGLVTTLAVLAAWPITCNPKLFYFLMLVMYSGqIGLFTSQDLFLFFLMWELELIPIYLLI-------SLWGG 157
Cdd:PRK06589 90 LLIGFLWICALLYTPKYLAINNIDSSSRFLFFFNLTILIG-VLIALSSDLFTMFVCYELLTISTAFLIghtrnniSLSGG 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 158 RRRLyaatKFIFYTAigsLFLFIATFTVCFYGANIATWHFEDLAEKEYPFILEKILYLGFGfayavKLPIIPFHTWLPdT 237
Cdd:PRK06589 169 YKYL----KILMISA---LLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIA-----KTAIFPVHSWLP-A 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 238 HGEAHYSTCMLL-AGILLKMGGYGWIRINMTLF--PNAHAYFA--PWLVILGTVQIIYAASVCLSQKNLKRRIAYSSISH 312
Cdd:PRK06589 236 AMVAHYPVSALLhAVIVVKTGLFCIYKILLYIFglSYLQRIFAefNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQ 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 313 MGFVLIGICSFTNIGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIALKMPKMFSMFTGFSLASLALPTMS 392
Cdd:PRK06589 316 LSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFS 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 393 GFVAEMMIFLGIISSTFYSPSFrcFIILFQALGVILTPIYLLSMLRQMFYgvdtFHFESMSFIDSGPrevfiIVSLFIPV 472
Cdd:PRK06589 396 GFISKFLILLAASEQNQPWLSI--IVMLVVIASSILSALYLLKILSSIYK----PSLSENSFITKSL-----PYLMQISV 464
|
..
gi 108773212 473 II 474
Cdd:PRK06589 465 IT 466
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
74-408 |
8.69e-19 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 89.56 E-value: 8.69e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 74 IGFKWA---LGVDGLSMGLILLTGLVTTLAVLAAW-----PITCNPKLFYFLMLVMYSGQIGLFTSQDLFLFFLMWELEL 145
Cdd:PRK06521 67 LGLPFLpfhLRLDALSAFFLLVISLLGAAASLYSLgyfreYEGKGPGAMGFFYNLFLASMVLVLLADDAFSFLVAWETMS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 146 IPIYLLISLW---GGRRRlyAATKFIFYTAIGSLFLFIATFTVCfygANIATWHFEDLAEKEYP-------FILekiLYL 215
Cdd:PRK06521 147 LSSWFLVIANhreAEIRR--AGFLYLLMAHAGALAILLAFGLLA---RESGSYDFAAMRAAHLSpfwaslvFLL---ALF 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 216 GFGfayaVKLPIIPFHTWLPDTHGEA--HYSTcmLLAGILLKMGGYGWIRINMTLFPNAHAYFAPWLVILGTVQ----II 289
Cdd:PRK06521 219 GFG----AKAGLVPLHVWLPRAHPAApsHVSA--LMSGVMLKVAIYGILRVVFDLLGAPGWWWGVLVLALGAISavlgVL 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 290 YAasvcLSQKNLKRRIAYSSISHMGFVLIGI-----------CSFTNIGLSGAICQMISHGLIGASLFFLAGTTYDRIRT 358
Cdd:PRK06521 293 YA----LAEHDLKRLLAYSTIENIGIIFVGLglamvfiaygmPLLAALALTAALYHLLNHALFKSLLFLGAGAVLHATGT 368
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 108773212 359 VSLSEMGGIALKMPKM-FSMFTGfSLASLALPTMSGFVAEMMIFLGIISST 408
Cdd:PRK06521 369 RDMEKLGGLIRRMPWTaWAFLIG-CLAISALPPLNGFVSEWLLLQSLLSSP 418
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
12-401 |
8.87e-19 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 89.18 E-value: 8.87e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 12 LFPLFAAFFIPLLPSRenqTVRWYTLGICLLDFLVMSYI-FGYYydfhnSSFQFkesiewiptIGFKWALG-VDGLS--M 87
Cdd:PRK12668 10 LVFIAGALLVPFLPGR---ARKALLLLAPVLAVLAVLTVpEGTY-----LTVTF---------LGFDLVLGrVDKLSrvF 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 88 GLILltGLVTTLAVLAAWPItcNPKLFYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIPIYLLISLWGGRRRLYAATKF 167
Cdd:PRK12668 73 GLIF--GIMAFIGVIYALHV--KDPGQHVAALLYVGSALGAVFAGDLLTLFVFWELMAFTSTFLVWARGTKAAVRAGFRY 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 168 IFYTAIGSLFLFIAtftVCFYGANIATWHFEDLAEKEYPFILekILYLGFGfayaVKLPIIPFHTWLPDTHGEAHYSTCM 247
Cdd:PRK12668 149 LLVHVLGGVLLLAG---ILLHYAETGSFAFGAIAGLGGTAAW--LILIGFG----VNAAFPPLHAWLPDAYPEATVTGSV 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 248 LLAGILLKMGGYGWIRinmtLFPNAHayfapWLVILGTVQIIYAASVCLSQKNLKRRIAYSSISHMGFVLIGICSFTNIG 327
Cdd:PRK12668 220 FLSAFTTKTAVYALAR----AFPGTE-----LLIYIGAAMAVYGVFFALLENDLRRLLSYHIVSQVGYMVAGIGIGTALA 290
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 108773212 328 LSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIALKMPK--MFSMFTGFSLAslALPTMSGFVAEMMIF 401
Cdd:PRK12668 291 INGAVAHAFNHILYKGLLFMSAGAVLYRTGTEKLTELGGLYRSMPLtaLFCLVGALSIS--AFPLFSGFVSKSMII 364
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
67-482 |
3.92e-18 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 87.50 E-value: 3.92e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 67 SIEWIPTIGFKWALGVDGLSMGLILLTGLVTTLAVLAAWPITCN-----PKLFYFLMLVMYSgQIGLFTSQDLFLFFLMW 141
Cdd:PRK12646 61 SIPWMKTLDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSrkdnlPRFYFYLTLFMFS-MIGIVLSDNTILMYVFW 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 142 ELELIPIYLLISLW--GGRRRLYAATKFIFyTAIGSLFL---FIATFTVCfyGANIATWHFE--DLAEKEYPFILEKILY 214
Cdd:PRK12646 140 ELTSVSSFLLISYWynNGDSQFGAIQSFMI-TVFGGLALlvgFIMLYIMT--GTNNITEILGqaDHIKNHGLFIPMIFMF 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 215 LGFGFAYAVKLpiiPFHTWLPDTHGEAHYSTCMLLAGILLKMGGYGWIRINMTL-FPNAHAYFapwLVILGTVQIIYAAS 293
Cdd:PRK12646 217 LLGAFTKSAQF---PFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLgLSNMYIYI---VTFVGLITMLFGSI 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 294 VCLSQKNLKRRIAYSSISHMGFVLI--------------GICSFTNIGLSGAICQMISHGLIGASLFFLAGTTYDRIRTV 359
Cdd:PRK12646 291 TALKQWDLKGILAYSTISQLGMIMAmvgigggyaqhqqdAIASIYVFVLFAALFHLMNHAIFKCALFMGVGIIDHEAGTR 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 360 SLSEMGGIALKMPKMFSMFTGFSLASLALPTMSGFVAEMMIFLGIISSTFYSPSFRCFIILFQALGVI---LTPIYLLSM 436
Cdd:PRK12646 371 DIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQLSQFSLISMIIIVFIGVIasiFTFTYALYM 450
