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Conserved domains on  [gi|121622406|ref|YP_980217|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Furcifer oustaleti]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009570)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 7-321 0e+00

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 214422  Cd Length: 323  Bit Score: 511.75  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406   7 MIFKTSNLLTMFISILIAVAFLTLMERKILSYMQLRKGPNIVGPQGILQPIMDGVKLLTKEPVRPKQASPIMFTAAPTLA 86
Cdd:MTH00111   4 LLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILA 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406  87 LSLSMFMWTPMPIPNPIITINLGLLLLMAVSSMGVYSILWSGWASNSKYALIGALRAIAQMISYEVTLGLILMCLTIQTG 166
Cdd:MTH00111  84 LLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSG 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406 167 NYNLETFSFTQEQTWLITTTWPMTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGMFALLFLAEYSNIILMNTLT 246
Cdd:MTH00111 164 GYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLT 243

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 121622406 247 CTLFLNSGNIQ--SNMFTTLMMMKTMLLTMGFLWTRASYPRFRYDQLMQLLWKQFLPLTLALCLLHTTMPLALTALP 321
Cdd:MTH00111 244 TILFLNPSTLNlpPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLP 320
 
Name Accession Description Interval E-value
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 7-321 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 511.75  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406   7 MIFKTSNLLTMFISILIAVAFLTLMERKILSYMQLRKGPNIVGPQGILQPIMDGVKLLTKEPVRPKQASPIMFTAAPTLA 86
Cdd:MTH00111   4 LLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILA 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406  87 LSLSMFMWTPMPIPNPIITINLGLLLLMAVSSMGVYSILWSGWASNSKYALIGALRAIAQMISYEVTLGLILMCLTIQTG 166
Cdd:MTH00111  84 LLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSG 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406 167 NYNLETFSFTQEQTWLITTTWPMTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGMFALLFLAEYSNIILMNTLT 246
Cdd:MTH00111 164 GYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLT 243

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 121622406 247 CTLFLNSGNIQ--SNMFTTLMMMKTMLLTMGFLWTRASYPRFRYDQLMQLLWKQFLPLTLALCLLHTTMPLALTALP 321
Cdd:MTH00111 244 TILFLNPSTLNlpPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLP 320
NADHdh pfam00146
NADH dehydrogenase;
14-299 3.07e-109

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 319.80  E-value: 3.07e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406   14 LLTMFISILIAVAFLTLMERKILSYMQLRKGPNIVGPQGILQPIMDGVKLLTKEPVRPKQASPIMFTAAPTLALSLSMFM 93
Cdd:pfam00146   2 ILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406   94 WTPMPI-PNPIIT-INLGLLLLMAVSSMGVYSILWSGWASNSKYALIGALRAIAQMISYEVTLGLILMCLTIQTGNYNLE 171
Cdd:pfam00146  82 FAVIPFgPGLVLAdLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406  172 TFSFTQEQTWLITTTWPMTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGMFALLFLAEYSNIILMNTLTCTLFL 251
Cdd:pfam00146 162 EIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFL 241

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 121622406  252 NSGNIQSNMFTTLMMMK-TMLLTMGFLWTRASYPRFRYDQLMQLLWKQF 299
Cdd:pfam00146 242 GGWLGPFPLPGLLWFLLkVFFVFFLFIWIRATLPRFRYDQLMRLGWKVL 290
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 5-297 2.86e-98

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 292.80  E-value: 2.86e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406   5 FYMIFKtsnLLTMFISILIAVAFLTLMERKILSYMQLRKGPNIVGPQGILQPIMDGVKLLTKEPVRPKQASPIMFTAAPT 84
Cdd:COG1005    9 LITLIK---ALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPI 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406  85 LALSLSMFMWTPMPI-PNPIIT-INLGLLLLMAVSSMGVYSILWSGWASNSKYALIGALRAIAQMISYEVTLGLILMCLT 162
Cdd:COG1005   86 LAFIPALLAFAVIPFgPGLVLAdLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVV 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406 163 IQTGNYNLETFSFTQEQT-WLITTTWPMTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGMFALLFLAEYSNIIL 241
Cdd:COG1005  166 LLAGSLNLSEIVEAQAGGlWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFL 245

