lysine-specific demethylase 6B [Mus musculus]
bifunctional arginine demethylase and lysyl-hydroxylase( domain architecture ID 10651274)
bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 is a dioxygenase that can both act as a arginine demethylase and a lysyl-hydroxylase
List of domain hits
Name | Accession | Description | Interval | E-value | |||
JmjC | pfam02373 | JmjC domain, hydroxylase; The JmjC domain belongs to the Cupin superfamily. JmjC-domain ... |
1375-1483 | 1.88e-36 | |||
JmjC domain, hydroxylase; The JmjC domain belongs to the Cupin superfamily. JmjC-domain proteins may be protein hydroxylases that catalyze a novel histone modification. This is confirmed to be a hydroxylase: the human JmjC protein named Tyw5p unexpectedly acts in the biosynthesis of a hypermodified nucleoside, hydroxy-wybutosine, in tRNA-Phe by catalysing hydroxylation. : Pssm-ID: 396791 Cd Length: 114 Bit Score: 133.96 E-value: 1.88e-36
|
|||||||
JmjC | smart00558 | A domain family that is part of the cupin metalloenzyme superfamily; Probable enzymes, but of ... |
1341-1405 | 9.08e-08 | |||
A domain family that is part of the cupin metalloenzyme superfamily; Probable enzymes, but of unknown functions, that regulate chromatin reorganisation processes (Clissold and Ponting, in press). : Pssm-ID: 214721 Cd Length: 58 Bit Score: 50.33 E-value: 9.08e-08
|
|||||||
BepA | COG4783 | Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
90-154 | 3.74e-03 | |||
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones]; : Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 39.40 E-value: 3.74e-03
|
|||||||
Name | Accession | Description | Interval | E-value | |||
JmjC | pfam02373 | JmjC domain, hydroxylase; The JmjC domain belongs to the Cupin superfamily. JmjC-domain ... |
1375-1483 | 1.88e-36 | |||
JmjC domain, hydroxylase; The JmjC domain belongs to the Cupin superfamily. JmjC-domain proteins may be protein hydroxylases that catalyze a novel histone modification. This is confirmed to be a hydroxylase: the human JmjC protein named Tyw5p unexpectedly acts in the biosynthesis of a hypermodified nucleoside, hydroxy-wybutosine, in tRNA-Phe by catalysing hydroxylation. Pssm-ID: 396791 Cd Length: 114 Bit Score: 133.96 E-value: 1.88e-36
|
|||||||
JmjC | smart00558 | A domain family that is part of the cupin metalloenzyme superfamily; Probable enzymes, but of ... |
1341-1405 | 9.08e-08 | |||
A domain family that is part of the cupin metalloenzyme superfamily; Probable enzymes, but of unknown functions, that regulate chromatin reorganisation processes (Clissold and Ponting, in press). Pssm-ID: 214721 Cd Length: 58 Bit Score: 50.33 E-value: 9.08e-08
|
|||||||
BepA | COG4783 | Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
90-154 | 3.74e-03 | |||
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones]; Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 39.40 E-value: 3.74e-03
|
|||||||
Name | Accession | Description | Interval | E-value | |||
JmjC | pfam02373 | JmjC domain, hydroxylase; The JmjC domain belongs to the Cupin superfamily. JmjC-domain ... |
1375-1483 | 1.88e-36 | |||
JmjC domain, hydroxylase; The JmjC domain belongs to the Cupin superfamily. JmjC-domain proteins may be protein hydroxylases that catalyze a novel histone modification. This is confirmed to be a hydroxylase: the human JmjC protein named Tyw5p unexpectedly acts in the biosynthesis of a hypermodified nucleoside, hydroxy-wybutosine, in tRNA-Phe by catalysing hydroxylation. Pssm-ID: 396791 Cd Length: 114 Bit Score: 133.96 E-value: 1.88e-36
|
|||||||
JmjC | smart00558 | A domain family that is part of the cupin metalloenzyme superfamily; Probable enzymes, but of ... |
1341-1405 | 9.08e-08 | |||
A domain family that is part of the cupin metalloenzyme superfamily; Probable enzymes, but of unknown functions, that regulate chromatin reorganisation processes (Clissold and Ponting, in press). Pssm-ID: 214721 Cd Length: 58 Bit Score: 50.33 E-value: 9.08e-08
|
|||||||
BepA | COG4783 | Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
90-154 | 3.74e-03 | |||
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones]; Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 39.40 E-value: 3.74e-03
|
|||||||
Blast search parameters | ||||
|