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 108773212 437 LRQMFYGvdtfHFESMSFIDSGPREVF------IIVSLFIPVIIIglYPNIL 482
Cdd:PRK12646 451 VKEVFWG----KYDSKVFTKKNIHEPWlfslpsLILMVLVPVIFF--VPNIF 496
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
66-400 |
8.28e-18 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 86.64 E-value: 8.28e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 66 ESIEWIPTIG-----FKWALGVDGLSMGLILLTgLVTTLAVLAA----WPITCNPKLFYFLMLVMYSGQIGLFTSQDLFL 136
Cdd:PRK12650 56 WSVTWIPDLLgngvdVNLALRADALSLFFALLA-LVIGAVVFIYsaryLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVV 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 137 FFLMWELELIPIYLLISLWGGRRRLyAATKFIFYTAIGSLFLF--IATFTVCFYGANI-ATWHFEDLAEKEYPFILEKIL 213
Cdd:PRK12650 135 LFVAWELVSLASFFLIARSGSGGEA-GSIRTLILTFFGGLTLLaaVAIAATQTGTTSLsGILHSDVWAEKPGLTTVVAVL 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 214 YLGFGFAYAVKlpiIPFHTWLPDTHGEAHYSTCMLLAGILLKMGGYGWIRinmtlFPNAHAYFAPW---LVILGTVQIIY 290
Cdd:PRK12650 214 IAVAAFTKSAQ---FPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLR-----FSPVFHDVAVWnwlLIIVGMITALM 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 291 AASVCLSQKNLKRRIAYSSISHMGFVLIGICSFTNIGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIALK 370
Cdd:PRK12650 286 GAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRR 365
|
330 340 350
....*....|....*....|....*....|.
gi 108773212 371 MPKMFSMFTGFSLASLALPTMSGFVA-EMMI 400
Cdd:PRK12650 366 MPFTFVSVTIAALSMAAVPPLFGFVSkEGML 396
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
114-403 |
2.79e-17 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 84.26 E-value: 2.79e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 114 FYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIPIYLLISLWGGRRRLYAATKFIFYTAIGSLFLFIATFTVCFYGANIA 193
Cdd:PRK06525 115 YYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFA 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 194 TWHFEDLAEKeypfiLEKILYLGFGFAYAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGGYGWIRINMTLFPNAH 273
Cdd:PRK06525 195 LSALSGLHGS-----LKYLVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIPH 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 274 AYFApWLVILGTVQIIYAASVCLSQKNLKRRIAYSSISHMGFVLIGICSF---TNIGLSGAICQMISHGLIGASLFFLAG 350
Cdd:PRK06525 270 VIGY-VGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAG 348
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 108773212 351 TTYDRIRTVSLSEMGGIALKMPKMFSMFTGFSLASLALPTMSGFVAEMMIFLG 403
Cdd:PRK06525 349 ALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAA 401
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
5-482 |
7.77e-17 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 83.44 E-value: 7.77e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 5 PWLSIIILFPLFAAFFIPLLPSRENQT-VRWYTLGICLLDFLvmsyIFGYYYDFHNSSFQFKESIEWIPTIGFKWALGVD 83
Cdd:PRK12645 2 SLLHIAILLPFIFALLIPFLYKYFKRIhTGWFVLPVPVVLFI----YFLSLIPTTMSGNTVMKTLPWIPSLGINFTLYVD 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 84 GLSMGLILLTGLVTTLAVLAAWPITCNPKL----FYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIPIYLLISLWGGRR 159
Cdd:PRK12645 78 GLSLLFALLITGIGSLVVLYSIYYLSKKKEqlgnFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYERE 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 160 R-LYAATKFIFYTAIGSL-----FLFIATFTVCFYGANIATwHFEDLAEKEYpFILEKILYLGFGFAyavKLPIIPFHTW 233
Cdd:PRK12645 158 AsRYGAQKSMLITVFGGLsmlggFILLYIMTGSFSIREMIA-NADEIQNSPL-FIPAMILILLGAFT---KSAQFPFYIW 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 234 LPD-----THGEAH-YSTCMLLAGILLKM-------GGYGWIrinmtlfpnahayfapWLV-ILGTVQIIYAASVCLSQK 299
Cdd:PRK12645 233 LPDameapTPVSAYlHSATMVKAGIYLVArftpifaGSQVWF----------------WTVtLVGLITLFWGSLNAVKQT 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 300 NLKRRIAYSSISHMGFV--LIGICS-----------FTNIGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGG 366
Cdd:PRK12645 297 DLKGILAFSTVSQLGLImsLLGIGAaslhyqgddskIYAAAITAAIFHLINHATFKGSLFMIVGIVDHETGTRDIRKLGG 376
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 367 IALKMPKMFSMFTGFSLASLALPTMSGFVAEMMIFLGIISST---FYSPSFRCFIILFQA-LGVILTPIYLLSMLRQMFY 442
Cdd:PRK12645 377 LMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFESMLNATeanLFSLDTWGVLFPVIAwVASVFTFVYSIIFIFKTFF 456
|
490 500 510 520
....*....|....*....|....*....|....*....|....*
gi 108773212 443 GvdTFHFESMsfiDSGPREVFII-----VSLFIPVIIIGLYPNIL 482
Cdd:PRK12645 457 G--KYKPEQL---PKKAHEAPIGmlispIILASLVVVFGLFPNIL 496
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
129-421 |
1.83e-16 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 81.11 E-value: 1.83e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 129 FTSQDLFLFFLMWELELIPIYLLISLWGGR-RRLYAATKFIFYTAIGSLFLFIATFTVCFYganiatwhfedLAEKEYPF 207
Cdd:MTH00094 79 FVSSNMLMLYMFFELSMFPILIMILGYGSQiEKINSSYYLLFYAAFFSFPFLFVYLKNFFF-----------FSLCYFDF 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 208 ILEKILYLGFGFAYAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGGYGWIRInmtLFPNAHAYFAPWlVILGTVQ 287
Cdd:MTH00094 148 FLSWEMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRI---LGSLNFVYNNFW-IIFSLLG 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 288 IIYAASVCLSQKNLKRRIAYSSISHMGFVLIGICSFTNIGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGI 367
Cdd:MTH00094 224 MILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSF 303
