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Conserved domains on  [gi|212276011|ref|NP_001131020|]
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protein FAM25C [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FAM25 super family cl24405
FAM25 family; FAM25 is a family of proteins found in eukaryotes. Proteins in this family are ...
 24-88 2.63e-10

FAM25 family; FAM25 is a family of proteins found in eukaryotes. Proteins in this family are typically between 54 and 95 amino acids in length. There is a conserved GEK sequence motif. The function is not known.


The actual alignment was detected with superfamily member pfam15825:

Pssm-ID: 464896  Cd Length: 65  Bit Score: 51.04  E-value: 2.63e-10
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 212276011  24 AIHAVEEVVKEVVGHAKETGEKAIAEAIKKAQESGDKKMKEITETVTNTVTNAITHAAESLDKLG 88
Cdd:pfam15825  1 AVHAVEGVVKEVVEHAKEAGEKAIADALKKAQESGDKVVKEVTETVTNTVTNAVTHAAEGLGKLG 65
 
Name Accession Description Interval E-value
FAM25 pfam15825
FAM25 family; FAM25 is a family of proteins found in eukaryotes. Proteins in this family are ...
 24-88 2.63e-10

FAM25 family; FAM25 is a family of proteins found in eukaryotes. Proteins in this family are typically between 54 and 95 amino acids in length. There is a conserved GEK sequence motif. The function is not known.


Pssm-ID: 464896  Cd Length: 65  Bit Score: 51.04  E-value: 2.63e-10
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 212276011  24 AIHAVEEVVKEVVGHAKETGEKAIAEAIKKAQESGDKKMKEITETVTNTVTNAITHAAESLDKLG 88
Cdd:pfam15825  1 AVHAVEGVVKEVVEHAKEAGEKAIADALKKAQESGDKVVKEVTETVTNTVTNAVTHAAEGLGKLG 65
 
Name Accession Description Interval E-value
FAM25 pfam15825
FAM25 family; FAM25 is a family of proteins found in eukaryotes. Proteins in this family are ...
 24-88 2.63e-10

FAM25 family; FAM25 is a family of proteins found in eukaryotes. Proteins in this family are typically between 54 and 95 amino acids in length. There is a conserved GEK sequence motif. The function is not known.


Pssm-ID: 464896  Cd Length: 65  Bit Score: 51.04  E-value: 2.63e-10
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 212276011  24 AIHAVEEVVKEVVGHAKETGEKAIAEAIKKAQESGDKKMKEITETVTNTVTNAITHAAESLDKLG 88
Cdd:pfam15825  1 AVHAVEGVVKEVVEHAKEAGEKAIADALKKAQESGDKVVKEVTETVTNTVTNAVTHAAEGLGKLG 65
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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