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Conserved domains on  [gi|88319966|ref|NP_001034651|]
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ankyrin repeat domain-containing protein 37 isoform a [Mus musculus]

Protein Classification

ankyrin repeat domain-containing protein( domain architecture ID 11429852)

ankyrin repeat domain-containing protein; ANK proteins mediate specific protein-protein interactions without necessarily recognizing specific primary sequences which allows for one ankyrin repeat domain to recognize and bind to a variety of intracellular substrates and may be involved in a wide array of functions

Gene Ontology:  GO:0005515
PubMed:  17176038
SCOP:  4000366

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
10-116 3.00e-17

Ankyrin repeat [Signal transduction mechanisms];


:

Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 76.53  E-value: 3.00e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88319966  10 EDDLKSLLETGASVNAPpDPQEQSPAHLAAGGGLACFLLWQLQTGADLNQQDVLGETPLHKAAKVGSLDCLSLLVASDVQ 89
Cdd:COG0666 100 LEIVKLLLEAGADVNAR-DKDGETPLHLAAYNGNLEIVKLLLEAGADVNAQDNDGNTPLHLAAANGNLEIVKLLLEAGAD 178

                        90       100
                ....*....|....*....|....*..
gi 88319966  90 IGVCNKNGQTAEDLAWSYGFPECARFL 116
Cdd:COG0666 179 VNARDNDGETPLHLAAENGHLEIVKLL 205
 
Name Accession Description Interval E-value
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
10-116 3.00e-17

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 76.53  E-value: 3.00e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88319966  10 EDDLKSLLETGASVNAPpDPQEQSPAHLAAGGGLACFLLWQLQTGADLNQQDVLGETPLHKAAKVGSLDCLSLLVASDVQ 89
Cdd:COG0666 100 LEIVKLLLEAGADVNAR-DKDGETPLHLAAYNGNLEIVKLLLEAGADVNAQDNDGNTPLHLAAANGNLEIVKLLLEAGAD 178

                        90       100
                ....*....|....*....|....*..
gi 88319966  90 IGVCNKNGQTAEDLAWSYGFPECARFL 116
Cdd:COG0666 179 VNARDNDGETPLHLAAENGHLEIVKLL 205
Ank_2 pfam12796
Ankyrin repeats (3 copies);
36-116 7.16e-14

Ankyrin repeats (3 copies);


Pssm-ID: 463710 [Multi-domain]  Cd Length: 91  Bit Score: 63.21  E-value: 7.16e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88319966    36 HLAAGGGLACFLLWQLQTGADLNQQDVLGETPLHKAAKVGSLDCLSLLVasDVQIGVCNKNGQTAEDLAWSYGFPECARF 115
Cdd:pfam12796   2 HLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLL--EHADVNLKDNGRTALHYAARSGHLEIVKL 79


                  .
gi 88319966   116 L 116
Cdd:pfam12796  80 L 80
PHA02874 PHA02874
ankyrin repeat protein; Provisional
 8-121 4.30e-07

ankyrin repeat protein; Provisional


Pssm-ID: 165205 [Multi-domain]  Cd Length: 434  Bit Score: 48.04  E-value: 4.30e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88319966    8 LEEDDLKSLLETGASVNAPpDPQEQSPAHLAAGGGLACFLLWQLQTGADLNQQDVLGETPLHKAAKVGSLDCLSLLVASD 87
Cdd:PHA02874 102 IEKDMIKTILDCGIDVNIK-DAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKG 180

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 88319966   88 VQIGVCNKNGQTAEDLAWSYGFPECARFL------TMIKC 121
Cdd:PHA02874 181 AYANVKDNNGESPLHNAAEYGDYACIKLLidhgnhIMNKC 220
ANK smart00248
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ...
 64-90 8.98e-03

ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.


Pssm-ID: 197603 [Multi-domain]  Cd Length: 30  Bit Score: 32.56  E-value: 8.98e-03
                           10        20
                   ....*....|....*....|....*..
gi 88319966     64 GETPLHKAAKVGSLDCLSLLVASDVQI 90
Cdd:smart00248   2 GRTPLHLAAENGNLEVVKLLLDKGADI 28
 
Name Accession Description Interval E-value
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
10-116 3.00e-17

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 76.53  E-value: 3.00e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88319966  10 EDDLKSLLETGASVNAPpDPQEQSPAHLAAGGGLACFLLWQLQTGADLNQQDVLGETPLHKAAKVGSLDCLSLLVASDVQ 89
Cdd:COG0666 100 LEIVKLLLEAGADVNAR-DKDGETPLHLAAYNGNLEIVKLLLEAGADVNAQDNDGNTPLHLAAANGNLEIVKLLLEAGAD 178