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 121622406 242 MNTLTCTLFLNSGNIQSNMFTTLMMMKT-------MLLTMGFLWTRASYPRFRYDQLMQLLWK 297
Cdd:COG1005  246 VSALATTLFLGGWLGPFPILPLGGLPGIlwfllktLFFIFFFIWVRATLPRYRYDQLMRLGWK 308
 
Name Accession Description Interval E-value
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 7-321 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 511.75  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406   7 MIFKTSNLLTMFISILIAVAFLTLMERKILSYMQLRKGPNIVGPQGILQPIMDGVKLLTKEPVRPKQASPIMFTAAPTLA 86
Cdd:MTH00111   4 LLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILA 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406  87 LSLSMFMWTPMPIPNPIITINLGLLLLMAVSSMGVYSILWSGWASNSKYALIGALRAIAQMISYEVTLGLILMCLTIQTG 166
Cdd:MTH00111  84 LLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSG 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406 167 NYNLETFSFTQEQTWLITTTWPMTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGMFALLFLAEYSNIILMNTLT 246
Cdd:MTH00111 164 GYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLT 243

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 121622406 247 CTLFLNSGNIQ--SNMFTTLMMMKTMLLTMGFLWTRASYPRFRYDQLMQLLWKQFLPLTLALCLLHTTMPLALTALP 321
Cdd:MTH00111 244 TILFLNPSTLNlpPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLP 320
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 13-321 6.95e-158

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 444.05  E-value: 6.95e-158
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406  13 NLLTMFISILIAVAFLTLMERKILSYMQLRKGPNIVGPQGILQPIMDGVKLLTKEPVRPKQASPIMFTAAPTLALSLSMF 92
Cdd:MTH00134  11 NPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLALT 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406  93 MWTPMPIPNPIITINLGLLLLMAVSSMGVYSILWSGWASNSKYALIGALRAIAQMISYEVTLGLILMCLTIQTGNYNLET 172
Cdd:MTH00134  91 LWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQT 170

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406 173 FSFTQEQTWLITTTWPMTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGMFALLFLAEYSNIILMNTLTCTLFLN 252
Cdd:MTH00134 171 FNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILFLG 250

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 121622406 253 SGNIQS--NMFTTLMMMKTMLLTMGFLWTRASYPRFRYDQLMQLLWKQFLPLTLALCLLHTTMPLALTALP 321
Cdd:MTH00134 251 ASHIPTlpELTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGLP 321
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 6-321 1.93e-156

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 440.21  E-value: 1.93e-156
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406   6 YMIFKTSNLLTMFISILIAVAFLTLMERKILSYMQLRKGPNIVGPQGILQPIMDGVKLLTKEPVRPKQASPIMFTAAPTL 85
Cdd:MTH00071   3 TLISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTM 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406  86 ALSLSMFMWTPMPIPNPIITINLGLLLLMAVSSMGVYSILWSGWASNSKYALIGALRAIAQMISYEVTLGLILMCLTIQT 165
Cdd:MTH00071  83 ALTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLT 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406 166 GNYNLETFSFTQEQTWLITTTWPMTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGMFALLFLAEYSNIILMNTL 245
Cdd:MTH00071 163 GGFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTL 242

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 121622406 246 TCTLFLNSGN--IQSNMFTTLMMMKTMLLTMGFLWTRASYPRFRYDQLMQLLWKQFLPLTLALCLLHTTMPLALTALP 321
Cdd:MTH00071 243 STILFLGSTYnhLQPELSTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGIP 320
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 13-321 1.19e-147