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 108773212 368 ALKMPKMFSMFTGFSLASLALPTMSGFVAEMMIFLGIISSTFYSPSFRCFIILF 421
Cdd:MTH00094 304 FSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLV 357
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
5-485 |
3.50e-16 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 80.85 E-value: 3.50e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 5 PWLSIIILFPLFAAFFIPLLPSREnQTVRWYTL--GICLLDFLVMSYIFGYYYDFHNSSFQFKESIEWIptigfkwalgV 82
Cdd:PRK06277 2 NLLPLMVVFPMICAIIFNLLHGKD-KLIKYLTFivAILLPILPFLASYGYYYFGGHGLVNGYHSGITYL----------F 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 83 DGLSMGLILLTGLVTTLAVLAAWPITCNPKLFYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIPIYLLISLWGGRRRLY 162
Cdd:PRK06277 71 NPAKQIIIFVLSLIASLVLITGLGEKKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVIASGTEEAYK 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 163 AATKFIFYTAI-GSLFLFIATFTVCFYGA-NIATWHFEDLAEKEYPFILEKILYLGFGFAYAVKLPiiPFHTWLPDTHGE 240
Cdd:PRK06277 151 AALKYMILGNVaGSILLLGIGFLLASTGTlNITDIHNALLVNPTSPVIYGGLLLLIFGLLYGSGLP--PFHTIKSDIYAK 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 241 AH---------YS--TCMLLAGILLKMGGygwiriNMTLFPNAHAYfapwLVILGTVQIIYAASVCLSQKNLKRRIAYSS 309
Cdd:PRK06277 229 AKpfgsallqtFSkfVLVALMLVIFKLFG------GLSYFPSAQGV----LIALSVLAMVFGVVMALLQTDYKRLLAYHA 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 310 ISHMGFVLIGICSFTNIGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIALKMPKMFSMFTGFSLASLALP 389
Cdd:PRK06277 299 ISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVP 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 390 TMSGFVAEMMIFLGIISSTFYSPSFrcfiilfqaLGVILTPIYLLSMLRqMFYGV------DTFHFESMSFIDSGpreVF 463
Cdd:PRK06277 379 PFNGFQSKLMLAQAAMQANMPELAI---------IMIIVSIGTFVSMMK-AFYLIylkpkpEELEYKNKKVPKYA---VF 445
|
490 500
....*....|....*....|..
gi 108773212 464 IIVSLFIPVIIIGLYPNILLSI 485
Cdd:PRK06277 446 SLAVLTILCIILGLFPDLVTNY 467
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
114-483 |
3.25e-15 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 77.68 E-value: 3.25e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 114 FYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIPIYLLISLwgGRRRLYAATKFIFYTAIGSLFLFIATFTVCFYGANIA 193
Cdd:TIGR01770 104 FYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGL--KRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTG 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 194 TWHFEDLA-EKEYPFILEKILYLGFGF---AYAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGGYGWIRINMTLF 269
Cdd:TIGR01770 182 SLNFEDLLlFLSNGMLNISLLLLGIVLilvGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYIL 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 270 PNAHAYFAPWLVILGTVQIIYAASVCLSQKNLKRRIAYSSISHMGFVLIGICSFTNIGLSGAICQMISHGLIGASLF--F 347
Cdd:TIGR01770 262 FGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFgvL 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 348 LAGTTYDRIRTVSLSEMGGIALKMPKMFSMFTGFSLASLALPTMSGFVAEMMIFLGIISSTFYSPSFrcFIILFQALGVi 427
Cdd:TIGR01770 342 SLLRSYKDEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAV--IAVLTSVIGA- 418
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 108773212 428 ltpIYLLSMLRQMFYGVDtfhfESMSFIDSGPREVFIIVSLFIPVII-IGLYPNILL 483
Cdd:TIGR01770 419 ---FYYLRVVKVMYFDKP----ERRIPSNPQSKAQSLLLSISALFILfLGLFPSLIL 468
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
66-429 |
2.23e-14 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 75.73 E-value: 2.23e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 66 ESIEWIPTIGFKWALGVDGLSMGLILLTGLVTTLAVLAAWP-ITCNPKL--FYFLMLVMYSGQIGLFTSQDLFLFFLMWE 142
Cdd:PRK12647 46 GGYAWVPSLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGyLKGHPDLgrFYSYILLFMASMLGLVLSDNLITLFVFWE 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 143 LELIPIYLLISLWGGR---RRlyAATKFIFYTAIGSLFLfIATFTVCfygaNIATWHFEdLAE--------KEYPFILeK 211
Cdd:PRK12647 126 LTSITSFLLIGFNHEReaaRR--AALQALLVTGGGGLAL-LAGLILL----GNVTGTYS-LSEllasgdviREHPLYL-A 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 212 ILYLGFGFAYAvKLPIIPFHTWLPD-----THGEAH-YSTCMLLAGILLKMggygwiRINMTLFPNahayfAPWLVIL-- 283
Cdd:PRK12647 197 ILLLVLGGAFT-KSAQFPFHFWLPNameapTPVSAYlHSATMVKAGIYLLA------RLNPVLGGT-----PLWQTILpl 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 284 -GTVQIIYAASVCLSQKNLKRRIAYSSISHMGFV--LIGICSFTNIglSGAICQMISHGLIGASLFFLAGTTYDRIRTVS 360
Cdd:PRK12647 265 fGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLvmLLGLGSELAI--KAAVLFLVAHSLYKGALFMVAGIIDHETGTRD 342
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 108773212 361 LSEMGGIALKMPK--MFSMFTGFSLAslALPTMSGFVAEMMIFLGIISSTFYSPSFRCFIILFQALGVILT 429
Cdd:PRK12647 343 ITKLGGLRRAMPItaAAALLAALSMA--GLPPLFGFLAKELIYEALLEAPLWSLILTVAAVLGNALMVAVA 411
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
227-401 |
2.72e-14 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 75.25 E-value: 2.72e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 227 IIPFHTWLPDTHGEAHYSTCMLLAGILLKMGGYGWIRINMtLFPNAHAYFAPWLVILGTVQIIYAASVCLSQKNLKRRIA 306
Cdd:PRK08042 196 IIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSL-LGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 307 YSSISHMGFVLIGICSFTN-----------IGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIALKMPKM- 374
Cdd:PRK08042 275 YHTLENIGIILLGLGAGVTgialeqpaliaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVIs 354
|
170 180
....*....|....*....|....*..
