|
Name |
Accession |
Description |
Interval |
E-value |
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
348-1132 |
7.40e-38 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 154.56 E-value: 7.40e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 348 MEELQKKLDEEVKKRQKLEPSRVGLERQLEEKAEECHRLQELLERRKGEVQQSSKELQNMKLLLGQEEGLRHG------- 420
Cdd:pfam01576 189 ISDLEERLKKEEKGRQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNalkkire 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 421 LEAQVKELQLKLKHSQSPDSGKESLLKDL---LDTRELLEELLEGKQRVEEQLRL-RERELTALKGALKEEVASHDQEVE 496
Cdd:pfam01576 269 LEAQISELQEDLESERAARNKAEKQRRDLgeeLEALKTELEDTLDTTAAQQELRSkREQEVTELKKALEEETRSHEAQLQ 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 497 HVRLQY-------QRDTEQLRRSMQDATQDHAALEAE---------------------RQKMSSLVRELQRELEETSEET 548
Cdd:pfam01576 349 EMRQKHtqaleelTEQLEQAKRNKANLEKAKQALESEnaelqaelrtlqqakqdsehkRKKLEGQLQELQARLSESERQR 428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 549 GHWQSMFQKNKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQARASTRDTHQVEELKKELRRTQGELKELQAEQ 628
Cdd:pfam01576 429 AELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEE 508
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 629 QNQEVTGRHQNQVLEKQLAALR-------------EEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLG 695
Cdd:pfam01576 509 EEAKRNVERQLSTLQAQLSDMKkkleedagtlealEEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLLVD 588
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 696 Q-RRATVETTLRETQEEND-------------------------EFRRRILGLEQQLKEARGLAEGGEAVEARLR----- 744
Cdd:pfam01576 589 LdHQRQLVSNLEKKQKKFDqmlaeekaisaryaeerdraeaearEKETRALSLARALEEALEAKEELERTNKQLRaemed 668
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 745 ---------DKVHRLEVEKQQLEEALNAAREE------------------EGNLAAAK----RALEVRLDEAQRGLARLG 793
Cdd:pfam01576 669 lvsskddvgKNVHELERSKRALEQQVEEMKTQleeledelqatedaklrlEVNMQALKaqfeRDLQARDEQGEEKRRQLV 748
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 794 QEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDsklaLQQLQAQMEDYKekarKEVADAQRQ 873
Cdd:pfam01576 749 KQVRELEAELEDERKQRAQAVAAKKKLELDLKELEAQIDAANKGREEAVKQ----LKKLQAQMKDLQ----RELEEARAS 820
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 874 AKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGleqEAENKKRFQDDKARqlksLEEKVSR 953
Cdd:pfam01576 821 RDEILAQSKESEKKLKNLEAELLQLQEDLAASERARRQAQQERDELADEIAS---GASGKSALQDEKRR----LEARIAQ 893
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 954 LEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGF--QKPSASLSQLE 1031
Cdd:pfam01576 894 LEEELEEEQSNTELLNDRLRKSTLQVEQLTTELAAERSTSQKSESARQQLERQNKELKAKLQEMEGTvkSKFKSSIAALE 973
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1032 SQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQH---VNDQKDQLTLRVKALKRQVDEAEEEIERLDSLR 1108
Cdd:pfam01576 974 AKIAQLEEQLEQESRERQAANKLVRRTEKKLKEVLLQVEDERRHadqYKDQAEKGNSRMKQLKRQLEEAEEEASRANAAR 1053
|
890 900
....*....|....*....|....
gi 1614229687 1109 KKAQRELEEQHEVNEQLQARIKSL 1132
Cdd:pfam01576 1054 RKLQRELDDATESNESMNREVSTL 1077
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
555-1135 |
1.10e-22 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 105.40 E-value: 1.10e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 555 FQKNKEELRATKQELLQLR-MEKEEMEEELGEKMEVLQRDLEQARASTR-DTHQVEELKKELRRTQGELKELQAEQQNQE 632
Cdd:COG1196 215 YRELKEELKELEAELLLLKlRELEAELEELEAELEELEAELEELEAELAeLEAELEELRLELEELELELEEAQAEEYELL 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 633 vtgrhqnQVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRATVETTLRETQEEN 712
Cdd:COG1196 295 -------AELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEAL 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 713 DEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARL 792
Cdd:COG1196 368 LEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEA 447
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 793 GQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEqigddsklALQQLQAQMEDYkEKARKEVADAQR 872
Cdd:COG1196 448 AEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLL--------LLLEAEADYEGF-LEGVKAALLLAG 518
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 873 QAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTArldkelLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVS 952
Cdd:COG1196 519 LRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEV------AAAAIEYLKAAKAGRATFLPLDKIRARAALAAAL 592
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 953 RLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKPSASLSQLES 1032
Cdd:COG1196 593 ARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLA 672
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1033 QNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQ 1112
Cdd:COG1196 673 ALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEA 752
|
570 580
....*....|....*....|...
gi 1614229687 1113 RELEEQHEVNEQLQARIKSLEKD 1135
Cdd:COG1196 753 LEELPEPPDLEELERELERLERE 775
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
462-1133 |
9.94e-22 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 102.44 E-value: 9.94e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 462 GKQRVEEQLRLRERELTALKGALKEEVASHDqEVEHVRLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQREL 541
Cdd:TIGR02168 240 ELEELQEELKEAEEELEELTAELQELEEKLE-ELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQL 318
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 542 EETSEETGHWQSMFQKNKEELRATKQELLQLRMEKEEMEEELGEKMEVLQrDLEQARASTRDthQVEELKKELRRTQGEL 621
Cdd:TIGR02168 319 EELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELE-ELESRLEELEE--QLETLRSKVAQLELQI 395
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 622 KELQAEQQNQEVTGRHQNQVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQdcEEASKAKVASETEAMVLGQRRATV 701
Cdd:TIGR02168 396 ASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEEL--EELQEELERLEEALEELREELEEA 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 702 ETTLRETQEENDEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVR 781
Cdd:TIGR02168 474 EQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIEAALGGRLQAVVVE 553
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 782 LDEAQRgLARLGQEQQALNRA------LEEEGKQREALRRSKAELEEQKRLLNRTV---DRLNKELEQIGDDSKLA--LQ 850
Cdd:TIGR02168 554 NLNAAK-KAIAFLKQNELGRVtflpldSIKGTEIQGNDREILKNIEGFLGVAKDLVkfdPKLRKALSYLLGGVLVVddLD 632
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 851 QLQAQMEDYKEKARKEVADAQRQAKDWAS---EAEKNSGGLSRlQDELQRLRQALQtsQAERDTARLDKEL--LAQRLQG 925
Cdd:TIGR02168 633 NALELAKKLRPGYRIVTLDGDLVRPGGVItggSAKTNSSILER-RREIEELEEKIE--ELEEKIAELEKALaeLRKELEE 709
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 926 LEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLER 1005
Cdd:TIGR02168 710 LEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEA 789
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1006 QNKDLKTRL-ASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQI--------------- 1069
Cdd:TIGR02168 790 QIEQLKEELkALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIeslaaeieeleelie 869
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1614229687 1070 --DDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLE 1133
Cdd:TIGR02168 870 elESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLE 935
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
331-1132 |
3.68e-21 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 100.52 E-value: 3.68e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 331 QMQPLGALAGQA----ELTRKMEELQK-----KLDEEVKKRQKLEPSRVGLERQLEEKAEECHRLQELLERRKGEVQQSS 401
Cdd:TIGR02168 201 QLKSLERQAEKAerykELKAELRELELallvlRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELE 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 402 KELQNMKLLLGQEEGLRHGLEAQVKELQLKLKHSQSPdsgKESLLKDLLDTRELLEELLEGKQRVEEQLRLRERELTALK 481
Cdd:TIGR02168 281 EEIEELQKELYALANEISRLEQQKQILRERLANLERQ---LEELEAQLEELESKLDELAEELAELEEKLEELKEELESLE 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 482 GALKEEVASHdQEVEHVRLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEET-GHWQSMFQKNKE 560
Cdd:TIGR02168 358 AELEELEAEL-EELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIeELLKKLEEAELK 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 561 ELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQARAstrdthQVEELKKELRRTQGELKELQAEQQNQEVTGRHQNQ 640
Cdd:TIGR02168 437 ELQAELEELEEELEELQEELERLEEALEELREELEEAEQ------ALDAAERELAQLQARLDSLERLQENLEGFSEGVKA 510
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 641 VLEKQ--------LAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKA----KVASETEAMVL---GQRRATVETTL 705
Cdd:TIGR02168 511 LLKNQsglsgilgVLSELISVDEGYEAAIEAALGGRLQAVVVENLNAAKKAiaflKQNELGRVTFLpldSIKGTEIQGND 590
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 706 RETQEENDEFRRRILGLEQQLKEARGLAE------------------------------------GGEAVEARLRDKVHR 749
Cdd:TIGR02168 591 REILKNIEGFLGVAKDLVKFDPKLRKALSyllggvlvvddldnalelakklrpgyrivtldgdlvRPGGVITGGSAKTNS 670
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 750 LEVEKQQLEEALNAAREEegnLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNR 829
Cdd:TIGR02168 671 SILERRREIEELEEKIEE---LEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEE 747
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 830 TVDRLNKELEQIgDDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAER 909
Cdd:TIGR02168 748 RIAQLSKELTEL-EAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERL 826
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 910 DTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQE 989
Cdd:TIGR02168 827 ESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELREL 906
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 990 RSARQDLECDKISLERQNKDLKTRLASSEgfQKPSASLSQLESQNQLLQERLQAEEREKTVLQStnrKLERRVKELSIQI 1069
Cdd:TIGR02168 907 ESKRSELRRELEELREKLAQLELRLEGLE--VRIDNLQERLSEEYSLTLEEAEALENKIEDDEE---EARRRLKRLENKI 981
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1614229687 1070 dDERQHVN----DQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQ-----HEVNEQLQARIKSL 1132
Cdd:TIGR02168 982 -KELGPVNlaaiEEYEELKERYDFLTAQKEDLTEAKETLEEAIEEIDREARERfkdtfDQVNENFQRVFPKL 1052
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
642-1159 |
4.08e-21 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 100.01 E-value: 4.08e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 642 LEKQLAALREEAD---RGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAmvLGQRRATVETTLRETQEENDEFRRR 718
Cdd:COG1196 198 LERQLEPLERQAEkaeRYRELKEELKELEAELLLLKLRELEAELEELEAELEE--LEAELEELEAELAELEAELEELRLE 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 719 ILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQA 798
Cdd:COG1196 276 LEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEE 355
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 799 LNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQMEDyKEKARKEVADAQRQAKDWA 878
Cdd:COG1196 356 AEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLER-LERLEEELEELEEALAELE 434
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 879 SEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKK---------------RFQDDKARQ 943
Cdd:COG1196 435 EEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAarllllleaeadyegFLEGVKAAL 514
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 944 LKSLEEKVSRLEAELDEEKNTVE---------LLTDRVNRGRDQVDQLRTELMQERSARQD-LECDKISLERQNKDLKTR 1013
Cdd:COG1196 515 LLAGLRGLAGAVAVLIGVEAAYEaaleaalaaALQNIVVEDDEVAAAAIEYLKAAKAGRATfLPLDKIRARAALAAALAR 594
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1014 LASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIdDERQHVNDQKDQLTLRVKALKRQ 1093
Cdd:COG1196 595 GAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVT-LEGEGGSAGGSLTGGSRRELLAA 673
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1614229687 1094 VDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKDAWRKASRSAAESALKQEGLSSDEE 1159
Cdd:COG1196 674 LLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLE 739
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
464-961 |
1.38e-20 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 98.47 E-value: 1.38e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 464 QRVEEQLRLRERELTALKGALKEEVASHDQEVEHVRLQYQRDTEQL---RRSMQDATQDHAALEAERQKMSSLVRELQRE 540
Cdd:COG1196 238 EAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELeeaQAEEYELLAELARLEQDIARLEERRRELEER 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 541 LEETSEETGHWQSMFQKNKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQARASTRdthQVEELKKELRRTQGE 620
Cdd:COG1196 318 LEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEE---ELEELAEELLEALRA 394
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 621 LKELQAEQQNQEVTGRHQNQVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRAT 700
Cdd:COG1196 395 AAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAAL 474
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 701 VETTLRETQEENDEFRRRILGLEQQLKEARGLAEGGEAveARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEV 780
Cdd:COG1196 475 LEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKA--ALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIV 552
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 781 RLDEAQRGLARLGQEQQALNRA----LEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQM 856
Cdd:COG1196 553 VEDDEVAAAAIEYLKAAKAGRAtflpLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARL 632
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 857 EDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRF 936
Cdd:COG1196 633 EAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEA 712
|
490 500
....*....|....*....|....*
gi 1614229687 937 QDDKARQLKSLEEKVSRLEAELDEE 961
Cdd:COG1196 713 EEERLEEELEEEALEEQLEAEREEL 737
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
335-903 |
5.92e-19 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 93.08 E-value: 5.92e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 335 LGALAGQAELTRKMEELQKKLDEevKKRQKLEPSRVGLERQLEEKAEECHRLQELLERRKGEVQQSSKELQNMKLLLGQe 414
Cdd:COG1196 202 LEPLERQAEKAERYRELKEELKE--LEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEE- 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 415 eglrhgLEAQVKELQLKLKHSQSPDSGKESLLKDLLDTRELLEELLEGKQRVEEQLRLRERELTALKGALKEEVASHDQE 494
Cdd:COG1196 279 ------LELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEE 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 495 VEHVRLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEETGHWQSMFQKNKEELRATKQELLQLRM 574
Cdd:COG1196 353 LEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAE 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 575 EKEEMEEELGEKMEVLQRDLEQARASTRDTHQVEELKKELRRTQGELKELQAEQQNQEVtgRHQNQVLEKQLAALREEAD 654
Cdd:COG1196 433 LEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAA--RLLLLLEAEADYEGFLEGV 510
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 655 RGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMV----------------LGQRRATVETTLRETQEENDEFRRR 718
Cdd:COG1196 511 KAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQnivveddevaaaaieyLKAAKAGRATFLPLDKIRARAALAA 590
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 719 ILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQA 798
Cdd:COG1196 591 ALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRREL 670
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 799 LNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDWA 878
Cdd:COG1196 671 LAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEE 750
|
570 580
....*....|....*....|....*..
gi 1614229687 879 SEAEKNSGGLSR--LQDELQRLRQALQ 903
Cdd:COG1196 751 EALEELPEPPDLeeLERELERLEREIE 777
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
311-1134 |
3.44e-17 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 87.43 E-value: 3.44e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 311 REGSSESEASVRRKVSLVLEQMQPLGALAGQAELTRKMEELQKKLDE-----EVKKRQKLEPSRVGLERQLEEKAEECHR 385
Cdd:TIGR02169 176 LEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREyegyeLLKEKEALERQKEAIERQLASLEEELEK 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 386 LQELLERRKGEVQQSSKELQNMKLL---LGQEEGLRhgLEAQVKELQLKLKHSQSPDSGKESLLKDLLDTRELLEELLEG 462
Cdd:TIGR02169 256 LTEEISELEKRLEEIEQLLEELNKKikdLGEEEQLR--VKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDK 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 463 KQRVEEQLRLRERELTALKGALKEEVASHDQEVEHVRLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELE 542
Cdd:TIGR02169 334 LLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQE 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 543 ETSEETGHWQSMFQKnKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQARASTRDTHQ-VEELKKELRRTQGEL 621
Cdd:TIGR02169 414 ELQRLSEELADLNAA-IAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEeYDRVEKELSKLQREL 492
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 622 KELQAEQQNQEVTGRHQNQVLE-------------KQLAALREEADRGRELEQQNLQLQ--KTLQQLRQDCEEASKAKVA 686
Cdd:TIGR02169 493 AEAEAQARASEERVRGGRAVEEvlkasiqgvhgtvAQLGSVGERYATAIEVAAGNRLNNvvVEDDAVAKEAIELLKRRKA 572
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 687 SE-------------------TEAMVLG----------QRRATVETTLRETQ-EENDEFRRRILG------LEQQLKEAR 730
Cdd:TIGR02169 573 GRatflplnkmrderrdlsilSEDGVIGfavdlvefdpKYEPAFKYVFGDTLvVEDIEAARRLMGkyrmvtLEGELFEKS 652
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 731 GLAEGG-------EAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRAL 803
Cdd:TIGR02169 653 GAMTGGsraprggILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEE 732
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 804 EEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIgddsKLALQQLQAQMEDYKekarkevadaqrqAKDWASEAEK 883
Cdd:TIGR02169 733 EKLKERLEELEEDLSSLEQEIENVKSELKELEARIEEL----EEDLHKLEEALNDLE-------------ARLSHSRIPE 795
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 884 NSGGLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKN 963
Cdd:TIGR02169 796 IQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEA 875
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 964 TVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGfqkpsaSLSQLESQNQLLQErLQA 1043
Cdd:TIGR02169 876 ALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEE------ELSEIEDPKGEDEE-IPE 948
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1044 EEREKTVLQSTNRKLERRVKELsiqidderQHVNdqkdqltlrvkalKRQVDEAEEEIERLDSLRKKAQRELEEQhevnE 1123
Cdd:TIGR02169 949 EELSLEDVQAELQRVEEEIRAL--------EPVN-------------MLAIQEYEEVLKRLDELKEKRAKLEEER----K 1003
|
890
....*....|.
gi 1614229687 1124 QLQARIKSLEK 1134
Cdd:TIGR02169 1004 AILERIEEYEK 1014
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
606-949 |
3.99e-16 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 83.95 E-value: 3.99e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 606 QVEELKKELRRTQGELkELQAEQQNQEVTGRHQNQVLEKQLAALREEadrgrELEQQNLQLQKTLQQLRQDCEEASKAKV 685
Cdd:TIGR02168 190 RLEDILNELERQLKSL-ERQAEKAERYKELKAELRELELALLVLRLE-----ELREELEELQEELKEAEEELEELTAELQ 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 686 ASETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAR 765
Cdd:TIGR02168 264 ELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELE 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 766 EEEGNLAAAKRALEVRLDEAQrglarlgQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDS 845
Cdd:TIGR02168 344 EKLEELKEELESLEAELEELE-------AELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRR 416
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 846 KLALQQLQAQMEDYKEKARKEVadaQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQG 925
Cdd:TIGR02168 417 ERLQQEIEELLKKLEEAELKEL---QAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDS 493
|
330 340
....*....|....*....|....
gi 1614229687 926 LEQEAENKKRFQDDKARQLKSLEE 949
Cdd:TIGR02168 494 LERLQENLEGFSEGVKALLKNQSG 517
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
341-1009 |
2.21e-14 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 78.64 E-value: 2.21e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 341 QAELTRKMEELQKKldEEVKK----RQKLEPSRVGLERQLEE--KAEECHRLQE---LLERRKGEVQQSSKELQNMKLLL 411
Cdd:PTZ00121 1123 KAEDARKAEEARKA--EDARKaeeaRKAEDAKRVEIARKAEDarKAEEARKAEDakkAEAARKAEEVRKAEELRKAEDAR 1200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 412 GQEEGLRHGLEAQVKELQLKLKHSQSPDSGK-ESLLKDLLDTRELLEELLEGKQRVEEQLRLREreLTALKGALKEEVAS 490
Cdd:PTZ00121 1201 KAEAARKAEEERKAEEARKAEDAKKAEAVKKaEEAKKDAEEAKKAEEERNNEEIRKFEEARMAH--FARRQAAIKAEEAR 1278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 491 HDQEVEhvRLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEETGHWQSMFQKNKEELRATKQELL 570
Cdd:PTZ00121 1279 KADELK--KAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAA 1356
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 571 QLRMEKEEMEEELGEKMEVLQRDLEQARASTRDTHQVEELKK---ELRRTQGELKELQAEQQNQEVTGRHQNQVLEKQLA 647
Cdd:PTZ00121 1357 DEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKkaeEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEA 1436
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 648 ALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVAseteamvlgQRRATVETTLRETQEENDEFRRRILGLEQQLK 727
Cdd:PTZ00121 1437 KKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEA---------KKKAEEAKKADEAKKKAEEAKKKADEAKKAAE 1507
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 728 EARGLAEGGEAVEARLRDKVHRLEvEKQQLEEALNAarEEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALeeeg 807
Cdd:PTZ00121 1508 AKKKADEAKKAEEAKKADEAKKAE-EAKKADEAKKA--EEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMAL---- 1580
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 808 KQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQmedykEKARKEVADAQRQAKDWASEAEKnsgg 887
Cdd:PTZ00121 1581 RKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKA-----EEEKKKVEQLKKKEAEEKKKAEE---- 1651
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 888 lSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEE----KVSRLEAELDEEKN 963
Cdd:PTZ00121 1652 -LKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAeekkKAEELKKAEEENKI 1730
|
650 660 670 680
....*....|....*....|....*....|....*....|....*.
gi 1614229687 964 TVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKD 1009
Cdd:PTZ00121 1731 KAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKE 1776
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
614-1127 |
3.45e-14 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 77.39 E-value: 3.45e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 614 LRRTQGELKELQAEQQNQEVTGRHQN-QVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAM 692
Cdd:PRK02224 182 LSDQRGSLDQLKAQIEEKEEKDLHERlNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELETLEAEIE 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 693 VLGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEAL-------NAAR 765
Cdd:PRK02224 262 DLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLeecrvaaQAHN 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 766 EEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDs 845
Cdd:PRK02224 342 EEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREE- 420
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 846 KLALQQLQAQMEDYKEKARKEVADAQR-QAKDWASEAEKNSGGlSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQ 924
Cdd:PRK02224 421 RDELREREAELEATLRTARERVEEAEAlLEAGKCPECGQPVEG-SPHVETIEEDRERVEELEAELEDLEEEVEEVEERLE 499
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 925 GLEQEAENKKRFQddkarqlkSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDK---- 1000
Cdd:PRK02224 500 RAEDLVEAEDRIE--------RLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAeear 571
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1001 ---ISLERQNKDLKTRLASSEGFQKPSASLSQLESQNQLLQERLQA-----EEREKTVLQSTNRKLE------------- 1059
Cdd:PRK02224 572 eevAELNSKLAELKERIESLERIRTLLAAIADAEDEIERLREKREAlaelnDERRERLAEKRERKREleaefdearieea 651
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1614229687 1060 ----RRVKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQReLEEQHEVNEQLQA 1127
Cdd:PRK02224 652 redkERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEELEELRERREALENRVEA-LEALYDEAEELES 722
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
337-1135 |
3.49e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 74.33 E-value: 3.49e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 337 ALAGQAELTRKMEELQKKLDEEVKKRQKLEPSRvglerqleEKAEECHRLQELLERRKGevqqsskelqnmKLLLGQEEG 416
Cdd:TIGR02169 175 ALEELEEVEENIERLDLIIDEKRQQLERLRRER--------EKAERYQALLKEKREYEG------------YELLKEKEA 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 417 LRHGLEAQVKELqlklkhsqspdSGKESLLKDLLDTRELLEELLEGKQRVEEQLRLRERELTALKG-ALKEEVASHDQEV 495
Cdd:TIGR02169 235 LERQKEAIERQL-----------ASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQlRVKEKIGELEAEI 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 496 EhvrlQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEETGHWQSMFQKNKEELRATKQELLQLRME 575
Cdd:TIGR02169 304 A----SLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKE 379
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 576 KEEMEEELGEkmevLQRDLEQArastrdTHQVEELKKELRRTQGELKELQAEQQNQevtgRHQNQVLEKQLAALREEAdr 655
Cdd:TIGR02169 380 FAETRDELKD----YREKLEKL------KREINELKRELDRLQEELQRLSEELADL----NAAIAGIEAKINELEEEK-- 443
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 656 greleqqnlqlqktlqqlrqdcEEASKAKVASETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARGLAE- 734
Cdd:TIGR02169 444 ----------------------EDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARa 501
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 735 ------GGEAVEARLRDK---VHRLEVEKQQLEEALNAAREEEG----------NLAAAKRALEVRLDE----------- 784
Cdd:TIGR02169 502 seervrGGRAVEEVLKASiqgVHGTVAQLGSVGERYATAIEVAAgnrlnnvvveDDAVAKEAIELLKRRkagratflpln 581
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 785 ---AQRGLARLGQEQQALNRAL---EEEGKQREALRRSKAE------LEEQKRLLN--RTVDRLNKELEQI-----GDDS 845
Cdd:TIGR02169 582 kmrDERRDLSILSEDGVIGFAVdlvEFDPKYEPAFKYVFGDtlvvedIEAARRLMGkyRMVTLEGELFEKSgamtgGSRA 661
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 846 KLALQQLQAQMEDYKEKARKEVADAQRQAKDWASEaeknsggLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQG 925
Cdd:TIGR02169 662 PRGGILFSRSEPAELQRLRERLEGLKRELSSLQSE-------LRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEK 734
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 926 LEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNR-----GRDQVDQLRTELMQERSARQDLECDK 1000
Cdd:TIGR02169 735 LKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDlearlSHSRIPEIQAELSKLEEEVSRIEARL 814
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1001 ISLERQNKDLKTRLASSEgfqkpsASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQI---DDERQHVN 1077
Cdd:TIGR02169 815 REIEQKLNRLTLEKEYLE------KEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALrdlESRLGDLK 888
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*...
