|
Name |
Accession |
Description |
Interval |
E-value |
| CCDC154 |
pfam15450 |
Coiled-coil domain-containing protein 154; CCDC154 is an osteopetrosis-related protein that ... |
56-576 |
0e+00 |
|
Coiled-coil domain-containing protein 154; CCDC154 is an osteopetrosis-related protein that suppresses cell proliferation by inducing G2/M arrest.
Pssm-ID: 464723 [Multi-domain] Cd Length: 526 Bit Score: 731.64 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 56 STASVPEQDTAKHWNQLEQWVVELQAEVACLREHKQRCERATRSLLRELLQVRARVQLQGSELRQLQQEARPAAQAPEKE 135
Cdd:pfam15450 2 SSTSVPEQDTPKRWKQLEQWVADLQAEVVSLRGHKERCEHATLSLLRELLQVRAHVQLQDSELKQLRQEVQQAARAPEKE 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 136 APEFSGL--QNQMQALDKRLVEVREALTRLRRRQVQQEAERRGAEQEAGLRLAKLTDLLQQEEQGREVACGALQKNQEDS 213
Cdd:pfam15450 82 ALEFPGPqnQNQMQALDKRLVEVREALTQIRRKQALQDSERKGAEQEANLRLTKLTGKLKQEEQGREAACSALQKSQEEA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 214 SRRVDLEVARMQAQVTKLGEEVSLRFLKREAKLCGFLQKSFLALEKRMKASESSRLKLEGSLRGELESRWEKLRGLMEER 293
Cdd:pfam15450 162 SQKVDHEVARMQAQVTKLGEEMSLRFLKREAKLCSFLQKSFLALEKRMKASESTRLKAESSLREELEGRWQKLQELTEER 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 294 LRALQGQH--EESHLLEQCQGLDAAVAQLTKFVQQNQASLNRVLLAEEKAWDAKGRLEESRAGELAAYVQENLEAAQLAG 371
Cdd:pfam15450 242 LRALQGQReqEEGHLLEQCRGLDAAVVQLTKFVRQNQVSLNRVLLAEQKARDAKGQLEESQAGELASYVQENLEAVQLAG 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 372 ELARQEMHGELVLLREKSRALEASVAQLAGQLKELSGHLPALSSRLDLQEQMLGLRLSEAKTEWEGAERKSLEDLARWRK 451
Cdd:pfam15450 322 ELAQQETQGALELLQEKSQVLEGSVAELVRQVKDLSDHFLALSWRLDLQEQTLGLKLSEAKKEWEGAERKSLEDLAQWQK 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 452 EVTEHLRGVREKVDGLPQQIESVSDKCLLHKSDSDLRISAEGKAREFKVGALRQELATLLSSVQLLKEDNPGRKIAEMQG 531
Cdd:pfam15450 402 EVAAHLREVQEKVDSLPRQIEAVSDKCVLHKSDSDLKISAEGKAREFEVEAMRQELAALLSSVQLLKEGNPGRKIAEIQG 481
|
490 500 510 520
....*....|....*....|....*....|....*....|....*
gi 221136814 532 KLATFQNQIMKLENCVQANKTIQNLRFNTEARLRTQEMATLWESV 576
Cdd:pfam15450 482 KLATFQNQIIKLENSIQDNKTIQNLKFNTETKLRTEEIATLRESV 526
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
66-574 |
1.52e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 71.12 E-value: 1.52e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 66 AKHWNQLEQWVVELQAEVACLREHKQRCERATRSLLRELLQVRARVQLQGSELRQLQQEARPAAQAPEKEAPEFSGLQNQ 145
Cdd:COG1196 231 LLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEER 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 146 MQALDKRLVEVREALTRLRRRQVQQEAERRGAEQEAGLRLAKLTDLLQQEEQGREVACGALQKNQEDSSRRVDLEVARMQ 225
Cdd:COG1196 311 RRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLE 390
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 226 AQVTKLGEEVSLRFLKREAKLcgfLQKSFLALEKRMKASESSRLKLEGSLRGELESRWEKLRGLMEERLRALQGQHEESH 305
Cdd:COG1196 391 ALRAAAELAAQLEELEEAEEA---LLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAE 467
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 306 LLEQCQGLDAAVAQLTKFVQQNQASLNRVLLAEE----------KAWDAKGRLEESRAGELAAYVQENLEAAqLAGELAR 375
Cdd:COG1196 468 LLEEAALLEAALAELLEELAEAAARLLLLLEAEAdyegflegvkAALLLAGLRGLAGAVAVLIGVEAAYEAA-LEAALAA 546
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 376 QEMHGELVLLREKSRALEASVAQLAGQLKELSGHL----PALSSRLDLQEQMLGLRLSEAKTEWEGAERKSLEDLARWRK 451
Cdd:COG1196 547 ALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKirarAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRT 626
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 452 EVTEHLRGVREKVDGLPQQIESVSdkclLHKSDSDLRISAEGKAREFKVGALRQELATLLSSVQLLKEDNpgRKIAEMQG 531
Cdd:COG1196 627 LVAARLEAALRRAVTLAGRLREVT----LEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEE--LELEEALL 700
|
490 500 510 520
....*....|....*....|....*....|....*....|...