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 417.87  E-value: 1.19e-147
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406  13 NLLTMFISILIAVAFLTLMERKILSYMQLRKGPNIVGPQGILQPIMDGVKLLTKEPVRPKQASPIMFTAAPTLALSLSMF 92
Cdd:MTH00104   5 NILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLALT 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406  93 MWTPMPIPNPIITINLGLLLLMAVSSMGVYSILWSGWASNSKYALIGALRAIAQMISYEVTLGLILMCLTIQTGNYNLET 172
Cdd:MTH00104  85 MWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLST 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406 173 FSFTQEQTWLITTTWPMTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGMFALLFLAEYSNIILMNTLTCTLFLN 252
Cdd:MTH00104 165 LITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILFLG 244

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 121622406 253 SGNIQSN--MFTTLMMMKTMLLTMGFLWTRASYPRFRYDQLMQLLWKQFLPLTLALCLLHTTMPLALTALP 321
Cdd:MTH00104 245 AFHNPYMpeLYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIP 315
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 7-321 4.22e-139

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 395.82  E-value: 4.22e-139
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406   7 MIFKTSNLLTMFISILIAVAFLTLMERKILSYMQLRKGPNIVGPQGILQPIMDGVKLLTKEPVRPKQASPIMFTAAPTLA 86
Cdd:MTH00218   1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406  87 LSLSMFMWTPMPIPNPIITINLGLLLLMAVSSMGVYSILWSGWASNSKYALIGALRAIAQMISYEVTLGLILMCLTIQTG 166
Cdd:MTH00218  81 LTLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406 167 NYNLETFSFTQEQTWLITTTWPMTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGMFALLFLAEYSNIILMNTLT 246
Cdd:MTH00218 161 GFSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLS 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 121622406 247 CTLFLNSGNIQSNmfttlMMMKTMLLTMGFLWTRASYPRFRYDQLMQLLWKQFLPLTLALCLLHTTMPLALTALP 321
Cdd:MTH00218 241 VILFLGTSLTTIN-----LMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASLP 310
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 6-299 1.78e-130

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 374.31  E-value: 1.78e-130
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406   6 YMIFKTSNLLTMFISILIAVAFLTLMERKILSYMQLRKGPNIVGPQGILQPIMDGVKLLTKEPVRPKQASPIMFTAAPTL 85
Cdd:MTH00040   2 SVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406  86 ALSLSMFMWTPMPIPNPIITINLGLLLLMAVSSMGVYSILWSGWASNSKYALIGALRAIAQMISYEVTLGLILMCLTIQT 165
Cdd:MTH00040  82 FLFLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFS 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406 166 GNYNLETFSFTQEQTWLITTTWPMTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGMFALLFLAEYSNIILMNTL 245
Cdd:MTH00040 162 GSFSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLL 241

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 121622406 246 TCTLFLNSGNIQSNMFTTLMMMK---TMLLTMGFLWTRASYPRFRYDQLMQLLWKQF 299
Cdd:MTH00040 242 SVILFLGGGSPFNEIFPINIIIVgikTTFLVFLFLWVRASYPRFRYDQLMFLTWKNY 298
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 18-299 7.19e-116

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 336.84  E-value: 7.19e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406  18 FISILIAVAFLTLMERKILSYMQLRKGPNIVGPQGILQPIMDGVKLLTKEPVRPKQASPIMFTAAPTLALSLSMFMWTPM 97
Cdd:MTH00143  11 YLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLY 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406  98 PIPNPIITINLGLLLLMAVSSMGVYSILWSGWASNSKYALIGALRAIAQMISYEVTLGLILMCLTIQTGNYNLETFSFTQ 177
Cdd:MTH00143  91 PSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFIEISESQ 170

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406 178 EQTWLITTTWPMTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGMFALLFLAEYSNIILMNTLTCTLFLNSGNIQ 257
Cdd:MTH00143 171 FSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFFGGSSVL 250

