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Conserved domains on  [gi|344217706|ref|NP_001230684|]
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cell cycle regulator of non-homologous end joining isoform 3 [Homo sapiens]

Protein Classification

MRI domain-containing protein( domain architecture ID 12173091)

MRI domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
MRI pfam15325
Modulator of retrovirus infection; MRI, or modulator of retrovirus infection, is a family of ...
 1-102 1.39e-46

Modulator of retrovirus infection; MRI, or modulator of retrovirus infection, is a family of eukaryotic proteins that regulate the activity of the proteasome in the uncoating of retroviruses.


:

Pssm-ID: 434635  Cd Length: 100  Bit Score: 144.55  E-value: 1.39e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344217706    1 MNEAEIVDVALGILIESRKQEKACEQPALAGADNPEHSPPCSVSPHTSSGSSSEEEDSGKQALAPGLSPSQRPGGSSSAC 80
Cdd:pfam15325   1 MNEAELVDVALGILIEGRKQEKPLEQPALAGADKPELSPTCSESPHTSSGSSSEEEDSGKDAPPPGLSPSQGPGGSDSAC 80

                          90       100
                  ....*....|....*....|..
gi 344217706   81 SRSPeeEEEEDVLKYVREIFFS 102
Cdd:pfam15325  81 SRSP--EEEEDVLKYVREIFFS 100
 
Name Accession Description Interval E-value
MRI pfam15325
Modulator of retrovirus infection; MRI, or modulator of retrovirus infection, is a family of ...
 1-102 1.39e-46

Modulator of retrovirus infection; MRI, or modulator of retrovirus infection, is a family of eukaryotic proteins that regulate the activity of the proteasome in the uncoating of retroviruses.


Pssm-ID: 434635  Cd Length: 100  Bit Score: 144.55  E-value: 1.39e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344217706    1 MNEAEIVDVALGILIESRKQEKACEQPALAGADNPEHSPPCSVSPHTSSGSSSEEEDSGKQALAPGLSPSQRPGGSSSAC 80
Cdd:pfam15325   1 MNEAELVDVALGILIEGRKQEKPLEQPALAGADKPELSPTCSESPHTSSGSSSEEEDSGKDAPPPGLSPSQGPGGSDSAC 80

                          90       100
                  ....*....|....*....|..
gi 344217706   81 SRSPeeEEEEDVLKYVREIFFS 102
Cdd:pfam15325  81 SRSP--EEEEDVLKYVREIFFS 100
 
Name Accession Description Interval E-value
MRI pfam15325
Modulator of retrovirus infection; MRI, or modulator of retrovirus infection, is a family of ...
 1-102 1.39e-46

Modulator of retrovirus infection; MRI, or modulator of retrovirus infection, is a family of eukaryotic proteins that regulate the activity of the proteasome in the uncoating of retroviruses.


Pssm-ID: 434635  Cd Length: 100  Bit Score: 144.55  E-value: 1.39e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344217706    1 MNEAEIVDVALGILIESRKQEKACEQPALAGADNPEHSPPCSVSPHTSSGSSSEEEDSGKQALAPGLSPSQRPGGSSSAC 80
Cdd:pfam15325   1 MNEAELVDVALGILIEGRKQEKPLEQPALAGADKPELSPTCSESPHTSSGSSSEEEDSGKDAPPPGLSPSQGPGGSDSAC 80

                          90       100
                  ....*....|....*....|..
gi 344217706   81 SRSPeeEEEEDVLKYVREIFFS 102
Cdd:pfam15325  81 SRSP--EEEEDVLKYVREIFFS 100
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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