gi 221136814 532 KLATFQNQIMKLENCVQANKTIQNLRFNTEARLRTQEMATLWE 574
Cdd:COG1196 701 AEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLE 743
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
117-406 |
1.73e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 51.60 E-value: 1.73e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 117 ELRQLQQEARPAAQAPEKE----APEFSGLQNQMQALDKRLVEVREALTRLRRRQVQQEAERRGAEQEAGLRLAKLTDLL 192
Cdd:TIGR02168 681 ELEEKIEELEEKIAELEKAlaelRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELE 760
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 193 QQEEQGREVACGALQKNQEDSSRRVDLE--VARMQAQVTKLGEEvsLRFLKREAKLcgfLQKSFLALEKRMKASESSRLK 270
Cdd:TIGR02168 761 AEIEELEERLEEAEEELAEAEAEIEELEaqIEQLKEELKALREA--LDELRAELTL---LNEEAANLRERLESLERRIAA 835
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 271 LEGSLRgELESRWEKLRGLME------ERLRALQGQHEES--HLLEQCQGLDAAVAQLTKFVQQNQASLNRVllaEEKAW 342
Cdd:TIGR02168 836 TERRLE-DLEEQIEELSEDIEslaaeiEELEELIEELESEleALLNERASLEEALALLRSELEELSEELREL---ESKRS 911
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 221136814 343 DAKGRLEESRAgELAAYVQE----NLEAAQLAGELARQ-----EMHGELVLLREKSRA-LEASVAQLAGQLKEL 406
Cdd:TIGR02168 912 ELRRELEELRE-KLAQLELRleglEVRIDNLQERLSEEysltlEEAEALENKIEDDEEeARRRLKRLENKIKEL 984
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
78-572 |
4.02e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 40.41 E-value: 4.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 78 ELQAEVACLREHKQRCERATRSLLRELLQVRARVQLQGSELRQLQQEArpaaqapEKEAPEFSGLQNQMQALDKRLVEVR 157
Cdd:PRK02224 255 TLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEA-------GLDDADAEAVEARREELEDRDEELR 327
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 158 EALTRLRRRQVQQEAERRGAEQEAglrlaklTDLLQQEEQGREVAcGALQKNQEDSSRRVDlEVARMQAQVTKLGEEVSL 237
Cdd:PRK02224 328 DRLEECRVAAQAHNEEAESLREDA-------DDLEERAEELREEA-AELESELEEAREAVE-DRREEIEELEEEIEELRE 398
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 238 RFLKREAKLCGFLQKSFLALEKRMKASEsSRLKLEGSLRgELESRWEKLRGLMEERLRALQGQ--HEESHL--LEQCQG- 312
Cdd:PRK02224 399 RFGDAPVDLGNAEDFLEELREERDELRE-REAELEATLR-TARERVEEAEALLEAGKCPECGQpvEGSPHVetIEEDREr 476
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 313 ---LDAAVAQLTKFVQQNQASLNRVLLAEEKAwDAKGRLEESR--AGELAAYVQENLEAAQLAGELAR---QEMHGELVL 384
Cdd:PRK02224 477 veeLEAELEDLEEEVEEVEERLERAEDLVEAE-DRIERLEERRedLEELIAERRETIEEKRERAEELReraAELEAEAEE 555
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 385 LREKSRALEASVAQLAGQLKELSGHLPALSSRLD-LQEQMLGLRLSEAKTEWEGAERKSLEDLARWRKEVTEHLRGVREK 463
Cdd:PRK02224 556 KREAAAEAEEEAEEAREEVAELNSKLAELKERIEsLERIRTLLAAIADAEDEIERLREKREALAELNDERRERLAEKRER 635
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 464 VDglpqQIESVSDKCLLHKSDSDLRISAEGKAR-EFKVGALRQELATLLSSVQLLKedNPGRKIAEMQGKLATFQNQIMK 542
Cdd:PRK02224 636 KR----ELEAEFDEARIEEAREDKERAEEYLEQvEEKLDELREERDDLQAEIGAVE--NELEELEELRERREALENRVEA 709
|
490 500 510
....*....|....*....|....*....|
gi 221136814 543 LENCVQANKTIQNLRFNTEARLRTQEMATL 572
Cdd:PRK02224 710 LEALYDEAEELESMYGDLRAELRQRNVETL 739
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CCDC154 |
pfam15450 |
Coiled-coil domain-containing protein 154; CCDC154 is an osteopetrosis-related protein that ... |
56-576 |
0e+00 |
|
Coiled-coil domain-containing protein 154; CCDC154 is an osteopetrosis-related protein that suppresses cell proliferation by inducing G2/M arrest.