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|..
gi 121622406 258 SNMFTTLMMMKTMLLTMGFLWTRASYPRFRYDQLMQLLWKQF 299
Cdd:MTH00143 251 FLLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSF 292
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 7-299 3.64e-110

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 322.46  E-value: 3.64e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406   7 MIFKTSNLLTMfISILIAVAFLTLMERKILSYMQLRKGPNIVGPQGILQPIMDGVKLLTKEPVRPKQASPIMFTAAPTLA 86
Cdd:MTH00195   2 MISVIHFLIQI-VPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406  87 LSLSMFMWTPMPIPNPIITINLGLLLLMAVSSMGVYSILWSGWASNSKYALIGALRAIAQMISYEVTLGLILMCLTIQTG 166
Cdd:MTH00195  81 LALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406 167 NYNLETFSFTQEQTWLITTTWPMTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGMFALLFLAEYSNIILMNTLT 246
Cdd:MTH00195 161 SFDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLT 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 121622406 247 CTLFLNSGNIqsnmftTLMMMKTMLLTMGFLWTRASYPRFRYDQLMQLLWKQF 299
Cdd:MTH00195 241 TILFLGGGGT------IIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCY 287
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 7-299 8.49e-110

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 321.33  E-value: 8.49e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406   7 MIFKTSNLLTMFISILIAVAFLTLMERKILSYMQLRKGPNIVGPQGILQPIMDGVKLLTKEPVRPKQASPIMFTAAPTLA 86
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406  87 LSLSMFMWTPMPIPNPIITINLGLLLLMAVSSMGVYSILWSGWASNSKYALIGALRAIAQMISYEVTLGLILMCLTIQTG 166
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406 167 NYNLETFSFTQEQTWLITTTWPMTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGMFALLFLAEYSNIILMNTLT 246
Cdd:MTH00193 161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 121622406 247 CTLFLNsgniqSNMFTTLMMMKTMLLTMGFLWTRASYPRFRYDQLMQLLWKQF 299
Cdd:MTH00193 241 VLMFLG-----GDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSF 288
NADHdh pfam00146
NADH dehydrogenase;
14-299 3.07e-109

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 319.80  E-value: 3.07e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406   14 LLTMFISILIAVAFLTLMERKILSYMQLRKGPNIVGPQGILQPIMDGVKLLTKEPVRPKQASPIMFTAAPTLALSLSMFM 93
Cdd:pfam00146   2 ILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406   94 WTPMPI-PNPIIT-INLGLLLLMAVSSMGVYSILWSGWASNSKYALIGALRAIAQMISYEVTLGLILMCLTIQTGNYNLE 171
Cdd:pfam00146  82 FAVIPFgPGLVLAdLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406  172 TFSFTQEQTWLITTTWPMTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGMFALLFLAEYSNIILMNTLTCTLFL 251
Cdd:pfam00146 162 EIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFL 241

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 121622406  252 NSGNIQSNMFTTLMMMK-TMLLTMGFLWTRASYPRFRYDQLMQLLWKQF 299
Cdd:pfam00146 242 GGWLGPFPLPGLLWFLLkVFFVFFLFIWIRATLPRFRYDQLMRLGWKVL 290
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 8-299 3.94e-103

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 304.27  E-value: 3.94e-103
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406   8 IFKTSNLLTMFISILIAVAFLTLMERKILSYMQLRKGPNIVGPQGILQPIMDGVKLLTKEPVRPKQASPIMFTAAPTLAL 87
Cdd:MTH00225   1 MSFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406  88 SLSMFMWTPMPIPNPIITINLGLLLLMAVSSMGVYSILWSGWASNSKYALIGALRAIAQMISYEVTLGLILMCLTIQTGN 167
Cdd:MTH00225  81 ILSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLT 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406 168 YNLETFSFTQEQTWLITTTWPMTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGMFALLFLAEYSNIILMNTLTC 247
Cdd:MTH00225 161 YNLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTS 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 121622406 248 TLFLNSGniqSNMFTTLMMMKTMLLTMGFLWTRASYPRFRYDQLMQLLWKQF 299
Cdd:MTH00225 241 ILFFGGF---FVTIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSF 289
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 14-299 2.53e-98