gi 108773212 375 FSMFTGFsLASLALPTMSGFVAEMMIF 401
Cdd:PRK08042 355 IAMLVGL-MAMAALPPLNGFAGEWVIY 380
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
79-401 |
1.43e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 72.96 E-value: 1.43e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 79 ALGVDGLSMGLILLTGLVTTLAVLAA---W--------PitcnpkLFYFLMLvmysGQIGLFTSQDLFLFFLMWELELIP 147
Cdd:PRK12666 75 VLVLDRLSALMLLLTALLALAALLYAlagWdragphfhA------LFQFQLM----GLNGAFLTGDLFNLFVFFEVLLAA 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 148 IYLLISLWGGRRRLYAATKFIFYTAIGSLFLFIATFTVcfYGA----NIAtwhfeDLAEK-------EYPFILEKILYLG 216
Cdd:PRK12666 145 SYGLLLHGSGRARVRAGLHYVAINLVASSLFLIGVGLI--YGVtgtlNMA-----DLAQRiaqlpaaDRALLEAGAALLL 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 217 FgfAYAVKLPIIPFHTWLPDTHGEAHYSTCMLLAgILLKMGGYGWIRINMTLFPNA----HAYFAPWLVILGTVQIIYAA 292
Cdd:PRK12666 218 V--VFLIKAAMWPLNFWLPPAYAAASAPVAALFA-IMTKVGIYAILRLSTLLFGPEagasAGFGQDWLLPGGLATLAFGA 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 293 SVCLSQKNLKRRIAYSSISHMGFVLIGICSFTNIGLSGAICQMISHGLIGASLFFLAGTTyDRIRT------VSLSEMGG 366
Cdd:PRK12666 295 IGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLADLV-ERQRGaaadrlAVTPELYD 373
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 108773212 367 IALKMPKMFSMF---------TGFSLASLA---LPTMSGFVAEMMIF 401
Cdd:PRK12666 374 LDEEEEEEVGVAipatmallgLLFFICALAlagLPPLSGFLGKFALL 420
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
66-432 |
3.65e-13 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 72.26 E-value: 3.65e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 66 ESIEWIPTIGFKWALGVDGLSMGLILLTGLVTTLAVL--AAWPITCNPKLFYFL-MLVMYSG-QIGLFTSQDLFLFFLMW 141
Cdd:PRK12644 56 EVVPWIPSLGLDLAFRLDALAALMSLLVLGVGALVLLycARYFDDDEPRLGRFAaELVAFAGaMFGLVTSDNLLLLYVFW 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 142 ELELIPIYLLISLWGGR---RRlyAATKFIFYTAIGSLFLFIAtftVCFYGANIATWHFEDLAEK--EYPFILEKILYLg 216
Cdd:PRK12644 136 ELTTVLSFLLIGHYAERaasRR--AALQALLVTTAGGLAMLVG---IIILGQAAGTYRLSELLADppTGPAVSVAVVLI- 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 217 fgFAYAV-KLPIIPFHTWLPDT-----------HGEAhystcMLLAGILLkmggygwirinMTLFPNAHAYFAPW---LV 281
Cdd:PRK12644 210 --LVGALsKSAIVPFHFWLPGAmaaptpvsaylHAAA-----MVKAGIYL-----------VARLAPGFADVPVWrptVL 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 282 ILGTVQIIYAASVCLSQKNLKRRIAYSSISHMGF--VLIGICSfTNIGLSGaICQMISHGLIGASLFFLAGTTYDRIRTV 359
Cdd:PRK12644 272 VLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFltVLVGIGT-RDAALAG-LAMLLAHALFKAALFLVVGIIDHSTGTR 349
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 108773212 360 SLSEMGGIALKMPKMFsMFTGFSLASLA-LPTMSGFVAEMMIFLGIISSTFYSPSfRCFIILFQALGVILTPIY 432
Cdd:PRK12644 350 DIRKLSGLGRRQPVLA-VVAALAAASMAgLPPLLGFVAKEAALEAVLHDGALGPA-GPVVLAGIVLGSILTVAY 421
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
9-401 |
1.62e-12 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 69.99 E-value: 1.62e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 9 IIILFPLFAAFFIPLLPSRENQTVRWYTLGICLLDFLVMSYIFGYYYdFHNSSFQFKESIEWIPTIGFKWALGV--DGLS 86
Cdd:MTH00032 4 LVLLLPFINAFLLGFFGRLIGTIGSGILSTICMGSSTLIALFLAYEV-LINDAVVHIELYKWIESEIFITHIGLlyDTLS 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 87 MGLILLTGLVTTLAVLAAWP----------ITCNPKLFYFLMLVmysgqigLFTSQDLFLFFLMWELELIPIYLLISLWG 156
Cdd:MTH00032 83 VTMLLVISSISTLVHIYSTSymsddphvprFLCYLSLFTFLMMV-------LVTSDNYLQLFIGWEGVGVCSYLLVAFWT 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 157 GRRRL-YAATKFI----------------FYTAIGSLFLfiATFTVCFYGANIATWHFEDLAEKEYPFILEKILYLGFGF 219
Cdd:MTH00032 156 TRIQAnKAAIKAIvvnrvgdvgvilgmvlIYKTIGSLDF--LTFNGGSVGSGIMDRGYYGGGAYESPLAPFAIIGILLLI 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 220 AYAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGGYGWIRiNMTLFPNAHAYFApWLVILGTVQIIYAASVCLSQK 299
Cdd:MTH00032 234 GCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIR-SFPLFEKAPLTLL-IITIFGALTAFFAATVGLVQN 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 300 NLKRRIAYSSISHMGF--VLIGICSFTNIGLsgaiCQMISHGLIGASLFFLAGTTYDRIRT--VSLSEMGGIALKMPKMF 375
Cdd:MTH00032 312 DLKKVIAYSTCSQLGYmvLIIGIEGSHNVGL----FHLVNHAFFKALLFLSAGSVIHSTTVdeQDMRKMGGLIHSIPFTY 387
|
410 420
....*....|....*....|....*.
gi 108773212 376 SMFTGFSLASLALPTMSGFVAEMMIF 401
Cdd:MTH00032 388 TMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
7-401 |
4.69e-11 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 65.21 E-value: 4.69e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 7 LSIIILFPLFAAFFIPLLPSRENQTVRWYTLGICLLDFLVMSYIFGYYYDFHNssfqFKESIEWIPTIGFKWALGVDGLS 86
Cdd:PRK12648 3 LLLLVLLPFLGALLAALLPRNARNAEAWLAGLVALAALVLLALLYPAVAAGEV----IRAEIEWLPALGLNLSLRLDGLA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 87 M---GLILLTGLvttLAVLAAW----PITCNPKLFYFLMLVMYSgQIGLFTSQDLFLFFLMWELELIPIYLLISLWG--- 156
Cdd:PRK12648 79 WlfaLLILGIGL---LVVLYARyylsPADPVPRFFSFLLLFMGA-MLGIVLSGNLILLVVFWELTSLSSFLLIGYWHhra 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 157 -GRRRLYAAtkfIFYTAIGSLFLFIATFTVcfygANIA-TWHFED-LAEKE-------YPFILekILYLGFGFAyavKLP 226
Cdd:PRK12648 155 dARRGARMA---LTVTGAGGLALLAGVLLL----GHIVgSYDLDVvLAAGDlirahplYPPAL--VLILLGAFT---KSA 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 227 IIPFHTWLPdtHGEA---------HYSTcMLLAGILLKmggygwirinMTLFPnAHAYFAPWLVILGT---VQIIYAASV 294
Cdd:PRK12648 223 QFPFHFWLP--HAMAaptpvsaylHSAT-MVKAGVFLL----------ARLWP-VLAGTEEWFWIVGGaglITLLLGAYF 288
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 295 CLSQKNLKRRIAYSSISHMGFV--LIGICsfTNIGLSGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIALKMP 372
Cdd:PRK12648 289 ALFQHDLKGLLAYSTISHLGLItlLLGLG--SPLAAVAAIFHIINHATFKASLFMAAGIIDHETGTRDMRRLSGLRRLMP 366
|
410 420
....*....|....*....|....*....