Pssm-ID: 464723 [Multi-domain] Cd Length: 526 Bit Score: 731.64 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 56 STASVPEQDTAKHWNQLEQWVVELQAEVACLREHKQRCERATRSLLRELLQVRARVQLQGSELRQLQQEARPAAQAPEKE 135
Cdd:pfam15450 2 SSTSVPEQDTPKRWKQLEQWVADLQAEVVSLRGHKERCEHATLSLLRELLQVRAHVQLQDSELKQLRQEVQQAARAPEKE 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 136 APEFSGL--QNQMQALDKRLVEVREALTRLRRRQVQQEAERRGAEQEAGLRLAKLTDLLQQEEQGREVACGALQKNQEDS 213
Cdd:pfam15450 82 ALEFPGPqnQNQMQALDKRLVEVREALTQIRRKQALQDSERKGAEQEANLRLTKLTGKLKQEEQGREAACSALQKSQEEA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 214 SRRVDLEVARMQAQVTKLGEEVSLRFLKREAKLCGFLQKSFLALEKRMKASESSRLKLEGSLRGELESRWEKLRGLMEER 293
Cdd:pfam15450 162 SQKVDHEVARMQAQVTKLGEEMSLRFLKREAKLCSFLQKSFLALEKRMKASESTRLKAESSLREELEGRWQKLQELTEER 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 294 LRALQGQH--EESHLLEQCQGLDAAVAQLTKFVQQNQASLNRVLLAEEKAWDAKGRLEESRAGELAAYVQENLEAAQLAG 371
Cdd:pfam15450 242 LRALQGQReqEEGHLLEQCRGLDAAVVQLTKFVRQNQVSLNRVLLAEQKARDAKGQLEESQAGELASYVQENLEAVQLAG 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 372 ELARQEMHGELVLLREKSRALEASVAQLAGQLKELSGHLPALSSRLDLQEQMLGLRLSEAKTEWEGAERKSLEDLARWRK 451
Cdd:pfam15450 322 ELAQQETQGALELLQEKSQVLEGSVAELVRQVKDLSDHFLALSWRLDLQEQTLGLKLSEAKKEWEGAERKSLEDLAQWQK 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 452 EVTEHLRGVREKVDGLPQQIESVSDKCLLHKSDSDLRISAEGKAREFKVGALRQELATLLSSVQLLKEDNPGRKIAEMQG 531
Cdd:pfam15450 402 EVAAHLREVQEKVDSLPRQIEAVSDKCVLHKSDSDLKISAEGKAREFEVEAMRQELAALLSSVQLLKEGNPGRKIAEIQG 481
|
490 500 510 520
....*....|....*....|....*....|....*....|....*
gi 221136814 532 KLATFQNQIMKLENCVQANKTIQNLRFNTEARLRTQEMATLWESV 576
Cdd:pfam15450 482 KLATFQNQIIKLENSIQDNKTIQNLKFNTETKLRTEEIATLRESV 526
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
66-574 |
1.52e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 71.12 E-value: 1.52e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 66 AKHWNQLEQWVVELQAEVACLREHKQRCERATRSLLRELLQVRARVQLQGSELRQLQQEARPAAQAPEKEAPEFSGLQNQ 145
Cdd:COG1196 231 LLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEER 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 146 MQALDKRLVEVREALTRLRRRQVQQEAERRGAEQEAGLRLAKLTDLLQQEEQGREVACGALQKNQEDSSRRVDLEVARMQ 225
Cdd:COG1196 311 RRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLE 390
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 226 AQVTKLGEEVSLRFLKREAKLcgfLQKSFLALEKRMKASESSRLKLEGSLRGELESRWEKLRGLMEERLRALQGQHEESH 305
Cdd:COG1196 391 ALRAAAELAAQLEELEEAEEA---LLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAE 467
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 306 LLEQCQGLDAAVAQLTKFVQQNQASLNRVLLAEE----------KAWDAKGRLEESRAGELAAYVQENLEAAqLAGELAR 375
Cdd:COG1196 468 LLEEAALLEAALAELLEELAEAAARLLLLLEAEAdyegflegvkAALLLAGLRGLAGAVAVLIGVEAAYEAA-LEAALAA 546
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 376 QEMHGELVLLREKSRALEASVAQLAGQLKELSGHL----PALSSRLDLQEQMLGLRLSEAKTEWEGAERKSLEDLARWRK 451
Cdd:COG1196 547 ALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKirarAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRT 626
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 452 EVTEHLRGVREKVDGLPQQIESVSdkclLHKSDSDLRISAEGKAREFKVGALRQELATLLSSVQLLKEDNpgRKIAEMQG 531
