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integrator complex subunit 14 isoform 4 [Homo sapiens]
List of domain hits
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Name | Accession | Description | Interval | E-value | |||
IntS14_b-barrel | pfam19435 | Integrator complex subunit 14, beta-barrel domain; This entry represents the central ... |
160-306 | 1.07e-93 | |||
Integrator complex subunit 14, beta-barrel domain; This entry represents the central beta-barrel domain of Integrator complex subunit 14 (IntS14), a component of the integrator complex which is involved in the transcription of small nuclear RNAs (snRNA) and their 3'-box-dependent processing. This complex is also involved in the 3'-end processing of the U7 snRNA, and the spliceosomal snRNAs U1 and U5. IntS14 interacts with IntS13, both of them consist of an N-terminal von-Willebrand type A like domain (VWA), followed by a central beta-barrel domain and a C-terminal alpha-helical domain connected through a linker. The interface involves all domains of both proteins, both beta-barrel domains form the centre of the complex and contribute to the major contact between Ints13-IntS14. : Pssm-ID: 466081 Cd Length: 147 Bit Score: 279.92 E-value: 1.07e-93
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IntS14_C | pfam20504 | Integrator complex subunit 14, alpha-helical domain; This entry represents the C-terminal ... |
355-462 | 1.89e-67 | |||
Integrator complex subunit 14, alpha-helical domain; This entry represents the C-terminal alpha-helical domain of Integrator complex subunit 14 (IntS14), a component of the integrator complex which is involved in the transcription of small nuclear RNAs (snRNA) and their 3'-box dependent processing. This complex is also involved in the 3'-end processing of the U7 snRNA, and the spliceosomal snRNAs U1 and U5. IntS14 interacts with IntS13; both of them consist of an N-terminal VWA domain followed by a central beta-barrel domain and a C-terminal alpha-helical domain, which are connected through a linker devoid of secondary structure elements. This domain contribute to binding by packing against the beta-barrel of IntS13. : Pssm-ID: 466653 Cd Length: 103 Bit Score: 211.03 E-value: 1.89e-67
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Name | Accession | Description | Interval | E-value | |||
IntS14_b-barrel | pfam19435 | Integrator complex subunit 14, beta-barrel domain; This entry represents the central ... |
160-306 | 1.07e-93 | |||
Integrator complex subunit 14, beta-barrel domain; This entry represents the central beta-barrel domain of Integrator complex subunit 14 (IntS14), a component of the integrator complex which is involved in the transcription of small nuclear RNAs (snRNA) and their 3'-box-dependent processing. This complex is also involved in the 3'-end processing of the U7 snRNA, and the spliceosomal snRNAs U1 and U5. IntS14 interacts with IntS13, both of them consist of an N-terminal von-Willebrand type A like domain (VWA), followed by a central beta-barrel domain and a C-terminal alpha-helical domain connected through a linker. The interface involves all domains of both proteins, both beta-barrel domains form the centre of the complex and contribute to the major contact between Ints13-IntS14. Pssm-ID: 466081 Cd Length: 147 Bit Score: 279.92 E-value: 1.07e-93
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IntS14_C | pfam20504 | Integrator complex subunit 14, alpha-helical domain; This entry represents the C-terminal ... |
355-462 | 1.89e-67 | |||
Integrator complex subunit 14, alpha-helical domain; This entry represents the C-terminal alpha-helical domain of Integrator complex subunit 14 (IntS14), a component of the integrator complex which is involved in the transcription of small nuclear RNAs (snRNA) and their 3'-box dependent processing. This complex is also involved in the 3'-end processing of the U7 snRNA, and the spliceosomal snRNAs U1 and U5. IntS14 interacts with IntS13; both of them consist of an N-terminal VWA domain followed by a central beta-barrel domain and a C-terminal alpha-helical domain, which are connected through a linker devoid of secondary structure elements. This domain contribute to binding by packing against the beta-barrel of IntS13. Pssm-ID: 466653 Cd Length: 103 Bit Score: 211.03 E-value: 1.89e-67
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idnK | PRK09825 | gluconokinase; |
315-439 | 6.54e-04 | |||
gluconokinase; Pssm-ID: 182097 Cd Length: 176 Bit Score: 40.39 E-value: 6.54e-04
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Name | Accession | Description | Interval | E-value | |||
IntS14_b-barrel | pfam19435 | Integrator complex subunit 14, beta-barrel domain; This entry represents the central ... |
160-306 | 1.07e-93 | |||
Integrator complex subunit 14, beta-barrel domain; This entry represents the central beta-barrel domain of Integrator complex subunit 14 (IntS14), a component of the integrator complex which is involved in the transcription of small nuclear RNAs (snRNA) and their 3'-box-dependent processing. This complex is also involved in the 3'-end processing of the U7 snRNA, and the spliceosomal snRNAs U1 and U5. IntS14 interacts with IntS13, both of them consist of an N-terminal von-Willebrand type A like domain (VWA), followed by a central beta-barrel domain and a C-terminal alpha-helical domain connected through a linker. The interface involves all domains of both proteins, both beta-barrel domains form the centre of the complex and contribute to the major contact between Ints13-IntS14. Pssm-ID: 466081 Cd Length: 147 Bit Score: 279.92 E-value: 1.07e-93
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IntS14_C | pfam20504 | Integrator complex subunit 14, alpha-helical domain; This entry represents the C-terminal ... |
355-462 | 1.89e-67 | |||
Integrator complex subunit 14, alpha-helical domain; This entry represents the C-terminal alpha-helical domain of Integrator complex subunit 14 (IntS14), a component of the integrator complex which is involved in the transcription of small nuclear RNAs (snRNA) and their 3'-box dependent processing. This complex is also involved in the 3'-end processing of the U7 snRNA, and the spliceosomal snRNAs U1 and U5. IntS14 interacts with IntS13; both of them consist of an N-terminal VWA domain followed by a central beta-barrel domain and a C-terminal alpha-helical domain, which are connected through a linker devoid of secondary structure elements. This domain contribute to binding by packing against the beta-barrel of IntS13. Pssm-ID: 466653 Cd Length: 103 Bit Score: 211.03 E-value: 1.89e-67
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idnK | PRK09825 | gluconokinase; |
315-439 | 6.54e-04 | |||
gluconokinase; Pssm-ID: 182097 Cd Length: 176 Bit Score: 40.39 E-value: 6.54e-04
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Blast search parameters | ||||
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