gi 1614229687 1078 DQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKD 1135
Cdd:TIGR02169 889 KERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEI 946
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
696-1133 |
7.72e-13 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 73.15 E-value: 7.72e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 696 QRRATVET--TLRETQEENDEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAA 773
Cdd:PRK02224 228 QREQARETrdEADEVLEEHEERREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDA 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 774 AKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIG---DDSKLALQ 850
Cdd:PRK02224 308 DAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAReavEDRREEIE 387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 851 QLQAQMEDykekARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQ------------------------ 906
Cdd:PRK02224 388 ELEEEIEE----LRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARerveeaealleagkcpecgqpveg 463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 907 ------------------AERDTARLDKELLAQRLQGLEQEAENKKRFQddkarqlkSLEEKVSRLEAELDEEKNTVELL 968
Cdd:PRK02224 464 sphvetieedrerveeleAELEDLEEEVEEVEERLERAEDLVEAEDRIE--------RLEERREDLEELIAERRETIEEK 535
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 969 TDRVNRGRDQVDQLRTELMQERSARQDLECDK-------ISLERQNKDLKTRLASSEGFQKPSASLSQLESQNQLLQERL 1041
Cdd:PRK02224 536 RERAEELRERAAELEAEAEEKREAAAEAEEEAeeareevAELNSKLAELKERIESLERIRTLLAAIADAEDEIERLREKR 615
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1042 QAEEREKTVLQSTNRKLERRVKELSIQIDDER---------------QHVNDQKDQLTLRVKALKRQVDEAEEEIERLDS 1106
Cdd:PRK02224 616 EALAELNDERRERLAEKRERKRELEAEFDEARieearedkeraeeylEQVEEKLDELREERDDLQAEIGAVENELEELEE 695
|
490 500
....*....|....*....|....*..
gi 1614229687 1107 LRKKaQRELEEQHEVNEQLQARIKSLE 1133
Cdd:PRK02224 696 LRER-REALENRVEALEALYDEAEELE 721
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
703-1165 |
3.07e-12 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 71.48 E-value: 3.07e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 703 TTLRETQEENDEFRRR------ILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEkqQLEEALNAAREEEGNLAAAKR 776
Cdd:COG4913 235 DDLERAHEALEDAREQiellepIRELAERYAAARERLAELEYLRAALRLWFAQRRLE--LLEAELEELRAELARLEAELE 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 777 ALEVRLDEAQRglarlgQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIG---DDSKLALQQLQ 853
Cdd:COG4913 313 RLEARLDALRE------ELDELEAQIRGNGGDRLEQLEREIERLERELEERERRRARLEALLAALGlplPASAEEFAALR 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 854 AQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARldkELLAQRLQGLEQE---- 929
Cdd:COG4913 387 AEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLALR---DALAEALGLDEAElpfv 463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 930 ------AENKKRFQDDKARQLKSL-------EEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTE----------- 985
Cdd:COG4913 464 gelievRPEEERWRGAIERVLGGFaltllvpPEHYAAALRWVNRLHLRGRLVYERVRTGLPDPERPRLDpdslagkldfk 543
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 986 -------LMQERSARQDLEC----------DK-ISLERQNKDLKTRLASseGFQKPSASLSQLESQN----QLLQERLQA 1043
Cdd:COG4913 544 phpfrawLEAELGRRFDYVCvdspeelrrhPRaITRAGQVKGNGTRHEK--DDRRRIRSRYVLGFDNraklAALEAELAE 621
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1044 EEREKTVLQSTNRKLERRVKELSIQ-------------------IDDERQHVNDQKDQLTL---RVKALKRQVDEAEEEI 1101
Cdd:COG4913 622 LEEELAEAEERLEALEAELDALQERrealqrlaeyswdeidvasAEREIAELEAELERLDAssdDLAALEEQLEELEAEL 701
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1614229687 1102 ERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKDAWRKASRSAAESALKQEGLSSDEEFDNVYD 1165
Cdd:COG4913 702 EELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAVER 765
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
754-1113 |
3.96e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 70.86 E-value: 3.96e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 754 KQQLEEALNAAREEEGNLAAakraLEVRLDEAQRGLARLGQEQQALNRALE----EEGKQREALRRSKAELEEQKRLLNR 829
Cdd:TIGR02168 171 KERRKETERKLERTRENLDR----LEDILNELERQLKSLERQAEKAERYKElkaeLRELELALLVLRLEELREELEELQE 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 830 TVDRLNKELEQIGDDSKLALQQLQaQMEDYKEKARKEVADAQRQAKDWASEaeknsggLSRLQDELQRLRQALQTSQAER 909
Cdd:TIGR02168 247 ELKEAEEELEELTAELQELEEKLE-ELRLEVSELEEEIEELQKELYALANE-------ISRLEQQKQILRERLANLERQL 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 910 DTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQE 989
Cdd:TIGR02168 319 EELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASL 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 990 RSARQDLECDKISLERQNKDLKTrlassegfQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQI 1069
Cdd:TIGR02168 399 NNEIERLEARLERLEDRRERLQQ--------EIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREEL 470
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 1614229687 1070 D---DERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQR 1113
Cdd:TIGR02168 471 EeaeQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSG 517
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
339-1159 |
1.00e-11 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 69.62 E-value: 1.00e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 339 AGQAELTRKMEELQKKLDEEVKKRQKLEPSRVGLERQLE------EKAEECHRLQELLERRKGEVQQSSKELQNMKLLLG 412
Cdd:pfam02463 162 AAGSRLKRKKKEALKKLIEETENLAELIIDLEELKLQELklkeqaKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDL 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 413 QEEGLRHGLEAQVKELQL------KLKHSQSPDSGKESLLKDLLDTRELLEELLEGKQRVEEQLRLRERELTALKGALKE 486
Cdd:pfam02463 242 LQELLRDEQEEIESSKQEiekeeeKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEK 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 487 EVASHDQEV----------EHVRLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEETGHWQSMFQ 556
Cdd:pfam02463 322 EKKKAEKELkkekeeieelEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKS 401
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 557 KNKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQARA-STRDTHQVEELKKELRRTQGELKELQAEQQNQEVTG 635
Cdd:pfam02463 402 EEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGkLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVK 481
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 636 RHQNQVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDC--EEASKAKVASETEAMVLGQRRATVETTLRETQEEND 713
Cdd:pfam02463 482 LQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRiiSAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVE 561
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 714 EFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLG 793
Cdd:pfam02463 562 ERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESA 641
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 794 QEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQMEDYKEKARKEVADAQRQ 873
Cdd:pfam02463 642 KAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEE 721
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 874 AKDWASEAEKNSGGLsRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSR 953
Cdd:pfam02463 722 LLADRVQEAQDKINE-ELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQE 800
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 954 LEAELDEEKNTVELLTDRvnrgRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEgfqkpsaSLSQLESQ 1033
Cdd:pfam02463 801 EELRALEEELKEEAELLE----EEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEE-------EITKEELL 869
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1034 NQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQR 1113
Cdd:pfam02463 870 QELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKE 949
|
810 820 830 840
....*....|....*....|....*....|....*....|....*.
gi 1614229687 1114 ELEEQHEVNEQLQARIKSLEKDAWRKASRSAAESALKQEGLSSDEE 1159
Cdd:pfam02463 950 KEENNKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDEL 995
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
751-1102 |
1.09e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 69.71 E-value: 1.09e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 751 EVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEG----KQREALRRSKAELEEQKRL 826
Cdd:TIGR02169 169 DRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGyellKEKEALERQKEAIERQLAS 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 827 LNRTVDRLNKELEQIGDDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQ 906
Cdd:TIGR02169 249 LEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLE 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 907 AERDTARLDKELLAQRLQ-------GLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQV 979
Cdd:TIGR02169 329 AEIDKLLAEIEELEREIEeerkrrdKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKREL 408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 980 DQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEgfqkpsASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLE 1059
Cdd:TIGR02169 409 DRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKA------LEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVE 482
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1614229687 1060 RRVKELSIQIDDerqhVNDQKDQLTLRVKALKRQVDEAEEEIE 1102
Cdd:TIGR02169 483 KELSKLQRELAE----AEAQARASEERVRGGRAVEEVLKASIQ 521
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
849-1173 |
1.80e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 68.81 E-value: 1.80e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 849 LQQLQAQMEDYKEKARKevadaQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQtsQAERDTARLDKELLAQRLQGLEQ 928
Cdd:COG1196 195 LGELERQLEPLERQAEK-----AERYRELKEELKELEAELLLLKLRELEAELEEL--EAELEELEAELEELEAELAELEA 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 929 EAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNK 1008
Cdd:COG1196 268 ELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELE 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1009 DLKTRLASSEG-FQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLRV 1087
Cdd:COG1196 348 EAEEELEEAEAeLAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELE 427
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1088 KALKRQVDEAEEEIERLDSlRKKAQRELEEQHEVNEQLQARIKS---LEKDAWRKASRSAAESALKQEGLSSDEEFDNVY 1164
Cdd:COG1196 428 EALAELEEEEEEEEEALEE-AAEEEAELEEEEEALLELLAELLEeaaLLEAALAELLEELAEAAARLLLLLEAEADYEGF 506
|
....*....
gi 1614229687 1165 DPSSIASLL 1173
Cdd:COG1196 507 LEGVKAALL 515
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
343-1182 |
2.60e-11 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 68.22 E-value: 2.60e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 343 ELTRKMEELQKKLDEEVKKRQKLEPSRVGLERQLEEKAeecHRLQELLERRKGEVQQSSKELQNMKLLLGQEEGLRHGLE 422
Cdd:pfam15921 114 DLQTKLQEMQMERDAMADIRRRESQSQEDLRNQLQNTV---HELEAAKCLKEDMLEDSNTQIEQLRKMMLSHEGVLQEIR 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 423 AQVKELQlklkhsqsPDSGKESLLKDLLDTRELLEELLEgkqrVEEQLRLRERELTALKG-------ALKEEVASHDQEV 495
Cdd:pfam15921 191 SILVDFE--------EASGKKIYEHDSMSTMHFRSLGSA----ISKILRELDTEISYLKGrifpvedQLEALKSESQNKI 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 496 EHVRLQYQRDTEQLrrsMQDATQDHAALEAERQKMSSLVRELQRELEETSEETGHWQSMFQKNKEELRATKQEllqlrme 575
Cdd:pfam15921 259 ELLLQQHQDRIEQL---ISEHEVEITGLTEKASSARSQANSIQSQLEIIQEQARNQNSMYMRQLSDLESTVSQ------- 328
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 576 keemeeelgekmevLQRDLEQARASTRDthQVEELKKELRRTQGELKELQAEQQNQEVTGRHQNQVLEKQLAALREeadR 655
Cdd:pfam15921 329 --------------LRSELREAKRMYED--KIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHK---R 389
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 656 GRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARGLAEG 735
Cdd:pfam15921 390 EKELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMAAIQGKNESLEKVSSLTAQ 469
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 736 GEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQR----- 810
Cdd:pfam15921 470 LESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEGDHLRnvqte 549
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 811 -EALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKlALQQLQAQMEdykekarKEVADAQRQAKDWASEAEKNSGGLS 889
Cdd:pfam15921 550 cEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAG-AMQVEKAQLE-------KEINDRRLELQEFKILKDKKDAKIR 621
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 890 RLQDELQRLR-QALQTSQAERDTARLDKELLAQRLQGLEQEAENKKrfqddkarQLKSLEEKVSRLEAELDEEKNTVELL 968
Cdd:pfam15921 622 ELEARVSDLElEKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRN--------ELNSLSEDYEVLKRNFRNKSEEMETT 693
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 969 TDRVNrgrdqvdqlrtelMQERSARQDLECDKISLERQNKDLKTRLASSEGFQK----PSASLSQLESQNQLLQERLQAE 1044
Cdd:pfam15921 694 TNKLK-------------MQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQKqitaKRGQIDALQSKIQFLEEAMTNA 760
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1045 EREKTVLQSTNRKLERRVKELSIQ---IDDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKaqrelEEQHEV 1121
Cdd:pfam15921 761 NKEKHFLKEEKNKLSQELSTVATEknkMAGELEVLRSQERRLKEKVANMEVALDKASLQFAECQDIIQR-----QEQESV 835
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1614229687 1122 NEQLQARIKSLEKDAWRKASRSAAESALKQEGlSSDEEFDNVYDPSSIASLLTESNLQTSS 1182
Cdd:pfam15921 836 RLKLQHTLDVKELQGPGYTSNSSMKPRLLQPA-SFTRTHSNVPSSQSTASFLSHHSRKTNA 895
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
901-1153 |
4.91e-11 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 65.94 E-value: 4.91e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 901 ALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVD 980
Cdd:COG4942 14 AAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 981 QLRTELMQERSARQDLECDKISLERQNKDLktRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLER 1060
Cdd:COG4942 94 ELRAELEAQKEELAELLRALYRLGRQPPLA--LLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEA 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1061 RVKELSIQIDDERQhvndqkdqltlRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKDAWRKA 1140
Cdd:COG4942 172 ERAELEALLAELEE-----------ERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAA 240
|
250
....*....|...
gi 1614229687 1141 SRSAAESALKQEG 1153
Cdd:COG4942 241 ERTPAAGFAALKG 253
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
741-976 |
1.23e-10 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 64.79 E-value: 1.23e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 741 ARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAEL 820
Cdd:COG4942 23 AEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQ 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 821 EEQKRLLNRTVDRLNK--ELEQIGDDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDwasEAEKNSGGLSRLQDELQRL 898
Cdd:COG4942 103 KEELAELLRALYRLGRqpPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLA---ELAALRAELEAERAELEAL 179
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1614229687 899 RQALQTSQAERDTARLDKEllaQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGR 976
Cdd:COG4942 180 LAELEEERAALEALKAERQ---KLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGFAALKGK 254
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
771-992 |
1.25e-10 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 64.79 E-value: 1.25e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 771 LAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGD---DSKL 847
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAelaELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 848 ALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLE 927
Cdd:COG4942 91 EIAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELE 170
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1614229687 928 QEAENKKRFQDDKARQLKSLE-------EKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSA 992
Cdd:COG4942 171 AERAELEALLAELEEERAALEalkaerqKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
464-974 |
2.57e-10 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 64.94 E-value: 2.57e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 464 QRVEEQLRLRERELTALKGALKEEVASHDQEVEHVRLQYQ----RDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQR 539
Cdd:COG4913 294 EAELEELRAELARLEAELERLEARLDALREELDELEAQIRgnggDRLEQLEREIERLERELEERERRRARLEALLAALGL 373
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 540 ELEETSEEtghwqsmFQKNKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQ---------ARASTRDTHQV--- 607
Cdd:COG4913 374 PLPASAEE-------FAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELREleaeiasleRRKSNIPARLLalr 446
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 608 EELKKELRRTQ------GELKELQAEQQNQE---------------VTGRHQNQVLEkqlaALREEADRGREleQQNLQL 666
Cdd:COG4913 447 DALAEALGLDEaelpfvGELIEVRPEEERWRgaiervlggfaltllVPPEHYAAALR----WVNRLHLRGRL--VYERVR 520
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 667 QKTLQQLRQDCEEAS-------KAKVASETEAMVLGQR--RATVET---------------------TLRETQEENDEFR 716
Cdd:COG4913 521 TGLPDPERPRLDPDSlagkldfKPHPFRAWLEAELGRRfdYVCVDSpeelrrhpraitragqvkgngTRHEKDDRRRIRS 600
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 717 RRILG---------LEQQLKEARGLAEGGEAVEARLRDKVHRLEvEKQQLEEALNAAREEEGNLAAAKRALE------VR 781
Cdd:COG4913 601 RYVLGfdnraklaaLEAELAELEEELAEAEERLEALEAELDALQ-ERREALQRLAEYSWDEIDVASAEREIAeleaelER 679
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 782 LDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLAL-QQLQAQMEDYK 860
Cdd:COG4913 680 LDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELrALLEERFAAAL 759
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 861 EKARkevadAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQtSQAERDTARLDKELLA-----QRLQGLEQE--AENK 933
Cdd:COG4913 760 GDAV-----ERELRENLEERIDALRARLNRAEEELERAMRAFN-REWPAETADLDADLESlpeylALLDRLEEDglPEYE 833
|
570 580 590 600
....*....|....*....|....*....|....*....|.
gi 1614229687 934 KRFQDdkaRQLKSLEEKVSRLEAELDEEKNTVELLTDRVNR 974
Cdd:COG4913 834 ERFKE---LLNENSIEFVADLLSKLRRAIREIKERIDPLND 871
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
342-1118 |
5.96e-10 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 63.84 E-value: 5.96e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 342 AELTRKMEELQKKLDEEVKKRQKLEPSRVGLERQLEEKAEECHRLQELLERRKGEVQQSSKELQNMKLLLGQEEGLRHGL 421
Cdd:pfam02463 198 QELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEE 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 422 EAQVKELQLKLKHSQSPdsgKESLLKDLLDTRELLEELLEGKQRVEEQLRLRERELTALKGALKEEvashdqevEHVRLQ 501
Cdd:pfam02463 278 EKEKKLQEEELKLLAKE---EEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEEL--------EKELKE 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 502 YQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEETGHWQSMFQKNKEELRATKQELLQLRMEKEEMEE 581
Cdd:pfam02463 347 LEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKK 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 582 ELGEKMEVLQRDLEQARAS-TRDTHQVEELKKELRRTQGELKELQAEQQNQEVTGRHQNQVLEKQLAALREEADRGRELE 660
Cdd:pfam02463 427 EELEILEEEEESIELKQGKlTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKAR 506
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 661 QQNLQLQKTLQQLRQDC--EEASKAKVASETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARGLAEGGEA 738
Cdd:pfam02463 507 SGLKVLLALIKDGVGGRiiSAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPK 586
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 739 VEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAA-------KRALEVRLDEAQRGLARLGQEQQALNRALEEEGK--Q 809
Cdd:pfam02463 587 LKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAkvvegilKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEvkA 666
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 810 REALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLS 889
Cdd:pfam02463 667 SLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKID 746
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 890 RLQDELQRLRQALQTSQAER-----DTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNT 964
Cdd:pfam02463 747 EEEEEEEKSRLKKEEKEEEKselslKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQ 826
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 965 VELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKPSASLSQLESQNQLLQERLQAE 1044
Cdd:pfam02463 827 EEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEES 906
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1045 EREKTVLQSTNRKLERRVKELSIQIDDERQHVND-------------------QKDQLTLRVKALKRQVD---------- 1095
Cdd:pfam02463 907 QKLNLLEEKENEIEERIKEEAEILLKYEEEPEELlleeadekekeennkeeeeERNKRLLLAKEELGKVNlmaieefeek 986
|
810 820
....*....|....*....|....*...
gi 1614229687 1096 -----EAEEEIERLDSLRKKAQRELEEQ 1118
Cdd:pfam02463 987 eerynKDELEKERLEEEKKKLIRAIIEE 1014
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
345-1175 |
7.78e-10 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 63.27 E-value: 7.78e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 345 TRKMEELQKKLDEEVK-----------------KRQKLEPSRVGLERQLEEKAEECHRLQELLERRKGEVQQSSKELQNM 407
Cdd:pfam01576 1 TRQEEEMQAKEEELQKvkerqqkaeselkelekKHQQLCEEKNALQEQLQAETELCAEAEEMRARLAARKQELEEILHEL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 408 KLLLGQEEGLRHGLEAQVKELQLKLK----HSQSPDSGKESLLKDLLDTRELLEELLEGKQRVEEQLRLRERELTALKGA 483
Cdd:pfam01576 81 ESRLEEEEERSQQLQNEKKKMQQHIQdleeQLDEEEAARQKLQLEKVTTEAKIKKLEEDILLLEDQNSKLSKERKLLEER 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 484 LKEEVASHDQEVEHV------RLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEETGHWQSMFQK 557
Cdd:pfam01576 161 ISEFTSNLAEEEEKAkslsklKNKHEAMISDLEERLKKEEKGRQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLAK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 558 NKEELRATKQELLQ---LRMEKEEMEEELGEKMEVLQRDLEQARAS-TRDTHQVEELKKELRRTQGELKE-LQAEQQNQE 632
Cdd:pfam01576 241 KEEELQAALARLEEetaQKNNALKKIRELEAQISELQEDLESERAArNKAEKQRRDLGEELEALKTELEDtLDTTAAQQE 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 633 VTGRHQNQVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRATVETTLRETQEEN 712
Cdd:pfam01576 321 LRSKREQEVTELKKALEEETRSHEAQLQEMRQKHTQALEELTEQLEQAKRNKANLEKAKQALESENAELQAELRTLQQAK 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 713 DEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARL 792
Cdd:pfam01576 401 QDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQEE 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 793 GQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEqigdDSKLALQQLQA---QMEDYKEKARKEVAD 869
Cdd:pfam01576 481 TRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLS----DMKKKLEEDAGtleALEEGKKRLQRELEA 556
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 870 AQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQ-----TSQAERDTARLDkellaqrlQGLEQEAENKKRFQDDKARQL 944
Cdd:pfam01576 557 LTQQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDhqrqlVSNLEKKQKKFD--------QMLAEEKAISARYAEERDRAE 628
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 945 KSLEEKVSR---LEAELDEEKNTVELLtDRVNRgrdqvdQLRTELMQERSARQD-------LECDKISLERQNKDLKTRL 1014
Cdd:pfam01576 629 AEAREKETRalsLARALEEALEAKEEL-ERTNK------QLRAEMEDLVSSKDDvgknvheLERSKRALEQQVEEMKTQL 701
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1015 ASSEG-FQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRK-LERRVKELSIQIDDERQH---VNDQKDQLTLRVKA 1089
Cdd:pfam01576 702 EELEDeLQATEDAKLRLEVNMQALKAQFERDLQARDEQGEEKRRqLVKQVRELEAELEDERKQraqAVAAKKKLELDLKE 781
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1090 LKRQV-------DEAEEEIERLDSLRKKAQRELEEQHEVNEQLQA-------RIKSLEKDAWR-KASRSAAESALKQEGL 1154
Cdd:pfam01576 782 LEAQIdaankgrEEAVKQLKKLQAQMKDLQRELEEARASRDEILAqskesekKLKNLEAELLQlQEDLAASERARRQAQQ 861
|
890 900
....*....|....*....|.
