|
Name |
Accession |
Description |
Interval |
E-value |
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
755-822 |
7.74e-21 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
:
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 87.09 E-value: 7.74e-21
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 476007878 755 DQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSL 822
Cdd:pfam06758 1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
924-991 |
7.74e-21 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
:
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 87.09 E-value: 7.74e-21
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 476007878 924 DQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSL 991
Cdd:pfam06758 1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
1024-1085 |
7.04e-19 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
:
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 81.70 E-value: 7.04e-19
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 476007878 1024 DQNPPCPRLNGVLMEVEEPEVLQDSLDGCYSTPSMYFELPDSFQHYRSVFYSFEEQHISFAL 1085
Cdd:pfam06758 7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
680-747 |
1.57e-16 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
:
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 74.77 E-value: 1.57e-16
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 476007878 680 YQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLGRWYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLAL 747
Cdd:pfam06758 1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
605-671 |
2.79e-16 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
:
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 74.38 E-value: 2.79e-16
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 476007878 605 DQVKKEDQEATGPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLA 671
Cdd:pfam06758 1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
856-916 |
2.79e-16 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
:
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 74.38 E-value: 2.79e-16
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 476007878 856 QNPPCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLAL 916
Cdd:pfam06758 8 QEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
448-511 |
3.02e-14 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
:
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 68.60 E-value: 3.02e-14
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 476007878 448 EVAEKVQKSSAP---REMQKAEEKEVPEDSLEECAITYSNSHGPYDSNQPHRKTKITFEEDKVDSTL 511
Cdd:pfam06758 2 EEEEEDQEPLAPrlsRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
181-240 |
1.02e-09 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
:
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 55.51 E-value: 1.02e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 476007878 181 KVLESSAP---REVQKAEESKVAEDSLEECAITCSNSHGPCDSNQPHKNIKITFEEDEVNSTL 240
Cdd:pfam06758 6 EDQEPLAPrlsRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
542-596 |
4.92e-07 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
:
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 48.19 E-value: 4.92e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 476007878 542 PVSPRNLQESEEEEVPQESWDEGYSTPSIPPEMLASYKSYSSTFHSLEEQQVCMA 596
Cdd:pfam06758 13 PRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
|
|
| PTZ00121 super family |
cl31754 |
MAEBL; Provisional |
53-473 |
1.38e-03 |
|
MAEBL; Provisional
The actual alignment was detected with superfamily member PTZ00121:
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 43.21 E-value: 1.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 476007878 53 NRQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLVHSQE-RELTQLKEKLREGRDASRSLNEHLQALL 131
Cdd:PTZ00121 1250 NNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEkKKADEAKKKAEEAKKADEAKKKAEEAKK 1329
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 476007878 132 TPDEPdKSQGQDLQEQLAEGCRLAQHLVQKLSPENDEDEDEDVQVEEDEKVLESSAPR--EVQKAEES-KVAEDSLEECA 208
Cdd:PTZ00121 1330 KADAA-KKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKaeEKKKADEAkKKAEEDKKKAD 1408
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 476007878 209 ITCSNSHGPCDSNQPHKNIKITFEEDEVNSTLVVDRESSH-----DECQDALNILPVPGPTSSATNVSMVVSAGPLSSE- 282
Cdd:PTZ00121 1409 ELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEakkkaEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEa 1488
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 476007878 283 --KAEMNILEINEKLRPQLAEKK-QQFRNLKEKcfltQLAGFLANQQNKYKYEECKDlikfmLRNERQFKEEKLAEQLKQ 359
Cdd:PTZ00121 1489 kkKAEEAKKKADEAKKAAEAKKKaDEAKKAEEA----KKADEAKKAEEAKKADEAKK-----AEEKKKADELKKAEELKK 1559
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 476007878 360 AEELRQYKVLVHAQERELTQLReKLREGRDASRSLNEHLQALLTPDEPDKSQGQDLQEQL---AEGCRLAQHLVQKLSPE 436
Cdd:PTZ00121 1560 AEEKKKAEEAKKAEEDKNMALR-KAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAkikAEELKKAEEEKKKVEQL 1638
|
410 420 430
....*....|....*....|....*....|....*..