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 292.79  E-value: 2.53e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406  14 LLTMFISILIAVAFLTLMERKILSYMQLRKGPNIVGPQGILQPIMDGVKLLTKEPVRPKQASPIMFTAAPTLALSLSMFM 93
Cdd:MTH00054   8 ILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIA 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406  94 WTPMPIPNPII--TINLGLLLLMAVSSMGVYSILWSGWASNSKYALIGALRAIAQMISYEVTLGLILMCLTIQTGNYNLE 171
Cdd:MTH00054  88 WGVIPYGEGVVlsDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLT 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406 172 TFSFTQEQTWLITTTWPMTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGMFALLFLAEYSNIILMNTLTCTLFL 251
Cdd:MTH00054 168 EIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVILFL 247

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 121622406 252 NSGNIQSNMFTTLMMMKTMLLTMG-----FLWTRASYPRFRYDQLMQLLWKQF 299
Cdd:MTH00054 248 GGWLVISGPTSYFSNFVWFGIKIAliiflFIWIRASYPRIRYDQLMALLWKSY 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 5-297 2.86e-98

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 292.80  E-value: 2.86e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406   5 FYMIFKtsnLLTMFISILIAVAFLTLMERKILSYMQLRKGPNIVGPQGILQPIMDGVKLLTKEPVRPKQASPIMFTAAPT 84
Cdd:COG1005    9 LITLIK---ALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPI 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406  85 LALSLSMFMWTPMPI-PNPIIT-INLGLLLLMAVSSMGVYSILWSGWASNSKYALIGALRAIAQMISYEVTLGLILMCLT 162
Cdd:COG1005   86 LAFIPALLAFAVIPFgPGLVLAdLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVV 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406 163 IQTGNYNLETFSFTQEQT-WLITTTWPMTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGMFALLFLAEYSNIIL 241
Cdd:COG1005  166 LLAGSLNLSEIVEAQAGGlWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFL 245

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 121622406 242 MNTLTCTLFLNSGNIQSNMFTTLMMMKT-------MLLTMGFLWTRASYPRFRYDQLMQLLWK 297
Cdd:COG1005  246 VSALATTLFLGGWLGPFPILPLGGLPGIlwfllktLFFIFFFIWVRATLPRYRYDQLMRLGWK 308
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 5-299 1.02e-97

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 291.25  E-value: 1.02e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406   5 FYMIFKtsnLLTMFISILIAVAFLTLMERKILSYMQLRKGPNIVGPQGILQPIMDGVKLLTKEPVRPKQASPIMFTAAPT 84
Cdd:MTH00216   6 IFYLIK---ILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPV 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406  85 LALSLSMFMW--TPMPIPNPIITINLGLLLLMAVSSMGVYSILWSGWASNSKYALIGALRAIAQMISYEVTLGLILMCLT 162
Cdd:MTH00216  83 LSFTLALIVWgvIPYERGVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVL 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406 163 IQTGNYNLETFSFTQEQ-TWLITTTWPMTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGMFALLFLAEYSNIIL 241
Cdd:MTH00216 163 LCVGSLSITEIVLAQNNgIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIIL 242

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 121622406 242 MNTLTCTLFL---NSGNIQSNMFTTLMMMKTMLLTMGFLWTRASYPRFRYDQLMQLLWKQF 299
Cdd:MTH00216 243 MSCLTTILFLggwLSPIKYFKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSY 303
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
17-297 4.36e-93