gi 1614229687 1155 SSDEEFDNVYDPSSIASLLTE 1175
Cdd:pfam01576 862 ERDELADEIASGASGKSALQD 882
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
507-1104 |
1.13e-09 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 63.01 E-value: 1.13e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 507 EQLRRSMQDATQDHAALEAERQKMSSL--VRELQRELEETSEETGHWQSMFQKNKEELRATKQELLQLRMEKeemeeelg 584
Cdd:COG4913 228 DALVEHFDDLERAHEALEDAREQIELLepIRELAERYAAARERLAELEYLRAALRLWFAQRRLELLEAELEE-------- 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 585 ekmevLQRDLEQARASTRdthQVEELKKELRRTQGELKELQAEQQNQEVtgrhqnQVLEKQLAALREEADRGRELEQQNL 664
Cdd:COG4913 300 -----LRAELARLEAELE---RLEARLDALREELDELEAQIRGNGGDRL------EQLEREIERLERELEERERRRARLE 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 665 qlqktlqqlrqdcEEASKAKVASETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARGLAEGGEAVEARLR 744
Cdd:COG4913 366 -------------ALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLE 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 745 DKVHRLEVEKQQLEEALNAA-REEEGNLAAAKRALEVRLDEAQ---------RGLA-RLGQEQQALNRALE--EEGKQRE 811
Cdd:COG4913 433 RRKSNIPARLLALRDALAEAlGLDEAELPFVGELIEVRPEEERwrgaiervlGGFAlTLLVPPEHYAAALRwvNRLHLRG 512
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 812 ALRRSKAELEEQKRLLNRTVDR----------------LNKELEQIGD----DSKLALQQ------LQAQMedYKEKARK 865
Cdd:COG4913 513 RLVYERVRTGLPDPERPRLDPDslagkldfkphpfrawLEAELGRRFDyvcvDSPEELRRhpraitRAGQV--KGNGTRH 590
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 866 EVADAQRQAKDW---ASEAEKnsggLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQDdkar 942
Cdd:COG4913 591 EKDDRRRIRSRYvlgFDNRAK----LAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEID---- 662
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 943 qLKSLEEKVSRLEAELdeekntvelltDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLAssegfqk 1022
Cdd:COG4913 663 -VASAEREIAELEAEL-----------ERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELE------- 723
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1023 psaslsQLESQNQLLQERLQAEEREKTVLQSTNrkLERRVKELsiqidDERQHVNDQKDQLTLRVKALKRQVDEAEEEIE 1102
Cdd:COG4913 724 ------QAEEELDELQDRLEAAEDLARLELRAL--LEERFAAA-----LGDAVERELRENLEERIDALRARLNRAEEELE 790
|
..
gi 1614229687 1103 RL 1104
Cdd:COG4913 791 RA 792
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
779-1148 |
1.28e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 62.78 E-value: 1.28e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 779 EVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELeqigddsklaLQQLQAqMED 858
Cdd:TIGR02169 169 DRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGYEL----------LKEKEA-LER 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 859 YKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTArldkelLAQRLQGLEQEAENKKRFQD 938
Cdd:TIGR02169 238 QKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLR------VKEKIGELEAEIASLERSIA 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 939 DKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASse 1018
Cdd:TIGR02169 312 EKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKD-- 389
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1019 gfqkpsaslsqlesqnqlLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTlrvkALKRQVDEAE 1098
Cdd:TIGR02169 390 ------------------YREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKIN----ELEEEKEDKA 447
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1614229687 1099 EEI-------ERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKD-AWRKASRSAAESA 1148
Cdd:TIGR02169 448 LEIkkqewklEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRElAEAEAQARASEER 505
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
686-1128 |
1.48e-09 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 62.63 E-value: 1.48e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 686 ASETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARG--LAEGGEAVEarlrdkvhRLEVEKQQLEEALNA 763
Cdd:COG4913 285 FAQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAqiRGNGGDRLE--------QLEREIERLERELEE 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 764 AREEEGNLAAAKRALEVRLDEAQRGLARLgqeQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEqigd 843
Cdd:COG4913 357 RERRRARLEALLAALGLPLPASAEEFAAL---RAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIA---- 429
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 844 dsklALQQLQAQMEDYKEKARKEVADA-----------------QRQAKDWASEAEK--NSGGLSRLQDELQ-------- 896
Cdd:COG4913 430 ----SLERRKSNIPARLLALRDALAEAlgldeaelpfvgelievRPEEERWRGAIERvlGGFALTLLVPPEHyaaalrwv 505
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 897 ---RLRQALQTSQAERDTARLD------------------------KELLAQR--------LQGLEQEA----------E 931
Cdd:COG4913 506 nrlHLRGRLVYERVRTGLPDPErprldpdslagkldfkphpfrawlEAELGRRfdyvcvdsPEELRRHPraitragqvkG 585
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 932 NKKRFQDDK--------------ARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTeLMQERSARQDLE 997
Cdd:COG4913 586 NGTRHEKDDrrrirsryvlgfdnRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQR-LAEYSWDEIDVA 664
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 998 cdkiSLERQNKDLKTRLASsegFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKelsiQIDDERQHVN 1077
Cdd:COG4913 665 ----SAEREIAELEAELER---LDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELE----QAEEELDELQ 733
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|.
gi 1614229687 1078 DQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQAR 1128
Cdd:COG4913 734 DRLEAAEDLARLELRALLEERFAAALGDAVERELRENLEERIDALRARLNR 784
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
385-1134 |
2.23e-09 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 61.99 E-value: 2.23e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 385 RLQELLERRKGEVQQSSKELQNMKLLLGQEEGLRHGLEAQVKELQLKLKHSQSPDSGKESL---LKDLLDTRELLEELLE 461
Cdd:TIGR00606 190 TLRQVRQTQGQKVQEHQMELKYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPLknrLKEIEHNLSKIMKLDN 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 462 GKQRVEEQLRLRERELTALKGALKEEVASHDQEVEHVRLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQREL 541
Cdd:TIGR00606 270 EIKALKSRKKQMEKDNSELELKMEKVFQGTDEQLNDLYHNHQRTVREKERELVDCQRELEKLNKERRLLNQEKTELLVEQ 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 542 EETS--EETGHWQSMFQKNKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQARASTRDthqVEELKKELRRTQG 619
Cdd:TIGR00606 350 GRLQlqADRHQEHIRARDSLIQSLATRLELDGFERGPFSERQIKNFHTLVIERQEDEAKTAAQL---CADLQSKERLKQE 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 620 ELKELQAEQQNQEVTGRHQNQVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEA-----MVL 694
Cdd:TIGR00606 427 QADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILELDQELRKAERELSKAEKNSLTETlkkevKSL 506
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 695 GQRRATVETTLRETQEENDEFRRRILGLEQQLKEARGLAEGGEaveaRLRDKVHRLEVE----------KQQLEEALNAA 764
Cdd:TIGR00606 507 QNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEMLTKDKMDKDE----QIRKIKSRHSDEltsllgyfpnKKQLEDWLHSK 582
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 765 REEegnlaaaKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLlNRTVDRLNKELEQIGDD 844
Cdd:TIGR00606 583 SKE-------INQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLFDVCGSQDE-ESDLERLKEEIEKSSKQ 654
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 845 SKLaLQQLQAQMEDYKEKARKE------VADAQRQAKDWASEAEKNSGGLSRL-QDELQRLRQALQTSQAERDTARLDKE 917
Cdd:TIGR00606 655 RAM-LAGATAVYSQFITQLTDEnqsccpVCQRVFQTEAELQEFISDLQSKLRLaPDKLKSTESELKKKEKRRDEMLGLAP 733
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 918 LLAQRLQGLEQEA----ENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDR--VNRGRDQVDQLRTELMQERS 991
Cdd:TIGR00606 734 GRQSIIDLKEKEIpelrNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVtiMERFQMELKDVERKIAQQAA 813
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 992 ARQ----DLECDKISLERQNKDLKTRLASSEGFQKPSASLSQLEsQNQLLQERLQAEEREKTVLQST---NRKLERRVKE 1064
Cdd:TIGR00606 814 KLQgsdlDRTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQE-QIQHLKSKTNELKSEKLQIGTNlqrRQQFEEQLVE 892
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1065 LSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLEK 1134
Cdd:TIGR00606 893 LSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIEN 962
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
330-944 |
2.54e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 62.08 E-value: 2.54e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 330 EQMQPLGALAGQAELTRKMEELQKKLDEEVKK----RQKLEPSRVGLERQLEEKAEECHRLQELLERRKGEVQQSSKELQ 405
Cdd:PTZ00121 1299 EEKKKADEAKKKAEEAKKADEAKKKAEEAKKKadaaKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKK 1378
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 406 NMKLLLGQEEGLRHGLEAQVKELQLKLKHSQSPDSGKESLLKDLLDTRELLEEL-LEGKQRVEEQLRLRERELTALKGAL 484
Cdd:PTZ00121 1379 KADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKaDEAKKKAEEAKKADEAKKKAEEAKK 1458
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 485 KEEVASHDQEvehvrlqyQRDTEQLRRSMQDATQ-DHAALEAERQKMSSlvRELQRELEETSEETGHWQSMFQKNKEELR 563
Cdd:PTZ00121 1459 AEEAKKKAEE--------AKKADEAKKKAEEAKKaDEAKKKAEEAKKKA--DEAKKAAEAKKKADEAKKAEEAKKADEAK 1528
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 564 AT--KQELLQLRMEKEEMEEELGEKMEVLQ-----RDLEQARASTRDTHQVEELKKELRRTQGELKELQAEQQNQEVTGR 636
Cdd:PTZ00121 1529 KAeeAKKADEAKKAEEKKKADELKKAEELKkaeekKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMK 1608
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 637 HQNQVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRATVETTLRETQEENDEFR 716
Cdd:PTZ00121 1609 AEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEK 1688
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 717 RRILGLEQQLKEARGLAE--GGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEgnlaaAKRALEVRLDEAQRGlaRLGQ 794
Cdd:PTZ00121 1689 KAAEALKKEAEEAKKAEElkKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEED-----KKKAEEAKKDEEEKK--KIAH 1761
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 795 EQQALNRALEEEGKQREALrrSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQMEDYKE---KARKEVADAQ 871
Cdd:PTZ00121 1762 LKKEEEKKAEEIRKEKEAV--IEEELDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEGNLVINDSKEmedSAIKEVADSK 1839
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1614229687 872 RQAKDWASEAEKNSGGLSRLQDElqrlrqalqTSQAERDTARlDKELLAQRLQGLEQEAENKKRFQDDKARQL 944
Cdd:PTZ00121 1840 NMQLEEADAFEKHKFNKNNENGE---------DGNKEADFNK-EKDLKEDDEEEIEEADEIEKIDKDDIEREI 1902
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
609-1134 |
8.28e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 60.08 E-value: 8.28e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 609 ELKKELRRTQGELKELQAEQQNQEVTGRHQNQVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASE 688
Cdd:PRK03918 169 EVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELE 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 689 TeamvLGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARGLAEGGEAVEarlrdkvhRLEVEKQQLEEALNAAREEE 768
Cdd:PRK03918 249 S----LEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEYI--------KLSEFYEEYLDELREIEKRL 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 769 GNLAAAKRALEVRLDEAQRglarlgqeqqaLNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKeleqigddskla 848
Cdd:PRK03918 317 SRLEEEINGIEERIKELEE-----------KEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEE------------ 373
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 849 LQQLQAQMEDY-KEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQtsqaerdtaRLDKELLAQRLQGLE 927
Cdd:PRK03918 374 LERLKKRLTGLtPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIE---------ELKKAKGKCPVCGRE 444
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 928 QEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRdQVDQLRTELMQERSARQDLEcdKISLERQN 1007
Cdd:PRK03918 445 LTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKES-ELIKLKELAEQLKELEEKLK--KYNLEELE 521
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1008 KDLKTRLASSEGFQKPSASLSQLESQnqllQERLQAEEREKTVLQSTNRKLERRVKELSIQIddeRQHVNDQKDQLTLRV 1087
Cdd:PRK03918 522 KKAEEYEKLKEKLIKLKGEIKSLKKE----LEKLEELKKKLAELEKKLDELEEELAELLKEL---EELGFESVEELEERL 594
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|...
gi 1614229687 1088 KALKRQVDE------AEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLEK 1134
Cdd:PRK03918 595 KELEPFYNEylelkdAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRK 647
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
707-1152 |
1.99e-08 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 58.92 E-value: 1.99e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 707 ETQEENDEFRRRILGLEQQLKEARGLAEggeaVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRAL------EV 780
Cdd:PRK03918 142 ESDESREKVVRQILGLDDYENAYKNLGE----VIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREIneisseLP 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 781 RLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDSK---------LALQQ 851
Cdd:PRK03918 218 ELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKelkelkekaEEYIK 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 852 LQAQMEDYKEKARK----------EVADAQRQAKDwASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTAR-------- 913
Cdd:PRK03918 298 LSEFYEEYLDELREiekrlsrleeEINGIEERIKE-LEEKEERLEELKKKLKELEKRLEELEERHELYEEAKakkeeler 376
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 914 LDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNR----GRDQVDQLRTELMQE 989
Cdd:PRK03918 377 LKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKcpvcGRELTEEHRKELLEE 456
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 990 RSAR-QDLECDKISLERQNKDLKTRLASSEGFQKPSASLSQLESQNQLLQErlQAEEREKTVLQSTNRKLE--RRVKELS 1066
Cdd:PRK03918 457 YTAElKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKE--LEEKLKKYNLEELEKKAEeyEKLKEKL 534
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1067 IQIDDERQHVNDQKDqltlRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQ-HEVNEQLQARIKSLEKDAWRKASRSAA 1145
Cdd:PRK03918 535 IKLKGEIKSLKKELE----KLEELKKKLAELEKKLDELEEELAELLKELEELgFESVEELEERLKELEPFYNEYLELKDA 610
|
....*..
gi 1614229687 1146 ESALKQE 1152
Cdd:PRK03918 611 EKELERE 617
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
919-1133 |
2.23e-08 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 58.49 E-value: 2.23e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 919 LAQRLQGLEQEAENKKRFQDDkarQLKSLEEKVSRLEAELDE--EKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDL 996
Cdd:COG3206 162 LEQNLELRREEARKALEFLEE---QLPELRKELEEAEAALEEfrQKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEA 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 997 ECDKISLERQ---NKDLKTRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREktvLQSTNRKLERRVKELSIQIDDER 1073
Cdd:COG3206 239 EARLAALRAQlgsGPDALPELLQSPVIQQLRAQLAELEAELAELSARYTPNHPD---VIALRAQIAALRAQLQQEAQRIL 315
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1614229687 1074 QHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKA---QRELEEQHEVNEQLQARIKSLE 1133
Cdd:COG3206 316 ASLEAELEALQAREASLQAQLAQLEARLAELPELEAELrrlEREVEVARELYESLLQRLEEAR 378
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
463-1072 |
2.41e-08 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 58.59 E-value: 2.41e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 463 KQRVEEQLRLRERELTALKgalkEEVASHDQEVEHVRLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELE 542
Cdd:pfam15921 266 QDRIEQLISEHEVEITGLT----EKASSARSQANSIQSQLEIIQEQARNQNSMYMRQLSDLESTVSQLRSELREAKRMYE 341
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 543 ETSEETGHWQSMFQKNKEELRATKQELLQ---------------LRMEKEEMEEELGEKMEVLQRDLEQARASTRDTHQV 607
Cdd:pfam15921 342 DKIEELEKQLVLANSELTEARTERDQFSQesgnlddqlqklladLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRREL 421
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 608 EELKKELRRTQGELKELQAEQQNQevtgrhqnqvLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVAS 687
Cdd:pfam15921 422 DDRNMEVQRLEALLKAMKSECQGQ----------MERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTL 491
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 688 ETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARGLAEGGE------------AVEARLRDKVHR------ 749
Cdd:pfam15921 492 ESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEGDhlrnvqtecealKLQMAEKDKVIEilrqqi 571
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 750 ----------------LEVEKQQLEEALNAAREEEGNLAAAK-------RALEVRLDEAQRGLARLGQEQQALNRALEEE 806
Cdd:pfam15921 572 enmtqlvgqhgrtagaMQVEKAQLEKEINDRRLELQEFKILKdkkdakiRELEARVSDLELEKVKLVNAGSERLRAVKDI 651
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 807 GKQREAL-------RRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQMEDYKEKARK-EVAD--AQRQAKD 876
Cdd:pfam15921 652 KQERDQLlnevktsRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSmEGSDghAMKVAMG 731
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 877 WASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEA 956
Cdd:pfam15921 732 MQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANMEV 811
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 957 ELDEEKNTVELLTDRVNRGRDQVDQLRtelMQERSARQDLECDKISlerQNKDLKTRLASSEGFQKPSASLSQLESQNQL 1036
Cdd:pfam15921 812 ALDKASLQFAECQDIIQRQEQESVRLK---LQHTLDVKELQGPGYT---SNSSMKPRLLQPASFTRTHSNVPSSQSTASF 885
|
650 660 670
....*....|....*....|....*....|....*.
gi 1614229687 1037 LQERlqaEEREKTVLQSTNRKLERRVKELSIQIDDE 1072
Cdd:pfam15921 886 LSHH---SRKTNALKEDPTRDLKQLLQELRSVINEE 918
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
708-1066 |
3.29e-08 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 58.43 E-value: 3.29e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 708 TQEENDEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREeegNLAAAKRALevrldEAQR 787
Cdd:COG3096 276 HANERRELSERALELRRELFGARRQLAEEQYRLVEMARELEELSARESDLEQDYQAASD---HLNLVQTAL-----RQQE 347
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 788 GLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEqigdDSKLALQQLQAQMEDYKEkARKEV 867
Cdd:COG3096 348 KIERYQEDLEELTERLEEQEEVVEEAAEQLAEAEARLEAAEEEVDSLKSQLA----DYQQALDVQQTRAIQYQQ-AVQAL 422
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 868 ADAQRQAKDWASEAEKNSGGLSRLQDELQR-------LRQALQTSQAER-----------------------DTAR---- 913
Cdd:COG3096 423 EKARALCGLPDLTPENAEDYLAAFRAKEQQateevleLEQKLSVADAARrqfekayelvckiageversqawQTARellr 502
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 914 --LDKELLAQRLQGLEQ---EAENKKRFQDDKARQLKSLEEKVSR-------LEAELDEEKNTVELLTDRVNRGRDQVDQ 981
Cdd:COG3096 503 ryRSQQALAQRLQQLRAqlaELEQRLRQQQNAERLLEEFCQRIGQqldaaeeLEELLAELEAQLEELEEQAAEAVEQRSE 582
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 982 LRTELMQERSARQDLEcDKISLERQNKDLKTRLASSEGfqKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERR 1061
Cdd:COG3096 583 LRQQLEQLRARIKELA-ARAPAWLAAQDALERLREQSG--EALADSQEVTAAMQQLLEREREATVERDELAARKQALESQ 659
|
....*
gi 1614229687 1062 VKELS 1066
Cdd:COG3096 660 IERLS 664
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
507-991 |
3.33e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 58.13 E-value: 3.33e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 507 EQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEETGHWQSMFQKNKEELRATKQELLQLRMEKEEMEEELGEK 586
Cdd:PRK02224 254 ETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEEC 333
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 587 MEVLQRDLEQARASTRDTHQVEELKKELRRTQGELKELQAEQQNQEVTGRHQNQVLEKQLAALREE-ADRGRELEQQnlq 665
Cdd:PRK02224 334 RVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERfGDAPVDLGNA--- 410
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 666 lqktlqqlrqdceEASKAKVASETEAmvLGQRRATVETTLRETQEENDEFRR-----RILGLEQQLKE---ARGLAEGGE 737
Cdd:PRK02224 411 -------------EDFLEELREERDE--LREREAELEATLRTARERVEEAEAlleagKCPECGQPVEGsphVETIEEDRE 475
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 738 AVE------ARLRDKVHRLEVEKQQLEEALNAAREEEgNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQRE 811
Cdd:PRK02224 476 RVEeleaelEDLEEEVEEVEERLERAEDLVEAEDRIE-RLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAE 554
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 812 ALRRSKAELEEQKRLLNRTVDRLNKELEQIgDDSKLALQQLQAQMEDyKEKARKEVADAQRQAKDWaseAEKNSGGLSRL 891
Cdd:PRK02224 555 EKREAAAEAEEEAEEAREEVAELNSKLAEL-KERIESLERIRTLLAA-IADAEDEIERLREKREAL---AELNDERRERL 629
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 892 QDELQRLRQALQTSQAER-DTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEaELDEEKNTVELLTD 970
Cdd:PRK02224 630 AEKRERKRELEAEFDEARiEEAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEELE-ELRERREALENRVE 708
|
490 500
....*....|....*....|.
gi 1614229687 971 RVNRGRDQVDQLRTELMQERS 991
Cdd:PRK02224 709 ALEALYDEAEELESMYGDLRA 729
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
338-986 |
4.05e-08 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 57.77 E-value: 4.05e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 338 LAGQAELTRKMEELQKKLDEEVKKRQKLEPsrvgLERQLEEKAEEchrlqelLERRKGEVQQSSKELQNMKLLLGQEEGL 417
Cdd:PRK03918 185 IKRTENIEELIKEKEKELEEVLREINEISS----ELPELREELEK-------LEKEVKELEELKEEIEELEKELESLEGS 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 418 RHGLEAQVKELQLKLKhsqspdsGKESLLKDLldtrelleellegKQRVEEQLRLRERELTALK-GALKEEVASHDQEVE 496
Cdd:PRK03918 254 KRKLEEKIRELEERIE-------ELKKEIEEL-------------EEKVKELKELKEKAEEYIKlSEFYEEYLDELREIE 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 497 HVRLQYQRDTEQLRRSMQDATQDhaalEAERQKMSSLVRELQRELEETSEetghwqsmFQKNKEELRATKQELLQLRMEK 576
Cdd:PRK03918 314 KRLSRLEEEINGIEERIKELEEK----EERLEELKKKLKELEKRLEELEE--------RHELYEEAKAKKEELERLKKRL 381
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 577 EEMEEELgekmevLQRDLEqarastrdthQVEELKKELRRtqgELKELQAEQQNQEVTGRHQNQVLEKQLAALREEADRG 656
Cdd:PRK03918 382 TGLTPEK------LEKELE----------ELEKAKEEIEE---EISKITARIGELKKEIKELKKAIEELKKAKGKCPVCG 442
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 657 RELEqqnlqlqktlqqlrqdcEEASKAKVASETEAMvlgqrrATVETTLRETQEENDEFRRRILGLEQQLKEARGLaegg 736
Cdd:PRK03918 443 RELT-----------------EEHRKELLEEYTAEL------KRIEKELKEIEEKERKLRKELRELEKVLKKESEL---- 495
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 737 eaveARLRDKVHRLEvekqQLEEALNAAREEEgnLAAAKRALEvrldEAQRGLARLGQEQQALNRALEEEgkqrEALRRS 816
Cdd:PRK03918 496 ----IKLKELAEQLK----ELEEKLKKYNLEE--LEKKAEEYE----KLKEKLIKLKGEIKSLKKELEKL----EELKKK 557
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 817 KAELEEQKRLLNRTVDRLNKELEQIG----DDSKLALQQLQAQMEDYKE--KARKEVADAQRQAKDWASEAEKNSGGLSR 890
Cdd:PRK03918 558 LAELEKKLDELEEELAELLKELEELGfesvEELEERLKELEPFYNEYLElkDAEKELEREEKELKKLEEELDKAFEELAE 637
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 891 LQDELQRLR---QALQTSQAERDTARLDKEL--LAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEaELDEEKNTV 965
Cdd:PRK03918 638 TEKRLEELRkelEELEKKYSEEEYEELREEYleLSRELAGLRAELEELEKRREEIKKTLEKLKEELEERE-KAKKELEKL 716
|
650 660
....*....|....*....|.