gi 476007878 437 NDNDDDedvQIEVAEKVQKSSAPREMQKAEEKEVPED 473
Cdd:PTZ00121 1639 KKKEAE---EKKKAEELKKAEEENKIKAAEEAKKAEE 1672
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
755-822 |
7.74e-21 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 87.09 E-value: 7.74e-21
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 476007878 755 DQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSL 822
Cdd:pfam06758 1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
924-991 |
7.74e-21 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 87.09 E-value: 7.74e-21
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 476007878 924 DQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSL 991
Cdd:pfam06758 1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
1024-1085 |
7.04e-19 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 81.70 E-value: 7.04e-19
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 476007878 1024 DQNPPCPRLNGVLMEVEEPEVLQDSLDGCYSTPSMYFELPDSFQHYRSVFYSFEEQHISFAL 1085
Cdd:pfam06758 7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
680-747 |
1.57e-16 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 74.77 E-value: 1.57e-16
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 476007878 680 YQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLGRWYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLAL 747
Cdd:pfam06758 1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
605-671 |
2.79e-16 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 74.38 E-value: 2.79e-16
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 476007878 605 DQVKKEDQEATGPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLA 671
Cdd:pfam06758 1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
856-916 |
2.79e-16 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 74.38 E-value: 2.79e-16
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 476007878 856 QNPPCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLAL 916
Cdd:pfam06758 8 QEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
448-511 |
3.02e-14 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 68.60 E-value: 3.02e-14
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 476007878 448 EVAEKVQKSSAP---REMQKAEEKEVPEDSLEECAITYSNSHGPYDSNQPHRKTKITFEEDKVDSTL 511
Cdd:pfam06758 2 EEEEEDQEPLAPrlsRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
181-240 |
1.02e-09 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 55.51 E-value: 1.02e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 476007878 181 KVLESSAP---REVQKAEESKVAEDSLEECAITCSNSHGPCDSNQPHKNIKITFEEDEVNSTL 240
Cdd:pfam06758 6 EDQEPLAPrlsRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
542-596 |
4.92e-07 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 48.19 E-value: 4.92e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 476007878 542 PVSPRNLQESEEEEVPQESWDEGYSTPSIPPEMLASYKSYSSTFHSLEEQQVCMA 596
Cdd:pfam06758 13 PRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
53-473 |
1.38e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 43.21 E-value: 1.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 476007878 53 NRQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLVHSQE-RELTQLKEKLREGRDASRSLNEHLQALL 131
Cdd:PTZ00121 1250 NNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEkKKADEAKKKAEEAKKADEAKKKAEEAKK 1329
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 476007878 132 TPDEPdKSQGQDLQEQLAEGCRLAQHLVQKLSPENDEDEDEDVQVEEDEKVLESSAPR--EVQKAEES-KVAEDSLEECA 208
Cdd:PTZ00121 1330 KADAA-KKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKaeEKKKADEAkKKAEEDKKKAD 1408
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 476007878 209 ITCSNSHGPCDSNQPHKNIKITFEEDEVNSTLVVDRESSH-----DECQDALNILPVPGPTSSATNVSMVVSAGPLSSE- 282
Cdd:PTZ00121 1409 ELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEakkkaEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEa 1488
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 476007878 283 --KAEMNILEINEKLRPQLAEKK-QQFRNLKEKcfltQLAGFLANQQNKYKYEECKDlikfmLRNERQFKEEKLAEQLKQ 359
Cdd:PTZ00121 1489 kkKAEEAKKKADEAKKAAEAKKKaDEAKKAEEA----KKADEAKKAEEAKKADEAKK-----AEEKKKADELKKAEELKK 1559
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 476007878 360 AEELRQYKVLVHAQERELTQLReKLREGRDASRSLNEHLQALLTPDEPDKSQGQDLQEQL---AEGCRLAQHLVQKLSPE 436
Cdd:PTZ00121 1560 AEEKKKAEEAKKAEEDKNMALR-KAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAkikAEELKKAEEEKKKVEQL 1638
|
410 420 430
....*....|....*....|....*....|....*..