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 279.38  E-value: 4.36e-93
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406  17 MFISILIAVAFLTLMERKILSYMQLRKGPNIVGPQGILQPIMDGVKLLTKEPVRPKQASPIMFTAAPTLALSLSMFMWTP 96
Cdd:PRK06076  19 ILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLAWAV 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406  97 MPI-PNPIIT-INLGLLLLMAVSSMGVYSILWSGWASNSKYALIGALRAIAQMISYEVTLGLILMCLTIQTGNYNLETFS 174
Cdd:PRK06076  99 IPFgPELVIAdLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLNLSDIV 178

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406 175 FTQEQTWLITTTWPMTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGMFALLFLAEYSNIILMNTLTCTLFLNSG 254
Cdd:PRK06076 179 EAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITTLFLGGW 258

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 121622406 255 NIQSNMFTTLMMMKTMLLTMGFL-----WTRASYPRFRYDQLMQLLWK 297
Cdd:PRK06076 259 LPPFPLGGGIPGAIWFVLKVAFFvflfiWLRATLPRYRYDQLMRLGWK 306
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 11-299 1.98e-85

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 260.72  E-value: 1.98e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406  11 TSNLLTMFISILIAVAFLTLMERKILSYMQLRKGPNIVGPQGILQPIMDGVKLLTKEPVRPKQASPIMFTAAPTLALSLS 90
Cdd:MTH00029  10 TIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLA 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406  91 MFMWTPMPIPNPII--TINLGLLLLMAVSSMGVYSILWSGWASNSKYALIGALRAIAQMISYEVTLGLILMCLTIQTGNY 168
Cdd:MTH00029  90 ILAWAIVTMDQGVFlsDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSL 169

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406 169 NLETFSFTQEQTWLITTTWPMTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGMFALLFLAEYSNIILMNTLTCT 248
Cdd:MTH00029 170 NISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTI 249

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 121622406 249 LFLNS------------------GNIQSNMFTTLMMMKTMLLTMGFLWTRASYPRFRYDQLMQLLWKQF 299
Cdd:MTH00029 250 FFLGGwlspldgiptppeafsifEQIASSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTY 318
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 9-299 8.00e-81

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 247.77  E-value: 8.00e-81
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406   9 FKTSNLLTMfISILIAVAFLTLMERKILSYMQLRKGPNIVGPQGILQPIMDGVKLLTKEPVRPKQASPIMFTAAPTLALS 88
Cdd:MTH00010   5 FFISILLSY-VMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLI 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406  89 LSMFMWTPMPIPNPIITINLGLLLLMAVSSMGVYSILWSGWASNSKYALIGALRAIAQMISYEVTLGLILMCLTIQTGNY 168
Cdd:MTH00010  84 LALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTF 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406 169 NLETFsFTQEQTWLITTTWPMTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGMFALLFLAEYSNIILMNTLTCT 248
Cdd:MTH00010 164 SFSKI-IMSQYSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSV 242

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 121622406 249 LFLnSGNIQSNMFTTLMMMKTMLLTMGFLWTRASYPRFRYDQLMQLLWKQF 299
Cdd:MTH00010 243 FFT-SFIPSIFISDLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSF 292
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 13-299 2.32e-65

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 207.06  E-value: 2.32e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406  13 NLLTMFISILIAVAFLTLMERKILSYMQLRKGPNIVGPQGILQPIMDGVKLLTKEPVRPKQASPIMFTAAPTLALSLSMF 92
Cdd:MTH00090   1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406  93 MWTPMPIPNPIITINLGLLLLMAVSSMGVYSILWSGWASNSKYALIGALRAIAQMISYEVTLGLILMCLTIQTGnynleT 172
Cdd:MTH00090  81 EWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNN-----S 155

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406 173 FSFTQEQTWLITTTWpmtMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGMFALLFLAEYSNIILMNTLTCTLFLN 252
Cdd:MTH00090 156 FSFVSSFSLSLFVIY---LPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK 232

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 121622406 253 sgniqsnmfttLMMMKTMLLTMGFLWTRASYPRFRYDQLMQLLWKQF 299
Cdd:MTH00090 233 -----------FSFLMLFLIFSLLIFIRSSYPRFRYDMMMSMFWFKF 268
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 18-297 4.81e-51