gi 1614229687 966 ELLTDRVNRGRDQVDQLRTEL 986
Cdd:PRK03918 717 EKALERVEELREKVKKYKALL 737
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
794-1130 |
4.83e-08 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 57.34 E-value: 4.83e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 794 QEQQALNRALEEEGKQREalrRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKlalqqlqaQMEDYKEKARKEVADAQRQ 873
Cdd:TIGR04523 303 QKEQDWNKELKSELKNQE---KKLEEIQNQISQNNKIISQLNEQISQLKKELT--------NSESENSEKQRELEEKQNE 371
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 874 AKDWASEAEKNSGGLSRLQDELQRLRQALQtsQAERDTARLDKEL--LAQRLQGLEQEAENKKRFQDDKARQLKSLEEKV 951
Cdd:TIGR04523 372 IEKLKKENQSYKQEIKNLESQINDLESKIQ--NQEKLNQQKDEQIkkLQQEKELLEKEIERLKETIIKNNSEIKDLTNQD 449
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 952 SRLEAEL-------DEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKPS 1024
Cdd:TIGR04523 450 SVKELIIknldntrESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKL 529
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1025 AS--------LSQLESQNQLLQERLQAEEREKTV---------LQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLR- 1086
Cdd:TIGR04523 530 ESekkekeskISDLEDELNKDDFELKKENLEKEIdeknkeieeLKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKe 609
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 1614229687 1087 --VKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIK 1130
Cdd:TIGR04523 610 kkISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIK 655
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
534-956 |
8.96e-08 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 56.31 E-value: 8.96e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 534 VRELQRELEETSEETGHWQsmfqKNKEELRATKQELLQLRMEKEEMEEElgekmevlQRDLEQARASTRDTHQVEELKKE 613
Cdd:COG4717 73 LKELEEELKEAEEKEEEYA----ELQEELEELEEELEELEAELEELREE--------LEKLEKLLQLLPLYQELEALEAE 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 614 LRRTQGELKELQAEQQNQEvTGRHQNQVLEKQLAALREEADRgrELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMV 693
Cdd:COG4717 141 LAELPERLEELEERLEELR-ELEEELEELEAELAELQEELEE--LLEQLSLATEEELQDLAEELEELQQRLAELEEELEE 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 694 LGQRRATVETTLRETQEENDEFRRR---------------ILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLE 758
Cdd:COG4717 218 AQEELEELEEELEQLENELEAAALEerlkearlllliaaaLLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREK 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 759 EALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQkRLLNRTVDRLNKEL 838
Cdd:COG4717 298 ASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEE-LQLEELEQEIAALL 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 839 EQIGDDSKLALQQLQAQMEDYKE-KARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKE 917
Cdd:COG4717 377 AEAGVEDEEELRAALEQAEEYQElKEELEELEEQLEELLGELEELLEALDEEELEEELEELEEELEELEEELEELREELA 456
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 1614229687 918 LLAQRLQGLE--QEAENKKRFQDDKARQLKSLEEKVSRLEA 956
Cdd:COG4717 457 ELEAELEQLEedGELAELLQELEELKAELRELAEEWAALKL 497
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
696-1120 |
2.61e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 54.77 E-value: 2.61e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 696 QRRATVETTLRETQEENDEFRRRILGLEQQLkEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREeegnlaaaK 775
Cdd:COG4717 95 EELEELEEELEELEAELEELREELEKLEKLL-QLLPLYQELEALEAELAELPERLEELEERLEELRELEEE--------L 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 776 RALEVRLDEAQRGLARLGQEQQALNR-ALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQA 854
Cdd:COG4717 166 EELEAELAELQEELEELLEQLSLATEeELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERL 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 855 QMEDYKEKARKEVADAQRQAKDWASEAEKNSG--------------GLSRLQDELQRLRQALQTSQAERDTARLDKELLA 920
Cdd:COG4717 246 KEARLLLLIAAALLALLGLGGSLLSLILTIAGvlflvlgllallflLLAREKASLGKEAEELQALPALEELEEEELEELL 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 921 QRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQdlecdk 1000
Cdd:COG4717 326 AALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIAALLAEAGVEDEEELRAALEQAEEYQE------ 399
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1001 isLERQNKDLKTRLASSEGFQKPSA---SLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQidderqhvn 1077
Cdd:COG4717 400 --LKEELEELEEQLEELLGELEELLealDEEELEEELEELEEELEELEEELEELREELAELEAELEQLEED--------- 468
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 1614229687 1078 DQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHE 1120
Cdd:COG4717 469 GELAELLQELEELKAELRELAEEWAALKLALELLEEAREEYRE 511
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
524-1146 |
3.30e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 54.68 E-value: 3.30e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 524 EAERQKMSSLVRELQRELEETSEETghwqSMFQKNKEELRATKQELLQLRMEKEEMEEELgekmevlqRDLEQARASTRD 603
Cdd:PRK03918 199 EKELEEVLREINEISSELPELREEL----EKLEKEVKELEELKEEIEELEKELESLEGSK--------RKLEEKIRELEE 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 604 thQVEELKK---ELRRTQGELKELQAEQQNQEVTGRHQNQVLEKqLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEA 680
Cdd:PRK03918 267 --RIEELKKeieELEEKVKELKELKEKAEEYIKLSEFYEEYLDE-LREIEKRLSRLEEEINGIEERIKELEEKEERLEEL 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 681 SKAKVASETEAMVLGQRRATVETtLRETQEENDEFRRRILG-----LEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQ 755
Cdd:PRK03918 344 KKKLKELEKRLEELEERHELYEE-AKAKKEELERLKKRLTGltpekLEKELEELEKAKEEIEEEISKITARIGELKKEIK 422
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 756 QLEEALNAAREEEGNLAAAKRalevRLDEAQRGlarlgqeqqalnRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLN 835
Cdd:PRK03918 423 ELKKAIEELKKAKGKCPVCGR----ELTEEHRK------------ELLEEYTAELKRIEKELKEIEEKERKLRKELRELE 486
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 836 KELEQIGDDSKL--ALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLrQALQTSqaerdtar 913
Cdd:PRK03918 487 KVLKKESELIKLkeLAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKL-EELKKK-------- 557
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 914 ldKELLAQRLQGLEQE-AENKKRFQDDKARQLKSLEEKVSRLEaELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSA 992
Cdd:PRK03918 558 --LAELEKKLDELEEElAELLKELEELGFESVEELEERLKELE-PFYNEYLELKDAEKELEREEKELKKLEEELDKAFEE 634
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 993 RQDLECDKISLERQNKDLKtRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELsiqidde 1072
Cdd:PRK03918 635 LAETEKRLEELRKELEELE-KKYSEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEER------- 706
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1614229687 1073 rqhvndqkdqltlrvkalkrqvDEAEEEIERLdslrKKAQRELEEQHEVNEQLQArikSLEKDAWRKASRSAAE 1146
Cdd:PRK03918 707 ----------------------EKAKKELEKL----EKALERVEELREKVKKYKA---LLKERALSKVGEIASE 751
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
342-1134 |
5.54e-07 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 54.21 E-value: 5.54e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 342 AELTRKMEELQKKLDEEVKKRQKLEPSRVGLERQLEEKAEECHRLQELLERRKGEVQQSSKELQNMKLLLGQEEGLRH-- 419
Cdd:pfam02463 236 EERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEek 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 420 --GLEAQVKELQLKLKHSQSPDSGKESLLKDLLDTRELLEELLEGKQRVEEQLRLRERELTALKG----ALKEEVASHDQ 493
Cdd:pfam02463 316 lkESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKleseRLSSAAKLKEE 395
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 494 EVEHVRLQYQRDTEQLRRSMQDATqdhaALEAERQKMSSLVRELQRELEETSEEtghwQSMFQKNKEELRATKQELLQLR 573
Cdd:pfam02463 396 ELELKSEEEKEAQLLLELARQLED----LLKEEKKEELEILEEEEESIELKQGK----LTEEKEELEKQELKLLKDELEL 467
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 574 MEKEEMEEELGEKMEVLQRDLEQARAstrdthQVEELKKELRRTQGELKELQAEQQNQEVTGRHQNQVLEKQLAALREEA 653
Cdd:pfam02463 468 KKSEDLLKETQLVKLQEQLELLLSRQ------KLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENY 541
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 654 DRGRELEqqnlqlQKTLQQLRQDCEEASKAKVASETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARGLA 733
Cdd:pfam02463 542 KVAISTA------VIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEA 615
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 734 EGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREAL 813
Cdd:pfam02463 616 DEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEIL 695
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 814 RRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQMEDYKEKARKEVADAQRqakdwaSEAEKNSGGLSRLQD 893
Cdd:pfam02463 696 RRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEK------SRLKKEEKEEEKSEL 769
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 894 ELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVN 973
Cdd:pfam02463 770 SLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLE 849
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 974 RGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKpSASLSQLESQNQLLQERLQAEEREKTVLQS 1053
Cdd:pfam02463 850 KLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEE-KKELEEESQKLNLLEEKENEIEERIKEEAE 928
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1054 TNRKLERRVKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLE 1133
Cdd:pfam02463 929 ILLKYEEEPEELLLEEADEKEKEENNKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKKKLI 1008
|
.
gi 1614229687 1134 K 1134
Cdd:pfam02463 1009 R 1009
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
372-841 |
5.72e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 54.00 E-value: 5.72e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 372 LERQLEEKAEECHRLQ----ELLERRKGEVQQSSKELQNMKLLLGQEEGLRHGLEAQVKELQLKLKHSQSPDSGKESLLK 447
Cdd:COG4717 47 LLERLEKEADELFKPQgrkpELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQ 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 448 --DLLDTRELLEELLEGKQRVEEQLRLRERELTALKGALKEEVASHDQEVEHVRLQYQRDTEQLRRSMQDATQDHAALEA 525
Cdd:COG4717 127 llPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQ 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 526 ERQKMSSLVRELQRELEETSEETGHWQS--MFQKNKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQARASTRD 603
Cdd:COG4717 207 RLAELEEELEEAQEELEELEEELEQLENelEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLL 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 604 THQVEELKKELRRTQGELKELQAEQQNQEVTGRHQNQVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKA 683
Cdd:COG4717 287 ALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLE 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 684 KVASETEAMvLGQRRATVETTLRETQEENDEF---RRRILGLEQQLKEARG--LAEGGEAVEARLRDKVHRLEVEKQQLE 758
Cdd:COG4717 367 ELEQEIAAL-LAEAGVEDEEELRAALEQAEEYqelKEELEELEEQLEELLGelEELLEALDEEELEEELEELEEELEELE 445
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 759 EALNAAREEEGNLAAAKRALevrldEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEE-QKRLLNRTVDRLNKE 837
Cdd:COG4717 446 EELEELREELAELEAELEQL-----EEDGELAELLQELEELKAELRELAEEWAALKLALELLEEaREEYREERLPPVLER 520
|
....
gi 1614229687 838 LEQI 841
Cdd:COG4717 521 ASEY 524
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
789-1118 |
6.49e-07 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 53.87 E-value: 6.49e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 789 LARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQigddSKLALQQLQAQMEDYKEkARKEVA 868
Cdd:TIGR04523 147 IKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLK----LELLLSNLKKKIQKNKS-LESQIS 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 869 DAQRQAKDWASEAEKnsgglsrLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLE 948
Cdd:TIGR04523 222 ELKKQNNQLKDNIEK-------KQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLK 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 949 EKVSRLE------------AELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLAS 1016
Cdd:TIGR04523 295 SEISDLNnqkeqdwnkelkSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEK 374
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1017 -SEGFQKPSASLSQLESQNQLLQERLQAEEREKT-------VLQSTNRKLERRVKELSIQIDDERQHVNDQKDQ---LTL 1085
Cdd:TIGR04523 375 lKKENQSYKQEIKNLESQINDLESKIQNQEKLNQqkdeqikKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQdsvKEL 454
|
330 340 350
....*....|....*....|....*....|...
gi 1614229687 1086 RVKALKRQVDEAEEEIERLDSLRKKAQRELEEQ 1118
Cdd:TIGR04523 455 IIKNLDNTRESLETQLKVLSRSINKIKQNLEQK 487
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
727-1148 |
1.32e-06 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 53.04 E-value: 1.32e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 727 KEARGLAEGGEAVEARLRDKVHRLEVEKQQLEE---ALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQA----- 798
Cdd:PRK04863 279 NERRVHLEEALELRRELYTSRRQLAAEQYRLVEmarELAELNEAESDLEQDYQAASDHLNLVQTALRQQEKIERYqadle 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 799 -LNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLnkeleqigddsklalqqlQAQMEDYKEK--ARKEVADAQRQAK 875
Cdd:PRK04863 359 eLEERLEEQNEVVEEADEQQEENEARAEAAEEEVDEL------------------KSQLADYQQAldVQQTRAIQYQQAV 420
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 876 DWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDkelLAQRLQgleqEAENKKRfQDDKARQL-KSLEEKVSRL 954
Cdd:PRK04863 421 QALERAKQLCGLPDLTADNAEDWLEEFQAKEQEATEELLS---LEQKLS----VAQAAHS-QFEQAYQLvRKIAGEVSRS 492
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 955 EA-----ELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQdlecdkiSLERQNKDLKTRLASSEGFQkpsaslsQ 1029
Cdd:PRK04863 493 EAwdvarELLRRLREQRHLAEQLQQLRMRLSELEQRLRQQQRAER-------LLAEFCKRLGKNLDDEDELE-------Q 558
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1030 LESQNQLLQERLQAEEREKTVLQSTnrkLERRVKELSIQIDDERQHVnDQKDQLTLRVKALKRQVDEAEEEIERLDSLRK 1109
Cdd:PRK04863 559 LQEELEARLESLSESVSEARERRMA---LRQQLEQLQARIQRLAARA-PAWLAAQDALARLREQSGEEFEDSQDVTEYMQ 634
|
410 420 430
....*....|....*....|....*....|....*....
gi 1614229687 1110 KAQRELEEQHEVNEQLQARIKSLEKDAWRKASRSAAESA 1148
Cdd:PRK04863 635 QLLERERELTVERDELAARKQALDEEIERLSQPGGSEDP 673
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
600-965 |
1.38e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 52.76 E-value: 1.38e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 600 STRDTHQVEELKKELRRTQGELKELQAEQQNQEVTGRHQNQVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEE 679
Cdd:TIGR02169 669 SRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSS 748
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 680 ASKAKVASETEAMVLGQRRATVETTLRETQEENDEFRRRIL--GLEQQLKEARGLAEGGEAVEARLRD---KVHRLEVEK 754
Cdd:TIGR02169 749 LEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLShsRIPEIQAELSKLEEEVSRIEARLREieqKLNRLTLEK 828
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 755 QQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRL 834
Cdd:TIGR02169 829 EYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEEL 908
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 835 NKELEQIGDDSKLALQQLQAQMEDYKEKARKEVADaqrqakdwaSEAEKNSGGLSRLQDELQRLRQALQTsqaerdtarl 914
Cdd:TIGR02169 909 EAQIEKKRKRLSELKAKLEALEEELSEIEDPKGED---------EEIPEEELSLEDVQAELQRVEEEIRA---------- 969
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 1614229687 915 dkeLLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLE--AELDEEKNTV 965
Cdd:TIGR02169 970 ---LEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILEriEEYEKKKREV 1019
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
330-988 |
1.53e-06 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 52.66 E-value: 1.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 330 EQMQPLGALAGQAELTRKMEELQKKLDEEVKKRQKLEPSRVGLERQLEEKAEECHRL-----QELLERRKGEVQQSSKEL 404
Cdd:TIGR00618 237 QTQQSHAYLTQKREAQEEQLKKQQLLKQLRARIEELRAQEAVLEETQERINRARKAAplaahIKAVTQIEQQAQRIHTEL 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 405 QNMKLLLGQEEGLRHGLEAQVKELQLKLKHSQSPDSgKESLLKDLLDTRELLEELLEGKQRVEEQLRLRERELTALKGAL 484
Cdd:TIGR00618 317 QSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHS-QEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKL 395
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 485 KEEVASHDQEVEHVRLQYQRDTEQlRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEETGHWQSMFQKNKE--EL 562
Cdd:TIGR00618 396 QSLCKELDILQREQATIDTRTSAF-RDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEreQQ 474
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 563 RATKQELLQLRMEKEEMEEELGEKMEVLQRDL-EQARASTRDTHQVEELKKELRRTQGELKELQAEQQNQEVTgRHQNQV 641
Cdd:TIGR00618 475 LQTKEQIHLQETRKKAVVLARLLELQEEPCPLcGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSEEDV-YHQLTS 553
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 642 LEKQLAALREEADRGREleqqnlqlqktlqqlrqdcEEASKAKVASETEAMVLGQRRATVEttLRETQEENDEFRRRILG 721
Cdd:TIGR00618 554 ERKQRASLKEQMQEIQQ-------------------SFSILTQCDNRSKEDIPNLQNITVR--LQDLTEKLSEAEDMLAC 612
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 722 LEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLE-EALNAAREEEGNLAAAKRALEvrldeaqrglARLGQEQQALN 800
Cdd:TIGR00618 613 EQHALLRKLQPEQDLQDVRLHLQQCSQELALKLTALHaLQLTLTQERVREHALSIRVLP----------KELLASRQLAL 682
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 801 RALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDWASE 880
Cdd:TIGR00618 683 QKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEA 762
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 881 AEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDE 960
Cdd:TIGR00618 763 HFNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSA 842
|
650 660
....*....|....*....|....*...
gi 1614229687 961 EKNTVELLTDRVNRGRDQVDQLRTELMQ 988
Cdd:TIGR00618 843 TLGEITHQLLKYEECSKQLAQLTQEQAK 870
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
424-1066 |
1.58e-06 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 52.53 E-value: 1.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 424 QVKELQLKLKHSQSPDSGKESLLKDLLDTRELleelleGKQRVEEQLRLRERELTALKGALKEEVASHDQEVEHVRLQYQ 503
Cdd:pfam12128 252 TLESAELRLSHLHFGYKSDETLIASRQEERQE------TSAELNQLLRTLDDQWKEKRDELNGELSAADAAVAKDRSELE 325
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 504 RDTEQLRRsMQDATQDHAALEAE-----RQKMSSLVRELQRELEETSEETGHWQSMFQKNKEELratKQELLQLRMEKEE 578
Cdd:pfam12128 326 ALEDQHGA-FLDADIETAAADQEqlpswQSELENLEERLKALTGKHQDVTAKYNRRRSKIKEQN---NRDIAGIKDKLAK 401
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 579 MEEELGEKMEVLQRDLEQARASTRDTH-----QVEELKKELRRTQGELKELQAEQQ--NQEVTGRHQNQVL-----EKQL 646
Cdd:pfam12128 402 IREARDRQLAVAEDDLQALESELREQLeagklEFNEEEYRLKSRLGELKLRLNQATatPELLLQLENFDERierarEEQE 481
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 647 AALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQL 726
Cdd:pfam12128 482 AANAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQLFPQAGTLLHFLRKEAPDWEQSIGKVISPELLH 561
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 727 K-----EARGLAEGGEAVEARLRDKVHRLEV------------EKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGL 789
Cdd:pfam12128 562 RtdldpEVWDGSVGGELNLYGVKLDLKRIDVpewaaseeelreRLDKAEEALQSAREKQAAAEEQLVQANGELEKASREE 641
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 790 --ARLGQEQQALNRALEEEGKQREALRRSKAeLEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQMEDY---KEKAR 864
Cdd:pfam12128 642 tfARTALKNARLDLRRLFDEKQSEKDKKNKA-LAERKDSANERLNSLEAQLKQLDKKHQAWLEEQKEQKREArteKQAYW 720
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 865 KEVA---DAQRQAKDWASEAEKnsgglSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQDDKA 941
Cdd:pfam12128 721 QVVEgalDAQLALLKAAIAARR-----SGAKAELKALETWYKRDLASLGVDPDVIAKLKREIRTLERKIERIAVRRQEVL 795
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 942 RQLKSLEEKVS----RLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASS 1017
Cdd:pfam12128 796 RYFDWYQETWLqrrpRLATQLSNIERAISELQQQLARLIADTKLRRAKLEMERKASEKQQVRLSENLRGLRCEMSKLATL 875
|
650 660 670 680
....*....|....*....|....*....|....*....|....*....
gi 1614229687 1018 EGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELS 1066
Cdd:pfam12128 876 KEDANSEQAQGSIGERLAQLEDLKLKRDYLSESVKKYVEHFKNVIADHS 924
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
596-825 |
2.33e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 51.30 E-value: 2.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 596 QARASTRDTHQVEELKKELRRTQGELKELQAEQQNQEVTGRHQNQVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQ 675
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 676 DcEEASKAKVASETEAMVLGQRRATVETTLRetQEENDEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQ 755
Cdd:COG4942 98 E-LEAQKEELAELLRALYRLGRQPPLALLLS--PEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERA 174
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 756 QLEEALNAAREEegnlaaaKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKR 825
Cdd:COG4942 175 ELEALLAELEEE-------RAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAA 237
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
809-1118 |
3.90e-06 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 51.45 E-value: 3.90e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 809 QREALRRSKAELEEQKRLlnrtVDRLNKELEQIG--DDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSG 886
Cdd:PRK11281 44 QLDALNKQKLLEAEDKLV----QQDLEQTLALLDkiDRQKEETEQLKQQLAQAPAKLRQAQAELEALKDDNDEETRETLS 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 887 GLS--RLQDELQRLRQALQTSQAERDTARldkellaqrlqgleqeaenkkrfqddkaRQLKSLEEKVSRLEAELDEEKNT 964
Cdd:PRK11281 120 TLSlrQLESRLAQTLDQLQNAQNDLAEYN----------------------------SQLVSLQTQPERAQAALYANSQR 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 965 VELLTDRVNRGRDQVDQLRTELMQERSARQDLecdkisLERQNKDLKTRLASSEGFQK--------PSASLSQLESQNQL 1036
Cdd:PRK11281 172 LQQIRNLLKGGKVGGKALRPSQRVLLQAEQAL------LNAQNDLQRKSLEGNTQLQDllqkqrdyLTARIQRLEHQLQL 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1037 LQERLQA---EEREKTVLQSTNRKLERR-------VKELSI--QIDDERQHVNDQKDQLT---LRVKalkrqvdeaeeei 1101
Cdd:PRK11281 246 LQEAINSkrlTLSEKTVQEAQSQDEAARiqanplvAQELEInlQLSQRLLKATEKLNTLTqqnLRVK------------- 312
|
330
....*....|....*..
