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Conserved domains on  [gi|525314131|ref|NP_001266211|]
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delta1 precursor [Amphimedon queenslandica]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DSL super family cl19567
Delta serrate ligand; This family has been redefined to correspond to the EGF-like domain ...
 176-215 1.02e-07

Delta serrate ligand; This family has been redefined to correspond to the EGF-like domain defined by structure.


The actual alignment was detected with superfamily member pfam01414:

Pssm-ID: 473190  Cd Length: 46  Bit Score: 48.39  E-value: 1.02e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 525314131  176 CSNDYYGTTCSLYCKAYNDsTNGHYTCNSAGQKTCLAGYT 215
Cdd:pfam01414   1 CDENYYGSTCSKFCRPRDD-KFGHYTCDANGNKVCLPGWT 39
 
Name Accession Description Interval E-value
DSL pfam01414
Delta serrate ligand; This family has been redefined to correspond to the EGF-like domain ...
 176-215 1.02e-07

Delta serrate ligand; This family has been redefined to correspond to the EGF-like domain defined by structure.


Pssm-ID: 460202  Cd Length: 46  Bit Score: 48.39  E-value: 1.02e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 525314131  176 CSNDYYGTTCSLYCKAYNDsTNGHYTCNSAGQKTCLAGYT 215
Cdd:pfam01414   1 CDENYYGSTCSKFCRPRDD-KFGHYTCDANGNKVCLPGWT 39
DSL smart00051
delta serrate ligand;
165-215 2.80e-06

delta serrate ligand;


Pssm-ID: 128366  Cd Length: 63  Bit Score: 44.63  E-value: 2.80e-06
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|.
gi 525314131   165 FVSLHYNITyiCSNDYYGTTCSLYCKAyNDSTNGHYTCNSAGQKTCLAGYT 215
Cdd:smart00051  12 FLEYQIRVT--CDENYYGEGCNKFCRP-RDDFFGHYTCDENGNKGCLEGWM 59
 
Name Accession Description Interval E-value
DSL pfam01414
Delta serrate ligand; This family has been redefined to correspond to the EGF-like domain ...
 176-215 1.02e-07

Delta serrate ligand; This family has been redefined to correspond to the EGF-like domain defined by structure.


Pssm-ID: 460202  Cd Length: 46  Bit Score: 48.39  E-value: 1.02e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 525314131  176 CSNDYYGTTCSLYCKAYNDsTNGHYTCNSAGQKTCLAGYT 215
Cdd:pfam01414   1 CDENYYGSTCSKFCRPRDD-KFGHYTCDANGNKVCLPGWT 39
DSL smart00051
delta serrate ligand;
165-215 2.80e-06

delta serrate ligand;


Pssm-ID: 128366  Cd Length: 63  Bit Score: 44.63  E-value: 2.80e-06
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|.
gi 525314131   165 FVSLHYNITyiCSNDYYGTTCSLYCKAyNDSTNGHYTCNSAGQKTCLAGYT 215
Cdd:smart00051  12 FLEYQIRVT--CDENYYGEGCNKFCRP-RDDFFGHYTCDENGNKGCLEGWM 59
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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