                        90       100
                ....*....|....*....|....*..
gi 88319966  90 IGVCNKNGQTAEDLAWSYGFPECARFL 116
Cdd:COG0666 179 VNARDNDGETPLHLAAENGHLEIVKLL 205
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
13-116 5.92e-16

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 73.06  E-value: 5.92e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88319966  13 LKSLLETGASVNAPpDPQEQSPAHLAAGGG---LACFLLwqlQTGADLNQQDVLGETPLHKAAKVGSLDCLSLLVASDVQ 89
Cdd:COG0666 136 VKLLLEAGADVNAQ-DNDGNTPLHLAAANGnleIVKLLL---EAGADVNARDNDGETPLHLAAENGHLEIVKLLLEAGAD 211

                        90       100
                ....*....|....*....|....*..
gi 88319966  90 IGVCNKNGQTAEDLAWSYGFPECARFL 116
Cdd:COG0666 212 VNAKDNDGKTALDLAAENGNLEIVKLL 238
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
1-116 2.76e-15

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 71.14  E-value: 2.76e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88319966   1 MLLLSCNLEEDDLKSLLETGASVNAPPDPQEQSPAHLAAGGGLACFLLWQLQTGADLNQQDVLGETPLHKAAKVGSLDCL 80
Cdd:COG0666  57 LLLAAALAGDLLVALLLLAAGADINAKDDGGNTLLHAAARNGDLEIVKLLLEAGADVNARDKDGETPLHLAAYNGNLEIV 136

                        90       100       110
                ....*....|....*....|....*....|....*.
gi 88319966  81 SLLVASDVQIGVCNKNGQTAEDLAWSYGFPECARFL 116
Cdd:COG0666 137 KLLLEAGADVNAQDNDGNTPLHLAAANGNLEIVKLL 172
Ank_2 pfam12796
Ankyrin repeats (3 copies);
36-116 7.16e-14

Ankyrin repeats (3 copies);


Pssm-ID: 463710 [Multi-domain]  Cd Length: 91  Bit Score: 63.21  E-value: 7.16e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88319966    36 HLAAGGGLACFLLWQLQTGADLNQQDVLGETPLHKAAKVGSLDCLSLLVasDVQIGVCNKNGQTAEDLAWSYGFPECARF 115
Cdd:pfam12796   2 HLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLL--EHADVNLKDNGRTALHYAARSGHLEIVKL 79


                  .
gi 88319966   116 L 116
Cdd:pfam12796  80 L 80
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
13-116 1.94e-10

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 57.66  E-value: 1.94e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88319966  13 LKSLLETGASVNAPpDPQEQSPAHLAAGGG---LACFLLwqlQTGADLNQQDVLGETPLHKAAKVGSLDCLSLLVASDVQ 89
Cdd:COG0666 169 VKLLLEAGADVNAR-DNDGETPLHLAAENGhleIVKLLL---EAGADVNAKDNDGKTALDLAAENGNLEIVKLLLEAGAD 244

                        90       100
                ....*....|....*....|....*..
gi 88319966  90 IGVCNKNGQTAEDLAWSYGFPECARFL 116
Cdd:COG0666 245 LNAKDKDGLTALLLAAAAGAALIVKLL 271
Ank_4 pfam13637
Ankyrin repeats (many copies);
66-116 7.48e-09

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 49.20  E-value: 7.48e-09
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 88319966    66 TPLHKAAKVGSLDCLSLLVASDVQIGVCNKNGQTAEDLAWSYGFPECARFL 116
Cdd:pfam13637   3 TALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLL 53
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
1-116 1.64e-08

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 52.26  E-value: 1.64e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88319966   1 MLLLSCNLEEDDLKSLLETGASVNAPPDPQEQSPAHLAAGGGLACFLLWQLQTGADLNQQDVLGETPLHKAAKVGSLDCL 80
Cdd:COG0666  24 LLLAAALLLLLLLLLLLLLALLALALADALGALLLLAAALAGDLLVALLLLAAGADINAKDDGGNTLLHAAARNGDLEIV 103

                        90       100       110
                ....*....|....*....|....*....|....*.
gi 88319966  81 SLLVASDVQIGVCNKNGQTAEDLAWSYGFPECARFL 116
Cdd:COG0666 104 KLLLEAGADVNARDKDGETPLHLAAYNGNLEIVKLL 139
Ank_2 pfam12796
Ankyrin repeats (3 copies);
13-92 5.12e-08