gi 1614229687 1102 ERLDSLrKKAQRELEEQ 1118
Cdd:PRK11281 313 NWLDRL-TQSERNIKEQ 328
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
315-823 |
4.48e-06 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 51.22 E-value: 4.48e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 315 SESEASVRRKVSLVLEQMQPLGALAGQ-AELTRKMEELQKKLDEEVKKRQKLEPSRVGLERQLEEKAEECHRLQEL---- 389
Cdd:PRK03918 213 SSELPELREELEKLEKEVKELEELKEEiEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELkeka 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 390 --LERRKGEVQQSSKELQNMKLLLGQEEGLRHGLEAQVKELQLKLKHSQSPDSGKESLLKDLLDTRELLEELLEGKQRVE 467
Cdd:PRK03918 293 eeYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKE 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 468 EQLRLRERELTALKGALKEEVASHDQEVEHVRLQYQRDTEQLRRSMQDATQDHAA---LEAERQKMSSLVRELQRE---- 540
Cdd:PRK03918 373 ELERLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAieeLKKAKGKCPVCGRELTEEhrke 452
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 541 -LEETSEETGHWQSMFQKNKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQARASTRDTHQVEELKKELRRTQG 619
Cdd:PRK03918 453 lLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKE 532
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 620 ELKELQAEQQNQEVTGRHQNQvLEKQLAALREEADrgrELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRA 699
Cdd:PRK03918 533 KLIKLKGEIKSLKKELEKLEE-LKKKLAELEKKLD---ELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELK 608
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 700 TVETTLRETQEENDEfrrrilgLEQQLKEARGLAEGGEAVEARLRDKVHRLEV-----EKQQLEEALNAAREEEGNLAAA 774
Cdd:PRK03918 609 DAEKELEREEKELKK-------LEEELDKAFEELAETEKRLEELRKELEELEKkyseeEYEELREEYLELSRELAGLRAE 681
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 1614229687 775 KRALEVRLDEAQRGLARLGQEQQA----------LNRALEEEGKQREALRRSKAELEEQ 823
Cdd:PRK03918 682 LEELEKRREEIKKTLEKLKEELEErekakkelekLEKALERVEELREKVKKYKALLKER 740
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
464-929 |
4.71e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 50.92 E-value: 4.71e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 464 QRVEEQLRLRERELTALKgALKEEVASHDQEVEHVRLQYQRDTEQLRRsmQDATQDHAALEAERQKMSSLVRELQRELEE 543
Cdd:COG4717 74 KELEEELKEAEEKEEEYA-ELQEELEELEEELEELEAELEELREELEK--LEKLLQLLPLYQELEALEAELAELPERLEE 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 544 TSEETGHWQSMfqknKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQARASTRDthQVEELKKELRRTQGELKE 623
Cdd:COG4717 151 LEERLEELREL----EEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQ--RLAELEEELEEAQEELEE 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 624 LQAEQQNQEVTGRHQnqvlekqlaalrEEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRATVET 703
Cdd:COG4717 225 LEEELEQLENELEAA------------ALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLL 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 704 TLRETQEENDEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGnlAAAKRALEVRLD 783
Cdd:COG4717 293 LAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEE--LEEELQLEELEQ 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 784 EAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQkrLLNRTVDRLNKELEQIGDDSKLALQQLQAQMEDYKEK- 862
Cdd:COG4717 371 EIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQ--LEELLGELEELLEALDEEELEEELEELEEELEELEEEl 448
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1614229687 863 --ARKEVADAQRQAKDWASEAEknsggLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQE 929
Cdd:COG4717 449 eeLREELAELEAELEQLEEDGE-----LAELLQELEELKAELRELAEEWAALKLALELLEEAREEYREE 512
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
646-914 |
5.78e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.15 E-value: 5.78e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 646 LAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQ 725
Cdd:COG4942 12 ALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKE 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 726 LKEARGlaeggeavearlrdkvhRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEE 805
Cdd:COG4942 92 IAELRA-----------------ELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEE 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 806 EGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQigddsklaLQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNS 885
Cdd:COG4942 155 LRADLAELAALRAELEAERAELEALLAELEEERAA--------LEALKAERQKLLARLEKELAELAAELAELQQEAEELE 226
|
250 260
....*....|....*....|....*....
gi 1614229687 886 GGLSRLQDELQRLRQALQTSQAERDTARL 914
Cdd:COG4942 227 ALIARLEAEAAAAAERTPAAGFAALKGKL 255
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
1042-1158 |
6.31e-06 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 50.24 E-value: 6.31e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1042 QAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQ---LTLRVKALKRQVDE---AEEEIERLDSLRKKAQREL 1115
Cdd:COG2433 402 EHEERELTEEEEEIRRLEEQVERLEAEVEELEAELEEKDERierLERELSEARSEERReirKDREISRLDREIERLEREL 481
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1614229687 1116 EEQHEVNEQLQARIKSLeKDAWRKASRSAAESALKQEGLSSDE 1158
Cdd:COG2433 482 EEERERIEELKRKLERL-KELWKLEHSGELVPVKVVEKFTKEA 523
|
|
| MutS2 |
COG1193 |
dsDNA-specific endonuclease/ATPase MutS2 [Replication, recombination and repair]; |
791-934 |
7.90e-06 |
|
dsDNA-specific endonuclease/ATPase MutS2 [Replication, recombination and repair];
Pssm-ID: 440806 [Multi-domain] Cd Length: 784 Bit Score: 50.14 E-value: 7.90e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 791 RLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIgddsKLALQQLQAQMEDYKEKARKEVADA 870
Cdd:COG1193 494 RLGLPEEIIERARELLGEESIDVEKLIEELERERRELEEEREEAERLREEL----EKLREELEEKLEELEEEKEEILEKA 569
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1614229687 871 QRQAKDWASEAEKnsgglsrlqdELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKK 934
Cdd:COG1193 570 REEAEEILREARK----------EAEELIRELREAQAEEEELKEARKKLEELKQELEEKLEKPK 623
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
848-1106 |
8.43e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 50.30 E-value: 8.43e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 848 ALQQLQAQMEDYKEkARKEVADAQRQAKDWAseaeknsgGLSRLQDELQRLRQALQTSQAERDTARLDKEllAQRLQGLE 927
Cdd:COG4913 226 AADALVEHFDDLER-AHEALEDAREQIELLE--------PIRELAERYAAARERLAELEYLRAALRLWFA--QRRLELLE 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 928 QEAENkkrfqddkarqlksLEEKVSRLEAELDEekntvelLTDRVNRGRDQVDQLRTELMQerSARQDLEcdkiSLERQN 1007
Cdd:COG4913 295 AELEE--------------LRAELARLEAELER-------LEARLDALREELDELEAQIRG--NGGDRLE----QLEREI 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1008 KDLKTRLASSEgfqkpsASLSQLESQNQLLQERLQAEEREKTVLQstnrkleRRVKELSIQIDDERQHVNDQKDQLTLRV 1087
Cdd:COG4913 348 ERLERELEERE------RRRARLEALLAALGLPLPASAEEFAALR-------AEAAALLEALEEELEALEEALAEAEAAL 414
|
250
....*....|....*....
gi 1614229687 1088 KALKRQVDEAEEEIERLDS 1106
Cdd:COG4913 415 RDLRRELRELEAEIASLER 433
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
757-1153 |
1.42e-05 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 49.12 E-value: 1.42e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 757 LEEALNAAREEEGNLAAAKRA--LEVRLDEAQRGLARLGQEQQALNRALEEEgkqREALRRSKAELEEQKRLLNRTVDRL 834
Cdd:pfam07888 9 LEEESHGEEGGTDMLLVVPRAelLQNRLEECLQERAELLQAQEAANRQREKE---KERYKRDREQWERQRRELESRVAEL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 835 NKELEQIGDD-SKLALQQLQAQMEDYKEKARKEVADAQRQA------------KDWASEAEKNSGGLSRLQDELQRLRQA 901
Cdd:pfam07888 86 KEELRQSREKhEELEEKYKELSASSEELSEEKDALLAQRAAhearireleediKTLTQRVLERETELERMKERAKKAGAQ 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 902 LQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRL----------EAELDEEKNTVELLTDR 971
Cdd:pfam07888 166 RKEEEAERKQLQAKLQQTEEELRSLSKEFQELRNSLAQRDTQVLQLQDTITTLtqklttahrkEAENEALLEELRSLQER 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 972 VNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASsegfqkpsASLSQLESQNQLLQER---LQAEEREK 1048
Cdd:pfam07888 246 LNASERKVEGLGEELSSMAAQRDRTQAELHQARLQAAQLTLQLAD--------ASLALREGRARWAQERetlQQSAEADK 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1049 TVLQSTNRKLERRVKELSiqidDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQAR 1128
Cdd:pfam07888 318 DRIEKLSAELQRLEERLQ----EERMEREKLEVELGREKDCNRVQLSESRRELQELKASLRVAQKEKEQLQAEKQELLEY 393
|
410 420
....*....|....*....|....*
gi 1614229687 1129 IKSLEKDAWRKASRSAAESALKQEG 1153
Cdd:pfam07888 394 IRQLEQRLETVADAKWSEAALTSTE 418
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
556-916 |
1.70e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 49.14 E-value: 1.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 556 QKNKEELRATKQELLQLRmekeemeeelgekmevlqRDLEQARASTRDTHQVEELKKELRRTQGELKELQAEQQNQEVTG 635
Cdd:COG4913 606 FDNRAKLAALEAELAELE------------------EELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASAE 667
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 636 RHQNQvLEKQLAALREEADRGRELEQQNLQLQKTLqqlrqdcEEASKAKVASETEAMVLGQRRATVETTLRETQEENDEF 715
Cdd:COG4913 668 REIAE-LEAELERLDASSDDLAALEEQLEELEAEL-------EELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAA 739
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 716 RRRILGLEQQLKEARGLAEGGEAVEARLRDkvhRLEVEKQQLEEALNAAREE-EGNLAAAKRALEVRLDEAQRGLARLGq 794
Cdd:COG4913 740 EDLARLELRALLEERFAAALGDAVERELRE---NLEERIDALRARLNRAEEElERAMRAFNREWPAETADLDADLESLP- 815
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 795 EQQALNRALEEEG------KQREALRRS--------KAELEEQKRLLNRTVDRLNKELEQI--GDDSKLALqqlqaqmeD 858
Cdd:COG4913 816 EYLALLDRLEEDGlpeyeeRFKELLNENsiefvadlLSKLRRAIREIKERIDPLNDSLKRIpfGPGRYLRL--------E 887
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1614229687 859 YKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQ-DELQRLRQALQTSQAERDTARLDK 916
Cdd:COG4913 888 ARPRPDPEVREFRQELRAVTSGASLFDEELSEARfAALKRLIERLRSEEEESDRRWRAR 946
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
854-1143 |
2.07e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 48.91 E-value: 2.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 854 AQMEDYKEKARKEVAdaqrqakdwasEAEKNSGGLSRLQDELqrlRQALQTSQAERDTARLDKELLAQRlqgleQEAENK 933
Cdd:TIGR02169 166 AEFDRKKEKALEELE-----------EVEENIERLDLIIDEK---RQQLERLRREREKAERYQALLKEK-----REYEGY 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 934 KRFQDDKA--RQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQdlecdkISLERQNKDLK 1011
Cdd:TIGR02169 227 ELLKEKEAleRQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQ------LRVKEKIGELE 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1012 TRLASSEGfqkpsaSLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIqidderqhvndQKDQLTLRVKALK 1091
Cdd:TIGR02169 301 AEIASLER------SIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERK-----------RRDKLTEEYAELK 363
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1614229687 1092 RQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKDAWRKASRS 1143
Cdd:TIGR02169 364 EELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEEL 415
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
694-918 |
2.17e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 48.86 E-value: 2.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 694 LGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARgLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAA 773
Cdd:COG3206 166 LELRREEARKALEFLEEQLPELRKELEEAEAALEEFR-QKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAA 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 774 AKRALEVRLDEAQR-----GLARLGQEQQALNRALEEE----GKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDD 844
Cdd:COG3206 245 LRAQLGSGPDALPEllqspVIQQLRAQLAELEAELAELsaryTPNHPDVIALRAQIAALRAQLQQEAQRILASLEAELEA 324
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1614229687 845 SKLALQQLQAQMEDYKEKArKEVADAQRQakdwaseaeknsggLSRLQDELQRLRQALQTSQAERDTARLDKEL 918
Cdd:COG3206 325 LQAREASLQAQLAQLEARL-AELPELEAE--------------LRRLEREVEVARELYESLLQRLEEARLAEAL 383
|
|
| EmrA |
COG1566 |
Multidrug resistance efflux pump EmrA [Defense mechanisms]; |
843-969 |
2.74e-05 |
|
Multidrug resistance efflux pump EmrA [Defense mechanisms];
Pssm-ID: 441174 [Multi-domain] Cd Length: 331 Bit Score: 47.74 E-value: 2.74e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 843 DDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSG--GLSRLQDELQRLRQALQ---TSQAERDTARLDKE 917
Cdd:COG1566 79 TDLQAALAQAEAQLAAAEAQLARLEAELGAEAEIAAAEAQLAAAqaQLDLAQRELERYQALYKkgaVSQQELDEARAALD 158
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 1614229687 918 LLAQRLQGLEQEAENKKRfQDDKARQLKSLEEKVSRLEAELDEEKNTVELLT 969
Cdd:COG1566 159 AAQAQLEAAQAQLAQAQA-GLREEEELAAAQAQVAQAEAALAQAELNLARTT 209
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
813-1135 |
2.77e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 48.48 E-value: 2.77e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 813 LRRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKlALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQ 892
Cdd:TIGR04523 129 LEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYN-DLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLK 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 893 DELQRLRQalqtsqaerdtarLDKEL--LAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTD 970
Cdd:TIGR04523 208 KKIQKNKS-------------LESQIseLKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQK 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 971 RVNRGRDQVDQLRTELMQERSARQDLECDKIslERQNKDLKTRLASSEgfQKPSASLSQLESQNQL---LQERLQAEERE 1047
Cdd:TIGR04523 275 ELEQNNKKIKELEKQLNQLKSEISDLNNQKE--QDWNKELKSELKNQE--KKLEEIQNQISQNNKIisqLNEQISQLKKE 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1048 KTVLQSTNRKLERRVKELSIQIDD---ERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRE---LEEQHE- 1120
Cdd:TIGR04523 351 LTNSESENSEKQRELEEKQNEIEKlkkENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEkelLEKEIEr 430
|
330
....*....|....*...
gi 1614229687 1121 ---VNEQLQARIKSLEKD 1135
Cdd:TIGR04523 431 lkeTIIKNNSEIKDLTNQ 448
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
394-1139 |
2.81e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 48.43 E-value: 2.81e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 394 KGEVQQSSKELQNMKLLLGQEEGLRHG----LEAQVKELQLKLKHSQSPDSGKESLLKdLLDTRELLEELLEGKQRVEEQ 469
Cdd:TIGR00618 193 HGKAELLTLRSQLLTLCTPCMPDTYHErkqvLEKELKHLREALQQTQQSHAYLTQKRE-AQEEQLKKQQLLKQLRARIEE 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 470 LRLRERELTALKGAL-----KEEVASHDQEVEHVRLQYQRDTEQLRRSMQDATQ------DHAALEAERQKMSSLVRELQ 538
Cdd:TIGR00618 272 LRAQEAVLEETQERInrarkAAPLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKllmkraAHVKQQSSIEEQRRLLQTLH 351
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 539 RELEETSEETGHwQSMFQKNKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDleqarasTRDTHQVEELKKELRRTQ 618
Cdd:TIGR00618 352 SQEIHIRDAHEV-ATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDIL-------QREQATIDTRTSAFRDLQ 423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 619 GELKELQAEQQNQEVTGRHQNQVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKvaseteamvlgqrr 698
Cdd:TIGR00618 424 GQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETRKK-------------- 489
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 699 ATVETTLRETQEENDEFRRRILGLEQQLKEArGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEegnlaaaKRAL 778
Cdd:TIGR00618 490 AVVLARLLELQEEPCPLCGSCIHPNPARQDI-DNPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQ-------RASL 561
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 779 EVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQMED 858
Cdd:TIGR00618 562 KEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQQCSQEL 641
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 859 YKEKARKEvadaqRQAKDWASEAEKNSGGLSRLQDElqrlrQALQTSQAERDTARLDKELLAQRLQGLEQEAEnkkrfqd 938
Cdd:TIGR00618 642 ALKLTALH-----ALQLTLTQERVREHALSIRVLPK-----ELLASRQLALQKMQSEKEQLTYWKEMLAQCQT------- 704
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 939 dkarQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQErsarQDLECDKISLERQNKDLKTRLASSE 1018
Cdd:TIGR00618 705 ----LLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQ----ARTVLKARTEAHFNNNEEVTAALQT 776
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1019 GfQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAE 1098
Cdd:TIGR00618 777 G-AELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYE 855
|
730 740 750 760
....*....|....*....|....*....|....*....|.
gi 1614229687 1099 EEIERLDSLRKKaQRELEEQHEVNEQLQARIKSLEKDAWRK 1139
Cdd:TIGR00618 856 ECSKQLAQLTQE-QAKIIQLSDKLNGINQIKIQFDGDALIK 895
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
462-837 |
3.47e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 48.14 E-value: 3.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 462 GKQRVEEQLRLRERELTALKGALKEEVASHDQEVEHVrlqyQRDTEQLRRSMQDATQDHAALEAERQkmsslvrELQREL 541
Cdd:TIGR02169 664 GGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRI----ENRLDELSQELSDASRKIGEIEKEIE-------QLEQEE 732
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 542 EETSEETGHWQSMFQKNKEELRATKQELLQLRMEKEEMEeelgekmevlqRDLEQARASTRDTHQvEELKKELRRTQGEL 621
Cdd:TIGR02169 733 EKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELE-----------EDLHKLEEALNDLEA-RLSHSRIPEIQAEL 800
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 622 KELQAEQQNQEVTGRHQNQVLEKqLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASeteamvLGQRRATV 701
Cdd:TIGR02169 801 SKLEEEVSRIEARLREIEQKLNR-LTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEE------LEEELEEL 873
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 702 ETTLRETQEENDEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLE------EALNAAREEEGNLAAAK 775
Cdd:TIGR02169 874 EAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEeelseiEDPKGEDEEIPEEELSL 953
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1614229687 776 RALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKE 837
Cdd:TIGR02169 954 EDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEKK 1015
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
468-1110 |
3.58e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 48.30 E-value: 3.58e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 468 EQLRLRERELTALKGALKEEVASHDQEVEHVRLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEE 547
Cdd:pfam12128 251 NTLESAELRLSHLHFGYKSDETLIASRQEERQETSAELNQLLRTLDDQWKEKRDELNGELSAADAAVAKDRSELEALEDQ 330
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 548 TGhwqsMFQKNKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQArASTRDTHQVEELKKELRRTQGELKELQAE 627
Cdd:pfam12128 331 HG----AFLDADIETAAADQEQLPSWQSELENLEERLKALTGKHQDVTAK-YNRRRSKIKEQNNRDIAGIKDKLAKIREA 405
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 628 QQNQEVTGRHQNQVLEKQL-----AALREEADRGRELEQQNLQLQKTLQQLRQDCEE-ASKAKVASETEAM--VLGQRRA 699
Cdd:pfam12128 406 RDRQLAVAEDDLQALESELreqleAGKLEFNEEEYRLKSRLGELKLRLNQATATPELlLQLENFDERIERAreEQEAANA 485
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 700 TVE------TTLRETQEENDEFRRRILGLEQQLKEArgLAEGGEAVEARLRDKVHRLEVEKQQLEEALN--AARE----- 766
Cdd:pfam12128 486 EVErlqselRQARKRRDQASEALRQASRRLEERQSA--LDELELQLFPQAGTLLHFLRKEAPDWEQSIGkvISPEllhrt 563
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 767 ------EEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELE- 839
Cdd:pfam12128 564 dldpevWDGSVGGELNLYGVKLDLKRIDVPEWAASEEELRERLDKAEEALQSAREKQAAAEEQLVQANGELEKASREETf 643
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 840 --QIGDDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSR-LQDELQRLRQALQTSQAERDTARLD- 915
Cdd:pfam12128 644 arTALKNARLDLRRLFDEKQSEKDKKNKALAERKDSANERLNSLEAQLKQLDKkHQAWLEEQKEQKREARTEKQAYWQVv 723
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 916 ----KELLAQRLQGLEQEAENKKRFQD----DKARQLKSL---EEKVSRLEAELDEEKNTVElltdRVNRGRDQVDQLRt 984
Cdd:pfam12128 724 egalDAQLALLKAAIAARRSGAKAELKaletWYKRDLASLgvdPDVIAKLKREIRTLERKIE----RIAVRRQEVLRYF- 798
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 985 ELMQER--SARQDLECDKISLERQNKDLKTRLASSEgfQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLER-R 1061
Cdd:pfam12128 799 DWYQETwlQRRPRLATQLSNIERAISELQQQLARLI--ADTKLRRAKLEMERKASEKQQVRLSENLRGLRCEMSKLATlK 876
|
650 660 670 680
....*....|....*....|....*....|....*....|....*....
gi 1614229687 1062 VKELSIQIDDERQHVNDQKDQLTLRVKALKRQVdeaEEEIERLDSLRKK 1110
Cdd:pfam12128 877 EDANSEQAQGSIGERLAQLEDLKLKRDYLSESV---KKYVEHFKNVIAD 922
|
|
| Crescentin |
pfam19220 |
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament ... |
777-1148 |
3.79e-05 |
|
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament proteins, named crescentin, whose cytoskeletal function is required for the vibrioid and helical shapes of Caulobacter crescentus. Without crescentin, the cells adopt a straight-rod morphology. Crescentin has characteriztic features of IF proteins including the ability to assemble into filaments in vitro without energy or cofactor requirements. In vivo, crescentin forms a helical structure that colocalizes with the inner cell curvatures beneath the cytoplasmic membrane.