gi 108773212 373 KMFSMFTGFSLASLALPTMSGFVAEMMIF 401
Cdd:PRK12648 367 ITATLAMVAAAAMAGVPLLNGFLSKEMFF 395
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
7-448 |
6.76e-11 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 64.41 E-value: 6.76e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 7 LSIIILFPLFAAFFIPLLPSRE-NQTVRWYTLGICLLDFLVMSYIFGYYYDFHNSSFQfKESIEWIPTIGFK--WALGVD 83
Cdd:PRK06590 5 LWLIVLLPLIGALILGLFGRRIgEKWAHLVGTGLVGLSALLSLVVFFDFLLGGGRAFS-QTLWTWISVGDFDvdFGLRVD 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 84 GLSMGLILLTGLVTTLA-VLAAWPITCNPK---------LFYFLMLVmysgqigLFTSQDLFLFFLMWELELIPIYLLIS 153
Cdd:PRK06590 84 GLSATMLVVVTGVSFLVhIYSIGYMAHDEGyrrffaylnLFTFSMLM-------LVLSDNLLQLFFGWEGVGLCSYLLIG 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 154 LWGGRRRLYAATKFIFY-TAIGSLFLFIATF-------TVCFYGANIATWHFEDLAekeyPFILEKILYLGFGFAYAvKL 225
Cdd:PRK06590 157 FWYKKPSAGAAAMKAFIvNRVGDVGLALGIFllfaefgSLNYDEVFAAAPQFFGLG----WSALTLICLLLFIGAMG-KS 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 226 PIIPFHTWLPD-----THGEA--HYSTcMLLAGILL--KMGGygwirinmtLF---PNAHAyfapWLVILGTVQIIYAAS 293
Cdd:PRK06590 232 AQFPLHTWLPDamegpTPVSAliHAAT-MVTAGVYLvaRMSP---------LFelsPEALL----FVAIVGAVTALFAAF 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 294 VCLSQKNLKRRIAYSSISHMG--FVLIGIcsftnIGLSGAICQMISHGLIGASLFFLAGT----TYDrirTVSLSEMGGI 367
Cdd:PRK06590 298 IGLVQTDIKRVLAYSTMSQLGymFLALGV-----GAYAAAIFHLMTHAFFKALLFLGAGSvihaMHH---EQDIRKMGGL 369
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 368 ALKMPKMFSMFTGFSLASLALPTMSGFVAEMmiflGIISSTFYSPSFRCFIILFqaLGVILTPIYllsMLRQMFYgvdTF 447
Cdd:PRK06590 370 RKKMPVTYATFLIGTLALIGIPPFAGFFSKD----EILEAAFANGHINLFVAGL--VGAFLTAFY---SFRLIFL---VF 437
|
.
gi 108773212 448 H 448
Cdd:PRK06590 438 H 438
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
110-411 |
4.76e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 54.97 E-value: 4.76e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 110 NPKLFYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIPIYLLISLWGGRRRLYAATKFIFYTAIGSLFLFIATFTVCFYG 189
Cdd:MTH00200 2 SPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWTS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 190 ANIATWHFEDlaekeyPFILEKILylgfgFAYAVKLPIIPFHTWLPDTHGEAHYSTCMLLaGILLKMGGYgwirinMTLF 269
Cdd:MTH00200 82 GQWGISEMLG------PLSETLIL-----LALALKLGLAPGHFWVPDVLQGLSLQTGLIL-STWQKLAPF------ALLI 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 270 PNAHAYFAPWLVILGTVQIIYAASVCLSQKNLKRRIAYSSISHMGFVLIGICSFTNIGLSGAICQMISHGLIGASLFFLA 349
Cdd:MTH00200 144 QLAPALNSNILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLN 223
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 108773212 350 GTTYDRIRTVSLSEMGGIALKMPKMFSM-----FTGFSLASLALPTMSG----FVAEMMIFLGIISSTFYS 411
Cdd:MTH00200 224 STKINSLSSSKTKNPILSMLLGLTLLSLgglppLTGFFPKWLILQELSKqglfIYATILLLGSLLSLFFYL 294
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
224-410 |
1.78e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 53.48 E-value: 1.78e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 224 KLPIIPFHTWLPDTHGEAHYSTCMLLAgILLKMGGYGwIRINMTLFPNAhayfapwLVILGTVQIIYAASVCLSQKNLKR 303
Cdd:MTH00199 203 KLSAAPFHMWAPDVYEGAPTITTALLA-TVPKIGVFS-ILVQIGPVTNV-------VLICAVLSIIYGAIGALNQTKIKR 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 304 RIAYSSISHMGFVLIGICSFTNIGLSGAICQMISHGLIGASLFFLAGTTydRIRTVSLSEMGGIALKMPKMFSMFTGFSL 383
Cdd:MTH00199 274 LLAYSGIGHMGFILFGVAIGSFESIQASLIYMIIYVIMSICSFSIILSL--KLTKGLIVEVSGLSRKNPVIALTLALTFL 351
|
170 180
....*....|....*....|....*..
gi 108773212 384 ASLALPTMSGFVAEMMIFLGIISSTFY 410
Cdd:MTH00199 352 SIAGIPPLAGFLSKWLILLSGVSSGYY 378
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
222-401 |
3.63e-07 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 52.75 E-value: 3.63e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 222 AVKLPIIPFHTWLPD------THGEAHYSTCMLLAGILLKmggygwIRINMTLFPNAHAYFAPWLVILGTVQIIYAASVC 295
Cdd:PRK02504 221 AFKISAVPFHQWTPDvyegspTPVVAFLSVGSKAAGFALA------IRLLVTAFPSFDEQWKLLFTALAILSMVLGNVVA 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 296 LSQKNLKRRIAYSSISHMGFVLIGICSFTNIGLSGAICQMISH-----GLIGASLFFLAGTTYDRIrtvslSEMGGIALK 370
Cdd:PRK02504 295 LAQTSMKRMLAYSSIGQAGFVMIGLVAGTEAGYASMVFYLLAYlfmnlGAFACVILFSLRTGTDQI-----SDYAGLYQK 369
|
170 180 190
....*....|....*....|....*....|..