Cdd:COG1196 627 LVAARLEAALRRAVTLAGRLREVT----LEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEE--LELEEALL 700
|
490 500 510 520
....*....|....*....|....*....|....*....|...
gi 221136814 532 KLATFQNQIMKLENCVQANKTIQNLRFNTEARLRTQEMATLWE 574
Cdd:COG1196 701 AEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLE 743
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
150-448 |
3.21e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 53.79 E-value: 3.21e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 150 DKRLVEVREALTRLRRRQVQQEAERRGAEQEAGLRLAKLTDLLQQEEQGREVACGALQKNQEDSSRRVDL-----EVARM 224
Cdd:COG1196 221 ELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEyellaELARL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 225 QAQVTKLGEEVS--LRFLKREAKLCGFLQKSFLALEKRMKASESSRLKLEGSLRGELESRWEKLRGLMEERLRALQGQHE 302
Cdd:COG1196 301 EQDIARLEERRRelEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEE 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 303 ESHLLEQCQGLDAAVAQLTKFVQQNQASLNRVLLAEEKAWDAKGRLEESRAGELAAYVQENLEAAQLAGELARQEmhGEL 382
Cdd:COG1196 381 LEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELE--EEE 458
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 221136814 383 VLLREKSRALEASVAQLAGQLKELSGHLPALSSRLDLQEQMLGLRLSEAKTEWEGAERKSLEDLAR 448
Cdd:COG1196 459 EALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAG 524
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
117-406 |
1.73e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 51.60 E-value: 1.73e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 117 ELRQLQQEARPAAQAPEKE----APEFSGLQNQMQALDKRLVEVREALTRLRRRQVQQEAERRGAEQEAGLRLAKLTDLL 192
Cdd:TIGR02168 681 ELEEKIEELEEKIAELEKAlaelRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELE 760
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 193 QQEEQGREVACGALQKNQEDSSRRVDLE--VARMQAQVTKLGEEvsLRFLKREAKLcgfLQKSFLALEKRMKASESSRLK 270
Cdd:TIGR02168 761 AEIEELEERLEEAEEELAEAEAEIEELEaqIEQLKEELKALREA--LDELRAELTL---LNEEAANLRERLESLERRIAA 835
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 271 LEGSLRgELESRWEKLRGLME------ERLRALQGQHEES--HLLEQCQGLDAAVAQLTKFVQQNQASLNRVllaEEKAW 342
Cdd:TIGR02168 836 TERRLE-DLEEQIEELSEDIEslaaeiEELEELIEELESEleALLNERASLEEALALLRSELEELSEELREL---ESKRS 911
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 221136814 343 DAKGRLEESRAgELAAYVQE----NLEAAQLAGELARQ-----EMHGELVLLREKSRA-LEASVAQLAGQLKEL 406
Cdd:TIGR02168 912 ELRRELEELRE-KLAQLELRleglEVRIDNLQERLSEEysltlEEAEALENKIEDDEEeARRRLKRLENKIKEL 984
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
71-444 |
2.32e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 47.62 E-value: 2.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 71 QLEQWVVELQAEVACLREhKQRCERATRSLLRELLQVRARVQLQGSELRQLQQEARPAAQAPEKEAPEFSGLQNQMQALD 150
Cdd:COG1196 377 AEEELEELAEELLEALRA-AAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELE 455
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 151 KRLVEVREALTRLRRRQVQQEAERRGAEQEAGLRLAKLTDLLQQEEQGREVACGALQKNQEDSSRRVDLEVARMQAQVTK 230
Cdd:COG1196 456 EEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAA 535