gi 476007878 437 NDNDDDedvQIEVAEKVQKSSAPREMQKAEEKEVPED 473
Cdd:PTZ00121 1639 KKKEAE---EKKKAEELKKAEEENKIKAAEEAKKAEE 1672
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
52-421 |
2.59e-03 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 41.97 E-value: 2.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 476007878 52 ANRQKKYKyEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQykvLVHSQERELTQLKEKLREGRDASRSLNEHLQALl 131
Cdd:TIGR02168 212 AERYKELK-AELRELELALLVLRLEELREELEELQEELKEAEE---ELEELTAELQELEEKLEELRLEVSELEEEIEEL- 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 476007878 132 tpdepdksQG--QDLQEQLAEGCRLAQHLVQKLSPENDEDEDEDVQVEEDEKVLESSAPREVQKAEESKVAEDSLEECAI 209
Cdd:TIGR02168 287 --------QKelYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEA 358
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 476007878 210 tcsnshgpcdsnqphknikitfEEDEVNSTLvVDRESSHDECQDALNilpvpgptssatnvsmvvsagPLSSEKAEmnil 289
Cdd:TIGR02168 359 ----------------------ELEELEAEL-EELESRLEELEEQLE---------------------TLRSKVAQ---- 390
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 476007878 290 einekLRPQLAEKKQQFRNLKEKcfLTQLAGFLANQQnkykyEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVL 369
Cdd:TIGR02168 391 -----LELQIASLNNEIERLEAR--LERLEDRRERLQ-----QEIEELLKKLEEAELKELQAELEELEEELEELQEELER 458
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 476007878 370 VHAQERELTQLREKLREGRDASRSLNEHLQALLTPDEPDKSQGQDLQEQLAE 421
Cdd:TIGR02168 459 LEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKA 510
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
755-822 |
7.74e-21 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 87.09 E-value: 7.74e-21
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 476007878 755 DQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSL 822
Cdd:pfam06758 1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
924-991 |
7.74e-21 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 87.09 E-value: 7.74e-21
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 476007878 924 DQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSL 991
Cdd:pfam06758 1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
1024-1085 |
7.04e-19 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 81.70 E-value: 7.04e-19
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 476007878 1024 DQNPPCPRLNGVLMEVEEPEVLQDSLDGCYSTPSMYFELPDSFQHYRSVFYSFEEQHISFAL 1085
Cdd:pfam06758 7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
680-747 |
1.57e-16 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 74.77 E-value: 1.57e-16
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 476007878 680 YQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLGRWYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLAL 747
Cdd:pfam06758 1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
605-671 |
2.79e-16 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 74.38 E-value: 2.79e-16
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 476007878 605 DQVKKEDQEATGPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLA 671
Cdd:pfam06758 1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
856-916 |
2.79e-16 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 74.38 E-value: 2.79e-16
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 476007878 856 QNPPCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLAL 916
Cdd:pfam06758 8 QEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
448-511 |
3.02e-14 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 68.60 E-value: 3.02e-14
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 476007878 448 EVAEKVQKSSAP---REMQKAEEKEVPEDSLEECAITYSNSHGPYDSNQPHRKTKITFEEDKVDSTL 511
Cdd:pfam06758 2 EEEEEDQEPLAPrlsRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
181-240 |
1.02e-09 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 55.51 E-value: 1.02e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 476007878 181 KVLESSAP---REVQKAEESKVAEDSLEECAITCSNSHGPCDSNQPHKNIKITFEEDEVNSTL 240
Cdd:pfam06758 6 EDQEPLAPrlsRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
542-596 |
4.92e-07 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 48.19 E-value: 4.92e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 476007878 542 PVSPRNLQESEEEEVPQESWDEGYSTPSIPPEMLASYKSYSSTFHSLEEQQVCMA 596
Cdd:pfam06758 13 PRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
53-473 |
1.38e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 43.21 E-value: 1.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 476007878 53 NRQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLVHSQE-RELTQLKEKLREGRDASRSLNEHLQALL 131
Cdd:PTZ00121 1250 NNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEkKKADEAKKKAEEAKKADEAKKKAEEAKK 1329
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 476007878 132 TPDEPdKSQGQDLQEQLAEGCRLAQHLVQKLSPENDEDEDEDVQVEEDEKVLESSAPR--EVQKAEES-KVAEDSLEECA 208
Cdd:PTZ00121 1330 KADAA-KKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKaeEKKKADEAkKKAEEDKKKAD 1408
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 476007878 209 ITCSNSHGPCDSNQPHKNIKITFEEDEVNSTLVVDRESSH-----DECQDALNILPVPGPTSSATNVSMVVSAGPLSSE- 282
Cdd:PTZ00121 1409 ELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEakkkaEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEa 1488
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 476007878 283 --KAEMNILEINEKLRPQLAEKK-QQFRNLKEKcfltQLAGFLANQQNKYKYEECKDlikfmLRNERQFKEEKLAEQLKQ 359
Cdd:PTZ00121 1489 kkKAEEAKKKADEAKKAAEAKKKaDEAKKAEEA----KKADEAKKAEEAKKADEAKK-----AEEKKKADELKKAEELKK 1559
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 476007878 360 AEELRQYKVLVHAQERELTQLReKLREGRDASRSLNEHLQALLTPDEPDKSQGQDLQEQL---AEGCRLAQHLVQKLSPE 436
Cdd:PTZ00121 1560 AEEKKKAEEAKKAEEDKNMALR-KAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAkikAEELKKAEEEKKKVEQL 1638
|
410 420 430
....*....|....*....|....*....|....*..