gi 108773212 371 MPkMFSMFTGFSLASLA-LPTMSGFVAEMMIF 401
Cdd:PRK02504 370 DP-LLTLGLSLCLLSLGgIPPLAGFFGKIYLF 400
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
212-437 |
5.01e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 51.85 E-value: 5.01e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 212 ILYLGFGFAYAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGGYGWIRINMTLFPNAHAYFAPWLVILGTVQIIYA 291
Cdd:MTH00062 166 IVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLCCLFSVFFLITA 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 292 ASVCLSqknlKRRIAYSSISHM--GFVLIGICSFTNIGLSGAICqmISHGLIGASLFFLAGTTYDRIRT----VSLSEMG 365
Cdd:MTH00062 246 CSELDG----KRWLAFLSLSHIlvPVLGLFVGDWSSINLSFFYC--LGHGLSAGLVFLLLWCFYEVSGSrnwvLLKSGIN 319
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 108773212 366 GIALKMpkmfsMFTGFSLASLA-LPTMSGFVAEmmIFLGIISSTFYSPSFRCFIILFqaLGVILtPIYLLSML 437
Cdd:MTH00062 320 GSLVLR-----VIVVFSFLSLCsFPPTIQFFCE--VFLVSSSFGVLVYLLFWCFYLF--FGGLV-PLILLGHL 382
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
113-400 |
6.38e-07 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 52.00 E-value: 6.38e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 113 LFYFLMLVmysgqigLFTSQDLFLFFLMWELELIPIYLLISLWGGRRRL-YAATKFIFYTAIGSLFLFIATFTVCFYGAN 191
Cdd:MTH00020 119 LFTFLMVV-------LVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEAnKAAIKAMLVNRVGDIGLLLAMFLLWDRFGS 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 192 IATWHFEDLAEKEYPFILEKILYLGFgFAYAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGGYGWIRINMTLfpn 271
Cdd:MTH00020 192 LDFSSVFNMVVSAPSSDITLICLFLF-IGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLF--- 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 272 AHAYFAPWLV-ILGTVQIIYAASVCLSQKNLKRRIAYSSISHMGFVLIgICSFTNIGLSgaICQMISHGLIGASLFFLAG 350
Cdd:MTH00020 268 EQAPLALIIVtIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVV-ACGLSHYSIS--LFHLMNHAFFKALLFLSAG 344
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 108773212 351 TTydrIRTVS----LSEMGGIALKMPKMFSMFTGFSLASLALPTMSGFVAEMMI 400
Cdd:MTH00020 345 SV---IHALSdeqdMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLI 395
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
113-400 |
2.24e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 50.01 E-value: 2.24e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 113 LFYFLMLVmysgqigLFTSQDLFLFFLMWELELIPIYLLISLWGGRRRL-YAATKFIFYTAIGSLFLFIATFTVC-FYGA 190
Cdd:MTH00210 119 LFTFLMIV-------LVTSDNYVQLFIGWEGVGLCSYLLINFWLTRIKAnKAAIKAMLINRVGDIGLVLAMIMILkEFGT 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 191 ---NIATWHFEDLAEKEYPFILEKILYLGfgfayAV-KLPIIPFHTWLPD-----THGEA--HYSTcMLLAGILLkmggy 259
Cdd:MTH00210 192 lefSTISSLLVTNINKESLTIICLLLFIG-----AVgKSAQLGLHTWLPDamegpTPVSAliHAAT-MVTAGVFL----- 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 260 gwIRINMTLFpnAHAYFAPWLV-ILGTVQIIYAASVCLSQKNLKRRIAYSSISHMGFVLIgICSFTNigLSGAICQMISH 338
Cdd:MTH00210 261 --IIRSGPLF--EGSPLALTIVtILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVM-VCGISN--YSTSLFHLMNH 333
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 108773212 339 GLIGASLFFLAGTTydrIRTVS----LSEMGGIALKMPKMFSMFTGFSLASLALPTMSGFVAEMMI 400
Cdd:MTH00210 334 AFFKALLFLSAGSV---IHAVSdeqdMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLI 396
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
114-394 |
2.61e-06 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 49.91 E-value: 2.61e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 114 FYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIPIYLLISLWGGRRRLYAATKFIFYTA-IGSLFLFIATFTVCFYGAni 192
Cdd:PRK07390 122 FFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAARDAFLTKrVGDLLLLMGVVALSPLAG-- 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 193 aTWHFEDLAE----KEYPFILEKILYLGFGFAYAVKLPIIPFHTWLpDTHGEAHYSTCMLLAGILLKMGGYGWIRIN--M 266
Cdd:PRK07390 200 -TLNFSDLAAwaatANLDPLTATLLGLALIAGPTGKCAQFPLHLWL-DEAMEGPNPASILRNSVVVATGAWVLIKLQpvL 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 267 TLFPNAHAYfapwLVILGTVQIIYAASVCLSQKNLKRRIAYSSISHMGFVLIGicsftnIGL---SGAICQMISHGLIGA 343
Cdd:PRK07390 278 ALSPVALTV----LIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIA------VGLqqpDIALLLLLTHAIAKA 347
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 108773212 344 SLFFLAGTTYDRIRTVSLSEMGGIALKMPKMFSMFTGFSLASLALPTMSGF 394
Cdd:PRK07390 348 LLFMSVGSIILTTITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGF 398
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
90-493 |
3.81e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 49.40 E-value: 3.81e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 90 ILLTGLVTTLAVLAAWPITCNPKLFYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIPIYLLISLWggRRRLYAATKFIF 169
Cdd:PRK06459 50 SIISTIVWILASLYSIEYDHYGKWLSSLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALT--KKNKRPAFVFMA 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 170 YTAIgSLFLFIATFTVCFYGANIATWHFedlAEKEYPFILekilyLGFGFAyaVKLPIIPFH--TWLPDTHGEAHYSTCM 247
Cdd:PRK06459 128 FGEL-STVLILAGFAWAFIISGTTNFSY---LPSPVPLIL-----ASFGFI--IKMGMMPFLvsEWLPIAHGNAPSNFSA 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 248 LLAGILLKMGGYGWIRINMTLFPNAHAYFAPWLVILGTVQIIYAASVCLSQKNLKRRIAYSSISHMGFVLI--------- 318
Cdd:PRK06459 197 ILSATMTLMGVYGILKMTILTQTIPIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILValglymvtk 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 319 -GICSFTNIGLSGAICQMISHGLIGASLFFLAGTTydriRTVSLSEMGGIALKMPKMFSMFTGFSLASLaLPTMsGFVAE 397
Cdd:PRK06459 277 qLITSIEHFSLITVILYSFAHSVAKTGLFLSSGLQ----EKQSITYSKKIRNRWIELGLTLLASSLSGL-LPNI-GGVAS 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 398 MMIFLGIISSTFYSPSFrcFIILFQALGVILTPIYLLSMLRQMFYGVDTFHFESMSFIDSGPREVFIIVSLFIpVIIIGL 477
Cdd:PRK06459 351 WLLLESLFMFAYVLHNV--ISILFIVTGAIIAMGEGLATALLIKYITYTSLFRNTKEQLSKIKKYPILLSALI-VLILGF 427
|
410
....*....|....*.