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 231 -----------LGEEVSLRFLKREAKLCGFLQK------SFLALEKRMKASESSRLKLEGSL---RGELESRWEKLRGLM 290
Cdd:COG1196 536 yeaaleaalaaALQNIVVEDDEVAAAAIEYLKAakagraTFLPLDKIRARAALAAALARGAIgaaVDLVASDLREADARY 615
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 291 EERLRALQGQHEESHLLEQCQGLDAAVAQLTKFV-----QQNQASLNRVLLAEEKAWDAKGRLEESRAGELAAYVQENLE 365
Cdd:COG1196 616 YVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVtlegeGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELEL 695
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 221136814 366 AAQLAGELARQEMHGELVLLREKSRALEASVAQLAGQLKELSGHLPALSSRLDLQEQMLGLRLSEAKTEWEgAERKSLE 444
Cdd:COG1196 696 EEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELE-RELERLE 773
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
62-394 |
2.67e-04 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 44.16 E-value: 2.67e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 62 EQDTAKHWNQLEQWVVELQAEVACLREHKQRCERATRSLLRELLQVRARVQLQGSELRQLQQEARPA-AQAPEKEAPEFS 140
Cdd:COG1196 444 LEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVkAALLLAGLRGLA 523
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 141 GLQNQMQALDKRLVEVREALTRLRRRQVQQEAERRGAEQEAGL---RLAKLTDLLQQEEQGREVACGALQKNQEDSSRR- 216
Cdd:COG1196 524 GAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLkaaKAGRATFLPLDKIRARAALAAALARGAIGAAVDl 603
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 217 VDLEVARMQAQVTKLGEEVSLRFLKREAKLCGFLQKSFLALEKRMKASESSRLKLEGSLRGELESRwEKLRGLMEERLRA 296
Cdd:COG1196 604 VASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRE-LLAALLEAEAELE 682
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 297 LQGQHEESHLLEQCQGLDAAVAQLTKFVQQNQASLNRVLLAEEKAWDAKGRLEESRAGELAAYVQENLEAAQLAGELA-R 375
Cdd:COG1196 683 ELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPdL 762
|
330
....*....|....*....
gi 221136814 376 QEMHGELVLLREKSRALEA 394
Cdd:COG1196 763 EELERELERLEREIEALGP 781
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
41-385 |
2.67e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 44.28 E-value: 2.67e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 41 SLEELSERYESSHPTSTASVPEQDTAKhwNQLEQWVVELQAEVACLREHKQRCERATRSLLRELLQVRARVQLQGSELRQ 120
Cdd:TIGR02168 257 ELTAELQELEEKLEELRLEVSELEEEI--EELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDE 334
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 121 LQQEArpaaqapEKEAPEFSGLQNQMQALDKRLVEVREALTRLRRRQVQQEAERRGAEqeaglrlAKLTDLLQQEEQGRe 200
Cdd:TIGR02168 335 LAEEL-------AELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLR-------SKVAQLELQIASLN- 399
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 201 vacgALQKNQEDSSRRVDLEVARMQAQVTKLGEEVSLRFLKREAKLCGFLQKsflALEKRMKASESSRLKLEgSLRGELE 280
Cdd:TIGR02168 400 ----NEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEE---ELEELQEELERLEEALE-ELREELE 471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 281 SRWEKLRGLMEERLRALQGQHEESHLLEQCQGLDAAVAQLTKfvQQNQASLNRVLLAE----EKAWDAKgrLEESRAGEL 356
Cdd:TIGR02168 472 EAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLK--NQSGLSGILGVLSElisvDEGYEAA--IEAALGGRL 547
|
330 340
....*....|....*....|....*....