Pssm-ID: 437057 [Multi-domain] Cd Length: 401 Bit Score: 47.37 E-value: 3.79e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 777 ALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTV---DRLNKELEQIGDDSKLALQQLQ 853
Cdd:pfam19220 7 LLRVRLGEMADRLEDLRSLKADFSQLIEPIEAILRELPQAKSRLLELEALLAQERaayGKLRRELAGLTRRLSAAEGELE 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 854 A-------------QMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQtsQAERDTARLDKEL-- 918
Cdd:pfam19220 87 ElvarlakleaalrEAEAAKEELRIELRDKTAQAEALERQLAAETEQNRALEEENKALREEAQ--AAEKALQRAEGELat 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 919 LAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEkntvelltdrvnrgRDQVDQLRTELMQERSARQDLEC 998
Cdd:pfam19220 165 ARERLALLEQENRRLQALSEEQAAELAELTRRLAELETQLDAT--------------RARLRALEGQLAAEQAERERAEA 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 999 dkiSLERQNKDLKTRLASSEgfQKPSASLSQLESQNQLLQE-RLQAEEREKTVlqstnRKLERRVKELSIQIDD-ERQHV 1076
Cdd:pfam19220 231 ---QLEEAVEAHRAERASLR--MKLEALTARAAATEQLLAEaRNQLRDRDEAI-----RAAERRLKEASIERDTlERRLA 300
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1614229687 1077 NDQKD--QLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKDawRKASRSAAESA 1148
Cdd:pfam19220 301 GLEADleRRTQQFQEMQRARAELEERAEMLTKALAAKDAALERAEERIASLSDRIAELTKR--FEVERAALEQA 372
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
749-971 |
5.27e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 47.32 E-value: 5.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 749 RLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDE--AQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRL 826
Cdd:COG3206 165 NLELRREEARKALEFLEEQLPELRKELEEAEAALEEfrQKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAA 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 827 LNRTVDRLNKELEQIGDDSklALQQLQAQMEDykekARKEVADAQRQAKDwaseaekNSGGLSRLQDELQRLRQALQT-S 905
Cdd:COG3206 245 LRAQLGSGPDALPELLQSP--VIQQLRAQLAE----LEAELAELSARYTP-------NHPDVIALRAQIAALRAQLQQeA 311
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1614229687 906 QAERDTARLDKELLAQRLQGLEQEAENkkrfQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDR 971
Cdd:COG3206 312 QRILASLEAELEALQAREASLQAQLAQ----LEARLAELPELEAELRRLEREVEVARELYESLLQR 373
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
310-539 |
8.04e-05 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 46.97 E-value: 8.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 310 LREGSSESEASVRRKVSLVLEQMQPLGALAGQAE-LTRKMEELQKKLDEEVKKRQKLEPSRVGLERQLEEKAEECHRLQE 388
Cdd:TIGR02168 703 LRKELEELEEELEQLRKELEELSRQISALRKDLArLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEA 782
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 389 LLERRKGEVQQSSKELQNMKLLLGQEEGLRHGLEAQVKELQLKLKHSQSPDSGKESLLKDLLDTRELLEELLEGKQRVEE 468
Cdd:TIGR02168 783 EIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIE 862
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1614229687 469 QLRLRERELTALKGALKEEVASHDQEVEHVRLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQR 539
Cdd:TIGR02168 863 ELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEG 933
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
463-1128 |
8.95e-05 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 46.87 E-value: 8.95e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 463 KQRVEEQLRLRERELTALKGALkeevASHDQ--EVEHVR-LQYQRDTEQLRR----------SMQDATQDHAALEAERQK 529
Cdd:COG3096 377 LAEAEARLEAAEEEVDSLKSQL----ADYQQalDVQQTRaIQYQQAVQALEKaralcglpdlTPENAEDYLAAFRAKEQQ 452
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 530 MSSLVRELQRELEETSE-ETGHWQSM---------------FQKNKE------ELRATKQELLQLRMEKEEMEEELGEKM 587
Cdd:COG3096 453 ATEEVLELEQKLSVADAaRRQFEKAYelvckiageversqaWQTAREllrryrSQQALAQRLQQLRAQLAELEQRLRQQQ 532
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 588 EV--LQRDLEQARASTRDT-HQVEELKKELRRTQGELKELQAEQQNQEVTGRHQNQVLEKQLAALREEADRGRELEQQNL 664
Cdd:COG3096 533 NAerLLEEFCQRIGQQLDAaEELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRARIKELAARAPAWLAAQDALE 612
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 665 QLQKTLQQLRQDCEEASKAK---VASETEAMV----LGQRRATVETTLRETQEENDEFRRRILGLEQQLKeARGLAEGGE 737
Cdd:COG3096 613 RLREQSGEALADSQEVTAAMqqlLEREREATVerdeLAARKQALESQIERLSQPGGAEDPRLLALAERLG-GVLLSEIYD 691
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 738 AV--------EARLRDKVHRLEVEKQQLEEALNAAREE--------EGNLAAAKRALEVRLDEAQRGLARLGQEQ----- 796
Cdd:COG3096 692 DVtledapyfSALYGPARHAIVVPDLSAVKEQLAGLEDcpedlyliEGDPDSFDDSVFDAEELEDAVVVKLSDRQwrysr 771
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 797 ----QALNRALEEegKQREALRRSKAELEEQKRLLNRTVDRLNKeLEQigDDSKLALQQLQAQMEDYKEKARKEVADAQR 872
Cdd:COG3096 772 fpevPLFGRAARE--KRLEELRAERDELAEQYAKASFDVQKLQR-LHQ--AFSQFVGGHLAVAFAPDPEAELAALRQRRS 846
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 873 QAKDwaseaeknsgGLSRLQDELQRLRQALQTSQAERDTAR--------LDKELLAQRLQGLEQE---AENKKRFQDDKA 941
Cdd:COG3096 847 ELER----------ELAQHRAQEQQLRQQLDQLKEQLQLLNkllpqanlLADETLADRLEELREEldaAQEAQAFIQQHG 916
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 942 RQLKSLEEKVSRLE---AELDEEKNTVELLTDRVNRGRDQVDQLrTELMQERS--ARQDLECDKISLERQNKDLKTRLAS 1016
Cdd:COG3096 917 KALAQLEPLVAVLQsdpEQFEQLQADYLQAKEQQRRLKQQIFAL-SEVVQRRPhfSYEDAVGLLGENSDLNEKLRARLEQ 995
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1017 SEGFQKPS-----ASLSQLESQNQLLQErLQAEEREKtvlQSTNRKLERRVKELSIQIDDE--------RQHVNDQKDQL 1083
Cdd:COG3096 996 AEEARREAreqlrQAQAQYSQYNQVLAS-LKSSRDAK---QQTLQELEQELEELGVQADAEaeerarirRDELHEELSQN 1071
|
730 740 750 760
....*....|....*....|....*....|....*....|....*
gi 1614229687 1084 TLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQAR 1128
Cdd:COG3096 1072 RSRRSQLEKQLTRCEAEMDSLQKRLRKAERDYKQEREQVVQAKAG 1116
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
735-1134 |
9.37e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 47.04 E-value: 9.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 735 GGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEegkQREALR 814
Cdd:pfam15921 72 GKEHIERVLEEYSHQVKDLQRRLNESNELHEKQKFYLRQSVIDLQTKLQEMQMERDAMADIRRRESQSQED---LRNQLQ 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 815 RSKAELEEQKRLLNRTVDRLNKELEQIGD---DSKLALQQLQAQMEDYKEKARKEVADAQRQAK-DWASEAEKNSGGLSR 890
Cdd:pfam15921 149 NTVHELEAAKCLKEDMLEDSNTQIEQLRKmmlSHEGVLQEIRSILVDFEEASGKKIYEHDSMSTmHFRSLGSAISKILRE 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 891 LQDELQRLRQALQTSQAERDTARLDK----ELLAQ----RLQGLEQEAENKKRFQDDKARQLKSLEEKV-SRLEAELDEE 961
Cdd:pfam15921 229 LDTEISYLKGRIFPVEDQLEALKSESqnkiELLLQqhqdRIEQLISEHEVEITGLTEKASSARSQANSIqSQLEIIQEQA 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 962 KNTVELLTDRVNRGRDQVDQLRTELmqeRSARQDLECDKISLERQ----NKDLKTRLASSEGFQKPSASLsqlESQNQLL 1037
Cdd:pfam15921 309 RNQNSMYMRQLSDLESTVSQLRSEL---REAKRMYEDKIEELEKQlvlaNSELTEARTERDQFSQESGNL---DDQLQKL 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1038 QERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEE 1117
Cdd:pfam15921 383 LADLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMAAIQGKNESLEK 462
|
410
....*....|....*..
gi 1614229687 1118 QHEVNEQLQARIKSLEK 1134
Cdd:pfam15921 463 VSSLTAQLESTKEMLRK 479
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
334-571 |
1.03e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.91 E-value: 1.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 334 PLGALAGQAELTRKMEELQKKLDEEVKKRQKLEPSRVGLERQLEEKAEECHRLQELLERRKGEVQQSSKELQNmklLLGQ 413
Cdd:COG4942 15 AAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAE---LEKE 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 414 EEGLRHGLEAQVKELQLKLKHSQSpdSGKESLLKDLLDTRELLEELLEGkQRVEEQLRLRERELTALKGALkeevashdQ 493
Cdd:COG4942 92 IAELRAELEAQKEELAELLRALYR--LGRQPPLALLLSPEDFLDAVRRL-QYLKYLAPARREQAEELRADL--------A 160
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1614229687 494 EVEHVRLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEETghwqSMFQKNKEELRATKQELLQ 571
Cdd:COG4942 161 ELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAEL----AELQQEAEELEALIARLEA 234
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
698-1009 |
1.03e-04 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 46.49 E-value: 1.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 698 RATVETTLRETQEENDEFRRRILG----LEQQLKEARG-LAEGGEAVEARLRDKVHRLEVEKQQLE-EALNAAREEEGNL 771
Cdd:COG5185 248 LAQTSDKLEKLVEQNTDLRLEKLGenaeSSKRLNENANnLIKQFENTKEKIAEYTKSIDIKKATESlEEQLAAAEAEQEL 327
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 772 AAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRsKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQ 851
Cdd:COG5185 328 EESKRETETGIQNLTAEIEQGQESLTENLEAIKEEIENIVGEVE-LSKSSEELDSFKDTIESTKESLDEIPQNQRGYAQE 406
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 852 LQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERdtarldkelLAQRLQGLEQEAE 931
Cdd:COG5185 407 ILATLEDTLKAADRQIEELQRQIEQATSSNEEVSKLLNELISELNKVMREADEESQSR---------LEEAYDEINRSVR 477
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1614229687 932 NKKRfqddkarqlkSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKD 1009
Cdd:COG5185 478 SKKE----------DLNEELTQIESRVSTLKATLEKLRAKLERQLEGVRSKLDQVAESLKDFMRARGYAHILALENLI 545
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
799-1112 |
1.11e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 46.55 E-value: 1.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 799 LNRALEEEGKQREALRRSKAELEEQKRLLNR-TVDRLNK----ELEQIGDDSKLALQQLQAQMEDYKEKARKEVADAQRQ 873
Cdd:COG3206 96 LERVVDKLNLDEDPLGEEASREAAIERLRKNlTVEPVKGsnviEISYTSPDPELAAAVANALAEAYLEQNLELRREEARK 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 874 AKDWaseaeknsgglsrLQDELQRLRQALQTSQAERDTARLDKELLAqrlqgLEQEAenkkrfqDDKARQLKSLEEKVSR 953
Cdd:COG3206 176 ALEF-------------LEEQLPELRKELEEAEAALEEFRQKNGLVD-----LSEEA-------KLLLQQLSELESQLAE 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 954 LEAELDEEKNTVELLTDRVNRGRDQVDQLrtelmQERSARQDLECDKISLERQNKDLKTRlassegFQKPSASLSQLESQ 1033
Cdd:COG3206 231 ARAELAEAEARLAALRAQLGSGPDALPEL-----LQSPVIQQLRAQLAELEAELAELSAR------YTPNHPDVIALRAQ 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1034 NQLLQERLQAEEREKTV-LQSTNRKLERRVKELSIQIDDERQHVNDQKdQLTLRVKALKRQVDEAEEEIERLDSLRKKAQ 1112
Cdd:COG3206 300 IAALRAQLQQEAQRILAsLEAELEALQAREASLQAQLAQLEARLAELP-ELEAELRRLEREVEVARELYESLLQRLEEAR 378
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
484-1164 |
1.20e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 46.58 E-value: 1.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 484 LKEEVASHDQEVE--HVRLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEETGHWQSMFQKNKEE 561
Cdd:TIGR00606 191 LRQVRQTQGQKVQehQMELKYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPLKNRLKEIEHNLSKIMKLDNE 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 562 LRA---TKQELLQLRMEKEEMEEELGEKMEVLQRDLEQARASTrdthqVEELKKELRRTQGELKELQAEQQ--NQEVTGR 636
Cdd:TIGR00606 271 IKAlksRKKQMEKDNSELELKMEKVFQGTDEQLNDLYHNHQRT-----VREKERELVDCQRELEKLNKERRllNQEKTEL 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 637 HQNQVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVA-------SETEAMVLGQRRATVETTLRETQ 709
Cdd:TIGR00606 346 LVEQGRLQLQADRHQEHIRARDSLIQSLATRLELDGFERGPFSERQIKNFhtlvierQEDEAKTAAQLCADLQSKERLKQ 425
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 710 EENDEFRRRILG-----------LEQQLKEARGLAEGGEAVEARLRDKvhrLEVEKQQLEEALNAAREEEGNLAAAKRAL 778
Cdd:TIGR00606 426 EQADEIRDEKKGlgrtielkkeiLEKKQEELKFVIKELQQLEGSSDRI---LELDQELRKAERELSKAEKNSLTETLKKE 502
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 779 EVRLDEAQ----RGLARLGQEQQALNRALEEEgKQREALRRSKAELEEQKRLLN-RTVDRLNKEL-----EQIGDDSKLA 848
Cdd:TIGR00606 503 VKSLQNEKadldRKLRKLDQEMEQLNHHTTTR-TQMEMLTKDKMDKDEQIRKIKsRHSDELTSLLgyfpnKKQLEDWLHS 581
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 849 LQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQD-------------ELQRLRQALQTSQAERDTARLD 915
Cdd:TIGR00606 582 KSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDklfdvcgsqdeesDLERLKEEIEKSSKQRAMLAGA 661
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 916 KELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQD 995
Cdd:TIGR00606 662 TAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDL 741
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 996 LECDKISLERQNKDLKTRLASSEgfqkpsaslSQLESQNQLLqERLQAEEREKTVLQSTNRKLERRVKELS-IQIDDERQ 1074
Cdd:TIGR00606 742 KEKEIPELRNKLQKVNRDIQRLK---------NDIEEQETLL-GTIMPEEESAKVCLTDVTIMERFQMELKdVERKIAQQ 811
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1075 HVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKDAWRKASRSAAESALKQEGL 1154
Cdd:TIGR00606 812 AAKLQGSDLDRTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEEQLV 891
|
730
....*....|
gi 1614229687 1155 SSDEEFDNVY 1164
Cdd:TIGR00606 892 ELSTEVQSLI 901
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
864-1152 |
1.21e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 46.27 E-value: 1.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 864 RKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERdtARLDKE---LLAQRLQGLEQEAENKKRFQDDK 940
Cdd:pfam17380 281 QKAVSERQQQEKFEKMEQERLRQEKEEKAREVERRRKLEEAEKARQ--AEMDRQaaiYAEQERMAMERERELERIRQEER 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 941 ARQLKSLEEKVSRLEAELDEEKNTVELLTDRVN-RGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKT------- 1012
Cdd:pfam17380 359 KRELERIRQEEIAMEISRMRELERLQMERQQKNeRVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEEarqrevr 438
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1013 RLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKE------LSIQIDDERQHVNDQKDQLTLR 1086
Cdd:pfam17380 439 RLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEeqrrkiLEKELEERKQAMIEEERKRKLL 518
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1614229687 1087 VKALK-RQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQL------QARIKSLEKDawRKASRSAAESALKQE 1152
Cdd:pfam17380 519 EKEMEeRQKAIYEEERRREAEEERRKQQEMEERRRIQEQMrkateeRSRLEAMERE--REMMRQIVESEKARA 589
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
715-883 |
1.34e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 45.92 E-value: 1.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 715 FRRRILglEQQLKEARGLAEGgEAVEARLRDKVHRLEVEKQQLEEALNAAREEEgnlaaakRALEVRLDEAQRGLARLGQ 794
Cdd:PRK12704 24 VRKKIA--EAKIKEAEEEAKR-ILEEAKKEAEAIKKEALLEAKEEIHKLRNEFE-------KELRERRNELQKLEKRLLQ 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 795 EQQALNRALE-------EEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGddsklALQQLQAQ---MEDYKEKAR 864
Cdd:PRK12704 94 KEENLDRKLEllekreeELEKKEKELEQKQQELEKKEEELEELIEEQLQELERIS-----GLTAEEAKeilLEKVEEEAR 168
|
170 180
....*....|....*....|
gi 1614229687 865 KEVADAQRQAKDWA-SEAEK 883
Cdd:PRK12704 169 HEAAVLIKEIEEEAkEEADK 188
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
747-1147 |
1.35e-04 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 46.16 E-value: 1.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 747 VHRLEVEKQQLEEALNAAREEEGNLA-AAKRALEVRLDEAQRGLARLGQEQQ-ALNRALEEegKQREALRRSKAELEEQK 824
Cdd:NF033838 35 VHAEEVRGGNNPTVTSSGNESQKEHAkEVESHLEKILSEIQKSLDKRKHTQNvALNKKLSD--IKTEYLYELNVLKEKSE 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 825 -RLLNRTVDRLNKELEQIGDDSklalqqlqAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQ 903
Cdd:NF033838 113 aELTSKTKKELDAAFEQFKKDT--------LEPGKKVAEATKKVEEAEKKAKDQKEEDRRNYPTNTYKTLELEIAESDVE 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 904 TSQAERDTARLDkellAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLR 983
Cdd:NF033838 185 VKKAELELVKEE----AKEPRDEEKIKQAKAKVESKKAEATRLEKIKTDREKAEEEAKRRADAKLKEAVEKNVATSEQDK 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 984 TELMQERSARQDLEcdkiSLERQNKDLKTRLASSEGFQKPSASLSQlesqnqllqerlqaeerEKTVLQSTNRKLERRVK 1063
Cdd:NF033838 261 PKRRAKRGVLGEPA----TPDKKENDAKSSDSSVGEETLPSPSLKP-----------------EKKVAEAEKKVEEAKKK 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1064 ELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEI-------ERLDSLRKKAQRELEEQHEVNEQLQaRIKSLEKDA 1136
Cdd:NF033838 320 AKDQKEEDRRNYPTNTYKTLELEIAESDVKVKEAELELvkeeakePRNEEKIKQAKAKVESKKAEATRLE-KIKTDRKKA 398
|
410
....*....|.
gi 1614229687 1137 WRKASRSAAES 1147
Cdd:NF033838 399 EEEAKRKAAEE 409
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
842-1133 |
1.37e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 45.66 E-value: 1.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 842 GDDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELLAQ 921
Cdd:COG4372 1 GDRLGEKVGKARLSLFGLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 922 RLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKI 1001
Cdd:COG4372 81 ELEELNEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1002 SLERQNKDLKTRLASSEGFQKPSASLSQL-ESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQK 1080
Cdd:COG4372 161 SLQEELAALEQELQALSEAEAEQALDELLkEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLD 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1614229687 1081 DQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLE 1133
Cdd:COG4372 241 ALELEEDKEELLEEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAAL 293
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
809-1034 |
1.42e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 45.59 E-value: 1.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 809 QREALRRSKAELEEQKRLLNRTVDRLNKELEQIG---DDSKLALQQLQAQMEDYKE---KARKEVADAQRQAKDWASEAE 882
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAELDALQAELEELNeeyNELQAELEALQAEIDKLQAeiaEAEAEIEERREELGERARALY 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 883 KNSGGLSRLQDEL--QRLRQALQTSQAERDTARLDKELLAQrLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDE 960
Cdd:COG3883 97 RSGGSVSYLDVLLgsESFSDFLDRLSALSKIADADADLLEE-LKADKAELEAKKAELEAKLAELEALKAELEAAKAELEA 175
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1614229687 961 EKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKPSASLSQLESQN 1034
Cdd:COG3883 176 QQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAASAAGA 249
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
501-1133 |
2.24e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 45.49 E-value: 2.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 501 QYQRDTEQLRRSMQDATQDHaaLEAERQKMSSLVRELQRELEETSEetghwqsMFQKNKEELRatkQELLQLRMEKEEME 580
Cdd:pfam15921 56 KYEVELDSPRKIIAYPGKEH--IERVLEEYSHQVKDLQRRLNESNE-------LHEKQKFYLR---QSVIDLQTKLQEMQ 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 581 eelgekmevLQRDlEQARASTRDTHQVEELKKELRRTQGELKELQAEQqnqevtgrhqnqvlEKQLAALREEADRGRELE 660
Cdd:pfam15921 124 ---------MERD-AMADIRRRESQSQEDLRNQLQNTVHELEAAKCLK--------------EDMLEDSNTQIEQLRKMM 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 661 QQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRR--ATVETTLRETQEENDEFRRRILGLEQQLkearglaeggEA 738
Cdd:pfam15921 180 LSHEGVLQEIRSILVDFEEASGKKIYEHDSMSTMHFRSlgSAISKILRELDTEISYLKGRIFPVEDQL----------EA 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 739 VEARLRDKVHRLEVEKQQLEEALNAAREeegnlaaakralevrldeaqrglarlgQEQQALNRALEEEGKQREALRRSKA 818
Cdd:pfam15921 250 LKSESQNKIELLLQQHQDRIEQLISEHE---------------------------VEITGLTEKASSARSQANSIQSQLE 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 819 ELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRL 898
Cdd:pfam15921 303 IIQEQARNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKL 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 899 RQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAE----LDEEKNTVELLTDRVNR 974
Cdd:pfam15921 383 LADLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSEcqgqMERQMAAIQGKNESLEK 462
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 975 GRDQVDQLRTELMQERSARQDLECDKISL---ERQNKDLKTRLASSE-GFQKPSASLSQLESQNQLLQERLQAEEREKTV 1050
Cdd:pfam15921 463 VSSLTAQLESTKEMLRKVVEELTAKKMTLessERTVSDLTASLQEKErAIEATNAEITKLRSRVDLKLQELQHLKNEGDH 542
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1051 LQSTNRKLERRVKELSiQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIK 1130
Cdd:pfam15921 543 LRNVQTECEALKLQMA-EKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQEFKILKDKKDAKIR 621
|
...
gi 1614229687 1131 SLE 1133
Cdd:pfam15921 622 ELE 624
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
891-1014 |
2.39e-04 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 44.57 E-value: 2.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 891 LQDELQRLRQALQTSQAERDtarldkellaqRLQGLEQEAenkkrfqddkARQLKSLEEKVSRLEAELDEEKNTVELLTD 970
Cdd:PRK09039 79 LQDSVANLRASLSAAEAERS-----------RLQALLAEL----------AGAGAAAEGRAGELAQELDSEKQVSARALA 137
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 1614229687 971 RVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRL 1014
Cdd:PRK09039 138 QVELLNQQIAALRRQLAALEAALDASEKRDRESQAKIADLGRRL 181
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
705-1127 |
2.54e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 45.34 E-value: 2.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 705 LRETQEENDEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDE 784
Cdd:TIGR00618 158 LKAKSKEKKELLMNLFPLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQ 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 785 AQRGLARLGQEQQALnralEEEGKQREALRRSKAELEEQKRLLNRtVDRLNKELEQIGDDSKLALQqlQAQMEDYKEKAR 864
Cdd:TIGR00618 238 TQQSHAYLTQKREAQ----EEQLKKQQLLKQLRARIEELRAQEAV-LEETQERINRARKAAPLAAH--IKAVTQIEQQAQ 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 865 KEVADAQRQAKDWASEAEKNSGGLSRlQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQdDKARQL 944
Cdd:TIGR00618 311 RIHTELQSKMRSRAKLLMKRAAHVKQ-QSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIH-TLQQQK 388
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 945 KSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKPS 1024
Cdd:TIGR00618 389 TTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSL 468
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1025 ASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVnDQKDQLTLRVKALKRQVDEAEEEIER- 1103
Cdd:TIGR00618 469 KEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDI-DNPGPLTRRMQRGEQTYAQLETSEEDv 547
|
410 420
....*....|....*....|....*..
gi 1614229687 1104 ---LDSLRKKAQRELEEQHEVNEQLQA 1127
Cdd:TIGR00618 548 yhqLTSERKQRASLKEQMQEIQQSFSI 574
|
|
| Golgin_A5 |
pfam09787 |
Golgin subfamily A member 5; Members of this family of proteins are involved in maintaining ... |
954-1116 |
2.61e-04 |
|
Golgin subfamily A member 5; Members of this family of proteins are involved in maintaining Golgi structure. They stimulate the formation of Golgi stacks and ribbons, and are involved in intra-Golgi retrograde transport. Two main interactions have been characterized: one with RAB1A that has been activated by GTP-binding and another with isoform CASP of CUTL1.