Ankyrin repeats (3 copies);


Pssm-ID: 463710 [Multi-domain]  Cd Length: 91  Bit Score: 47.80  E-value: 5.12e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88319966    13 LKSLLETGASVNAPpDPQEQSPAHLAAGGGLAcFLLWQLQTGADLNQQDvLGETPLHKAAKVGSLDCLSLLVASDVQIGV 92
Cdd:pfam12796  13 VKLLLENGADANLQ-DKNGRTALHLAAKNGHL-EIVKLLLEHADVNLKD-NGRTALHYAARSGHLEIVKLLLEKGADINV 89
Ank_5 pfam13857
Ankyrin repeats (many copies);
55-104 1.38e-07

Ankyrin repeats (many copies);


Pssm-ID: 433530 [Multi-domain]  Cd Length: 56  Bit Score: 45.80  E-value: 1.38e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 88319966    55 ADLNQQDVLGETPLHKAAKVGSLDCLSLLVASDVQIGVCNKNGQTAEDLA 104
Cdd:pfam13857   7 IDLNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDLA 56
PHA02874 PHA02874
ankyrin repeat protein; Provisional
 8-121 4.30e-07

ankyrin repeat protein; Provisional


Pssm-ID: 165205 [Multi-domain]  Cd Length: 434  Bit Score: 48.04  E-value: 4.30e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88319966    8 LEEDDLKSLLETGASVNAPpDPQEQSPAHLAAGGGLACFLLWQLQTGADLNQQDVLGETPLHKAAKVGSLDCLSLLVASD 87
Cdd:PHA02874 102 IEKDMIKTILDCGIDVNIK-DAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKG 180

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 88319966   88 VQIGVCNKNGQTAEDLAWSYGFPECARFL------TMIKC 121
Cdd:PHA02874 181 AYANVKDNNGESPLHNAAEYGDYACIKLLidhgnhIMNKC 220
PHA02874 PHA02874
ankyrin repeat protein; Provisional
 13-99 1.23e-06

ankyrin repeat protein; Provisional


Pssm-ID: 165205 [Multi-domain]  Cd Length: 434  Bit Score: 46.88  E-value: 1.23e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88319966   13 LKSLLETGASVNAPpDPQEQSPAHLAAGGGLACFLLWQLQTGADLNQQDVLGETPLHKAAKVGSLDCLSLLVASDVQIGV 92
Cdd:PHA02874 140 IKMLFEYGADVNIE-DDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMN 218


                 ....*..
gi 88319966   93 CNKNGQT 99
Cdd:PHA02874 219 KCKNGFT 225
Ank_4 pfam13637
Ankyrin repeats (many copies);
33-84 1.51e-06

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 43.03  E-value: 1.51e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 88319966    33 SPAHLAAGGGlaCFLLWQ--LQTGADLNQQDVLGETPLHKAAKVGSLDCLSLLV 84
Cdd:pfam13637   3 TALHAAAASG--HLELLRllLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
Ank_2 pfam12796
Ankyrin repeats (3 copies);
68-116 7.57e-06

Ankyrin repeats (3 copies);


Pssm-ID: 463710 [Multi-domain]  Cd Length: 91  Bit Score: 42.03  E-value: 7.57e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*....
gi 88319966    68 LHKAAKVGSLDCLSLLVASDVQIGVCNKNGQTAEDLAWSYGFPECARFL 116
Cdd:pfam12796   1 LHLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLL 49
PTZ00322 PTZ00322
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
 10-116 1.19e-04

6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional


Pssm-ID: 140343 [Multi-domain]  Cd Length: 664  Bit Score: 41.04  E-value: 1.19e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88319966   10 EDDLKSLLETGASVNAPP---DPQE---QSPAHL---------AAGGGLACFLLwqLQTGADLNQQDVLGETPLHKAAKV 74
Cdd:PTZ00322  48 DTHLEALEATENKDATPDhnlTTEEvidPVVAHMltvelcqlaASGDAVGARIL--LTGGADPNCRDYDGRTPLHIACAN 125

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 88319966   75 GSLDCLSLLVASDVQIGVCNKNGQTAEDLAWSYGFPECARFL 116
Cdd:PTZ00322 126 GHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLL 167
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
13-100 4.65e-04