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 170.49  E-value: 4.81e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406  18 FISILIAVAFLTLMERKILSYMQLRKGPNIVGPQGILQPIMDGVKLLTKEPVRPKQASPIMFTAAPTLALSLSMFMWTPM 97
Cdd:MTH00058  11 LLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVVFYCFIY 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406  98 PIPNPIITINLGLLLLMAVSSMGVYSILWSGWASNSKYALIGALRAIAQMISYEVTLGLILMCLTIQTGNYNLETFSFTQ 177
Cdd:MTH00058  91 GSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDFYYSG 170

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406 178 EQTWLITttWPMTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGMFALLFLAEYSNIILMNTLTCTLFLNSGNIq 257
Cdd:MTH00058 171 WLSVLLF--PLIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFGGGFV- 247

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|
gi 121622406 258 snmfttlmMMKTMLLTMGFLWTRASYPRFRYDQLMQLLWK 297
Cdd:MTH00058 248 --------SIMLLFHLLFFMWARATLPRVRYDYFVNFFWE 279
ndhA CHL00032
NADH dehydrogenase subunit 1
 2-297 9.05e-41

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 145.86  E-value: 9.05e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406   2 TKEFY-MIFKTSNLLTMFISILIAVAFLTLMERKILSYMQLRKGPNIVGPQGILQPIMDGVKLLTKEPVRPKQASPIMFT 80
Cdd:CHL00032  20 LKEVYgLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFS 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406  81 AAPTLALSLSMFMWTPMPIPNPII--TINLGLLLLMAVSSMGVYSILWSGWASNSKYALIGALRAIAQMISYEVTLGLIL 158
Cdd:CHL00032 100 IGPSIAVISILLSYLVIPFGYHLVlaDLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCV 179

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406 159 mcLTIQTGNYNLETFSFTQEQTWLITTTW-----PMT-MMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGMFALLF 232
Cdd:CHL00032 180 --LSISLLSNSLSTVDIVEAQSKYGFWGWnlwrqPIGfIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFY 257

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406 233 LAEYSNIILMNTLTCTLFLNSGNIQ------SNMFTTLMMMKTMLLTMGFLWT--------------RASYPRFRYDQLM 292
Cdd:CHL00032 258 VASYLNLLVSSLFVTVLYLGGWNLSipyifiPELFEINKTGGVFGTTIGIFITlaktylflfisittRWTLPRLRMDQLL 337


                 ....*
gi 121622406 293 QLLWK 297
Cdd:CHL00032 338 NLGWK 342
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
14-299 2.39e-32

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 121.83  E-value: 2.39e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406  14 LLTMFISILIAVaFLTLMERKILSYMQLRKGPnivgpqGILQPIMDGVKLLTKEPVRPKQASPImFTAAPTLALS--LSM 91
Cdd:COG0650    8 LLQLLLALLLAP-LLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASWL-FRAAPYVALAamLLA 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406  92 FMWTPMPIPNPIITINLGLLLLMAVSSMGVYSILWSGWASNSKYALIGALRAIAQMISYEVTLGLILMCLTIQTGNYNLE 171
Cdd:COG0650   80 ALLVPVLTTGPPLSFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGSTSLS 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121622406 172 TFSFTQEQTWLITTTWPM---TMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGMFALLFLAEYSNIILMNTLTCT 248
Cdd:COG0650  160 DIVAYQAAHGPLLLSPSLllaAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVLLSLFVN 239

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 121622406 249 LFLnSGNIQSNMFTTLMMMKTMLLTMGFL--WTRASYPRFRYDQLMQLLWKQF 299
Cdd:COG0650  240 LFL-PWGIALTLLLALLLFLLKLLVLAVLlaVIEASTARLRLFRVPDFLWTAF 291
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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