Pssm-ID: 462900 [Multi-domain] Cd Length: 305 Bit Score: 44.36 E-value: 2.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 954 LEAELDEEKNTVELLTDRVNRGRDQVDQLRTElMQERSARQDLECDkiSLERQNKDLKTRLASSegFQKPSASLSQLESQ 1033
Cdd:pfam09787 45 LTLELEELRQERDLLREEIQKLRGQIQQLRTE-LQELEAQQQEEAE--SSREQLQELEEQLATE--RSARREAEAELERL 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1034 NQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDeRQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQR 1113
Cdd:pfam09787 120 QEELRYLEEELRRSKATLQSRIKDREAEIEKLRNQLTS-KSQSSSSQSELENRLHQLTETLIQKQTMLEALSTEKNSLVL 198
|
...
gi 1614229687 1114 ELE 1116
Cdd:pfam09787 199 QLE 201
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
791-961 |
2.76e-04 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 45.20 E-value: 2.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 791 RLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLL---NRTVDRLNKELEQIGDDSKLALQQLQAQMEDYKEKARKEV 867
Cdd:PRK00409 496 RLGLPENIIEEAKKLIGEDKEKLNELIASLEELERELeqkAEEAEALLKEAEKLKEELEEKKEKLQEEEDKLLEEAEKEA 575
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 868 ADAQRQAKdwaSEAEKnsgglsrLQDELQRLRQALQTSQAERDTARLDKElLAQRLQGLEQEAENKKRFQD-----DKAR 942
Cdd:PRK00409 576 QQAIKEAK---KEADE-------IIKELRQLQKGGYASVKAHELIEARKR-LNKANEKKEKKKKKQKEKQEelkvgDEVK 644
|
170
....*....|....*....
gi 1614229687 943 qLKSLEEKVSRLEAELDEE 961
Cdd:PRK00409 645 -YLSLGQKGEVLSIPDDKE 662
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
341-1135 |
2.82e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 45.42 E-value: 2.82e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 341 QAELTRKMEELQKKLDEEVKKrqkLEPSRVGLERQLEEKAEECHRLQELLERRKGEVQQSSKELQN------MKLLLGQE 414
Cdd:TIGR00606 285 NSELELKMEKVFQGTDEQLND---LYHNHQRTVREKERELVDCQRELEKLNKERRLLNQEKTELLVeqgrlqLQADRHQE 361
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 415 EGLRHGLEAQVKELQLKLKH-SQSPDSGKESLLKDLLDTRELLEELLEGKQ---RVEEQLRLRERELTALKGALKEEVAS 490
Cdd:TIGR00606 362 HIRARDSLIQSLATRLELDGfERGPFSERQIKNFHTLVIERQEDEAKTAAQlcaDLQSKERLKQEQADEIRDEKKGLGRT 441
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 491 HDQEVEHVRlQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEETGHWQSMFQKNKE-----ELRAT 565
Cdd:TIGR00606 442 IELKKEILE-KKQEELKFVIKELQQLEGSSDRILELDQELRKAERELSKAEKNSLTETLKKEVKSLQNEKadldrKLRKL 520
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 566 KQELLQLRMEKEEMEEELGEKMEVLQRDLEQARASTRDTHQV-----------------EELKKELRRTQGELKELQAEQ 628
Cdd:TIGR00606 521 DQEMEQLNHHTTTRTQMEMLTKDKMDKDEQIRKIKSRHSDELtsllgyfpnkkqledwlHSKSKEINQTRDRLAKLNKEL 600
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 629 QNQEVTGRHQNQVLEKQLAALREEADRGRELeqqnlqlqKTLQQLRQDCEEASKAKVASETEAMVLGQRRATVETTLRET 708
Cdd:TIGR00606 601 ASLEQNKNHINNELESKEEQLSSYEDKLFDV--------CGSQDEESDLERLKEEIEKSSKQRAMLAGATAVYSQFITQL 672
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 709 QEENDE---FRRRILGLEQQLKEarglaeggeaVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEA 785
Cdd:TIGR00606 673 TDENQSccpVCQRVFQTEAELQE----------FISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLK 742
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 786 QRGLARLGQEQQALNRALEEE----GKQREALRRSKAELEEQKRLLNRT--VDRLNKELEQIgdDSKLALQQLQAQMEDY 859
Cdd:TIGR00606 743 EKEIPELRNKLQKVNRDIQRLkndiEEQETLLGTIMPEEESAKVCLTDVtiMERFQMELKDV--ERKIAQQAAKLQGSDL 820
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 860 K---EKARKEVADAQRQAKDWASEAEKNSgglsRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRF 936
Cdd:TIGR00606 821 DrtvQQVNQEKQEKQHELDTVVSKIELNR----KLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEEQLVELSTE 896
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 937 QDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVN----RGRDQVDQLRTELMQERSARQDLECD-KISLERQNKDLK 1011
Cdd:TIGR00606 897 VQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKEtsnkKAQDKVNDIKEKVKNIHGYMKDIENKiQDGKDDYLKQKE 976
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1012 TRLAssegfqKPSASLSQLESQNQllqerlqaeerektvlqstnrKLERRVKELSIQIDDERQHVNDQKDQLTLRvkalK 1091
Cdd:TIGR00606 977 TELN------TVNAQLEECEKHQE---------------------KINEDMRLMRQDIDTQKIQERWLQDNLTLR----K 1025
|
810 820 830 840
....*....|....*....|....*....|....*....|....
gi 1614229687 1092 RQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKD 1135
Cdd:TIGR00606 1026 RENELKEVEEELKQHLKEMGQMQVLQMKQEHQKLEENIDLIKRN 1069
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
525-1095 |
2.90e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 45.21 E-value: 2.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 525 AERQKMSSLVRELQ--RELEETSEETGHWQSMFqKNKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQARASTR 602
Cdd:pfam12128 218 LNRQQVEHWIRDIQaiAGIMKIRPEFTKLQQEF-NTLESAELRLSHLHFGYKSDETLIASRQEERQETSAELNQLLRTLD 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 603 DthQVEELKKELRrtqGELKELQAEQQNQevtgRHQNQVLEKQLAALREEADRGRELEQQNLQLQKTlqqlrqDCEEASK 682
Cdd:pfam12128 297 D--QWKEKRDELN---GELSAADAAVAKD----RSELEALEDQHGAFLDADIETAAADQEQLPSWQS------ELENLEE 361
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 683 akvasETEAMVLGQRRATVETTLREtQEENDEFRRRILGLEQQLKEARGLAEGGEAVEarlRDKVHRLEVE-KQQLEEAL 761
Cdd:pfam12128 362 -----RLKALTGKHQDVTAKYNRRR-SKIKEQNNRDIAGIKDKLAKIREARDRQLAVA---EDDLQALESElREQLEAGK 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 762 NAAREEEGNLAAAKRALEVRLDEAQ---RGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKEl 838
Cdd:pfam12128 433 LEFNEEEYRLKSRLGELKLRLNQATatpELLLQLENFDERIERAREEQEAANAEVERLQSELRQARKRRDQASEALRQA- 511
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 839 EQIGDDSKLALQQLQAQMEdykEKARKEVADAQRQAKDWaseaeknSGGLSRLQDELQRLRQALQTSQAERDTARlDKEL 918
Cdd:pfam12128 512 SRRLEERQSALDELELQLF---PQAGTLLHFLRKEAPDW-------EQSIGKVISPELLHRTDLDPEVWDGSVGG-ELNL 580
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 919 LAQRLQgLEQEAENKKRFQDDkarqlkSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLEC 998
Cdd:pfam12128 581 YGVKLD-LKRIDVPEWAASEE------ELRERLDKAEEALQSAREKQAAAEEQLVQANGELEKASREETFARTALKNARL 653
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 999 DKISL--ERQNKDLKTRLASSEGFQKPSASLSQLESQNQLLQERLQA--EEREKTVLQSTNRKLERR---VKELSIQIDD 1071
Cdd:pfam12128 654 DLRRLfdEKQSEKDKKNKALAERKDSANERLNSLEAQLKQLDKKHQAwlEEQKEQKREARTEKQAYWqvvEGALDAQLAL 733
|
570 580
....*....|....*....|....
gi 1614229687 1072 ERQHVNDQKDQLTLRVKALKRQVD 1095
Cdd:pfam12128 734 LKAAIAARRSGAKAELKALETWYK 757
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
754-1046 |
3.30e-04 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 45.04 E-value: 3.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 754 KQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNraleEEGKQREALRRSKAELEEQKRLL--NRTV 831
Cdd:PRK10929 29 TQELEQAKAAKTPAQAEIVEALQSALNWLEERKGSLERAKQYQQVID----NFPKLSAELRQQLNNERDEPRSVppNMST 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 832 DRLNKELEQIGddSKLALQQLQAQMEdyKEKARkEVADAQRQAKDWASEAeknsgglSRLQDELQRLRQALQTSQAErdt 911
Cdd:PRK10929 105 DALEQEILQVS--SQLLEKSRQAQQE--QDRAR-EISDSLSQLPQQQTEA-------RRQLNEIERRLQTLGTPNTP--- 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 912 arldkellaqrlqgLEQEaenkkrfqddkarQLKSLEEKVSRLEAELDEekntVELLTDRVNRgRDQVDQLRTELMQERS 991
Cdd:PRK10929 170 --------------LAQA-------------QLTALQAESAALKALVDE----LELAQLSANN-RQELARLRSELAKKRS 217
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1614229687 992 ARQDLECDKI-----SLERQNKDL---KTRLASSEGFQKPSASLSQLESQNQLLQERLQAEER 1046
Cdd:PRK10929 218 QQLDAYLQALrnqlnSQRQREAERaleSTELLAEQSGDLPKSIVAQFKINRELSQALNQQAQR 280
|
|
| PRK04778 |
PRK04778 |
septation ring formation regulator EzrA; Provisional |
755-1104 |
3.82e-04 |
|
septation ring formation regulator EzrA; Provisional
Pssm-ID: 179877 [Multi-domain] Cd Length: 569 Bit Score: 44.44 E-value: 3.82e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 755 QQLEEALNAAREEegNLAAAKRALevrlDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVD-- 832
Cdd:PRK04778 86 EQLFEAEELNDKF--RFRKAKHEI----NEIESLLDLIEEDIEQILEELQELLESEEKNREEVEQLKDLYRELRKSLLan 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 833 -----RLNKELEQigddsklALQQLQAQMEDYKE--------KARKEVADAQRQAKDWASEAEKNSGGLSRLQ----DEL 895
Cdd:PRK04778 160 rfsfgPALDELEK-------QLENLEEEFSQFVEltesgdyvEAREILDQLEEELAALEQIMEEIPELLKELQtelpDQL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 896 QRLRQALQtsQAERDTARLDKELLAQRLQGLEQEAENKKrfQDDKARQLKSLEEKVSRLEAELD----------EEKNTV 965
Cdd:PRK04778 233 QELKAGYR--ELVEEGYHLDHLDIEKEIQDLKEQIDENL--ALLEELDLDEAEEKNEEIQERIDqlydilerevKARKYV 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 966 EL----LTDRVNRGRDQVDQLRTELMQ----------ERSARQDLECDKISLERQNKDLKTRLASSEG--------FQKP 1023
Cdd:PRK04778 309 EKnsdtLPDFLEHAKEQNKELKEEIDRvkqsytlnesELESVRQLEKQLESLEKQYDEITERIAEQEIayselqeeLEEI 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1024 SASLSQLESQNQLLQERLQA---EERE--------KTVLQSTNRKLERR--------VKELSIQIDDERQHVNDQKDQLT 1084
Cdd:PRK04778 389 LKQLEEIEKEQEKLSEMLQGlrkDELEarekleryRNKLHEIKRYLEKSnlpglpedYLEMFFEVSDEIEALAEELEEKP 468
|
410 420
....*....|....*....|
gi 1614229687 1085 LRVKALKRQVDEAEEEIERL 1104
Cdd:PRK04778 469 INMEAVNRLLEEATEDVETL 488
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
950-1118 |
3.95e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 43.37 E-value: 3.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 950 KVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKPSASLSQ 1029
Cdd:COG1579 11 DLQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNKE 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1030 LESqnqlLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRK 1109
Cdd:COG1579 91 YEA----LQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAERE 166
|
....*....
gi 1614229687 1110 KAQRELEEQ 1118
Cdd:COG1579 167 ELAAKIPPE 175
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
312-1143 |
4.05e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 44.65 E-value: 4.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 312 EGSSESEASVRRKVSLVLEQMQPLGALAGQaeltrKMEELQKKLDEEVKKRQKLEPSRVGLERQLEEKAEECHRLQELLE 391
Cdd:TIGR00606 383 ERGPFSERQIKNFHTLVIERQEDEAKTAAQ-----LCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELK 457
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 392 RRKGEVQQSSKelqNMKLLLGQEEGLRHGLeaqvKELQLKLKHSQSpdsgkESLLKDLLDTRELLEELLEGKQRVEEQLR 471
Cdd:TIGR00606 458 FVIKELQQLEG---SSDRILELDQELRKAE----RELSKAEKNSLT-----ETLKKEVKSLQNEKADLDRKLRKLDQEME 525
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 472 LRERELTALKG--ALKEEVASHDQEVEHVRLQYQRDTEQLRRSMQDATQDHAALEA---ERQKMSSLVRELQRELEETSE 546
Cdd:TIGR00606 526 QLNHHTTTRTQmeMLTKDKMDKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSkskEINQTRDRLAKLNKELASLEQ 605
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 547 ETGHWqsmfqkNKEELRATKQELlqlrmekeemeeelgekmeVLQRDLEQARASTRDTHQVEELKKELRRTQGELKELQA 626
Cdd:TIGR00606 606 NKNHI------NNELESKEEQLS-------------------SYEDKLFDVCGSQDEESDLERLKEEIEKSSKQRAMLAG 660
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 627 -----EQQNQEVTGRHQN--QVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRA 699
Cdd:TIGR00606 661 atavySQFITQLTDENQSccPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIID 740
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 700 TVETTLRETQEENDEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEAlnaareEEGNLAAAKRALE 779
Cdd:TIGR00606 741 LKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQMEL------KDVERKIAQQAAK 814
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 780 VRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDdsklALQQLQaQMEDY 859
Cdd:TIGR00606 815 LQGSDLDRTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGT----NLQRRQ-QFEEQ 889
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 860 KEKARKEVADAQRQAKDwasEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAEN-KKRFQD 938
Cdd:TIGR00606 890 LVELSTEVQSLIREIKD---AKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDiENKIQD 966
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 939 DKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDqlrTELMQERSARQDLECDKIslERQNKDLKTRLASSE 1018
Cdd:TIGR00606 967 GKDDYLKQKETELNTVNAQLEECEKHQEKINEDMRLMRQDID---TQKIQERWLQDNLTLRKR--ENELKEVEEELKQHL 1041
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1019 GfQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLRVKALkrqvdeAE 1098
Cdd:TIGR00606 1042 K-EMGQMQVLQMKQEHQKLEENIDLIKRNHVLALGRQKGYEKEIKHFKKELREPQFRDAEEKYREMMIVMRT------TE 1114
|
810 820 830 840
....*....|....*....|....*....|....*....|....*
gi 1614229687 1099 EEIERLDSLRKKAQRELEEQHEVNeqlQARIKSLEKDAWRKASRS 1143
Cdd:TIGR00606 1115 LVNKDLDIYYKTLDQAIMKFHSMK---MEEINKIIRDLWRSTYRG 1156
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
678-1015 |
6.04e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 43.74 E-value: 6.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 678 EEASKAKVASETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQL 757
Cdd:COG4372 6 EKVGKARLSLFGLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEEL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 758 EEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKE 837
Cdd:COG4372 86 NEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEE 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 838 LEQIGddsklalQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKE 917
Cdd:COG4372 166 LAALE-------QELQALSEAEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSAL 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 918 LLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLE 997
Cdd:COG4372 239 LDALELEEDKEELLEEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALL 318
|
330
....*....|....*...
gi 1614229687 998 CDKISLERQNKDLKTRLA 1015
Cdd:COG4372 319 AALLELAKKLELALAILL 336
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
595-1135 |
6.78e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 44.19 E-value: 6.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 595 EQARASTRDTHQVEELKKELRRTQGELKELQAEQQNQEVTGRhqNQVLEKQLAALREEADRGRELEQQNLQLQKtlqqlr 674
Cdd:TIGR00618 179 TQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHER--KQVLEKELKHLREALQQTQQSHAYLTQKRE------ 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 675 qDCEEASKAKVAseteamvLGQRRATVEtTLRETQEENDEFRRRIlglEQQLKEARgLAEGGEAVEaRLRDKVHRLEVEK 754
Cdd:TIGR00618 251 -AQEEQLKKQQL-------LKQLRARIE-ELRAQEAVLEETQERI---NRARKAAP-LAAHIKAVT-QIEQQAQRIHTEL 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 755 QQLEEALNAAREEEGNLAAAKRALEvrldEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLlnRTVDRL 834
Cdd:TIGR00618 317 QSKMRSRAKLLMKRAAHVKQQSSIE----EQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTL--QQQKTT 390
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 835 NKELEQIGDDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARL 914
Cdd:TIGR00618 391 LTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKE 470
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 915 DKELLAQRLQGLEQEAENKK---RFQDDKARQLKSLEEKVSRLEAELDEEKNTvELLTDRVNRGRDQVDQLRTELMQERS 991
Cdd:TIGR00618 471 REQQLQTKEQIHLQETRKKAvvlARLLELQEEPCPLCGSCIHPNPARQDIDNP-GPLTRRMQRGEQTYAQLETSEEDVYH 549
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 992 ARQDLECDKISLERQNKDLK-TRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRvKELSIQID 1070
Cdd:TIGR00618 550 QLTSERKQRASLKEQMQEIQqSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRK-LQPEQDLQ 628
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1614229687 1071 DERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNE--QLQARIKSLEKD 1135
Cdd:TIGR00618 629 DVRLHLQQCSQELALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLAlqKMQSEKEQLTYW 695
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
1030-1144 |
6.95e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 43.61 E-value: 6.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1030 LESQNQLLQERLQAEeREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRK 1109
Cdd:PRK12704 60 LEAKEEIHKLRNEFE-KELRERRNELQKLEKRLLQKEENLDRKLELLEKREEELEKKEKELEQKQQELEKKEEELEELIE 138
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 1614229687 1110 KAQRELEE-----------------QHEVNEQLQARIKSLEKDAWRKASRSA 1144
Cdd:PRK12704 139 EQLQELERisgltaeeakeillekvEEEARHEAAVLIKEIEEEAKEEADKKA 190
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
590-814 |
8.60e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 43.47 E-value: 8.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 590 LQRDLEQARASTRDT-----HQVEELKKELRRTQGELKELQaeQQNQEVTGRHQNQVLEKQLAALREEADRGReLEQQNL 664
Cdd:COG3206 162 LEQNLELRREEARKAlefleEQLPELRKELEEAEAALEEFR--QKNGLVDLSEEAKLLLQQLSELESQLAEAR-AELAEA 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 665 QLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARglaeggEAVEARLR 744
Cdd:COG3206 239 EARLAALRAQLGSGPDALPELLQSPVIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALR------AQLQQEAQ 312
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 745 DKVHRLEVEKQQLEEALNAAREEegnLAAAKRALEvRLDEAQRGLARLGQEQQALNRALEEEGKQREALR 814
Cdd:COG3206 313 RILASLEAELEALQAREASLQAQ---LAQLEARLA-ELPELEAELRRLEREVEVARELYESLLQRLEEAR 378
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
607-1066 |
1.00e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 43.41 E-value: 1.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 607 VEELKKELRRTQGELKELQAEQQN-QEVTGRHQNQVlekqlAA--LREEADRGRELEQQNlqlqktlqqlrqdceEASKA 683
Cdd:PRK04863 235 MEAALRENRMTLEAIRVTQSDRDLfKHLITESTNYV-----AAdyMRHANERRVHLEEAL---------------ELRRE 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 684 KVASETEamvlgqrRATVETTLRETQEENDEFRRRILGLEQQLK----------EARGLAEGGEAVEARLRDKVHRLEVE 753
Cdd:PRK04863 295 LYTSRRQ-------LAAEQYRLVEMARELAELNEAESDLEQDYQaasdhlnlvqTALRQQEKIERYQADLEELEERLEEQ 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 754 KQQLEEalnaAREEEGNLAAAKRALEVRLDEAQRGLA-----------RLGQEQQALnRALEEEGK--QREALRRSKAE- 819
Cdd:PRK04863 368 NEVVEE----ADEQQEENEARAEAAEEEVDELKSQLAdyqqaldvqqtRAIQYQQAV-QALERAKQlcGLPDLTADNAEd 442
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 820 -LEEQKRLLNRTVDRLNkELEQIGDDSKLALQQLQAQMedykEKARKEVADAQR-QAKDWASEAEKNSGGLSRLQDELQR 897
Cdd:PRK04863 443 wLEEFQAKEQEATEELL-SLEQKLSVAQAAHSQFEQAY----QLVRKIAGEVSRsEAWDVARELLRRLREQRHLAEQLQQ 517
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 898 LRQAL----QTSQAERDTARLDKELLAQRLQGLEQEAEnkkrfqddkarqlksLEEKVSRLEAELDEEKNTVELLTDRVN 973
Cdd:PRK04863 518 LRMRLseleQRLRQQQRAERLLAEFCKRLGKNLDDEDE---------------LEQLQEELEARLESLSESVSEARERRM 582
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 974 RGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEgfqkpsaslsQLESQNQLLQERLQAEEREKTVLQS 1053
Cdd:PRK04863 583 ALRQQLEQLQARIQRLAARAPAWLAAQDALARLREQSGEEFEDSQ----------DVTEYMQQLLERERELTVERDELAA 652
|
490
....*....|...
gi 1614229687 1054 TNRKLERRVKELS 1066
Cdd:PRK04863 653 RKQALDEEIERLS 665
|
|
| EzrA |
pfam06160 |
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like ... |
713-1106 |
1.06e-03 |
|
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerizes into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation. The structure contains 5 spectrin like alpha helical repeats.
Pssm-ID: 428797 [Multi-domain] Cd Length: 542 Bit Score: 42.92 E-value: 1.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 713 DEFRRRILGLEQQLKEARGLAEGGEAVEARlrDKVHRLEVEKQQLEEALNAAREEegnLAAAKRALEVRLDEAQRGLARL 792
Cdd:pfam06160 149 DELEKQLAEIEEEFSQFEELTESGDYLEAR--EVLEKLEEETDALEELMEDIPPL---YEELKTELPDQLEELKEGYREM 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 793 GQEQQAL-NRALEEEGKQ-REALRRSKAELEEQKrllnrtVDRLNKELEQIGDDsklaLQQLQAQMEdyKE-KARKEVAD 869
Cdd:pfam06160 224 EEEGYALeHLNVDKEIQQlEEQLEENLALLENLE------LDEAEEALEEIEER----IDQLYDLLE--KEvDAKKYVEK 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 870 AQRQAKDWASEAEKNSgglSRLQDELQRLRQALQTSQAErdtarldkellAQRLQGLEqeaenkkrfqddkaRQLKSLEE 949
Cdd:pfam06160 292 NLPEIEDYLEHAEEQN---KELKEELERVQQSYTLNENE-----------LERVRGLE--------------KQLEELEK 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 950 KVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLrtelmqersarqdlecdkislERQNKDLKTRLASsegfqkpsaslsq 1029
Cdd:pfam06160 344 RYDEIVERLEEKEVAYSELQEELEEILEQLEEI---------------------EEEQEEFKESLQS------------- 389
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1030 LESQNQLLQERLQaeeREKTVLQSTNRKLERR--------VKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEI 1101
Cdd:pfam06160 390 LRKDELEAREKLD---EFKLELREIKRLVEKSnlpglpesYLDYFFDVSDEIEDLADELNEVPLNMDEVNRLLDEAQDDV 466
|
....*
gi 1614229687 1102 ERLDS 1106
Cdd:pfam06160 467 DTLYE 471
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
701-912 |
1.25e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.51 E-value: 1.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 701 VETTLRETQEENDEFRRRILGLEQQLKEARGLAEggeaveaRLRDKVHRLEVEKQQLEEALNAAREEegnLAAAKRALEV 780
Cdd:COG3883 21 KQKELSELQAELEAAQAELDALQAELEELNEEYN-------ELQAELEALQAEIDKLQAEIAEAEAE---IEERREELGE 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 781 RLDEAQRGLARLG---------------QEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIgDDS 845
Cdd:COG3883 91 RARALYRSGGSVSyldvllgsesfsdflDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAEL-EAA 169
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1614229687 846 KLALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTA 912
Cdd:COG3883 170 KAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAA 236
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
911-1148 |
1.50e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.51 E-value: 1.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 911 TARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELmqER 990
Cdd:COG3883 13 FADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREEL--GE 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 991 SARQdlecdkISLERQNKDLKTRLASSEGFQ---KPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSI 1067
Cdd:COG3883 91 RARA------LYRSGGSVSYLDVLLGSESFSdflDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKA 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1068 QIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKDAWRKASRSAAES 1147
Cdd:COG3883 165 ELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 244
|
.
gi 1614229687 1148 A 1148
Cdd:COG3883 245 S 245
|
|
| PRK12705 |
PRK12705 |
hypothetical protein; Provisional |
1005-1144 |
1.75e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 237178 [Multi-domain] Cd Length: 508 Bit Score: 42.39 E-value: 1.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1005 RQNKDLKTRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRkLERRVKELSIQIDDERQHVNDQKDQLT 1084
Cdd:PRK12705 30 RLAKEAERILQEAQKEAEEKLEAALLEAKELLLRERNQQRQEARREREELQR-EEERLVQKEEQLDARAEKLDNLENQLE 108
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1085 LRVKALKRQVDEAEEEIERLD-------SLRKKAQREL---EEQHEVNEQLQARIKSLEKDAWRKASRSA 1144
Cdd:PRK12705 109 EREKALSARELELEELEKQLDnelyrvaGLTPEQARKLllkLLDAELEEEKAQRVKKIEEEADLEAERKA 178
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
852-974 |
2.10e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 42.15 E-value: 2.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 852 LQAQMEDYKEKARKEvadAQRQAKDWASEAEKNSGGLSRLQDELQRLRQalQTSQAERDTARLDKEL--LAQRLQGLEQE 929
Cdd:COG2433 382 LEELIEKELPEEEPE---AEREKEHEERELTEEEEEIRRLEEQVERLEA--EVEELEAELEEKDERIerLERELSEARSE 456
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1614229687 930 AENKKRfqddKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNR 974
Cdd:COG2433 457 ERREIR----KDREISRLDREIERLERELEEERERIEELKRKLER 497
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
804-1123 |
2.11e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 42.20 E-value: 2.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 804 EEEGKQREALRRSKAELEEQKRLLNrTVDRLNKELEQIGDDSKLAL---QQLQAQMEDYKEKARKEVADAQRQAKDWASE 880
Cdd:PRK01156 325 HAIIKKLSVLQKDYNDYIKKKSRYD-DLNNQILELEGYEMDYNSYLksiESLKKKIEEYSKNIERMSAFISEILKIQEID 403
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 881 AEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEA-----------ENKKRFQDDKARQLKSLEE 949
Cdd:PRK01156 404 PDAIKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEMLNGQSvcpvcgttlgeEKSNHIINHYNEKKSRLEE 483
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 950 KVSRLEAE---LDEEKNTVELLTDRVNRGrdQVDQLRTELMQERSARQDLECDKISLER-QNKDLKTRLASSegfQKPSA 1025
Cdd:PRK01156 484 KIREIEIEvkdIDEKIVDLKKRKEYLESE--EINKSINEYNKIESARADLEDIKIKINElKDKHDKYEEIKN---RYKSL 558
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1026 SLSQLESQN----QLLQER----LQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEA 1097
Cdd:PRK01156 559 KLEDLDSKRtswlNALAVIslidIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANNLNNKYNEI 638
|
330 340
....*....|....*....|....*.
