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Conserved domains on  [gi|113461980|ref|NP_001026978|]
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large ribosomal subunit protein mL41 precursor [Mus musculus]

Protein Classification

MRP-L27 domain-containing protein( domain architecture ID 10561197)

MRP-L27 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
MRP-L27 pfam09809
Mitochondrial ribosomal protein L27; Members of this family of proteins are components of the ...
 13-125 9.77e-40

Mitochondrial ribosomal protein L27; Members of this family of proteins are components of the mitochondrial ribosome large subunit. They are also involved in apoptosis and cell cycle regulation.


:

Pssm-ID: 286847  Cd Length: 97  Bit Score: 128.60  E-value: 9.77e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 113461980   13 RGADRMSKWTSKRGPRTFTKSRGAKKTGIYTSDRKFVQIKEMVPEFVVPDLTGFKLKPYVNYRAPAGIDTpltakalfqe 92
Cdd:pfam09809   1 KGGNRRVPLTTKRGNKTFYKGTGARGIGRHTSSGRYVINWEKVRTFVVPNLEGFKLKPYVSYNVPELKQS---------- 70

                          90       100       110
                  ....*....|....*....|....*....|...
gi 113461980   93 tvapaiEKDFKEGTFDANNLEKYGFEPTQEGKL 125
Cdd:pfam09809  71 ------FKGFKDGPLDPDLLEKKGKEYVEEGKL 97
 
Name Accession Description Interval E-value
MRP-L27 pfam09809
Mitochondrial ribosomal protein L27; Members of this family of proteins are components of the ...
 13-125 9.77e-40

Mitochondrial ribosomal protein L27; Members of this family of proteins are components of the mitochondrial ribosome large subunit. They are also involved in apoptosis and cell cycle regulation.


Pssm-ID: 286847  Cd Length: 97  Bit Score: 128.60  E-value: 9.77e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 113461980   13 RGADRMSKWTSKRGPRTFTKSRGAKKTGIYTSDRKFVQIKEMVPEFVVPDLTGFKLKPYVNYRAPAGIDTpltakalfqe 92
Cdd:pfam09809   1 KGGNRRVPLTTKRGNKTFYKGTGARGIGRHTSSGRYVINWEKVRTFVVPNLEGFKLKPYVSYNVPELKQS---------- 70

                          90       100       110
                  ....*....|....*....|....*....|...
gi 113461980   93 tvapaiEKDFKEGTFDANNLEKYGFEPTQEGKL 125
Cdd:pfam09809  71 ------FKGFKDGPLDPDLLEKKGKEYVEEGKL 97
 
Name Accession Description Interval E-value
MRP-L27 pfam09809
Mitochondrial ribosomal protein L27; Members of this family of proteins are components of the ...
 13-125 9.77e-40

Mitochondrial ribosomal protein L27; Members of this family of proteins are components of the mitochondrial ribosome large subunit. They are also involved in apoptosis and cell cycle regulation.


Pssm-ID: 286847  Cd Length: 97  Bit Score: 128.60  E-value: 9.77e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 113461980   13 RGADRMSKWTSKRGPRTFTKSRGAKKTGIYTSDRKFVQIKEMVPEFVVPDLTGFKLKPYVNYRAPAGIDTpltakalfqe 92
Cdd:pfam09809   1 KGGNRRVPLTTKRGNKTFYKGTGARGIGRHTSSGRYVINWEKVRTFVVPNLEGFKLKPYVSYNVPELKQS---------- 70

                          90       100       110
                  ....*....|....*....|....*....|...
gi 113461980   93 tvapaiEKDFKEGTFDANNLEKYGFEPTQEGKL 125
Cdd:pfam09809  71 ------FKGFKDGPLDPDLLEKKGKEYVEEGKL 97
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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