gi 108773212 478 YPNILLSIWQNALSIL 493
Cdd:PRK06459 428 TLPYLISPFKTSTTIL 443
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-349 |
6.36e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 48.62 E-value: 6.36e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 2 NQFPWLSIiiLFPLFAAFFIPLLpsRENQTVRWYTLgICLLDFLVMSYifgYYYDFHNSSFQFKESIEWIPTIGFKWALg 81
Cdd:PRK06591 5 NHFPIIQI--LFPLFGALLIISF--RFIEFARIITR-ICILSSLLVSI---YGYSIIQNTELSYTMGGWTSKIGIEYRL- 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 82 vDGLSMGLILLTGLVTTLAVLAAWPIT-------CNPK---LFYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIPIYLL 151
Cdd:PRK06591 76 -NSLNQAIIVYLNLVLLFFLVFCHKITnqtilkyINNNrksLFYGILLFAHTGYLGMIATNDFFNLYVFIEISALSSYVL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 152 ISLWGGRRRLYAATKFIFYTAIGSLFLFIAtftVCFYGANIATWHFEDLAEKEYPFILEKILYLGFGF---AYAVKLPII 228
Cdd:PRK06591 155 IASGNNPKSLIGAFDYLIMGSIGATLILIA---IGFLLSITGSLNMTDIAAYLQEHTNSRIITIAIGFfliGAILKTAFF 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 229 PFHTWLPDTHGEAHYSTCMLLAGILLKMGGY-----GWIRINMTLFPNAHAYFAPWLVILGtvqIIYAASVCLSQKNLKR 303
Cdd:PRK06591 232 PMHFWMMRAYNNTASVILVYLAGISTIIGIYiiykfTYIIIGYETIKTAITNFIRPIALAT---LIIAPYFAYQAKNFKN 308
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 108773212 304 RIAYSSISHMGFVLigICSFTNIGLSGAICQMISHGLIGASLFFLA 349
Cdd:PRK06591 309 IIIYSCFTQIGYVF--LLYVTENGIIILPSLLLADSINKIALFLID 352
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
113-447 |
1.03e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 48.02 E-value: 1.03e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 113 LFYFLMLVmysgqigLFTSQDLFLFFLMWELELIPIYLLISLWGGRRRL-YAATKFIFYTAIGSLFLFIATFTVCFygaN 191
Cdd:MTH00211 118 LFLIFMLI-------LVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDAnTAALQAVIYNRIGDIGLLLSMVWLLL---N 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 192 IATWHFEDLaekeypFILEK---ILYLGFGFAYAVKLPIIPFHTWLPDTHgEA--------HYSTcMLLAGILLkmggyg 260
Cdd:MTH00211 188 LNSWEISQL------FILNLdltLFLLGLLLAAMGKSAQFGFHPWLPSAM-EGptpvsallHSST-MVVAGVFL------ 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 261 WIRINmTLFPNaHAYFAPWLVILGTVQIIYAASVCLSQKNLKRRIAYSSISHMGFVligicsFTNIGLSG---AICQMIS 337
Cdd:MTH00211 254 LIRLS-PLFQN-NQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLM------MVTLGLNQpqlAFLHICT 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 338 HGLIGASLFFLAGTTydrIRTVS----LSEMGGIALKMPKMFSMFTGFSLASLALPTMSGFVAEMMIFlgiisSTFYSPS 413
Cdd:MTH00211 326 HAFFKAMLFMCSGSI---IHGLNneqdIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLIL-----ESMNGSY 397
|
330 340 350
....*....|....*....|....*....|....
gi 108773212 414 FRCFIILFQALGVILTPIYLLSMLRQMFYGVDTF 447
Cdd:MTH00211 398 LNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRF 431
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
216-401 |
1.21e-05 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 47.69 E-value: 1.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 216 GFGFayavKLPIIPFHTWLPD------THGEAHYSTCMLLAGILLKmggygwIRINMTLFPNAHAYFAPWLVILGTVQII 289
Cdd:CHL00049 223 GIGF----KLSLAPFHQWTPDvyegspTPVVAFLSVTSKVAASALA------TRIFDIPFYFSSNEWHLLLEILAILSMI 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 290 YAASVCLSQKNLKRRIAYSSISHMGFVLIG-ICSFTNIGLSGAICQMISH-----GLIGASLFFLAGTTYDRIRtvslsE 363
Cdd:CHL00049 293 LGNLIAITQTSMKRMLAYSSIGQIGYVIIGiIVGDSNDGYASMITYMLFYifmnlGTFACIVLFGLRTGTDNIR-----D 367
|
170 180 190
....*....|....*....|....*....|....*...
gi 108773212 364 MGGIALKMPKMFSMFTGFSLASLALPTMSGFVAEMMIF 401
Cdd:CHL00049 368 YAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGKLYLF 405
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
110-320 |
1.25e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 47.66 E-value: 1.25e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 110 NPKLFYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIPIYLLISLWGGRRRL-YAATKFIFYTAIGSLFlFIATFTVCFY 188
Cdd:MTH00208 136 NKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDAnSSALQAVIYNRIGDIG-IILFLSLSLI 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 189 GANiaTWH-FEDLAEKEYPFILEKILYLGFGFAYAVKLPIIPFHTWLPD-----THGEA--HYSTcMLLAGILLkmggyg 260
Cdd:MTH00208 215 NFN--SWNlNEILSLNNSNSFLINILLFGILLAAAGKSAQFGLHPWLPAamegpTPVSAllHSST-MVVAGVFL------ 285
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 108773212 261 wiRINMTLFPNAHAYFAPWLVILGTVQIIYAASVCLSQKNLKRRIAYSSISHMGF--VLIGI 320
Cdd:MTH00208 286 --LIRTSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLmvVAIGL 345
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
3-394 |
1.43e-05 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 47.71 E-value: 1.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 3 QFPWLsiIILFPLFAAFFIPLLPSRENQTVRWYTLGICLLDFLVMSYIFGYYYDFHNSSFQFKESIEWIptigFKWA-LG 81
Cdd:PRK07376 6 QYAWL--IPVLPLLGAVLVGLGLISFNQTTNRLRQPVAVLLISLVGAAAVLSYALLWSQIQGHEPYERL----FEWAsAG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 82 VDGLSMGLI------LLTGLVTTLAVLAAwpITCNPKL--------FYFLMLVMYSGQIGLFTSQDLFLFFLMWELELIP 147
Cdd:PRK07376 80 DFHLPMGYVidplgaVMLVLVTTVALLVM--IYSDGYMahdpgyvrFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMC 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 148 IYLLISLWGGRRRLYAATKFIFYT--------AIGSLFLFIATFTVCFYGanIATWHFEDLAEKEYPFILEKILYLGFGF 219
Cdd:PRK07376 158 SYLLVGFWYDRKGAADAAQKAFVVnrvgdfglLLGILGLFWATGSFDFDG--IADRLSELVSSGAVSGWLALLLCILVFL 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 220 AYAVKLPIIPFHTWLPD-----THGEA--HYSTcMLLAGILLKMGGYGWirinMTLFPNAHAYFApwlvILGTVQIIYAA 292
Cdd:PRK07376 236 GPMAKSAQFPLHVWLPDamegpTPISAliHAAT-MVAAGVFLVARMYPV----FEQFPAVMTVIA----WTGAITAFLGA 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 293 SVCLSQKNLKRRIAYSSISHMGFVLIGIcsftNIGLSGA-ICQMISHGLIGASLFFLAGTT---------YDRIRTVSLS 362
Cdd:PRK07376 307 SIALTQNDIKKGLAYSTISQLGYMVMAM----GCGAYSAgLFHLMTHAYFKAMLFLGSGSVihgmeevvgHDPVLAQDMR 382
|
410 420 430
....*....|....*....|....*....|..