gi 476007878 437 NDNDDDedvQIEVAEKVQKSSAPREMQKAEEKEVPED 473
Cdd:PTZ00121 1639 KKKEAE---EKKKAEELKKAEEENKIKAAEEAKKAEE 1672
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
52-421 |
2.59e-03 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 41.97 E-value: 2.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 476007878 52 ANRQKKYKyEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQykvLVHSQERELTQLKEKLREGRDASRSLNEHLQALl 131
Cdd:TIGR02168 212 AERYKELK-AELRELELALLVLRLEELREELEELQEELKEAEE---ELEELTAELQELEEKLEELRLEVSELEEEIEEL- 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 476007878 132 tpdepdksQG--QDLQEQLAEGCRLAQHLVQKLSPENDEDEDEDVQVEEDEKVLESSAPREVQKAEESKVAEDSLEECAI 209
Cdd:TIGR02168 287 --------QKelYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEA 358
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 476007878 210 tcsnshgpcdsnqphknikitfEEDEVNSTLvVDRESSHDECQDALNilpvpgptssatnvsmvvsagPLSSEKAEmnil 289
Cdd:TIGR02168 359 ----------------------ELEELEAEL-EELESRLEELEEQLE---------------------TLRSKVAQ---- 390
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 476007878 290 einekLRPQLAEKKQQFRNLKEKcfLTQLAGFLANQQnkykyEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVL 369
Cdd:TIGR02168 391 -----LELQIASLNNEIERLEAR--LERLEDRRERLQ-----QEIEELLKKLEEAELKELQAELEELEEELEELQEELER 458
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 476007878 370 VHAQERELTQLREKLREGRDASRSLNEHLQALLTPDEPDKSQGQDLQEQLAE 421
Cdd:TIGR02168 459 LEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKA 510
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
57-463 |
7.56e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 40.51 E-value: 7.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 476007878 57 KYKYEECKDLIKFMLRNERQFKEEKL---AEQLKQAEELRQYKvlvhSQERELTQLKEKLREGRDASRSLNEHLQALLTP 133
Cdd:PTZ00121 1437 KKKAEEAKKADEAKKKAEEAKKAEEAkkkAEEAKKADEAKKKA----EEAKKADEAKKKAEEAKKKADEAKKAAEAKKKA 1512
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 476007878 134 DEPDKSQGQDLQEQL--AEGCRLAQHLvqklspendedededVQVEEDEKVLESSAPREVQKAEESKVAEDSLEECAitc 211
Cdd:PTZ00121 1513 DEAKKAEEAKKADEAkkAEEAKKADEA---------------KKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEE--- 1574
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 476007878 212 snshgpcDSNQPHKNIKIT--FEEDEVNSTLVVDRESSHDECQDAlnilpvpgptssATNVSMVVSAGPLSSEKAEMNIL 289
Cdd:PTZ00121 1575 -------DKNMALRKAEEAkkAEEARIEEVMKLYEEEKKMKAEEA------------KKAEEAKIKAEELKKAEEEKKKV 1635
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 476007878 290 EINEKLRPQLAEKKQQFRNLKEKCFLTQLAGFLANQQNKYKYEECKDLIKFMLRNERQFKEEklAEQLKQAEELRQykvl 369
Cdd:PTZ00121 1636 EQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKE--AEEAKKAEELKK---- 1709
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 476007878 370 vhaQERELTQLREKLREGRDASRSLNEHLQallTPDEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDNDDDEDVQIEv 449
Cdd:PTZ00121 1710 ---KEAEEKKKAEELKKAEEENKIKAEEAK---KEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIE- 1782
|
410
....*....|....
gi 476007878 450 aEKVQKSSAPREMQ 463
Cdd:PTZ00121 1783 -EELDEEDEKRRME 1795
|
|
| |