gi 221136814 357 AAYVQENLEAAQLAGELARQEMHGELVLL 385
Cdd:TIGR02168 548 QAVVVENLNAAKKAIAFLKQNELGRVTFL 576
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
67-545 |
3.83e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 43.95 E-value: 3.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 67 KHWNQLEQWVVELQAEVACLREHKQRCERATRSLLR--ELLQVRARVQlQGSELRQLQQEARPAAQAPEKEAPEFSGLQN 144
Cdd:pfam15921 264 QHQDRIEQLISEHEVEITGLTEKASSARSQANSIQSqlEIIQEQARNQ-NSMYMRQLSDLESTVSQLRSELREAKRMYED 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 145 QMQALDKRLVEVREALTRLRrrqvqqeAERRGAEQEAGL---RLAKLTDLLQQEEQgrevacgALQKNQEDSSRRVDLEv 221
Cdd:pfam15921 343 KIEELEKQLVLANSELTEAR-------TERDQFSQESGNlddQLQKLLADLHKREK-------ELSLEKEQNKRLWDRD- 407
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 222 armqaqvtkLGEEVSLRFLKREAKLCGFLQKSFLALEKRMKAsessrlklegslrgelesrweKLRGLMEERLRALQGQH 301
Cdd:pfam15921 408 ---------TGNSITIDHLRRELDDRNMEVQRLEALLKAMKS---------------------ECQGQMERQMAAIQGKN 457
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 302 EEshlLEQCQGLDAavaqltkfvqqnqaslnrvllaeekawdakgRLEESRagELAAYVQENLEAAQLAGELARQEMHGE 381
Cdd:pfam15921 458 ES---LEKVSSLTA-------------------------------QLESTK--EMLRKVVEELTAKKMTLESSERTVSDL 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 382 LVLLREKSRALEASVAQLAgqlkelsghlpALSSRLDLQEQML------GLRLSEAKTEWEGAERKSLEdlarwRKEVTE 455
Cdd:pfam15921 502 TASLQEKERAIEATNAEIT-----------KLRSRVDLKLQELqhlkneGDHLRNVQTECEALKLQMAE-----KDKVIE 565
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 456 HLRgvrekvdglpQQIESVSDKCLLHKSDSDlRISAEGKAREFKVGALRQELATLlssvQLLKeDNPGRKIAEMQGKLAT 535
Cdd:pfam15921 566 ILR----------QQIENMTQLVGQHGRTAG-AMQVEKAQLEKEINDRRLELQEF----KILK-DKKDAKIRELEARVSD 629
|
490
....*....|
gi 221136814 536 FQNQIMKLEN 545
Cdd:pfam15921 630 LELEKVKLVN 639
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
62-450 |
5.17e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 43.22 E-value: 5.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 62 EQDTAKHWNQLEQWVVELQAEVACLREHKQRCERAtRSLLRELLQVRARVQLQGSELRQLQQEARPAAQAPEKEApEFSG 141
Cdd:COG4717 83 AEEKEEEYAELQEELEELEEELEELEAELEELREE-LEKLEKLLQLLPLYQELEALEAELAELPERLEELEERLE-ELRE 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 142 LQNQMQALDKRLVEVREALTRLRR--------------RQVQQEAERRGAEQEAGLRLAKLTDLLQQEEQGREVACGALQ 207
Cdd:COG4717 161 LEEELEELEAELAELQEELEELLEqlslateeelqdlaEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAA 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 208 KNQEDSSRRVDLEVARMQAQVTKLGEEVSLRFLKREAKLCGFLQKSFLALEKRMKASESSRLKLEGSLRGELESRWEKLR 287
Cdd:COG4717 241 LEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEE 320
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 288 GLMEERLRALQGQHEESHLLEQCQGLDAAV------------AQLTKFVQQNQASLNRVLLAEEKAWDAKGRLEESRAGE 355
Cdd:COG4717 321 LEELLAALGLPPDLSPEELLELLDRIEELQellreaeeleeeLQLEELEQEIAALLAEAGVEDEEELRAALEQAEEYQEL 400
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 356 LAAYVQENLEAAQLAGELARQEMHGELVLLREKSRALEASVAQLAGQLKELSGHLPALSSRLDLQEQmlGLRLSEAKTEW 435