gi 108773212 363 EMGGIALKMPKMFSMFTGFSLASLALPTMSGF 394
Cdd:PRK07376 383 LMGGLRKYMPITAITFLIGCLAISGIPPFAGF 414
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
224-320 |
3.36e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 46.18 E-value: 3.36e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 224 KLPIIPFHTWLPDTHGEAHYSTCMLLAgILLKMGGYGwirINMTLFPNAHAyfapwLVILGTVQIIYAASVCLSQKNLKR 303
Cdd:MTH00196 108 KLSVAPFHMWAPDVYEGAPTKTTALLA-IVPKLGIFS---ILVSIGLNVNI-----LLIGGLFSLFVGAIGALNQTKIKR 178
|
90
....*....|....*..
gi 108773212 304 RIAYSSISHMGFVLIGI 320
Cdd:MTH00196 179 LLAYSGIGHMGFVLWGI 195
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
228-437 |
1.98e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 43.99 E-value: 1.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 228 IPFHTWLPDTHGE-------AHYSTcMLLAGILLKMGGYGwirinmtlFPNAHAYFAPWLVILGTVQIIYAASVCLSQKN 300
Cdd:MTH00207 196 MPFSSWLPAAMAAptpvsalVHSST-LVTAGVFLLIRFYP--------FLSSTYWFNPALLLTASLTMLMAGLSAMTECD 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 301 LKRRIAYSSISHMGFVLigicsfTNIGLSG---AICQMISHGLIGASLFFLAGT-TYDRIRTVSLSEMGGIALKMPKMFS 376
Cdd:MTH00207 267 MKKIIALSTLSQLGVMM------ASLGLGMpklALFHLITHALFKALLFVCAGSlIHSHHHSQDLRTMGNLTNQMPLTTS 340
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 108773212 377 MFTGFSLASLALPTMSGFVAEMMIflgIISSTFYSPSFrcFIILFQALGVILTPIYLLSML 437
Cdd:MTH00207 341 CLLIANLALCGSPFLSGFYSKDLI---LESSLFYPHNS--LMILMIFLATALTAAYSTRFT 396
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
214-338 |
2.16e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 43.69 E-value: 2.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 214 YLGFGFAYAVKLPIIPFHTWLPDTHGEAHYSTCMLLAgILLKMGGYgwirinmtLFPNAHAYFAPWLVILGTVQIIYAAS 293
Cdd:MTH00198 302 YLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIA-IIPKFTVY--------ILLTSLVITSKLLLSVAIISLVVGAF 372
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 108773212 294 VCLSQKNLKRRIAYSSISHMGFVLIGICSFTNIGLSGAICQMISH 338
Cdd:MTH00198 373 GALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTY 417
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
213-436 |
5.29e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 42.18 E-value: 5.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 213 LYLGFGFAYAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGI-------LLKMGGYGWIRINMtlfpnahayfapwLVILGT 285
Cdd:MTH00144 86 SMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWqkvaplfLLSNFLDLYWLAYL-------------LCVISV 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 286 VQIIYAASVCLSQKNLKRRIAYSSISHMGFVLIGICsftnIGLSGAICQMISHGLIGASLFFLAGTTydriRTVSLSEMG 365
Cdd:MTH00144 153 LSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAIL----HGSWLMWMYFLIYIVSSGFLFFSLWSG----DSGSMKDLG 224
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 108773212 366 GiaLKMPKMFSMFTGFSLASLA-LPTMSGFVAEMMIFLGIISSTFYspsfrcFIILFQALGVILTPIYLLSM 436
Cdd:MTH00144 225 S--LKPSYKTGLSIISLLLSLGgLPPFLGFCSKLLVLISSMESSPL------LLILLLLLGSLISLFFYLSV 288
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
220-405 |
1.15e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 41.06 E-value: 1.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 220 AYAVKLPIIPFHTWLPDTHGEAHYSTCMLLAgillkmggyGWIRIN-MTLFPNAHAYFAP-WLVILGTVQIIYAASVCLS 297
Cdd:MTH00070 101 ALMMKLGIAPFHFWLPEVLQGLDLTTGLILS---------TWQKLApMALLIQISHLLNSnLLIIMGLLSTLIGGWGGLN 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 298 QKNLKRRIAYSSISHMGFVLIGICSFTNIGLSGAICQMIshglIGASLFFlagtTYDRIRTVSLSEMGGIALKMPKMFSM 377
Cdd:MTH00070 172 QTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLI----MTSSMFL----MLMNLNSTNINKLSSSWSKNPTLTSM 243
|
170 180
....*....|....*....|....*....
gi 108773212 378 FTgFSLASLA-LPTMSGFVAEMMIFLGII 405
Cdd:MTH00070 244 MM-LTLLSLGgLPPTTGFIPKWLILQELT 271
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
219-486 |
3.95e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 39.68 E-value: 3.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 219 FAYAVKLPIIPFHTWLPDTHgEAHYSTCMLLAGILLKMGGYGWIRINMTLfpnAHAYFAPW-LVILGTVQIIYAASVCLS 297
Cdd:PRK08168 208 LAVILKTAQLPVHGWLIQVM-EAPTPVSALLHAGVVNLGGFVLIRFAPLL---EQAPPARWlLVLVGLATAVLAGLVMLT 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 298 QKNLKRRIAYSSISHMGFVLIGIcsftNIGL-SGAICQMISHGLIGASLFFLAGTTYDRIRTVSLSEMGGIALKMPKMFS 376
Cdd:PRK08168 284 RISIKVRLAWSTVAQMGFMLLEC----GLGLyELALLHLVAHSLYKAHAFLSASEAVRDTRLRRLQGPQSAAGVVSLLLA 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108773212 377 MftGFSLASLALPTMSGF---------VAEMMIFLGIISSTFYSPSFRCFIILFQALGVI-LTPIYLLsmLRQMFYGVDT 446
Cdd:PRK08168 360 P--LLSAALVLLLQSLLPlgawpwwwsAVLALAWAPLLWQPCASGASTLSGLGLGLLLVAgLTALAFL--AHLLPLGLAD 435
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 108773212 447 FHFESMSFIDSgprevFIIVSLFIPVIIIGLYPNILLSIW 486
Cdd:PRK08168 436 APGPALGLAAL-----AGMAALYLLQALLQRRPQHRLSRW 470
|
|
| |