gi 1614229687 1098 EEEIERLDSLRKKAQRELEEQHEVNE 1123
Cdd:PRK01156 639 QENKILIEKLRGKIDNYKKQIAEIDS 664
|
|
| DUF4175 |
pfam13779 |
Domain of unknown function (DUF4175); |
705-908 |
2.13e-03 |
|
Domain of unknown function (DUF4175);
Pssm-ID: 463981 [Multi-domain] Cd Length: 833 Bit Score: 42.28 E-value: 2.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 705 LRETQEENDEFRRR------ILGLEQQLKEA-----RGLAE--GGEAVEARLRDKVHRLEVEKQQLEEALNAARE--EEG 769
Cdd:pfam13779 491 LRAAQERLSEALERgasdeeIAKLMQELREAlddymQALAEqaQQNPQDLQQPDDPNAQEMTQQDLQRMLDRIEElaRSG 570
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 770 NLAAAKRalevRLDEAQRGLARL--GQEQQALNRALEEEGKQREALRRSkaeLEEQKRLLNRTVDRLNKELEQIGDDSKL 847
Cdd:pfam13779 571 RRAEAQQ----MLSQLQQMLENLqaGQPQQQQQQGQSEMQQAMDELGDL---LREQQQLLDETFRQLQQQGGQQQGQPGQ 643
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1614229687 848 ALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAE 908
Cdd:pfam13779 644 QGQQGQGQQPGQGGQQPGAQMPPQGGAEALGDLAERQQALRRRLEELQDELKELGGKEPGQ 704
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
965-1140 |
2.15e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.06 E-value: 2.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 965 VELLTDRVNRGRDQVDQLRTELMQERSARQDLEcdkiSLERQNKDLKTRLASSEGFQK---PSASLSQLESQNQLLQERL 1041
Cdd:COG4717 73 LKELEEELKEAEEKEEEYAELQEELEELEEELE----ELEAELEELREELEKLEKLLQllpLYQELEALEAELAELPERL 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1042 QAEEREKTVLQStnrkLERRVKELSIQIDDERQHVNDQKDQLTLrvkALKRQVDEAEEEIERLDSLRKKAQRELEEQHEV 1121
Cdd:COG4717 149 EELEERLEELRE----LEEELEELEAELAELQEELEELLEQLSL---ATEEELQDLAEELEELQQRLAELEEELEEAQEE 221
|
170
....*....|....*....
gi 1614229687 1122 NEQLQARIKSLEKDAWRKA 1140
Cdd:COG4717 222 LEELEEELEQLENELEAAA 240
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
554-931 |
2.23e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 42.19 E-value: 2.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 554 MFQKNKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQARASTRDthQVEELKKELRRTQGELKELQAEQQNQEV 633
Cdd:pfam07888 31 LLQNRLEECLQERAELLQAQEAANRQREKEKERYKRDREQWERQRRELES--RVAELKEELRQSREKHEELEEKYKELSA 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 634 TGRHQNQVLEKQLAALREEADRGRELEQqnlqlqktlqqlrqDCEEASKAKVASETEAMVLGQRRATVETTLRETQEEND 713
Cdd:pfam07888 109 SSEELSEEKDALLAQRAAHEARIRELEE--------------DIKTLTQRVLERETELERMKERAKKAGAQRKEEEAERK 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 714 EFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAK---RALEVRLDEAQRGLA 790
Cdd:pfam07888 175 QLQAKLQQTEEELRSLSKEFQELRNSLAQRDTQVLQLQDTITTLTQKLTTAHRKEAENEALLeelRSLQERLNASERKVE 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 791 RLGQEQQAL----NRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKE---LEQIGDDSKLALQQLQAQMEDYKEKA 863
Cdd:pfam07888 255 GLGEELSSMaaqrDRTQAELHQARLQAAQLTLQLADASLALREGRARWAQEretLQQSAEADKDRIEKLSAELQRLEERL 334
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1614229687 864 RKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAE 931
Cdd:pfam07888 335 QEERMEREKLEVELGREKDCNRVQLSESRRELQELKASLRVAQKEKEQLQAEKQELLEYIRQLEQRLE 402
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
507-841 |
2.69e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 42.25 E-value: 2.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 507 EQLRRSMQDATQDHAALEAERQKMSSLVRELQRELeetseeTGHWQSMFQKNKE-ELRATKQELLQL-----RMEKEEME 580
Cdd:PRK04863 789 EQLRAEREELAERYATLSFDVQKLQRLHQAFSRFI------GSHLAVAFEADPEaELRQLNRRRVELeralaDHESQEQQ 862
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 581 EELGEKMEVLQRDLEQARASTRDTHQVEELKKELRRTQGELKELQAEQQNQEVTGRHQNQvLEKQLAALREEADRGRELE 660
Cdd:PRK04863 863 QRSQLEQAKEGLSALNRLLPRLNLLADETLADRVEEIREQLDEAEEAKRFVQQHGNALAQ-LEPIVSVLQSDPEQFEQLK 941
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 661 QQNLQLQKTLqqlrqdceEASKAKVASETEAMvlgQRRA-----TVETTLRETQEENDEFRRRILGLEQQLKEARglaEG 735
Cdd:PRK04863 942 QDYQQAQQTQ--------RDAKQQAFALTEVV---QRRAhfsyeDAAEMLAKNSDLNEKLRQRLEQAEQERTRAR---EQ 1007
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 736 GEAVEARLRDKVHRLevekQQLEEALNAAREeegNLAAAKRALE---VRLDEAQRGLARLGQEQqaLNRALEEEGKQREA 812
Cdd:PRK04863 1008 LRQAQAQLAQYNQVL----ASLKSSYDAKRQ---MLQELKQELQdlgVPADSGAEERARARRDE--LHARLSANRSRRNQ 1078
|
330 340
....*....|....*....|....*....
gi 1614229687 813 LRRSKAELEEQKRLLNRTVDRLNKELEQI 841
Cdd:PRK04863 1079 LEKQLTFCEAEMDNLTKKLRKLERDYHEM 1107
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
706-968 |
2.74e-03 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 41.96 E-value: 2.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 706 RETQEENDEFRR---RILGLEQQLKEA-RGLAEggeaVEARLRDkvhrLEVEKQQLEEALNAAREEEgnlAAAKRA---- 777
Cdd:PRK10929 123 RQAQQEQDRAREisdSLSQLPQQQTEArRQLNE----IERRLQT----LGTPNTPLAQAQLTALQAE---SAALKAlvde 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 778 LEV--------------RLDEAQRGLARLGQEQQALNRALEEEgKQRE---ALRRSKAELEEQKRLLNRTVD--RLNKEL 838
Cdd:PRK10929 192 LELaqlsannrqelarlRSELAKKRSQQLDAYLQALRNQLNSQ-RQREaerALESTELLAEQSGDLPKSIVAqfKINREL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 839 EQigddsklALQQlQAQMEDykekarkEVADAQRQAkdwASEAEKNSGGLSRLQDELQ------RLRQALQTsQAER--- 909
Cdd:PRK10929 271 SQ-------ALNQ-QAQRMD-------LIASQQRQA---ASQTLQVRQALNTLREQSQwlgvsnALGEALRA-QVARlpe 331
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1614229687 910 --DTARLDKELLAQRLQGLEQEAENKKRFQDDKARQ-----LKSLEEKVsrLEAELDEEKNTVELL 968
Cdd:PRK10929 332 mpKPQQLDTEMAQLRVQRLRYEDLLNKQPQLRQIRQadgqpLTAEQNRI--LDAQLRTQRELLNSL 395
|
|
| ADIP |
pfam11559 |
Afadin- and alpha -actinin-Binding; This family is found in mammals where it is localized at ... |
1003-1104 |
4.01e-03 |
|
Afadin- and alpha -actinin-Binding; This family is found in mammals where it is localized at cell-cell adherens junctions, and in Sch. pombe and other fungi where it anchors spindle-pole bodies to spindle microtubules. It is a coiled-coil structure, and in pombe, it is required for anchoring the minus end of spindle microtubules to the centrosome equivalent, the spindle-pole body. The name ADIP derives from the family being composed of Afadin- and alpha -Actinin-Binding Proteins localized at Cell-Cell Adherens Junctions.
Pssm-ID: 463295 [Multi-domain] Cd Length: 151 Bit Score: 39.22 E-value: 4.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1003 LERQNKDLKTRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQ 1082
Cdd:pfam11559 44 LQQRDRDLEFRESLNETIRTLEAEIERLQSKIERLKTQLEDLERELALLQAKERQLEKKLKTLEQKLKNEKEELQRLKNA 123
|
90 100
....*....|....*....|..
gi 1614229687 1083 LTLRVKALKRQVDEAEEEIERL 1104
Cdd:pfam11559 124 LQQIKTQFAHEVKKRDREIEKL 145
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
707-1080 |
4.02e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 41.43 E-value: 4.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 707 ETQEENDEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQ 786
Cdd:PRK01156 343 KKKSRYDDLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEINVKLQDIS 422
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 787 RGLARLGQEQQALNRALEEEGKQREAL------------------RRSKAELEEQKRLLNRTVDRLNKELEQIgDDSKLA 848
Cdd:PRK01156 423 SKVSSLNQRIRALRENLDELSRNMEMLngqsvcpvcgttlgeeksNHIINHYNEKKSRLEEKIREIEIEVKDI-DEKIVD 501
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 849 LQQLQAQMEdyKEKARKEVADaQRQAKDWASEAEKNSGGLSRLQDelqrlrQALQTSQAERDTARLDKELLAQR----LQ 924
Cdd:PRK01156 502 LKKRKEYLE--SEEINKSINE-YNKIESARADLEDIKIKINELKD------KHDKYEEIKNRYKSLKLEDLDSKrtswLN 572
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 925 GLEQ----EAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQdlecdk 1000
Cdd:PRK01156 573 ALAVisliDIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANNLNNKYNEIQENKILIE------ 646
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1001 iSLERQNKDLKTRLASSEGFQKP----SASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHV 1076
Cdd:PRK01156 647 -KLRGKIDNYKKQIAEIDSIIPDlkeiTSRINDIEDNLKKSRKALDDAKANRARLESTIEILRTRINELSDRINDINETL 725
|
....
gi 1614229687 1077 NDQK 1080
Cdd:PRK01156 726 ESMK 729
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
818-986 |
4.14e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 40.29 E-value: 4.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 818 AELEEQKRLLN-RTVDRLNKELEQIGDDSKLALQQLQAQMEdykeKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQ 896
Cdd:COG1579 1 AMPEDLRALLDlQELDSELDRLEHRLKELPAELAELEDELA----ALEARLEAAKTELEDLEKEIKRLELEIEEVEARIK 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 897 RLRQALQTSQAERDTARLDKEL--LAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNR 974
Cdd:COG1579 77 KYEEQLGNVRNNKEYEALQKEIesLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEA 156
|
170
....*....|..
gi 1614229687 975 GRDQVDQLRTEL 986
Cdd:COG1579 157 ELEELEAEREEL 168
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
342-827 |
4.18e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 41.56 E-value: 4.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 342 AELTRKMEELQKKLDEEVKKRQKLEPSRVGLERQLEEKAEECHRLQELLERRKGEVQQSSKELQNmklLLGQEEGLRHGL 421
Cdd:PRK02224 254 ETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREE---LEDRDEELRDRL 330
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 422 EAQVKELQLKLKHSQSPDSGKESLLKDLLDTRELLEELLEGKQRVEEQLRLRERELTALKGALKE-EVASHDQEVEHVRL 500
Cdd:PRK02224 331 EECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEElRERFGDAPVDLGNA 410
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 501 QYQRdtEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETS--------EETGHWQSMFQKN--KEELRAtkqELL 570
Cdd:PRK02224 411 EDFL--EELREERDELREREAELEATLRTARERVEEAEALLEAGKcpecgqpvEGSPHVETIEEDRerVEELEA---ELE 485
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 571 QLRMEKEEmeeelgekmevLQRDLEQARASTRDTHQVEELkKELRRTQGELKELQAEQQNQEvtgrhqnqvlEKQLAALR 650
Cdd:PRK02224 486 DLEEEVEE-----------VEERLERAEDLVEAEDRIERL-EERREDLEELIAERRETIEEK----------RERAEELR 543
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 651 EEADrgrELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRATVEtTLRETQEENDEFRRRILGLEQQLKEar 730
Cdd:PRK02224 544 ERAA---ELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLE-RIRTLLAAIADAEDEIERLREKREA-- 617
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 731 gLAEGGEAVEARLRDKVHRleveKQQLEEALNAAREEE--GNLAAAKRALEvRLDEAQRGLARLGQEQQALNRALEEEGK 808
Cdd:PRK02224 618 -LAELNDERRERLAEKRER----KRELEAEFDEARIEEarEDKERAEEYLE-QVEEKLDELREERDDLQAEIGAVENELE 691
|
490
....*....|....*....
gi 1614229687 809 QREALRRSKAELEEQKRLL 827
Cdd:PRK02224 692 ELEELRERREALENRVEAL 710
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
736-1100 |
4.97e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 40.66 E-value: 4.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 736 GEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRR 815
Cdd:COG4372 1 GDRLGEKVGKARLSLFGLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 816 SKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQA------QMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLS 889
Cdd:COG4372 81 ELEELNEQLQAAQAELAQAQEELESLQEEAEELQEELEElqkerqDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 890 RLQDELQRLRQALQTSQAERDTARLDkELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLT 969
Cdd:COG4372 161 SLQEELAALEQELQALSEAEAEQALD-ELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 970 DRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKT 1049
Cdd:COG4372 240 DALELEEDKEELLEEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLA 319
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 1614229687 1050 VLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEE 1100
Cdd:COG4372 320 ALLELAKKLELALAILLAELADLLQLLLVGLLDNDVLELLSKGAEAGVADG 370
|
|
| CusB_dom_1 |
pfam00529 |
Cation efflux system protein CusB domain 1; The cation efflux system protein CusB from E. coli ... |
756-922 |
6.99e-03 |
|
Cation efflux system protein CusB domain 1; The cation efflux system protein CusB from E. coli can be divided into four different domains, the first three domains of the protein are mostly beta-strands and the fourth forms an all alpha-helical domain. This entry represents the first beta-domain (domain 1) of CusB and it is formed by the N and C-terminal ends of the polypeptide (residues 89-102 and 324-385). CusB is part of the copper-transporting efflux system CusCFBA. This domain can also be found in other membrane-fusion proteins, such as HlyD, MdtN, MdtE and AaeA. HlyD is a component of the prototypical alpha-haemolysin (HlyA) bacterial type I secretion system, along with the other components HlyB and TolC. HlyD is anchored in the cytoplasmic membrane by a single transmembrane domain and has a large periplasmic domain within the carboxy-terminal 100 amino acids, HlyB and HlyD form a stable complex that binds the recombinant protein bearing a C-terminal HlyA signal sequence and ATP in the cytoplasm. HlyD, HlyB and TolC combine to form the three-component ABC transporter complex that forms a trans-membrane channel or pore through which HlyA can be transferred directly to the extracellular medium. Cutinase has been shown to be transported effectively through this pore.
Pssm-ID: 425733 [Multi-domain] Cd Length: 322 Bit Score: 40.10 E-value: 6.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 756 QLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLN 835
Cdd:pfam00529 55 DYQAALDSAEAQLAKAQAQVARLQAELDRLQALESELAISRQDYDGATAQLRAAQAAVKAAQAQLAQAQIDLARRRVLAP 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 836 keleqIGDDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNsggLSRLQDELQRLRQALQTSQAERDTARLD 915
Cdd:pfam00529 135 -----IGGISRESLVTAGALVAQAQANLLATVAQLDQIYVQITQSAAEN---QAEVRSELSGAQLQIAEAEAELKLAKLD 206
|
....*..
gi 1614229687 916 KELLAQR 922
Cdd:pfam00529 207 LERTEIR 213
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
864-1135 |
7.27e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 40.48 E-value: 7.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 864 RKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELlaqrlqGLEQEAENKKRFQDDKARQ 943
Cdd:pfam05483 161 KETCARSAEKTKKYEYEREETRQVYMDLNNNIEKMILAFEELRVQAENARLEMHF------KLKEDHEKIQHLEEEYKKE 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 944 LKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKP 1023
Cdd:pfam05483 235 INDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMSTQKA 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1024 SASLSQLESQN--QLLQER---LQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAE 1098
Cdd:pfam05483 315 LEEDLQIATKTicQLTEEKeaqMEELNKAKAAHSFVVTEFEATTCSLEELLRTEQQRLEKNEDQLKIITMELQKKSSELE 394
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 1614229687 1099 E----------EIERLDSLRKKAQRELEEQHEVnEQLQARIKSLEKD 1135
Cdd:pfam05483 395 EmtkfknnkevELEELKKILAEDEKLLDEKKQF-EKIAEELKGKEQE 440
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
791-1134 |
7.27e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 40.66 E-value: 7.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 791 RLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDrlNKELEQIGDDSKLALQQLQAQMEDYKEKARKEVADA 870
Cdd:PLN02939 30 RLAVSCRARRRGFSSQQKKKRGKNIAPKQRSSNSKLQSNTDE--NGQLENTSLRTVMELPQKSTSSDDDHNRASMQRDEA 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 871 QRQAKDWASEAEKNSGGLSRLQdeLQRLRQALQTsqAERDTARLDKELLaQRLQGLEQEAENKKRFQddkaRQLKSLEEK 950
Cdd:PLN02939 108 IAAIDNEQQTNSKDGEQLSDFQ--LEDLVGMIQN--AEKNILLLNQARL-QALEDLEKILTEKEALQ----GKINILEMR 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 951 VSRLEAELD---EEKNTVELLtdrvnrgRDQVDQLRTELMQERSArqdlecdkislerqnkdlktrlaSSEGFQKPSASL 1027
Cdd:PLN02939 179 LSETDARIKlaaQEKIHVEIL-------EEQLEKLRNELLIRGAT-----------------------EGLCVHSLSKEL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1028 SQLESQNQLLQ-----------------ERLQAEEREKTVLQSTNRKLERRvkeLSIQIDDERQHVNDQKDQLTLRVKAL 1090
Cdd:PLN02939 229 DVLKEENMLLKddiqflkaelievaeteERVFKLEKERSLLDASLRELESK---FIVAQEDVSKLSPLQYDCWWEKVENL 305
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1091 -------KRQVDEAEEEIERLDSLRKKAQRELEEQHEVN---------EQLQARIKSLEK 1134
Cdd:PLN02939 306 qdlldraTNQVEKAALVLDQNQDLRDKVDKLEASLKEANvskfssykvELLQQKLKLLEE 365
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
942-1161 |
8.21e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 40.44 E-value: 8.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 942 RQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRgRDQVDQLRTELmQERSARQDLEcDKISLERQNKDLKTRLASSEgfq 1021
Cdd:TIGR02169 177 EELEEVEENIERLDLIIDEKRQQLERLRREREK-AERYQALLKEK-REYEGYELLK-EKEALERQKEAIERQLASLE--- 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1022 kpsASLSQLESQNQLLQERLQAEERektVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEI 1101
Cdd:TIGR02169 251 ---EELEKLTEEISELEKRLEEIEQ---LLEELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERL 324
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1102 ERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKdawRKASRSAAESALKQEGLSSDEEFD 1161
Cdd:TIGR02169 325 AKLEAEIDKLLAEIEELEREIEEERKRRDKLTE---EYAELKEELEDLRAELEEVDKEFA 381
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
552-883 |
9.63e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 40.11 E-value: 9.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 552 QSMFQK-NKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRdleQARASTRDTHQVEELKKELRRTQGELKELQAEQQN 630
Cdd:pfam17380 290 QEKFEKmEQERLRQEKEEKAREVERRRKLEEAEKARQAEMDR---QAAIYAEQERMAMERERELERIRQEERKRELERIR 366
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 631 QEvtgrhqnqvlekqlaALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRATVETTLRETQE 710
Cdd:pfam17380 367 QE---------------EIAMEISRMRELERLQMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEE 431
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 711 ENDEFRRRIlgleqqlkearglaeggEAVEARLRDKVHRLEVEKQQLEEALNAAREEEgnlaaAKRALEVRLDEAQRGLA 790
Cdd:pfam17380 432 ARQREVRRL-----------------EEERAREMERVRLEEQERQQQVERLRQQEEER-----KRKKLELEKEKRDRKRA 489
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 791 R------LGQEQQALNRALEEEGKQREALR-----RSKAELEEQKRLLNRTVDRLNKELEQigddsklaLQQLQAQMEDY 859
Cdd:pfam17380 490 EeqrrkiLEKELEERKQAMIEEERKRKLLEkemeeRQKAIYEEERRREAEEERRKQQEMEE--------RRRIQEQMRKA 561
|
330 340
....*....|....*....|....*
gi 1614229687 860 -KEKARKEVADAQRQAKDWASEAEK 883
Cdd:pfam17380 562 tEERSRLEAMEREREMMRQIVESEK 586
|
|
| HAUS5 |
pfam14817 |
HAUS augmin-like complex subunit 5; This family includes HAUS augmin-like complex subunit 5. ... |
822-1134 |
9.71e-03 |
|
HAUS augmin-like complex subunit 5; This family includes HAUS augmin-like complex subunit 5. The HAUS augmin-like complex contributes to mitotic spindle assembly, maintenance of chromosome integrity and completion of cytokinesis.
Pssm-ID: 464332 [Multi-domain] Cd Length: 643 Bit Score: 40.03 E-value: 9.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 822 EQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQmEDYKEKARKEVADAQR-----QAKDWASEAEKN--SGGLSRLQDE 894
Cdd:pfam14817 77 ARRLELQKEIERLRAEISRLDKQLEARELELSRE-EAERERALDEISDSRHrqlllEAYDQQCEEARKilAEDHQRLQGQ 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 895 LQRLRQALQtsQAERDTARLDKELLAQRLQGLEQEAEN------KKRFQDDKARQLKSLEEKVSRLEAELDEEKNTV--- 965
Cdd:pfam14817 156 LQQLRDAAR--KAEKEVVFGDSKGSKSSVIALEPQVLRdvreacELRAQFLQELLESSLKAYEGSGIHMNRDQRRAViqh 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 966 ---ELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKPSASLSQLESQNQLLQERLQ 1042
Cdd:pfam14817 234 wlsAVETLLTSHPPSHLLQALEHLAAREKTAIQEETESLDVRADAEALRFRYESNHLLDVSSDESSDLPSVRQLLERQWA 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229687 1043 AEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDqlTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVN 1122
Cdd:pfam14817 314 HVQQFLNELAETRSRCQQLQARLQGLKDEAELESLGIGD--TSQNDSLLRQVLELELQAAGLAASRDTLRSECQQLNKLA 391
|
330
....*....|..
gi 1614229687 1123 EQLQARIKSLEK 1134
Cdd:pfam14817 392 RERQEALRSLQK 403
|
|
| |