Cdd:COG4717 401 KEELEELEEQLEELLGELEELLEALDEEELEEELEELEEELEELEEELEELREELAELEAELEQLEE--DGELAELLQEL 478
|
410
....*....|....*
gi 221136814 436 EGAERKSLEDLARWR 450
Cdd:COG4717 479 EELKAELRELAEEWA 493
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
249-476 |
6.36e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 43.12 E-value: 6.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 249 FLQKSFLALEKRMKASESSRLKLEGSLRgELESRWEKLRGL---MEERLRALQG-----QHEESHLLEQCQGLDAAVAQL 320
Cdd:TIGR02168 236 ELREELEELQEELKEAEEELEELTAELQ-ELEEKLEELRLEvseLEEEIEELQKelyalANEISRLEQQKQILRERLANL 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 321 TKFVQQNQASLNRVLLAEEKAWDAKGRLEEsRAGELAAyVQENLEAAQLAGELARQEMHGELVLLREKSRALEASVAQLA 400
Cdd:TIGR02168 315 ERQLEELEAQLEELESKLDELAEELAELEE-KLEELKE-ELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLE 392
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 221136814 401 GQLKELSGHLPALSSRLDLQEQMLGLRLSEAKTEWEGAERKSLEDLARWRKEVTEHLRGVREKVDGLPQQIESVSD 476
Cdd:TIGR02168 393 LQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELRE 468
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
78-263 |
1.41e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.82 E-value: 1.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 78 ELQAEVACLREHKQRCERATRSLLRELLQVRARVQLqgseLRQLQQEARPAAQAPEKEApEFSGLQNQMQALDK---RLV 154
Cdd:COG4913 614 ALEAELAELEEELAEAEERLEALEAELDALQERREA----LQRLAEYSWDEIDVASAER-EIAELEAELERLDAssdDLA 688
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 155 EVREALTRLRRRQVQQEAERRGAEQEAGLRLAKLTDLLQQEEQGREVACGALQKNQEDssRRVDLEVARMQAQVTKLGEE 234
Cdd:COG4913 689 ALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLE--LRALLEERFAAALGDAVERE 766
|
170 180
....*....|....*....|....*....
gi 221136814 235 VSLRFLKREAKLCGFLQKSFLALEKRMKA 263
Cdd:COG4913 767 LRENLEERIDALRARLNRAEEELERAMRA 795
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
151-478 |
3.84e-03 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 40.43 E-value: 3.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 151 KRLVEVREALTRL------RRRQV---QQEAE-----RRGAEQEAGLRLAKLTDLLQQEEQGREvacgALQKNQEDSSRR 216
Cdd:TIGR02168 179 RKLERTRENLDRLedilneLERQLkslERQAEkaeryKELKAELRELELALLVLRLEELREELE----ELQEELKEAEEE 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 217 VDLEVARMQAQVTKLgEEVSLRFLKREAKLcGFLQKSFLAL---------EKRMKASESSRLKLEGSLRGELESRWEKLR 287
Cdd:TIGR02168 255 LEELTAELQELEEKL-EELRLEVSELEEEI-EELQKELYALaneisrleqQKQILRERLANLERQLEELEAQLEELESKL 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 288 GLMEERLRALQGQHEEshLLEQCQGLDaavAQLTKFVQQNQASLNRVLLAEEKAWDAKgrleesragelAAYVQENLEAA 367
Cdd:TIGR02168 333 DELAEELAELEEKLEE--LKEELESLE---AELEELEAELEELESRLEELEEQLETLR-----------SKVAQLELQIA 396
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 368 QLAGELARqemhgelvllreksraLEASVAQLAGQLKELSGHLPALSSRLDLQE-QMLGLRLSEAKTEWEGAErKSLEDL 446
Cdd:TIGR02168 397 SLNNEIER----------------LEARLERLEDRRERLQQEIEELLKKLEEAElKELQAELEELEEELEELQ-EELERL 459
|
330 340 350
....*....|....*....|....*....|..