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 39.17  E-value: 4.65e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88319966  13 LKSLLETGASVNAPpDPQEQSPAHLAAGGGLACFLLWQLQTGADLNQQDVLGETPLHKAAKVGSLDCLSLLVASDVQIGV 92
Cdd:COG0666 202 VKLLLEAGADVNAK-DNDGKTALDLAAENGNLEIVKLLLEAGADLNAKDKDGLTALLLAAAAGAALIVKLLLLALLLLAA 280


                ....*...
gi 88319966  93 CNKNGQTA 100
Cdd:COG0666 281 ALLDLLTL 288
PHA03095 PHA03095
ankyrin-like protein; Provisional
 2-102 8.57e-04

ankyrin-like protein; Provisional


Pssm-ID: 222980 [Multi-domain]  Cd Length: 471  Bit Score: 38.47  E-value: 8.57e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88319966    2 LLLSCNLEE--DDLKSLLETGASVNAPpDPQEQSPAHLaagggLACF--------LLwqLQTGADLNQQDVLGETPLHKA 71
Cdd:PHA03095  53 LYLHYSSEKvkDIVRLLLEAGADVNAP-ERCGFTPLHL-----YLYNattldvikLL--IKAGADVNAKDKVGRTPLHVY 124

                         90       100       110
                 ....*....|....*....|....*....|...
gi 88319966   72 AKVGSLD--CLSLLVASDVQIGVCNKNGQTAED 102
Cdd:PHA03095 125 LSGFNINpkVIRLLLRKGADVNALDLYGMTPLA 157
PLN03192 PLN03192
Voltage-dependent potassium channel; Provisional
 28-100 2.10e-03

Voltage-dependent potassium channel; Provisional


Pssm-ID: 215625 [Multi-domain]  Cd Length: 823  Bit Score: 37.54  E-value: 2.10e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 88319966   28 DPQEQSPAHLAAGGGLACFLLWQLQTGADLNQQDVLGETPLHKAAKVGSLDCLSLLVASDVQIGVCNKNGQTA 100
Cdd:PLN03192 522 DPNMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTA 594
PHA02878 PHA02878
ankyrin repeat protein; Provisional
 11-84 3.34e-03

ankyrin repeat protein; Provisional


Pssm-ID: 222939 [Multi-domain]  Cd Length: 477  Bit Score: 36.78  E-value: 3.34e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 88319966   11 DDLKSLLETGASVNAPPDPQEQSPAHLAAGGGLACFLLwqLQTGADLNQQDVLGETPLHKAAKVGS-LDCLSLLV 84
Cdd:PHA02878 249 DILKLLLEHGVDVNAKSYILGLTALHSSIKSERKLKLL--LEYGADINSLNSYKLTPLSSAVKQYLcINIGRILI 321
PHA03100 PHA03100
ankyrin repeat protein; Provisional
 54-99 3.64e-03

ankyrin repeat protein; Provisional


Pssm-ID: 222984 [Multi-domain]  Cd Length: 422  Bit Score: 36.57  E-value: 3.64e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 88319966   54 GADLNQQDVLGETPLHKAAKVGSLDCLSLLVASDVQIGVCNKNGQT 99
Cdd:PHA03100 182 GVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDT 227
Ank_5 pfam13857
Ankyrin repeats (many copies);
16-71 3.70e-03

Ankyrin repeats (many copies);


Pssm-ID: 433530 [Multi-domain]  Cd Length: 56  Bit Score: 33.86  E-value: 3.70e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 88319966    16 LLETG-ASVNAPpDPQEQSPAHLAAGGGLACFLLWQLQTGADLNQQDVLGETPLHKA 71
Cdd:pfam13857   1 LLEHGpIDLNRL-DGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDLA 56
PHA02876 PHA02876
ankyrin repeat protein; Provisional
 51-90 4.63e-03

ankyrin repeat protein; Provisional


Pssm-ID: 165207 [Multi-domain]  Cd Length: 682  Bit Score: 36.58  E-value: 4.63e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 88319966   51 LQTGADLNQQDVLGETPLHKAAKVGSLDCLSLLVA--SDVQI 90
Cdd:PHA02876 165 LEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSygADVNI 206
ANK smart00248
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ...
 64-90 8.98e-03

ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.


Pssm-ID: 197603 [Multi-domain]  Cd Length: 30  Bit Score: 32.56  E-value: 8.98e-03
                           10        20
                   ....*....|....*....|....*..
gi 88319966     64 GETPLHKAAKVGSLDCLSLLVASDVQI 90
Cdd:smart00248   2 GRTPLHLAAENGNLEVVKLLLDKGADI 28
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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