gi 221136814 447 ARWRKEVTEHLRGVREKVDGLPQQIESVSDKC 478
Cdd:TIGR02168 460 EEALEELREELEEAEQALDAAERELAQLQARL 491
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
62-180 |
3.97e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 40.67 E-value: 3.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 62 EQDTAKHWNQLEQWVVELQAEVACLREHKQRCERATRS--------LLRELLQVRARVQLQGSELRQLQQEARPAAQAPE 133
Cdd:COG4913 297 LEELRAELARLEAELERLEARLDALREELDELEAQIRGnggdrleqLEREIERLERELEERERRRARLEALLAALGLPLP 376
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 221136814 134 KEAPEFSGLQNQMQA----LDKRLVEVREALTRLRRRQVQQEAERRGAEQE 180
Cdd:COG4913 377 ASAEEFAALRAEAAAlleaLEEELEALEEALAEAEAALRDLRRELRELEAE 427
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
78-572 |
4.02e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 40.41 E-value: 4.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 78 ELQAEVACLREHKQRCERATRSLLRELLQVRARVQLQGSELRQLQQEArpaaqapEKEAPEFSGLQNQMQALDKRLVEVR 157
Cdd:PRK02224 255 TLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEA-------GLDDADAEAVEARREELEDRDEELR 327
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 158 EALTRLRRRQVQQEAERRGAEQEAglrlaklTDLLQQEEQGREVAcGALQKNQEDSSRRVDlEVARMQAQVTKLGEEVSL 237
Cdd:PRK02224 328 DRLEECRVAAQAHNEEAESLREDA-------DDLEERAEELREEA-AELESELEEAREAVE-DRREEIEELEEEIEELRE 398
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 238 RFLKREAKLCGFLQKSFLALEKRMKASEsSRLKLEGSLRgELESRWEKLRGLMEERLRALQGQ--HEESHL--LEQCQG- 312
Cdd:PRK02224 399 RFGDAPVDLGNAEDFLEELREERDELRE-REAELEATLR-TARERVEEAEALLEAGKCPECGQpvEGSPHVetIEEDREr 476
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 313 ---LDAAVAQLTKFVQQNQASLNRVLLAEEKAwDAKGRLEESR--AGELAAYVQENLEAAQLAGELAR---QEMHGELVL 384
Cdd:PRK02224 477 veeLEAELEDLEEEVEEVEERLERAEDLVEAE-DRIERLEERRedLEELIAERRETIEEKRERAEELReraAELEAEAEE 555
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 385 LREKSRALEASVAQLAGQLKELSGHLPALSSRLD-LQEQMLGLRLSEAKTEWEGAERKSLEDLARWRKEVTEHLRGVREK 463
Cdd:PRK02224 556 KREAAAEAEEEAEEAREEVAELNSKLAELKERIEsLERIRTLLAAIADAEDEIERLREKREALAELNDERRERLAEKRER 635
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 464 VDglpqQIESVSDKCLLHKSDSDLRISAEGKAR-EFKVGALRQELATLLSSVQLLKedNPGRKIAEMQGKLATFQNQIMK 542
Cdd:PRK02224 636 KR----ELEAEFDEARIEEAREDKERAEEYLEQvEEKLDELREERDDLQAEIGAVE--NELEELEELRERREALENRVEA 709
|
490 500 510
....*....|....*....|....*....|
gi 221136814 543 LENCVQANKTIQNLRFNTEARLRTQEMATL 572
Cdd:PRK02224 710 LEALYDEAEELESMYGDLRAELRQRNVETL 739
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
71-303 |
4.48e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 40.28 E-value: 4.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 71 QLEQWVVELQAEVACLREHKQRCERATRS--LLRELLQVRARVQLQGSELRQLQQEARPAAqaPEKEAPEFSGLQNQMQA 148
Cdd:COG4913 222 DTFEAADALVEHFDDLERAHEALEDAREQieLLEPIRELAERYAAARERLAELEYLRAALR--LWFAQRRLELLEAELEE 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221136814 149 LDKRLVEVREALTRLRRRQVQQEAERRGAEQEaglrlakltdlLQQEEQGREVACGALQKNQEDSSRRVDLEVARMQAQV 228
Cdd:COG4913 300 LRAELARLEAELERLEARLDALREELDELEAQ-----------IRGNGGDRLEQLEREIERLERELEERERRRARLEALL 368
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 221136814 229 TKLGEEVSLRflkreaklcgflQKSFLALEKRMKAsessRLKLEGSLRGELESRWEKLRGlmeeRLRALQGQHEE 303
Cdd:COG4913 369 AALGLPLPAS------------AEEFAALRAEAAA----LLEALEEELEALEEALAEAEA----ALRDLRRELRE 423
|
|
| |
